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Center for Computational Systems Medicine
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Kinase Fusion Gene Summary

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Kinase Fusion Gene Sample Information

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Kinase Fusion ORF Analysis

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Kinase Fusion Amino Acid Sequences

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Multiple Sequence Alignment of All Fusion Protein Isoforms

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Kinase Fusion Protein Functional Features

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Kinase Fusion Protein Structures

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Comparison of Fusion Protein Isoforms

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Comparison of Fusion Protein Sequences/Structures with Known Sequences/Structures from PDB

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pLDDT Scores and Difference Analysis of pLDDT Scores Between the Active Sites (Best) and Non-Active Sites.

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Ramachandran Plot of Kinase Fusion Protein Structure

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Potential Active Site Information

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Virtual Screening Results

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Kinase-Substrate Information

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Related Drugs with This Kinase Fusion Protein

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Related Disease with This Kinase Fusion Protein

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Clinical Trials of the Found Drugs/Small Molecules

Kinase Fusion Gene:ERG_MAPK11

Kinase Fusion Protein Summary

check button Kinase Fusion gene summary
Kinase Fusion partner gene informationKinase Fusion gene name: ERG_MAPK11
KinaseFusionDB ID: KFG2146
FusionGDB2.0 ID: KFG2146
HgeneTgene
Gene symbol

ERG

MAPK11

Gene ID

2078

5600

Gene nameETS transcription factor ERGmitogen-activated protein kinase 11
SynonymsLMPHM14|erg-3|p55P38B|P38BETA2|PRKM11|SAPK2|SAPK2B|p38-2|p38Beta
Cytomap

21q22.2

22q13.33

Type of geneprotein-codingprotein-coding
Descriptiontranscriptional regulator ERGERG, ETS transcription factorFUS/ERG fusion proteinTMPRSS2/ERG fusionets-relatedtranscriptional regulator ERG (transforming protein ERG)v-ets avian erythroblastosis virus E26 oncogene homologv-ets avian erythroblastosismitogen-activated protein kinase 11MAP kinase 11MAP kinase p38 betamitogen-activated protein kinase p38 betamitogen-activated protein kinase p38-2stress-activated protein kinase-2stress-activated protein kinase-2b
Modification date2024032320240305
UniProtAcc

Q9Y282

Q15759

Ensembl transtripts involved in fusion geneENST idsENST00000398910, ENST00000398911, 
ENST00000398919, ENST00000417133, 
ENST00000442448, ENST00000398897, 
ENST00000485493, ENST00000288319, 
ENST00000398905, ENST00000398907, 
ENST00000429727, ENST00000453032, 
ENST00000449719, ENST00000495277, 
ENST00000330651, 
Context (manual curation of fusion genes in KinaseFusionDB)

PubMed: ERG [Title/Abstract] AND MAPK11 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0)ERG(39947586)-MAPK11(50706378), # samples:1
check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneERG

GO:0045944

positive regulation of transcription by RNA polymerase II

18195090|23913826

TgeneMAPK11

GO:0031098

stress-activated protein kinase signaling cascade

35857590

TgeneMAPK11

GO:0038066

p38MAPK cascade

10330143

TgeneMAPK11

GO:0051403

stress-activated MAPK cascade

8663524|35857590

TgeneMAPK11

GO:0071347

cellular response to interleukin-1

8663524

TgeneMAPK11

GO:0071493

cellular response to UV-B

35857590


check buttonKinase Fusion gene breakpoints across ERG (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonKinase Fusion gene breakpoints across MAPK11 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.


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Kinase Fusion Gene Sample Information

check buttonKinase Fusion gene information.
check button Kinase Fusion gene information from four resources (ChiTars 5.0, ChimerDB 4.0, COSMIC, and CCLE)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceSampleHgeneHchrHbpTgeneTchrTbp
ChimerDB4TCGA-63-7022-01AERGchr21

39947586

MAPK11chr22

50706378



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Kinase Fusion ORF Analysis


check buttonKinase Fusion information from ORFfinder translation from full-length transcript sequence from KinaseFusionDB.
HenstTenstHgeneHchrHbpTgeneTchrTbpSeq length
(transcript)
Seq length
(amino acids)

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Kinase Fusion Amino Acid Sequences


check button For individual full-length fusion transcript sequence from KinaseFusionDB, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>Henst_Tenst_Hgene_Hchr_Hbp_Tgene_Tchr_Tbp_length(fusion AA)_AAseq

Multiple Sequence Alignment of All Fusion Protein Isoforms



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Kinase Fusion Protein Functional Features


