FusionNeoAntigen Logo

Home

Download

Statistics

Examples

Help

Contact

Terms of Use

Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>89790_89790_1_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000398339_PMAIP1_chr18_57569878_ENST00000269518_length(amino acids)=448AA_BP=80
MFSKRLEKIAQVPLLFPFIFIILTNYSKMEGAVESQPSFFKTSQDIVTCTWVENCYSSFSRRPLEQMFCKHQSKNIISWTGMVAHTCNPS
TLGGQGLCDFAKMHHQQRMAALGTDKELSDLLDFSAMFSPPVSSGKNGPTSLASGHFTGSNVEDRSSSGSWGNGGHPSPSRNYGDGTPYD
HMTSRDLGSHDNLSPPFVNSRIQSKTERGSYSSYGRESNLQGCHQQSLLGGDMDMGNPGTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEV
QTKKVRKVPPGLPSSVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLH

--------------------------------------------------------------

>89790_89790_2_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000398339_PMAIP1_chr18_57569878_ENST00000316660_length(amino acids)=448AA_BP=80
MFSKRLEKIAQVPLLFPFIFIILTNYSKMEGAVESQPSFFKTSQDIVTCTWVENCYSSFSRRPLEQMFCKHQSKNIISWTGMVAHTCNPS
TLGGQGLCDFAKMHHQQRMAALGTDKELSDLLDFSAMFSPPVSSGKNGPTSLASGHFTGSNVEDRSSSGSWGNGGHPSPSRNYGDGTPYD
HMTSRDLGSHDNLSPPFVNSRIQSKTERGSYSSYGRESNLQGCHQQSLLGGDMDMGNPGTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEV
QTKKVRKVPPGLPSSVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLH

--------------------------------------------------------------

>89790_89790_3_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000457482_PMAIP1_chr18_57569878_ENST00000269518_length(amino acids)=186AA_BP=170
MYCAYTIPGMGGNSLMYYYNGKAVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQ
SSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGKALASSWKSSVLLNS

--------------------------------------------------------------

>89790_89790_4_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000457482_PMAIP1_chr18_57569878_ENST00000316660_length(amino acids)=186AA_BP=170
MYCAYTIPGMGGNSLMYYYNGKAVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQ
SSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGKALASSWKSSVLLNS

--------------------------------------------------------------

>89790_89790_5_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000543082_PMAIP1_chr18_57569878_ENST00000269518_length(amino acids)=304AA_BP=288
MEEDSRDVEDRSSSGSWGNGGHPSPSRNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQSKTERGSYSSYGRESNLQGCHQQSLLGGDMD
MGNPGTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEVQTKKVRKVPPGLPSSVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHH
SSDPWSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGS

--------------------------------------------------------------

>89790_89790_6_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000543082_PMAIP1_chr18_57569878_ENST00000316660_length(amino acids)=304AA_BP=288
MEEDSRDVEDRSSSGSWGNGGHPSPSRNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQSKTERGSYSSYGRESNLQGCHQQSLLGGDMD
MGNPGTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEVQTKKVRKVPPGLPSSVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHH
SSDPWSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGS

--------------------------------------------------------------

>89790_89790_7_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000544241_PMAIP1_chr18_57569878_ENST00000269518_length(amino acids)=300AA_BP=284
MFVRESGGHWNDSFWKCGAVWLRIGMKDIFFQFIIARVRKCYSLSCLHTLPVVPTLRKTERGSYSSYGRESNLQGCHQSLLGGDMDMGNP
GTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEVQTKKVRKVPPGLPSSVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDP
WSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGSGAAG

--------------------------------------------------------------

>89790_89790_8_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000544241_PMAIP1_chr18_57569878_ENST00000316660_length(amino acids)=300AA_BP=284
MFVRESGGHWNDSFWKCGAVWLRIGMKDIFFQFIIARVRKCYSLSCLHTLPVVPTLRKTERGSYSSYGRESNLQGCHQSLLGGDMDMGNP
GTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEVQTKKVRKVPPGLPSSVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDP
WSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGSGAAG

