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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>84338_84338_1_SMURF2-NGFR_SMURF2_chr17_62657946_ENST00000262435_NGFR_chr17_47579424_ENST00000172229_length(amino acids)=491AA_BP=1
MGRQQGHFSLWTGSVVRSEGATRAALTGLWFWGLDSEVLPRGAQFCQAGPPQRVGVRAPQGLAGASVVGMWGGAGAPRLGSHRGCGSGLT
AQTLHEVGSLDAAQGGQEGVQCGAVLGGPACKQGANGAGLMGKGVYVLGLVAQLARQVPPGVPRRAVEKLLHLLPLGWGQAAVEASVTLE
GLARGCLRVGLLVMQALAVHGDATVAVEFFSLWWGRLVHWPAVGSLLVLLAAVPPLEGYVGHKAHNHSSQDGAIDRDEVVGGASGHHGLG
AAHHCGHHTCHRAGYEVLFWRCLRLLGAGGCAVRALWGCGPCNPTARDLLALGVGPACALAELALGVLAHGAGQARVHVVGLVGIRAVGA
LLAHGVLLVLAGEHEARARLAHAARLAAPSRLILVVAVGAAAHGVVGLHARRRHALEPHALGARLARLGRAHHVGERHAVQAGLTHGLVG

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>84338_84338_2_SMURF2-NGFR_SMURF2_chr17_62657947_ENST00000262435_NGFR_chr17_47579425_ENST00000172229_length(amino acids)=491AA_BP=1
MGRQQGHFSLWTGSVVRSEGATRAALTGLWFWGLDSEVLPRGAQFCQAGPPQRVGVRAPQGLAGASVVGMWGGAGAPRLGSHRGCGSGLT
AQTLHEVGSLDAAQGGQEGVQCGAVLGGPACKQGANGAGLMGKGVYVLGLVAQLARQVPPGVPRRAVEKLLHLLPLGWGQAAVEASVTLE
GLARGCLRVGLLVMQALAVHGDATVAVEFFSLWWGRLVHWPAVGSLLVLLAAVPPLEGYVGHKAHNHSSQDGAIDRDEVVGGASGHHGLG
AAHHCGHHTCHRAGYEVLFWRCLRLLGAGGCAVRALWGCGPCNPTARDLLALGVGPACALAELALGVLAHGAGQARVHVVGLVGIRAVGA
LLAHGVLLVLAGEHEARARLAHAARLAAPSRLILVVAVGAAAHGVVGLHARRRHALEPHALGARLARLGRAHHVGERHAVQAGLTHGLVG

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