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/:39947586/:50706378)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
ERG

Q9Y282

MAPK11

Q15759

FUNCTION: Possible role in transport between endoplasmic reticulum and Golgi. Positively regulates trafficking of the secretory proteins SERPINA1/alpha1-antitrypsin and HP/haptoglobin (PubMed:31142615). {ECO:0000269|PubMed:31142615}.FUNCTION: Serine/threonine kinase which acts as an essential component of the MAP kinase signal transduction pathway (PubMed:12452429, PubMed:20626350, PubMed:35857590). MAPK11 is one of the four p38 MAPKs which play an important role in the cascades of cellular responses evoked by extracellular stimuli such as pro-inflammatory cytokines or physical stress leading to direct activation of transcription factors (PubMed:12452429, PubMed:20626350, PubMed:35857590). Accordingly, p38 MAPKs phosphorylate a broad range of proteins and it has been estimated that they may have approximately 200 to 300 substrates each (PubMed:12452429, PubMed:20626350, PubMed:35857590). MAPK11 functions are mostly redundant with those of MAPK14 (PubMed:12452429, PubMed:20626350, PubMed:35857590). Some of the targets are downstream kinases which are activated through phosphorylation and further phosphorylate additional targets (PubMed:12452429, PubMed:20626350). RPS6KA5/MSK1 and RPS6KA4/MSK2 can directly phosphorylate and activate transcription factors such as CREB1, ATF1, the NF-kappa-B isoform RELA/NFKB3, STAT1 and STAT3, but can also phosphorylate histone H3 and the nucleosomal protein HMGN1 (PubMed:9687510). RPS6KA5/MSK1 and RPS6KA4/MSK2 play important roles in the rapid induction of immediate-early genes in response to stress or mitogenic stimuli, either by inducing chromatin remodeling or by recruiting the transcription machinery. On the other hand, two other kinase targets, MAPKAPK2/MK2 and MAPKAPK3/MK3, participate in the control of gene expression mostly at the post-transcriptional level, by phosphorylating ZFP36 (tristetraprolin) and ELAVL1, and by regulating EEF2K, which is important for the elongation of mRNA during translation. MKNK1/MNK1 and MKNK2/MNK2, two other kinases activated by p38 MAPKs, regulate protein synthesis by phosphorylating the initiation factor EIF4E2 (PubMed:11154262). In the cytoplasm, the p38 MAPK pathway is an important regulator of protein turnover. For example, CFLAR is an inhibitor of TNF-induced apoptosis whose proteasome-mediated degradation is regulated by p38 MAPK phosphorylation. Ectodomain shedding of transmembrane proteins is regulated by p38 MAPKs as well. In response to inflammatory stimuli, p38 MAPKs phosphorylate the membrane-associated metalloprotease ADAM17. Such phosphorylation is required for ADAM17-mediated ectodomain shedding of TGF-alpha family ligands, which results in the activation of EGFR signaling and cell proliferation. Additional examples of p38 MAPK substrates are the FGFR1. FGFR1 can be translocated from the extracellular space into the cytosol and nucleus of target cells, and regulates processes such as rRNA synthesis and cell growth. FGFR1 translocation requires p38 MAPK activation. In the nucleus, many transcription factors are phosphorylated and activated by p38 MAPKs in response to different stimuli. Classical examples include ATF1, ATF2, ATF6, ELK1, PTPRH, DDIT3, TP53/p53 and MEF2C and MEF2A (PubMed:9430721, PubMed:10330143, PubMed:15356147). The p38 MAPKs are emerging as important modulators of gene expression by regulating chromatin modifiers and remodelers (PubMed:9430721, PubMed:10330143, PubMed:15356147). The promoters of several genes involved in the inflammatory response, such as IL6, IL8 and IL12B, display a p38 MAPK-dependent enrichment of histone H3 phosphorylation on 'Ser-10' (H3S10ph) in LPS-stimulated myeloid cells. This phosphorylation enhances the accessibility of the cryptic NF-kappa-B-binding sites marking promoters for increased NF-kappa-B recruitment. Phosphorylates NLRP1 downstream of MAP3K20/ZAK in response to UV-B irradiation and ribosome collisions, promoting activation of the NLRP1 inflammasome and pyroptosis (PubMed:35857590). {ECO:0000269|PubMed:10330143, ECO:0000269|PubMed:11154262, ECO:0000269|PubMed:15356147, ECO:0000269|PubMed:35857590, ECO:0000269|PubMed:9430721, ECO:0000269|PubMed:9687510, ECO:0000303|PubMed:12452429, ECO:0000303|PubMed:20626350}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

