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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>98589_98589_1_VTI1A-GTF2H5_VTI1A_chr10_114298089_ENST00000393077_GTF2H5_chr6_158613008_ENST00000607778_length(amino acids)=156AA_BP=
MAWATRSGAAMSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVREIPPQSRGMYSNRMRSYKQE

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>98589_98589_2_VTI1A-GTF2H5_VTI1A_chr10_114298089_ENST00000393077_GTF2H5_chr6_158613009_ENST00000607778_length(amino acids)=156AA_BP=
MAWATRSGAAMSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVREIPPQSRGMYSNRMRSYKQE

--------------------------------------------------------------

>98589_98589_3_VTI1A-GTF2H5_VTI1A_chr10_114298089_ENST00000432306_GTF2H5_chr6_158613008_ENST00000607778_length(amino acids)=156AA_BP=
MAWATRSGAAMSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVREIPPQSRGMYSNRMRSYKQE

--------------------------------------------------------------

>98589_98589_4_VTI1A-GTF2H5_VTI1A_chr10_114298089_ENST00000432306_GTF2H5_chr6_158613009_ENST00000607778_length(amino acids)=156AA_BP=
MAWATRSGAAMSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVREIPPQSRGMYSNRMRSYKQE

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