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 Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones. |
| >FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP >86201_86201_1_SQSTM1-CDKN1C_SQSTM1_chr5_179251323_ENST00000360718_CDKN1C_chr11_2905364_ENST00000313407_length(amino acids)=245AA_BP=202 MPSVAQVGVFVYSPVSVPFILASAHSSSLCPAENPWVLTCCLLNNLDEDGDLVAFSSDEELTMAMSYVKDDIFRIYIKEKKECRRDHRPP CAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSPFGHLSEGFSHSRWLRKVKHGHFGWPGWEMGP -------------------------------------------------------------- >86201_86201_2_SQSTM1-CDKN1C_SQSTM1_chr5_179251323_ENST00000360718_CDKN1C_chr11_2905364_ENST00000414822_length(amino acids)=245AA_BP=202 MPSVAQVGVFVYSPVSVPFILASAHSSSLCPAENPWVLTCCLLNNLDEDGDLVAFSSDEELTMAMSYVKDDIFRIYIKEKKECRRDHRPP CAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSPFGHLSEGFSHSRWLRKVKHGHFGWPGWEMGP -------------------------------------------------------------- >86201_86201_3_SQSTM1-CDKN1C_SQSTM1_chr5_179251323_ENST00000360718_CDKN1C_chr11_2905364_ENST00000430149_length(amino acids)=245AA_BP=202 MPSVAQVGVFVYSPVSVPFILASAHSSSLCPAENPWVLTCCLLNNLDEDGDLVAFSSDEELTMAMSYVKDDIFRIYIKEKKECRRDHRPP CAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSPFGHLSEGFSHSRWLRKVKHGHFGWPGWEMGP -------------------------------------------------------------- >86201_86201_4_SQSTM1-CDKN1C_SQSTM1_chr5_179251323_ENST00000360718_CDKN1C_chr11_2905364_ENST00000440480_length(amino acids)=245AA_BP=202 MPSVAQVGVFVYSPVSVPFILASAHSSSLCPAENPWVLTCCLLNNLDEDGDLVAFSSDEELTMAMSYVKDDIFRIYIKEKKECRRDHRPP CAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSPFGHLSEGFSHSRWLRKVKHGHFGWPGWEMGP -------------------------------------------------------------- >86201_86201_5_SQSTM1-CDKN1C_SQSTM1_chr5_179251323_ENST00000376929_CDKN1C_chr11_2905364_ENST00000313407_length(amino acids)=202AA_BP=159 MRKDEDGDLVAFSSDEELTMAMSYVKDDIFRIYIKEKKECRRDHRPPCAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCE GKGLHRGHTKLAFPSPFGHLSEGFSHSRWLRKVKHGHFGWPGWEMGPPGNWSPRPPRAGEARPGPTAESDFFAKRKRSAPEKSSGDVPAP -------------------------------------------------------------- >86201_86201_6_SQSTM1-CDKN1C_SQSTM1_chr5_179251323_ENST00000376929_CDKN1C_chr11_2905364_ENST00000414822_length(amino acids)=209AA_BP=1 MLCGSRRRLLLHERSQPRPSALPTSAAPAGSLGALWALNWLTAASCAGSAPPSPRQGRRLERDTARGHRPTTSQALISCAWRRNLILPWG QGGPPLHEEDVGSSFLVDPFPILATRSVRVSPSGASGCARSPQTGARRGWGMRAWCAPGASPFPRRRYTSRSLGRRCTCSGFLPQAHCSH -------------------------------------------------------------- >86201_86201_7_SQSTM1-CDKN1C_SQSTM1_chr5_179251323_ENST00000376929_CDKN1C_chr11_2905364_ENST00000430149_length(amino acids)=202AA_BP=159 MRKDEDGDLVAFSSDEELTMAMSYVKDDIFRIYIKEKKECRRDHRPPCAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCE GKGLHRGHTKLAFPSPFGHLSEGFSHSRWLRKVKHGHFGWPGWEMGPPGNWSPRPPRAGEARPGPTAESDFFAKRKRSAPEKSSGDVPAP -------------------------------------------------------------- >86201_86201_8_SQSTM1-CDKN1C_SQSTM1_chr5_179251323_ENST00000376929_CDKN1C_chr11_2905364_ENST00000440480_length(amino acids)=209AA_BP=1 MLCGSRRRLLLHERSQPRPSALPTSAAPAGSLGALWALNWLTAASCAGSAPPSPRQGRRLERDTARGHRPTTSQALISCAWRRNLILPWG QGGPPLHEEDVGSSFLVDPFPILATRSVRVSPSGASGCARSPQTGARRGWGMRAWCAPGASPFPRRRYTSRSLGRRCTCSGFLPQAHCSH -------------------------------------------------------------- >86201_86201_9_SQSTM1-CDKN1C_SQSTM1_chr5_179251323_ENST00000389805_CDKN1C_chr11_2905364_ENST00000313407_length(amino acids)=267AA_BP=224 MASLTVKAYLLGKEDAAREIRRFSFCCSPEPEAEAEAAAGPGPCERLLSRVAALFPALRPGGFQAHYRDEDGDLVAFSSDEELTMAMSYV KDDIFRIYIKEKKECRRDHRPPCAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSPFGHLSEGFS -------------------------------------------------------------- >86201_86201_10_SQSTM1-CDKN1C_SQSTM1_chr5_179251323_ENST00000389805_CDKN1C_chr11_2905364_ENST00000414822_length(amino acids)=267AA_BP=224 MASLTVKAYLLGKEDAAREIRRFSFCCSPEPEAEAEAAAGPGPCERLLSRVAALFPALRPGGFQAHYRDEDGDLVAFSSDEELTMAMSYV KDDIFRIYIKEKKECRRDHRPPCAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSPFGHLSEGFS -------------------------------------------------------------- >86201_86201_11_SQSTM1-CDKN1C_SQSTM1_chr5_179251323_ENST00000389805_CDKN1C_chr11_2905364_ENST00000430149_length(amino acids)=267AA_BP=224 MASLTVKAYLLGKEDAAREIRRFSFCCSPEPEAEAEAAAGPGPCERLLSRVAALFPALRPGGFQAHYRDEDGDLVAFSSDEELTMAMSYV KDDIFRIYIKEKKECRRDHRPPCAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSPFGHLSEGFS -------------------------------------------------------------- >86201_86201_12_SQSTM1-CDKN1C_SQSTM1_chr5_179251323_ENST00000389805_CDKN1C_chr11_2905364_ENST00000440480_length(amino acids)=267AA_BP=224 MASLTVKAYLLGKEDAAREIRRFSFCCSPEPEAEAEAAAGPGPCERLLSRVAALFPALRPGGFQAHYRDEDGDLVAFSSDEELTMAMSYV KDDIFRIYIKEKKECRRDHRPPCAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSPFGHLSEGFS -------------------------------------------------------------- >86201_86201_13_SQSTM1-CDKN1C_SQSTM1_chr5_179251323_ENST00000402874_CDKN1C_chr11_2905364_ENST00000313407_length(amino acids)=267AA_BP=224 MASLTVKAYLLGKEDAAREIRRFSFCCSPEPEAEAEAAAGPGPCERLLSRVAALFPALRPGGFQAHYRDEDGDLVAFSSDEELTMAMSYV KDDIFRIYIKEKKECRRDHRPPCAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSPFGHLSEGFS -------------------------------------------------------------- >86201_86201_14_SQSTM1-CDKN1C_SQSTM1_chr5_179251323_ENST00000402874_CDKN1C_chr11_2905364_ENST00000414822_length(amino acids)=267AA_BP=224 MASLTVKAYLLGKEDAAREIRRFSFCCSPEPEAEAEAAAGPGPCERLLSRVAALFPALRPGGFQAHYRDEDGDLVAFSSDEELTMAMSYV KDDIFRIYIKEKKECRRDHRPPCAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSPFGHLSEGFS -------------------------------------------------------------- >86201_86201_15_SQSTM1-CDKN1C_SQSTM1_chr5_179251323_ENST00000402874_CDKN1C_chr11_2905364_ENST00000430149_length(amino acids)=267AA_BP=224 MASLTVKAYLLGKEDAAREIRRFSFCCSPEPEAEAEAAAGPGPCERLLSRVAALFPALRPGGFQAHYRDEDGDLVAFSSDEELTMAMSYV KDDIFRIYIKEKKECRRDHRPPCAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSPFGHLSEGFS -------------------------------------------------------------- >86201_86201_16_SQSTM1-CDKN1C_SQSTM1_chr5_179251323_ENST00000402874_CDKN1C_chr11_2905364_ENST00000440480_length(amino acids)=267AA_BP=224 MASLTVKAYLLGKEDAAREIRRFSFCCSPEPEAEAEAAAGPGPCERLLSRVAALFPALRPGGFQAHYRDEDGDLVAFSSDEELTMAMSYV KDDIFRIYIKEKKECRRDHRPPCAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSPFGHLSEGFS -------------------------------------------------------------- >86201_86201_17_SQSTM1-CDKN1C_SQSTM1_chr5_179251323_ENST00000510187_CDKN1C_chr11_2905364_ENST00000313407_length(amino acids)=267AA_BP=224 MASLTVKAYLLGKEDAAREIRRFSFCCSPEPEAEAEAAAGPGPCERLLSRVAALFPALRPGGFQAHYRDEDGDLVAFSSDEELTMAMSYV KDDIFRIYIKEKKECRRDHRPPCAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSPFGHLSEGFS -------------------------------------------------------------- >86201_86201_18_SQSTM1-CDKN1C_SQSTM1_chr5_179251323_ENST00000510187_CDKN1C_chr11_2905364_ENST00000414822_length(amino acids)=267AA_BP=224 MASLTVKAYLLGKEDAAREIRRFSFCCSPEPEAEAEAAAGPGPCERLLSRVAALFPALRPGGFQAHYRDEDGDLVAFSSDEELTMAMSYV KDDIFRIYIKEKKECRRDHRPPCAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSPFGHLSEGFS -------------------------------------------------------------- >86201_86201_19_SQSTM1-CDKN1C_SQSTM1_chr5_179251323_ENST00000510187_CDKN1C_chr11_2905364_ENST00000430149_length(amino acids)=267AA_BP=224 MASLTVKAYLLGKEDAAREIRRFSFCCSPEPEAEAEAAAGPGPCERLLSRVAALFPALRPGGFQAHYRDEDGDLVAFSSDEELTMAMSYV KDDIFRIYIKEKKECRRDHRPPCAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSPFGHLSEGFS -------------------------------------------------------------- >86201_86201_20_SQSTM1-CDKN1C_SQSTM1_chr5_179251323_ENST00000510187_CDKN1C_chr11_2905364_ENST00000440480_length(amino acids)=267AA_BP=224 MASLTVKAYLLGKEDAAREIRRFSFCCSPEPEAEAEAAAGPGPCERLLSRVAALFPALRPGGFQAHYRDEDGDLVAFSSDEELTMAMSYV KDDIFRIYIKEKKECRRDHRPPCAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSPFGHLSEGFS -------------------------------------------------------------- |
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