* Minus value of BPloci means that the break pointn is located before the CDS.

check button - Retained domain in the 5'-partner of fusion protein (protein functional feature from UniProt).
PartnerHgeneeneHbpTgeneeneTbpENSTBPexonTotalExonProtein feature lociBPlociTotalLenFeatureNote


check button - Retained domain in the 3'-partner of fusion protein (protein functional feature from UniProt).
PartnerHgeneeneHbpTgeneeneTbpENSTBPexonTotalExonProtein feature lociBPlociTotalLenFeatureNote


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Kinase-Substrate Information of ERG_MAPK11


check button Phosphorylation target of the kinase
(phosphosite, 03-17-2024)
KinaseKinase UniProt AccKinase speciesSubstrateSubstrate UniProt AccSubstrate phosphorylated residuesSubstrate phosphorylated sites (+/-7AA)Domain
MAPK11Q15759humanEP300Q09472S12VVEPGPPsAkRPKLs
MAPK11Q15759humanATF2P15336T69sVIVADQtPtPtRFL
MAPK11Q15759humanATF2P15336T71IVADQtPtPtRFLkN
MAPK11Q15759humanSOD2P04179T79ALAKGDVtAQIALQPSod_Fe_N
MAPK11Q15759humanMAPK11Q15759T241RIMEVVGtPsPEVLAPkinase
MAPK11Q15759humanSNX27Q96L92S51VRIVksEsGYGFNVRPDZ
MAPK11Q15759humanEEF2KO00418S396TFDsLPssPssAtPH
MAPK11Q15759humanHSF1Q00613S307EPPsPPQsPRVEEAsVert_HS_TF
MAPK11Q15759humanRPTORQ8N122S771SASSTLGsPENEEHI
MAPK11Q15759humanE2F1Q01094T433DCDFGDLtPLDF___
MAPK11Q15759humanEGFRP00533S1039tPLLSsLsAtsNNst
MAPK11Q15759humanRPTORQ8N122S863LtQsAPAsPtNkGVH
MAPK11Q15759humanMAPKAPK5Q8IW41T182IDQGDLMtPQFtPyYPkinase
MAPK11Q15759humanMAPK11Q15759S261HARTYIQsLPPMPQKPkinase
MAPK11Q15759humanNLRP1Q9C000S107PSEPHLGsPSQPTST
MAPK11Q15759humanCDC25BP30305S249kMEVEELsPLALGRFM-inducer_phosp
MAPK11Q15759humanHSF1Q00613S303RVkEEPPsPPQsPRVVert_HS_TF
MAPK11Q15759humanKAT5Q92993-2T106VEVVsPAtPVPSETA
MAPK11Q15759humanHNF4AP41235S167VLSRQItsPVsGING
MAPK11Q15759humanSOD2P04179S106SIFWTNLsPNGGGEPSod_Fe_N
MAPK11Q15759humanEGFRP00533T1041LLSsLsAtsNNstVA
MAPK11Q15759humanATF7P17544T51sVIIADQtPtPtRFL
MAPK11Q15759humanGYS1P13807S727StPsEPLsPtssLGE
MAPK11Q15759humanHSF1Q00613S326ssVDtLLsPTALIDsVert_HS_TF
MAPK11Q15759humanGYS1P13807T721AtsssLStPsEPLsP
MAPK11Q15759humanPRKCEQ02156S350RsKsAPtsPCDQEIK
MAPK11Q15759humanGYS1P13807S653PsLsRHssPHQsEDEGlycogen_syn
MAPK11Q15759humanGYS1P13807S645RPAsVPPsPsLsRHsGlycogen_syn
MAPK11Q15759humanSREBF1P36956S63AGGtDPAsPDTSSPG
MAPK11Q15759humanE2F1Q01094S403PEEFISLsPPHEALD
MAPK11Q15759humanEWSR1Q01844T79QPPTGYTtPTAPQAY
MAPK11Q15759humanSREBF1P36956T426TEVEDTLtPPPsDAG
MAPK11Q15759humanCCND3P30281T283QGPsQtstPtDVtAI
MAPK11Q15759humanKAT5Q92993T158VEVVsPAtPVPSETA
MAPK11Q15759humanNR3C1P04150S226IDENCLLsPLAGEDDGCR


check button Biological Network Integration of This Kinase and Substrates
(GeneMANIA website)

