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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>9282_9282_1_BCAT2-AK1_BCAT2_chr19_49314240_ENST00000316273_AK1_chr9_130630791_ENST00000223836_length(amino acids)=94AA_BP=7
MAAAALGQIGQPTLLLYVDAGPETMTQRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYEKRGIVRKVNAEGSVDSVFSQVCTHL

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>9282_9282_2_BCAT2-AK1_BCAT2_chr19_49314240_ENST00000316273_AK1_chr9_130630791_ENST00000373156_length(amino acids)=94AA_BP=7
MAAAALGQIGQPTLLLYVDAGPETMTQRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYEKRGIVRKVNAEGSVDSVFSQVCTHL

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>9282_9282_3_BCAT2-AK1_BCAT2_chr19_49314240_ENST00000316273_AK1_chr9_130630791_ENST00000373176_length(amino acids)=133AA_BP=
MTPHPPMPLRCPFQTLRASRVKEANSLPTGPAGVGRPNCPGSPTQTMTLLPVQSRPRQGPGMEHMLRAMGVRAKATEQDAEEPRLGPVLP

--------------------------------------------------------------

>9282_9282_4_BCAT2-AK1_BCAT2_chr19_49314240_ENST00000545387_AK1_chr9_130630791_ENST00000223836_length(amino acids)=94AA_BP=7
MAAAALGQIGQPTLLLYVDAGPETMTQRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYEKRGIVRKVNAEGSVDSVFSQVCTHL

--------------------------------------------------------------

>9282_9282_5_BCAT2-AK1_BCAT2_chr19_49314240_ENST00000545387_AK1_chr9_130630791_ENST00000373156_length(amino acids)=94AA_BP=7
MAAAALGQIGQPTLLLYVDAGPETMTQRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYEKRGIVRKVNAEGSVDSVFSQVCTHL

--------------------------------------------------------------

>9282_9282_6_BCAT2-AK1_BCAT2_chr19_49314240_ENST00000545387_AK1_chr9_130630791_ENST00000373176_length(amino acids)=133AA_BP=
MTPHPPMPLRCPFQTLRASRVKEANSLPTGPAGVGRPNCPGSPTQTMTLLPVQSRPRQGPGMEHMLRAMGVRAKATEQDAEEPRLGPVLP

--------------------------------------------------------------

>9282_9282_7_BCAT2-AK1_BCAT2_chr19_49314240_ENST00000598162_AK1_chr9_130630791_ENST00000223836_length(amino acids)=94AA_BP=7
MAAAALGQIGQPTLLLYVDAGPETMTQRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYEKRGIVRKVNAEGSVDSVFSQVCTHL

--------------------------------------------------------------

>9282_9282_8_BCAT2-AK1_BCAT2_chr19_49314240_ENST00000598162_AK1_chr9_130630791_ENST00000373156_length(amino acids)=94AA_BP=7
MAAAALGQIGQPTLLLYVDAGPETMTQRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYEKRGIVRKVNAEGSVDSVFSQVCTHL

--------------------------------------------------------------

>9282_9282_9_BCAT2-AK1_BCAT2_chr19_49314240_ENST00000598162_AK1_chr9_130630791_ENST00000373176_length(amino acids)=133AA_BP=
MTPHPPMPLRCPFQTLRASRVKEANSLPTGPAGVGRPNCPGSPTQTMTLLPVQSRPRQGPGMEHMLRAMGVRAKATEQDAEEPRLGPVLP

--------------------------------------------------------------

>9282_9282_10_BCAT2-AK1_BCAT2_chr19_49314240_ENST00000599246_AK1_chr9_130630791_ENST00000223836_length(amino acids)=94AA_BP=7
MAAAALGQIGQPTLLLYVDAGPETMTQRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYEKRGIVRKVNAEGSVDSVFSQVCTHL

--------------------------------------------------------------

>9282_9282_11_BCAT2-AK1_BCAT2_chr19_49314240_ENST00000599246_AK1_chr9_130630791_ENST00000373156_length(amino acids)=94AA_BP=7
MAAAALGQIGQPTLLLYVDAGPETMTQRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYEKRGIVRKVNAEGSVDSVFSQVCTHL

--------------------------------------------------------------

>9282_9282_12_BCAT2-AK1_BCAT2_chr19_49314240_ENST00000599246_AK1_chr9_130630791_ENST00000373176_length(amino acids)=133AA_BP=
MTPHPPMPLRCPFQTLRASRVKEANSLPTGPAGVGRPNCPGSPTQTMTLLPVQSRPRQGPGMEHMLRAMGVRAKATEQDAEEPRLGPVLP

--------------------------------------------------------------