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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>89837_89837_1_TCHP-PPTC7_TCHP_chr12_110342598_ENST00000312777_PPTC7_chr12_110976078_ENST00000354300_length(amino acids)=230AA_BP=168
MVQRLIHWRLYGSGKKMALPTLPSYWCSQQRLNQQLARQREQEARLRQQWEQNSRYFRMSDICSSKQAEWSSKTSYQRSMHAYQREKMKE
EKRRSLEARREKLRQLMQEEQDLLARELEELRLSMNLQERRIREQHGKLKSAKEEQRKLIAEQLLYEHWKKNNPKLRENSNYESIQQTAR

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>89837_89837_2_TCHP-PPTC7_TCHP_chr12_110342598_ENST00000405876_PPTC7_chr12_110976078_ENST00000354300_length(amino acids)=245AA_BP=183
MGITPGDWPARFVPAGSRAGGLFGNSEPQRNMALPTLPSYWCSQQRLNQQLARQREQEARLRQQWEQNSRYFRMSDICSSKQAEWSSKTS
YQRSMHAYQREKMKEEKRRSLEARREKLRQLMQEEQDLLARELEELRLSMNLQERRIREQHGKLKSAKEEQRKLIAEQLLYEHWKKNNPK

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