check button Enriched GO biological processes of the phosphorylation target genes of the kinase
KinaseGOIDGO termP.adjust
MAPK11IDDescription0.00e+00
MAPK11GO:0036293response to decreased oxygen levels3.56e-05
MAPK11GO:0045787positive regulation of cell cycle3.56e-05
MAPK11GO:0070482response to oxygen levels3.56e-05
MAPK11GO:0009314response to radiation1.20e-04
MAPK11GO:0001666response to hypoxia2.13e-04
MAPK11GO:0031667response to nutrient levels2.13e-04
MAPK11GO:0019216regulation of lipid metabolic process3.64e-04
MAPK11GO:0071230cellular response to amino acid stimulus4.23e-04
MAPK11GO:0034284response to monosaccharide4.77e-04
MAPK11GO:0071229cellular response to acid chemical5.07e-04
MAPK11GO:0009743response to carbohydrate6.69e-04
MAPK11GO:0009410response to xenobiotic stimulus8.04e-04
MAPK11GO:0045444fat cell differentiation8.04e-04
MAPK11GO:0031669cellular response to nutrient levels8.04e-04
MAPK11GO:0090068positive regulation of cell cycle process9.08e-04
MAPK11GO:0071392cellular response to estradiol stimulus9.08e-04
MAPK11GO:0043200response to amino acid9.55e-04
MAPK11GO:0045931positive regulation of mitotic cell cycle9.59e-04
MAPK11GO:0031668cellular response to extracellular stimulus1.02e-03
MAPK11GO:0001101response to acid chemical1.26e-03
MAPK11GO:0045834positive regulation of lipid metabolic process1.34e-03
MAPK11GO:0009411response to UV1.51e-03
MAPK11GO:0062197cellular response to chemical stress1.51e-03
MAPK11GO:1902895positive regulation of miRNA transcription1.57e-03
MAPK11GO:0036294cellular response to decreased oxygen levels1.58e-03
MAPK11GO:0071214cellular response to abiotic stimulus1.65e-03
MAPK11GO:0104004cellular response to environmental stimulus1.65e-03
MAPK11GO:0062012regulation of small molecule metabolic process1.66e-03
MAPK11GO:0071496cellular response to external stimulus1.79e-03
MAPK11GO:0046686response to cadmium ion1.79e-03
MAPK11GO:0071453cellular response to oxygen levels1.79e-03
MAPK11GO:0030522intracellular receptor signaling pathway1.79e-03
MAPK11GO:0072331signal transduction by p53 class mediator1.79e-03
MAPK11GO:0009267cellular response to starvation1.89e-03
MAPK11GO:0071478cellular response to radiation1.92e-03
MAPK11GO:2000630positive regulation of miRNA metabolic process1.95e-03
MAPK11GO:0006109regulation of carbohydrate metabolic process2.09e-03
MAPK11GO:0046890regulation of lipid biosynthetic process2.09e-03
MAPK11GO:0009749response to glucose2.21e-03
MAPK11GO:1902893regulation of miRNA transcription2.28e-03
MAPK11GO:0009746response to hexose2.28e-03
MAPK11GO:0061614miRNA transcription2.28e-03
MAPK11GO:0007623circadian rhythm2.43e-03
MAPK11GO:0071233cellular response to leucine2.43e-03
MAPK11GO:0071493cellular response to UV-B2.43e-03
MAPK11GO:1901654response to ketone2.51e-03
MAPK11GO:0071361cellular response to ethanol2.75e-03
MAPK11GO:0042594response to starvation2.88e-03
MAPK11GO:0010867positive regulation of triglyceride biosynthetic process3.07e-03

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Related Drugs to ERG_MAPK11


check button Drugs used for this fusion-positive patient.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDrugSourcePMID

check button Distribution of the number of studies mentioning ERG-MAPK11 and kinase inhibitors the PubMed Abstract (04-01-2024)

Fusion gene - drug pair 1Fusion gene - drug pair 2PMIDPublication dateDOIStudy title

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Related Diseases to ERG_MAPK11


check button Diseases that have this fusion gene.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDiseaseSourcePMID

check button Related diseases from the literature mentioned this fusion gene and drug.
(PubMed, 04-01-2024)
MeSH IDMeSH term

check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneERGC0033578Prostatic Neoplasms7CTD_human
HgeneERGC0376358Malignant neoplasm of prostate7CTD_human


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Clinical Trials of the Found Drugs/Small Molecules


check button Statistics of the Clinical Trials of the Found Kinase Inibitors from clinicaltrials.gov (06-17-2024)

check button Clinical Trials from clinicaltrials.gov (06-17-2024)

Fusion GeneKinase InhibitorNCT IDStudy StatusPhasesDisease# EnrolmentDate