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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>95596_95596_1_TXNL4B-RPL22_TXNL4B_chr16_72122885_ENST00000423037_RPL22_chr1_6257816_ENST00000234875_length(amino acids)=112AA_BP=1
MLLATTRNQSRRLFFFKYFLVRYFKYLLEKGTSDVTVILLLLLSMVTTPPPRFPAFPFTLILSCKNCSKLAASMIPSSTGWVQSRVNFRT

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>95596_95596_2_TXNL4B-RPL22_TXNL4B_chr16_72122885_ENST00000423037_RPL22_chr1_6257816_ENST00000484532_length(amino acids)=182AA_BP=100
MGYFKMSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFF
NGQHMKVDYGKKLVVKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRRPA

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>95596_95596_3_TXNL4B-RPL22_TXNL4B_chr16_72122885_ENST00000426362_RPL22_chr1_6257816_ENST00000234875_length(amino acids)=130AA_BP=
MTRARRKAKAARTDAASLRSDSEDSHLGYFKMSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIY

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>95596_95596_4_TXNL4B-RPL22_TXNL4B_chr16_72122885_ENST00000426362_RPL22_chr1_6257816_ENST00000484532_length(amino acids)=208AA_BP=126
MTRARRKAKAARTDAASLRSDSEDSHLGYFKMSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIY
LVDVDQTAVYTQYFDISYIPSTVFFFNGQHMKVDYGKKLVVKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGG

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