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Center for Computational Systems Medicine
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Kinase Fusion Gene Summary

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Kinase Fusion Gene Sample Information

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Kinase Fusion ORF Analysis

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Kinase Fusion Amino Acid Sequences

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Multiple Sequence Alignment of All Fusion Protein Isoforms

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Kinase Fusion Protein Functional Features

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Kinase Fusion Protein Structures

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Comparison of Fusion Protein Isoforms

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Comparison of Fusion Protein Sequences/Structures with Known Sequences/Structures from PDB

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pLDDT Scores and Difference Analysis of pLDDT Scores Between the Active Sites (Best) and Non-Active Sites.

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Ramachandran Plot of Kinase Fusion Protein Structure

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Potential Active Site Information

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Virtual Screening Results

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Kinase-Substrate Information

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Related Drugs with This Kinase Fusion Protein

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Related Disease with This Kinase Fusion Protein

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Clinical Trials of the Found Drugs/Small Molecules

Kinase Fusion Gene:HSPD1_ROCK2

Kinase Fusion Protein Summary

check button Kinase Fusion gene summary
Kinase Fusion partner gene informationKinase Fusion gene name: HSPD1_ROCK2
KinaseFusionDB ID: KFG2772
FusionGDB2.0 ID: KFG2772
HgeneTgene
Gene symbol

HSPD1

ROCK2

Gene ID

3329

9475

Gene nameheat shock protein family D (Hsp60) member 1Rho associated coiled-coil containing protein kinase 2
SynonymsCPN60|GROEL|HLD4|HSP-60|HSP60|HSP65|HuCHA60|SPG13ROCK-II
Cytomap

2q33.1

2p25.1

Type of geneprotein-codingprotein-coding
Description60 kDa heat shock protein, mitochondrial60 kDa chaperoninP60 lymphocyte proteinchaperonin 60epididymis secretory sperm binding proteinheat shock 60kDa protein 1 (chaperonin)heat shock protein 65mitochondrial matrix protein P1short heat shock proterho-associated protein kinase 2p164 ROCK-2rho-associated, coiled-coil-containing protein kinase II
Modification date2024041320240403
UniProtAcc

P10809

O75116

Ensembl transtripts involved in fusion geneENST idsENST00000345042, ENST00000388968, 
ENST00000544407, 
ENST00000315872, 
ENST00000401753, ENST00000462366, 
Context (manual curation of fusion genes in KinaseFusionDB)

PubMed: HSPD1 [Title/Abstract] AND ROCK2 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0)HSPD1(198351526)-ROCK2(11372270), # samples:1
check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneHSPD1

GO:0002755

MyD88-dependent toll-like receptor signaling pathway

16148103

HgeneHSPD1

GO:0002842

positive regulation of T cell mediated immune response to tumor cell

10663613

HgeneHSPD1

GO:0006919

activation of cysteine-type endopeptidase activity involved in apoptotic process

17823127

HgeneHSPD1

GO:0006986

response to unfolded protein

11050098

HgeneHSPD1

GO:0032727

positive regulation of interferon-alpha production

17164250

HgeneHSPD1

GO:0032729

positive regulation of type II interferon production

17164250

HgeneHSPD1

GO:0032729

positive regulation of type II interferon production

17164250

HgeneHSPD1

GO:0032733

positive regulation of interleukin-10 production

16148103

HgeneHSPD1

GO:0032735

positive regulation of interleukin-12 production

17164250

HgeneHSPD1

GO:0032755

positive regulation of interleukin-6 production

16148103

HgeneHSPD1

GO:0042026

protein refolding

11050098

HgeneHSPD1

GO:0042100

B cell proliferation

16148103

HgeneHSPD1

GO:0042110

T cell activation

15371451|17164250

HgeneHSPD1

GO:0042113

B cell activation

16148103

HgeneHSPD1

GO:0043032

positive regulation of macrophage activation

17164250

HgeneHSPD1

GO:0044406

adhesion of symbiont to host

20633027

HgeneHSPD1

GO:0048291

isotype switching to IgG isotypes

16148103

HgeneHSPD1

GO:0050870

positive regulation of T cell activation

16148103|17164250

TgeneROCK2

GO:0006468

protein phosphorylation

18559669


check buttonKinase Fusion gene breakpoints across HSPD1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonKinase Fusion gene breakpoints across ROCK2 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.


