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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>87546_87546_1_STK38-PXT1_STK38_chr6_36507848_ENST00000229812_PXT1_chr6_36368361_ENST00000454782_length(amino acids)=120AA_BP=
MKENLVLKLKATEMGTTSWPTPWAPCPLVTCWLHSCHSCPDLQCQLLLLGDMSPPCPNPGSNPLWKIEVKHLSLILKFNIWLISSTFPFP

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>87546_87546_2_STK38-PXT1_STK38_chr6_36507849_ENST00000229812_PXT1_chr6_36368361_ENST00000454782_length(amino acids)=120AA_BP=
MKENLVLKLKATEMGTTSWPTPWAPCPLVTCWLHSCHSCPDLQCQLLLLGDMSPPCPNPGSNPLWKIEVKHLSLILKFNIWLISSTFPFP

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