--------------------------------------------------------------

>89790_89790_9_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000561831_PMAIP1_chr18_57569878_ENST00000269518_length(amino acids)=186AA_BP=170
MKFKQCRCSDTGLCCLDHEGKAEVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQ
SSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGKALASSWKSSVLLNS

--------------------------------------------------------------

>89790_89790_10_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000561831_PMAIP1_chr18_57569878_ENST00000316660_length(amino acids)=186AA_BP=170
MKFKQCRCSDTGLCCLDHEGKAEVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQ
SSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGKALASSWKSSVLLNS

--------------------------------------------------------------

>89790_89790_11_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000564228_PMAIP1_chr18_57569878_ENST00000269518_length(amino acids)=275AA_BP=259
MKDIFFQFIIARVRKCYSLSCLHTLPVVPTLRKTERGSYSSYGRESNLQGCHQSLLGGDMDMGNPGTLSPTKPGSQYYQYSSNNPRRRPL
HSSAMEVQTKKVRKVPPGLPSSVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQS
SSYCSLHPHERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGKALASSWKSSVLLNSG

--------------------------------------------------------------

>89790_89790_12_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000564228_PMAIP1_chr18_57569878_ENST00000316660_length(amino acids)=275AA_BP=259
MKDIFFQFIIARVRKCYSLSCLHTLPVVPTLRKTERGSYSSYGRESNLQGCHQSLLGGDMDMGNPGTLSPTKPGSQYYQYSSNNPRRRPL
HSSAMEVQTKKVRKVPPGLPSSVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQS
SSYCSLHPHERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGKALASSWKSSVLLNSG

--------------------------------------------------------------

>89790_89790_13_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000564403_PMAIP1_chr18_57569878_ENST00000269518_length(amino acids)=358AA_BP=342
MCDFAKMHHQQRMAALGTDKELSDLLDFSAMFSPPVSSGKNGPTSLASGHFTGSNVEDRSSSGSWGNGGHPSPSRNYGDGTPYDHMTSRD
LGSHDNLSPPFVNSRIQSKTERGSYSSYGRESNLQGCHQQSLLGGDMDMGNPGTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEVQTKKVR
KVPPGLPSSLVLSPQVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLH

--------------------------------------------------------------

>89790_89790_14_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000564403_PMAIP1_chr18_57569878_ENST00000316660_length(amino acids)=358AA_BP=342
MCDFAKMHHQQRMAALGTDKELSDLLDFSAMFSPPVSSGKNGPTSLASGHFTGSNVEDRSSSGSWGNGGHPSPSRNYGDGTPYDHMTSRD
LGSHDNLSPPFVNSRIQSKTERGSYSSYGRESNLQGCHQQSLLGGDMDMGNPGTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEVQTKKVR
KVPPGLPSSLVLSPQVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLH

--------------------------------------------------------------

>89790_89790_15_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000565018_PMAIP1_chr18_57569878_ENST00000269518_length(amino acids)=352AA_BP=336
MCDFAKMHHQQRMAALGTDKELSDLLDFSAMFSPPVSSGKNGPTSLASGHFTGSNVEDRSSSGSWGNGGHPSPSRNYGDGTPYDHMTSRD
LGSHDNLSPPFVNSRIQSKTERGSYSSYGRESNLQGCHQQSLLGGDMDMGNPGTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEVQTKKVR
KVPPGLPSSVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLHPHERLS

--------------------------------------------------------------

>89790_89790_16_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000565018_PMAIP1_chr18_57569878_ENST00000316660_length(amino acids)=352AA_BP=336
MCDFAKMHHQQRMAALGTDKELSDLLDFSAMFSPPVSSGKNGPTSLASGHFTGSNVEDRSSSGSWGNGGHPSPSRNYGDGTPYDHMTSRD
LGSHDNLSPPFVNSRIQSKTERGSYSSYGRESNLQGCHQQSLLGGDMDMGNPGTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEVQTKKVR
KVPPGLPSSVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLHPHERLS