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Kinase Fusion Gene Sample Information

check buttonKinase Fusion gene information.
check button Kinase Fusion gene information from four resources (ChiTars 5.0, ChimerDB 4.0, COSMIC, and CCLE)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceSampleHgeneHchrHbpTgeneTchrTbp
ChiTaRS5.0BI855783HSPD1chr2

198351526

ROCK2chr2

11372270



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Kinase Fusion ORF Analysis


check buttonKinase Fusion information from ORFfinder translation from full-length transcript sequence from KinaseFusionDB.
HenstTenstHgeneHchrHbpTgeneTchrTbpSeq length
(transcript)
Seq length
(amino acids)

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Kinase Fusion Amino Acid Sequences


check button For individual full-length fusion transcript sequence from KinaseFusionDB, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>Henst_Tenst_Hgene_Hchr_Hbp_Tgene_Tchr_Tbp_length(fusion AA)_AAseq

Multiple Sequence Alignment of All Fusion Protein Isoforms



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Kinase Fusion Protein Functional Features


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/:198351526/:11372270)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
HSPD1

P10809

ROCK2

O75116

FUNCTION: Chaperonin implicated in mitochondrial protein import and macromolecular assembly. Together with Hsp10, facilitates the correct folding of imported proteins. May also prevent misfolding and promote the refolding and proper assembly of unfolded polypeptides generated under stress conditions in the mitochondrial matrix (PubMed:1346131, PubMed:11422376). The functional units of these chaperonins consist of heptameric rings of the large subunit Hsp60, which function as a back-to-back double ring. In a cyclic reaction, Hsp60 ring complexes bind one unfolded substrate protein per ring, followed by the binding of ATP and association with 2 heptameric rings of the co-chaperonin Hsp10. This leads to sequestration of the substrate protein in the inner cavity of Hsp60 where, for a certain period of time, it can fold undisturbed by other cell components. Synchronous hydrolysis of ATP in all Hsp60 subunits results in the dissociation of the chaperonin rings and the release of ADP and the folded substrate protein (Probable). {ECO:0000269|PubMed:11422376, ECO:0000269|PubMed:1346131, ECO:0000305|PubMed:25918392}.FUNCTION: Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. Involved in regulation of smooth muscle contraction, actin cytoskeleton organization, stress fiber and focal adhesion formation, neurite retraction, cell adhesion and motility via phosphorylation of ADD1, BRCA2, CNN1, EZR, DPYSL2, EP300, MSN, MYL9/MLC2, NPM1, RDX, PPP1R12A and VIM. Phosphorylates SORL1 and IRF4. Acts as a negative regulator of VEGF-induced angiogenic endothelial cell activation. Positively regulates the activation of p42/MAPK1-p44/MAPK3 and of p90RSK/RPS6KA1 during myogenic differentiation. Plays an important role in the timely initiation of centrosome duplication. Inhibits keratinocyte terminal differentiation. May regulate closure of the eyelids and ventral body wall through organization of actomyosin bundles. Plays a critical role in the regulation of spine and synaptic properties in the hippocampus. Plays an important role in generating the circadian rhythm of the aortic myofilament Ca(2+) sensitivity and vascular contractility by modulating the myosin light chain phosphorylation. {ECO:0000269|PubMed:10579722, ECO:0000269|PubMed:15699075, ECO:0000269|PubMed:16574662, ECO:0000269|PubMed:17015463, ECO:0000269|PubMed:19131646, ECO:0000269|PubMed:19997641, ECO:0000269|PubMed:21084279, ECO:0000269|PubMed:21147781}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

