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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>96732_96732_1_UHRF2-LSM3_UHRF2_chr9_6421142_ENST00000276893_LSM3_chr3_14239535_ENST00000306024_length(amino acids)=190AA_BP=164
MPLRARAAGKAARAGRGAAPRAQGETKGTGSSLGAKMWIQVRTIDGSKTCTIEDVSRKATIEELRERVWALFDVRPECQRLFYRGKQLEN
GYTLFDYDVGLNDIIQLLVRPDPDHLPGTSTQIEAKPCSNSPPKVKKAPRVGPSNQPSTSARARLIDPGFGIYKSTKRNIPMLFVRGDGV

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>96732_96732_2_UHRF2-LSM3_UHRF2_chr9_6421142_ENST00000381373_LSM3_chr3_14239535_ENST00000306024_length(amino acids)=154AA_BP=128
MWIQVRTIDGSKTCTIEDVSRKATIEELRERVWALFDVRPECQRLFYRGKQLENGYTLFDYDVGLNDIIQLLVRPDPDHLPGTSTQIEAK

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