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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>96758_96758_1_ULK2-B9D1_ULK2_chr17_19768116_ENST00000361658_B9D1_chr17_19251193_ENST00000477478_length(amino acids)=251AA_BP=1
MIPAPHCAARPSAVCPGGAAMEVVGDFEYSKRDLVGHGAFAVVFRGRHRQKTDWEVAIKSINKKNLSKSQILLGKEIKILKELQHENIVA
LYDVQGHRSCSACMDQMCSGTMWFEAMGPCTCPSHLAGTKGPSPCLSQNLRLNCRSLQAGSWGGGPSTQTPRWWLRVKAGKVKLPPLSYP

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>96758_96758_2_ULK2-B9D1_ULK2_chr17_19768116_ENST00000361658_B9D1_chr17_19251193_ENST00000575403_length(amino acids)=185AA_BP=1
MIPAPHCAARPSAVCPGGAAMEVVGDFEYSKRDLVGHGAFAVVFRGRHRQKTDWEVAIKSINKKNLSKSQILLGKEIKILKELQHENIVA
LYDVQGHRSCSACMDQMCSGTMWFEAMGPCTCPSHLAGTKGPSPCLSQNLRLNCRSLQAGSWGGGPSTQTPRWWLRVKAGKPPSGLSVKD

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>96758_96758_3_ULK2-B9D1_ULK2_chr17_19768116_ENST00000395544_B9D1_chr17_19251193_ENST00000477478_length(amino acids)=251AA_BP=1
MIPAPHCAARPSAVCPGGAAMEVVGDFEYSKRDLVGHGAFAVVFRGRHRQKTDWEVAIKSINKKNLSKSQILLGKEIKILKELQHENIVA
LYDVQGHRSCSACMDQMCSGTMWFEAMGPCTCPSHLAGTKGPSPCLSQNLRLNCRSLQAGSWGGGPSTQTPRWWLRVKAGKVKLPPLSYP

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>96758_96758_4_ULK2-B9D1_ULK2_chr17_19768116_ENST00000395544_B9D1_chr17_19251193_ENST00000575403_length(amino acids)=185AA_BP=1
MIPAPHCAARPSAVCPGGAAMEVVGDFEYSKRDLVGHGAFAVVFRGRHRQKTDWEVAIKSINKKNLSKSQILLGKEIKILKELQHENIVA
LYDVQGHRSCSACMDQMCSGTMWFEAMGPCTCPSHLAGTKGPSPCLSQNLRLNCRSLQAGSWGGGPSTQTPRWWLRVKAGKPPSGLSVKD

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