* Minus value of BPloci means that the break pointn is located before the CDS.

check button - Retained domain in the 5'-partner of fusion protein (protein functional feature from UniProt).
PartnerHgeneeneHbpTgeneeneTbpENSTBPexonTotalExonProtein feature lociBPlociTotalLenFeatureNote


check button - Retained domain in the 3'-partner of fusion protein (protein functional feature from UniProt).
PartnerHgeneeneHbpTgeneeneTbpENSTBPexonTotalExonProtein feature lociBPlociTotalLenFeatureNote


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Kinase-Substrate Information of HSPD1_ROCK2


check button Phosphorylation target of the kinase
(phosphosite, 03-17-2024)
KinaseKinase UniProt AccKinase speciesSubstrateSubstrate UniProt AccSubstrate phosphorylated residuesSubstrate phosphorylated sites (+/-7AA)Domain
ROCK2O75116humanSLC9A1P19634T653LRsYNRHtLVADPyENEXCaM_BD
ROCK2O75116humanBACE1P56817S498DDFADDIsLLk____
ROCK2O75116humanMYL2P10916S15KRAGGANsNVFsMFE
ROCK2O75116humanPPP1R14AQ96A00T38QkRHARVtVkYDRREPP1_inhibitor
ROCK2O75116humanROCK2O75116S1374MkIQQNQsIRRPsRQ
ROCK2O75116humanSH3GL2Q99962T14KKQFHKAtQKVSEKVBAR
ROCK2O75116humanROCK2O75116S1366ARssPRtsMkIQQNQ
ROCK2O75116humanLIMK2P53671T505NDRKKRYtVVGNPYWPK_Tyr_Ser-Thr
ROCK2O75116humanVIMP08670S72ssAVrLrssVPGVRLFilament_head
ROCK2O75116humanEEF1A1P68104T432AVRDMrQtVAVGVIkGTP_EFTU_D3
ROCK2O75116humanPPP1R12AO14974T696ARQsRRstQGVtLtD
ROCK2O75116humanROCK2O75116S1379NQsIRRPsRQLAPNK
ROCK2O75116humanNCF1P14598S345QARPGPQsPGsPLEE
ROCK2O75116humanSORL1Q92673S2206APMITGFsDDVPMVI
ROCK2O75116humanDPYSL2Q16555T555DNIPRRttQRIVAPP
ROCK2O75116humanNFATC1O95644S241PRHsPSTsPRAsVTE
ROCK2O75116humanDAB2P98082S723KPAPRQVsLPVTkst
ROCK2O75116humanAPPP05067-4T654MLKKKQYtsIHHGVVAPP_amyloid
ROCK2O75116humanCNN3Q15417S293QGtGTNGsEIsDSDy
ROCK2O75116humanPPP1R14BQ96C90T57VRRQGKVtVkYDRKEPP1_inhibitor


check button Biological Network Integration of This Kinase and Substrates
(GeneMANIA website)

