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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>89968_89968_1_TEAD2-NOSIP_TEAD2_chr19_49858405_ENST00000311227_NOSIP_chr19_50060506_ENST00000339093_length(amino acids)=231AA_BP=13
MVWRIWAPLECSRAYEKQRGTRREEQKELQRAASQDHVRGFLEKESAIVSRPLNPFTAKALSGTSPGDSDDVQPGPSVGPPSKDKDKVLP
SFWIPSLTPEAKATKLEKPSRTVTCPMSGKPLRMSDLTPVHFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPCAVLRPSGAVVTLEC

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>89968_89968_2_TEAD2-NOSIP_TEAD2_chr19_49858405_ENST00000311227_NOSIP_chr19_50060506_ENST00000391853_length(amino acids)=228AA_BP=13
MVWRIWAPLECSRAYEKQRGTRREEQKELQRAASQDHVRGFLEKESAIVSRPLNPFTAKALSGTSPDDVQPGPSVGPPSKDKDKVLPSFW
IPSLTPEAKATKLEKPSRTVTCPMSGKPLRMSDLTPVHFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPCAVLRPSGAVVTLECVEK

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>89968_89968_3_TEAD2-NOSIP_TEAD2_chr19_49858405_ENST00000311227_NOSIP_chr19_50060506_ENST00000596358_length(amino acids)=228AA_BP=13
MVWRIWAPLECSRAYEKQRGTRREEQKELQRAASQDHVRGFLEKESAIVSRPLNPFTAKALSGTSPDDVQPGPSVGPPSKDKDKVLPSFW
IPSLTPEAKATKLEKPSRTVTCPMSGKPLRMSDLTPVHFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPCAVLRPSGAVVTLECVEK

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