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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>91155_91155_1_TLK2-FN3KRP_TLK2_chr17_60558567_ENST00000326270_FN3KRP_chr17_80676782_ENST00000269373_length(amino acids)=338AA_BP=76
MPGRGVAALRRGPGSAPGLPRGRAERSAAGSGRGPSREERGAAAAAAAEMMEELHSLDPRRQELLEARFTGVGVSKARRMFEGEMASLTA
ILKTNTVKVPKPIKVLDAPGGGSVLVMEHMDMRHLSSHAAKLGAQLADLHLDNKKLGEMRLKEAGTVGRGGGQEERPFVARFGFDVVTCC
GYLPQVNDWQEDWVVFYARQRIQPQMDMVEKESGDREALQLWSALQLKIPDLFRDLEIIPALLHGDLWGGNVAEDSSGPVIFDPASFYGH

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>91155_91155_2_TLK2-FN3KRP_TLK2_chr17_60558567_ENST00000343388_FN3KRP_chr17_80676782_ENST00000269373_length(amino acids)=321AA_BP=59
MPRGRAERSAAGSGRGPSREERGAAAAAAAAEMMEELHSLDPRRQELLEARFTGVGVSKARRMFEGEMASLTAILKTNTVKVPKPIKVLD
APGGGSVLVMEHMDMRHLSSHAAKLGAQLADLHLDNKKLGEMRLKEAGTVGRGGGQEERPFVARFGFDVVTCCGYLPQVNDWQEDWVVFY
ARQRIQPQMDMVEKESGDREALQLWSALQLKIPDLFRDLEIIPALLHGDLWGGNVAEDSSGPVIFDPASFYGHSEYELAIAGMFGGFSSS

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>91155_91155_3_TLK2-FN3KRP_TLK2_chr17_60558567_ENST00000346027_FN3KRP_chr17_80676782_ENST00000269373_length(amino acids)=339AA_BP=77
MPGRGVAALRRGPGSAPGLPRGRAERSAAGSGRGPSREERGAAAAAAAAEMMEELHSLDPRRQELLEARFTGVGVSKARRMFEGEMASLT
AILKTNTVKVPKPIKVLDAPGGGSVLVMEHMDMRHLSSHAAKLGAQLADLHLDNKKLGEMRLKEAGTVGRGGGQEERPFVARFGFDVVTC
CGYLPQVNDWQEDWVVFYARQRIQPQMDMVEKESGDREALQLWSALQLKIPDLFRDLEIIPALLHGDLWGGNVAEDSSGPVIFDPASFYG

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>91155_91155_4_TLK2-FN3KRP_TLK2_chr17_60558567_ENST00000542523_FN3KRP_chr17_80676782_ENST00000269373_length(amino acids)=289AA_BP=27
MMEELHSLDPRRQELLEARFTGVGVSKARRMFEGEMASLTAILKTNTVKVPKPIKVLDAPGGGSVLVMEHMDMRHLSSHAAKLGAQLADL
HLDNKKLGEMRLKEAGTVGRGGGQEERPFVARFGFDVVTCCGYLPQVNDWQEDWVVFYARQRIQPQMDMVEKESGDREALQLWSALQLKI
PDLFRDLEIIPALLHGDLWGGNVAEDSSGPVIFDPASFYGHSEYELAIAGMFGGFSSSFYSAYHGKIPKAPGFEKRLQLYQLFHYLNHWN

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