check button Enriched GO biological processes of the phosphorylation target genes of the kinase
KinaseGOIDGO termP.adjust
ROCK2IDDescription0.00e+00
ROCK2GO:1901653cellular response to peptide8.73e-04
ROCK2GO:0034205amyloid-beta formation6.19e-03
ROCK2GO:0050435amyloid-beta metabolic process6.19e-03
ROCK2GO:0042987amyloid precursor protein catabolic process6.19e-03
ROCK2GO:1905245regulation of aspartic-type peptidase activity6.19e-03
ROCK2GO:0031032actomyosin structure organization6.19e-03
ROCK2GO:0071394cellular response to testosterone stimulus6.19e-03
ROCK2GO:1902946protein localization to early endosome6.19e-03
ROCK2GO:1905668positive regulation of protein localization to endosome6.19e-03
ROCK2GO:1905666regulation of protein localization to endosome6.58e-03
ROCK2GO:0016049cell growth7.19e-03
ROCK2GO:1903651positive regulation of cytoplasmic transport7.38e-03
ROCK2GO:0042982amyloid precursor protein metabolic process7.49e-03
ROCK2GO:0007176regulation of epidermal growth factor-activated receptor activity1.03e-02
ROCK2GO:0043500muscle adaptation1.20e-02
ROCK2GO:0002026regulation of the force of heart contraction1.70e-02
ROCK2GO:0036010protein localization to endosome1.72e-02
ROCK2GO:0043393regulation of protein binding1.72e-02
ROCK2GO:1903649regulation of cytoplasmic transport2.18e-02
ROCK2GO:0010613positive regulation of cardiac muscle hypertrophy2.48e-02
ROCK2GO:0014742positive regulation of muscle hypertrophy2.50e-02
ROCK2GO:0003180aortic valve morphogenesis2.59e-02
ROCK2GO:0071364cellular response to epidermal growth factor stimulus2.59e-02
ROCK2GO:1990000amyloid fibril formation2.59e-02
ROCK2GO:0031345negative regulation of cell projection organization2.59e-02
ROCK2GO:0003176aortic valve development2.59e-02
ROCK2GO:0014002astrocyte development2.59e-02
ROCK2GO:1904646cellular response to amyloid-beta2.59e-02
ROCK2GO:0003012muscle system process2.59e-02
ROCK2GO:0033173calcineurin-NFAT signaling cascade2.59e-02
ROCK2GO:0033574response to testosterone2.59e-02
ROCK2GO:0070849response to epidermal growth factor2.59e-02
ROCK2GO:0043666regulation of phosphoprotein phosphatase activity2.59e-02
ROCK2GO:1905314semi-lunar valve development2.59e-02
ROCK2GO:0097720calcineurin-mediated signaling2.59e-02
ROCK2GO:1902003regulation of amyloid-beta formation2.59e-02
ROCK2GO:0098927vesicle-mediated transport between endosomal compartments2.60e-02
ROCK2GO:1901888regulation of cell junction assembly2.60e-02
ROCK2GO:0044788modulation by host of viral process2.60e-02
ROCK2GO:0010810regulation of cell-substrate adhesion2.77e-02
ROCK2GO:1904645response to amyloid-beta2.77e-02
ROCK2GO:1902991regulation of amyloid precursor protein catabolic process2.91e-02
ROCK2GO:0061097regulation of protein tyrosine kinase activity2.95e-02
ROCK2GO:0061462protein localization to lysosome3.27e-02
ROCK2GO:0003179heart valve morphogenesis3.27e-02
ROCK2GO:0010921regulation of phosphatase activity3.27e-02
ROCK2GO:0090257regulation of muscle system process3.27e-02
ROCK2GO:0051893regulation of focal adhesion assembly3.27e-02
ROCK2GO:0090109regulation of cell-substrate junction assembly3.27e-02

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Related Drugs to HSPD1_ROCK2


check button Drugs used for this fusion-positive patient.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDrugSourcePMID

check button Distribution of the number of studies mentioning HSPD1-ROCK2 and kinase inhibitors the PubMed Abstract (04-01-2024)

Fusion gene - drug pair 1Fusion gene - drug pair 2PMIDPublication dateDOIStudy title

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Related Diseases to HSPD1_ROCK2


check button Diseases that have this fusion gene.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDiseaseSourcePMID

check button Related diseases from the literature mentioned this fusion gene and drug.
(PubMed, 04-01-2024)
MeSH IDMeSH term

check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource


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Clinical Trials of the Found Drugs/Small Molecules


check button Statistics of the Clinical Trials of the Found Kinase Inibitors from clinicaltrials.gov (06-17-2024)

check button Clinical Trials from clinicaltrials.gov (06-17-2024)

Fusion GeneKinase InhibitorNCT IDStudy StatusPhasesDisease# EnrolmentDate