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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>87340_87340_1_STAU2-PAWR_STAU2_chr8_74621267_ENST00000519961_PAWR_chr12_80014987_ENST00000328827_length(amino acids)=206AA_BP=38
MANPKEKTAMCLVNELARFNRVQPQYKLLNERGPAHSKCLDEYEDDEAGQKERKREDAITQQNTIQNEAVNLLDPGSSYLLQEPPRTVSG
RYKSTTSVSEEDVSSRYSRTDRSGFPRYNRDANVSGTLVSSSTLEKKIEDLEKEVVRERQENLRLVRLMQDKEEMIGKLKEEIDLLNRDL

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>87340_87340_2_STAU2-PAWR_STAU2_chr8_74650518_ENST00000522695_PAWR_chr12_80014987_ENST00000328827_length(amino acids)=174AA_BP=5
MLQINQCLDEYEDDEAGQKERKREDAITQQNTIQNEAVNLLDPGSSYLLQEPPRTVSGRYKSTTSVSEEDVSSRYSRTDRSGFPRYNRDA

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>87340_87340_3_STAU2-PAWR_STAU2_chr8_74650519_ENST00000522695_PAWR_chr12_80014987_ENST00000328827_length(amino acids)=174AA_BP=5
MLQINQCLDEYEDDEAGQKERKREDAITQQNTIQNEAVNLLDPGSSYLLQEPPRTVSGRYKSTTSVSEEDVSSRYSRTDRSGFPRYNRDA

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