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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>85967_85967_1_SPOP-UXT_SPOP_chr17_47699308_ENST00000347630_UXT_chrX_47516689_ENST00000333119_length(amino acids)=143AA_BP=69
MAMSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKCPDTSRIYVALGYGFFLELTLA

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>85967_85967_2_SPOP-UXT_SPOP_chr17_47699308_ENST00000393331_UXT_chrX_47516689_ENST00000333119_length(amino acids)=143AA_BP=69
MAMSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKCPDTSRIYVALGYGFFLELTLA

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>85967_85967_3_SPOP-UXT_SPOP_chr17_47699308_ENST00000504102_UXT_chrX_47516689_ENST00000333119_length(amino acids)=143AA_BP=69
MAMSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKCPDTSRIYVALGYGFFLELTLA

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