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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>87239_87239_1_STAT3-C1orf43_STAT3_chr17_40497577_ENST00000389272_C1orf43_chr1_154180124_ENST00000350592_length(amino acids)=144AA_BP=79
MRPAKNHMPLWCFIISWERLTSSIAASCKSRMFSISTIYEESSSFFRAGILRSQWRLPGLWPGACGKNHAFYRLQPLRPRVKARIGSSQR

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>87239_87239_2_STAT3-C1orf43_STAT3_chr17_40497577_ENST00000389272_C1orf43_chr1_154180124_ENST00000368519_length(amino acids)=144AA_BP=79
MRPAKNHMPLWCFIISWERLTSSIAASCKSRMFSISTIYEESSSFFRAGILRSQWRLPGLWPGACGKNHAFYRLQPLRPRVKARIGSSQR

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>87239_87239_3_STAT3-C1orf43_STAT3_chr17_40497577_ENST00000389272_C1orf43_chr1_154180124_ENST00000368521_length(amino acids)=144AA_BP=79
MRPAKNHMPLWCFIISWERLTSSIAASCKSRMFSISTIYEESSSFFRAGILRSQWRLPGLWPGACGKNHAFYRLQPLRPRVKARIGSSQR

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>87239_87239_4_STAT3-C1orf43_STAT3_chr17_40497577_ENST00000404395_C1orf43_chr1_154180124_ENST00000350592_length(amino acids)=179AA_BP=114
MTHGTWSSSISSTVTASQWSCGSFWPLGLRVKIGHMRPAKNHMPLWCFIISWERLTSSIAASCKSRMFSISTIYEESSSFFRAGILRSQW

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>87239_87239_5_STAT3-C1orf43_STAT3_chr17_40497577_ENST00000404395_C1orf43_chr1_154180124_ENST00000368519_length(amino acids)=179AA_BP=114
MTHGTWSSSISSTVTASQWSCGSFWPLGLRVKIGHMRPAKNHMPLWCFIISWERLTSSIAASCKSRMFSISTIYEESSSFFRAGILRSQW

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>87239_87239_6_STAT3-C1orf43_STAT3_chr17_40497577_ENST00000404395_C1orf43_chr1_154180124_ENST00000368521_length(amino acids)=179AA_BP=114
MTHGTWSSSISSTVTASQWSCGSFWPLGLRVKIGHMRPAKNHMPLWCFIISWERLTSSIAASCKSRMFSISTIYEESSSFFRAGILRSQW

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>87239_87239_7_STAT3-C1orf43_STAT3_chr17_40497577_ENST00000585517_C1orf43_chr1_154180124_ENST00000350592_length(amino acids)=179AA_BP=114
MTHGTWSSSISSTVTASQWSCGSFWPLGLRVKIGHMRPAKNHMPLWCFIISWERLTSSIAASCKSRMFSISTIYEESSSFFRAGILRSQW

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>87239_87239_8_STAT3-C1orf43_STAT3_chr17_40497577_ENST00000585517_C1orf43_chr1_154180124_ENST00000368519_length(amino acids)=179AA_BP=114
MTHGTWSSSISSTVTASQWSCGSFWPLGLRVKIGHMRPAKNHMPLWCFIISWERLTSSIAASCKSRMFSISTIYEESSSFFRAGILRSQW

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>87239_87239_9_STAT3-C1orf43_STAT3_chr17_40497577_ENST00000585517_C1orf43_chr1_154180124_ENST00000368521_length(amino acids)=179AA_BP=114
MTHGTWSSSISSTVTASQWSCGSFWPLGLRVKIGHMRPAKNHMPLWCFIISWERLTSSIAASCKSRMFSISTIYEESSSFFRAGILRSQW

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>87239_87239_10_STAT3-C1orf43_STAT3_chr17_40497577_ENST00000588969_C1orf43_chr1_154180124_ENST00000350592_length(amino acids)=189AA_BP=
MGGGAGGSDVAAEGTSPNRILDRHPGLALSLPLGSERPFGLREPRRPSPAHAQPRPLGLCRRNRMAQWNQLQQLDTRYLEQLHQLYSDSF
PMELRQFLAPWIESQDWAYAASKESHATLVFHNLLGEIDQQYSRFLQESNVLYQHNLRRIKQFLQSRYLEKPMEIARIVARCLWEESRLL

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>87239_87239_11_STAT3-C1orf43_STAT3_chr17_40497577_ENST00000588969_C1orf43_chr1_154180124_ENST00000368519_length(amino acids)=189AA_BP=
MGGGAGGSDVAAEGTSPNRILDRHPGLALSLPLGSERPFGLREPRRPSPAHAQPRPLGLCRRNRMAQWNQLQQLDTRYLEQLHQLYSDSF
PMELRQFLAPWIESQDWAYAASKESHATLVFHNLLGEIDQQYSRFLQESNVLYQHNLRRIKQFLQSRYLEKPMEIARIVARCLWEESRLL

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>87239_87239_12_STAT3-C1orf43_STAT3_chr17_40497577_ENST00000588969_C1orf43_chr1_154180124_ENST00000368521_length(amino acids)=189AA_BP=
MGGGAGGSDVAAEGTSPNRILDRHPGLALSLPLGSERPFGLREPRRPSPAHAQPRPLGLCRRNRMAQWNQLQQLDTRYLEQLHQLYSDSF
PMELRQFLAPWIESQDWAYAASKESHATLVFHNLLGEIDQQYSRFLQESNVLYQHNLRRIKQFLQSRYLEKPMEIARIVARCLWEESRLL

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