--------------------------------------------------------------

>89790_89790_17_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000566286_PMAIP1_chr18_57569878_ENST00000269518_length(amino acids)=344AA_BP=328
MQRAKTELFRLQIVTDDLRKNEMFSPPVSSGKNGPTSLASGHFTGSNVEDRSSSGSWGNGGHPSPSRNYGDGTPYDHMTSRDLGSHDNLS
PPFVNSRIQSKTERGSYSSYGRESNLQGCHQQSLLGGDMDMGNPGTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEVQTKKVRKVPPGLPS
SVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLHPHERLSYPSHSSAD

--------------------------------------------------------------

>89790_89790_18_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000566286_PMAIP1_chr18_57569878_ENST00000316660_length(amino acids)=344AA_BP=328
MQRAKTELFRLQIVTDDLRKNEMFSPPVSSGKNGPTSLASGHFTGSNVEDRSSSGSWGNGGHPSPSRNYGDGTPYDHMTSRDLGSHDNLS
PPFVNSRIQSKTERGSYSSYGRESNLQGCHQQSLLGGDMDMGNPGTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEVQTKKVRKVPPGLPS
SVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLHPHERLSYPSHSSAD

--------------------------------------------------------------

>89790_89790_19_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000567880_PMAIP1_chr18_57569878_ENST00000269518_length(amino acids)=286AA_BP=270
MHHQQRMAALGTDKELSDLLDFSAMFSPPVSSGKNGPTSLASGHFTGSNVEDRSSSGSWGNGGHPSPSRNYGDGTPYDHMTSRDLGSHDN
LSPPFVNSRIQSKTERGSYSSYGRESNLQGCHQVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAG
MLGNSSHIPQSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGKALAS

--------------------------------------------------------------

>89790_89790_20_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000567880_PMAIP1_chr18_57569878_ENST00000316660_length(amino acids)=286AA_BP=270
MHHQQRMAALGTDKELSDLLDFSAMFSPPVSSGKNGPTSLASGHFTGSNVEDRSSSGSWGNGGHPSPSRNYGDGTPYDHMTSRDLGSHDN
LSPPFVNSRIQSKTERGSYSSYGRESNLQGCHQVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAG
MLGNSSHIPQSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGKALAS

--------------------------------------------------------------

>89790_89790_21_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000570177_PMAIP1_chr18_57569878_ENST00000269518_length(amino acids)=259AA_BP=243
MVKSSCRSAVHGSLFGKNSAGKKFTAIPAQRKHLWNQSLLGGDMDMGNPGTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEVQTKKVRKVP
PGLPSSVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLHPHERLSYPS

--------------------------------------------------------------

>89790_89790_22_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000570177_PMAIP1_chr18_57569878_ENST00000316660_length(amino acids)=259AA_BP=243
MVKSSCRSAVHGSLFGKNSAGKKFTAIPAQRKHLWNQSLLGGDMDMGNPGTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEVQTKKVRKVP
PGLPSSVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLHPHERLSYPS

--------------------------------------------------------------

>89790_89790_23_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000570287_PMAIP1_chr18_57569878_ENST00000269518_length(amino acids)=186AA_BP=170
MYCAYTIPGMGGNSLMYYYNGKAVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQ
SSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGKALASSWKSSVLLNS

--------------------------------------------------------------

>89790_89790_24_TCF4-PMAIP1_TCF4_chr18_52928696_ENST00000570287_PMAIP1_chr18_57569878_ENST00000316660_length(amino acids)=186AA_BP=170
MYCAYTIPGMGGNSLMYYYNGKAVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQ
SSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGKALASSWKSSVLLNS

--------------------------------------------------------------