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Center for Computational Systems Medicine
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Kinase Fusion Gene Summary

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Kinase Fusion Gene Sample Information

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Kinase Fusion ORF Analysis

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Kinase Fusion Amino Acid Sequences

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Multiple Sequence Alignment of All Fusion Protein Isoforms

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Kinase Fusion Protein Functional Features

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Kinase Fusion Protein Structures

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Comparison of Fusion Protein Isoforms

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Comparison of Fusion Protein Sequences/Structures with Known Sequences/Structures from PDB

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pLDDT Scores and Difference Analysis of pLDDT Scores Between the Active Sites (Best) and Non-Active Sites.

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Ramachandran Plot of Kinase Fusion Protein Structure

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Potential Active Site Information

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Virtual Screening Results

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Kinase-Substrate Information

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Related Drugs with This Kinase Fusion Protein

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Related Disease with This Kinase Fusion Protein

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Clinical Trials of the Found Drugs/Small Molecules

Kinase Fusion Gene:MAP2K2_CAMKK1

Kinase Fusion Protein Summary

check button Kinase Fusion gene summary
Kinase Fusion partner gene informationKinase Fusion gene name: MAP2K2_CAMKK1
KinaseFusionDB ID: KFG3289
FusionGDB2.0 ID: KFG3289
HgeneTgene
Gene symbol

MAP2K2

CAMKK1

Gene ID

5605

84254

Gene namemitogen-activated protein kinase kinase 2calcium/calmodulin dependent protein kinase kinase 1
SynonymsCFC4|MAPKK2|MEK2|MKK2|PRKMK2CAMKKA
Cytomap

19p13.3

17p13.2

Type of geneprotein-codingprotein-coding
Descriptiondual specificity mitogen-activated protein kinase kinase 2ERK activator kinase 2MAP kinase kinase 2MAPK/ERK kinase 2mitogen-activated protein kinase kinase 2, p45calcium/calmodulin-dependent protein kinase kinase 1CAMKK alpha proteincaM-KK 1caM-KK alphacaM-kinase IV kinasecaM-kinase kinase 1caM-kinase kinase alphacaMKK 1calcium/calmodulin-dependent protein kinase kinase 1, alphacalcium/calmodulin-dependen
Modification date2024041120240305
UniProtAcc

P36507

Q8N5S9

Ensembl transtripts involved in fusion geneENST idsENST00000262948, ENST00000394867, 
ENST00000599345, 
ENST00000158166, 
ENST00000348335, ENST00000381771, 
ENST00000381769, 
Context (manual curation of fusion genes in KinaseFusionDB)

PubMed: MAP2K2 [Title/Abstract] AND CAMKK1 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0)MAP2K2(4110507)-CAMKK1(3789024), # samples:3
check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneMAP2K2

GO:0036289

peptidyl-serine autophosphorylation

8388392

HgeneMAP2K2

GO:0071902

positive regulation of protein serine/threonine kinase activity

8388392


check buttonKinase Fusion gene breakpoints across MAP2K2 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonKinase Fusion gene breakpoints across CAMKK1 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.


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Kinase Fusion Gene Sample Information

check buttonKinase Fusion gene information.
check button Kinase Fusion gene information from four resources (ChiTars 5.0, ChimerDB 4.0, COSMIC, and CCLE)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceSampleHgeneHchrHbpTgeneTchrTbp
ChimerDB4TCGA-AQ-A0Y5-01AMAP2K2chr19

4110507

CAMKK1chr17

3789024



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Kinase Fusion ORF Analysis


check buttonKinase Fusion information from ORFfinder translation from full-length transcript sequence from KinaseFusionDB.
HenstTenstHgeneHchrHbpTgeneTchrTbpSeq length
(transcript)
Seq length
(amino acids)

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Kinase Fusion Amino Acid Sequences


check button For individual full-length fusion transcript sequence from KinaseFusionDB, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>Henst_Tenst_Hgene_Hchr_Hbp_Tgene_Tchr_Tbp_length(fusion AA)_AAseq

Multiple Sequence Alignment of All Fusion Protein Isoforms



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Kinase Fusion Protein Functional Features


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/:4110507/:3789024)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
MAP2K2

P36507

CAMKK1

Q8N5S9

FUNCTION: Catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in a Thr-Glu-Tyr sequence located in MAP kinases. Activates the ERK1 and ERK2 MAP kinases (By similarity). Activates BRAF in a KSR1 or KSR2-dependent manner; by binding to KSR1 or KSR2 releases the inhibitory intramolecular interaction between KSR1 or KSR2 protein kinase and N-terminal domains which promotes KSR1 or KSR2-BRAF dimerization and BRAF activation (PubMed:29433126). {ECO:0000250|UniProtKB:Q63932, ECO:0000269|PubMed:29433126}.FUNCTION: Calcium/calmodulin-dependent protein kinase that belongs to a proposed calcium-triggered signaling cascade involved in a number of cellular processes. Phosphorylates CAMK1, CAMK1D, CAMK1G and CAMK4. Involved in regulating cell apoptosis. Promotes cell survival by phosphorylating AKT1/PKB that inhibits pro-apoptotic BAD/Bcl2-antagonist of cell death. {ECO:0000269|PubMed:12935886}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

* Minus value of BPloci means that the break pointn is located before the CDS.

check button - Retained domain in the 5'-partner of fusion protein (protein functional feature from UniProt).
PartnerHgeneeneHbpTgeneeneTbpENSTBPexonTotalExonProtein feature lociBPlociTotalLenFeatureNote


check button - Retained domain in the 3'-partner of fusion protein (protein functional feature from UniProt).
PartnerHgeneeneHbpTgeneeneTbpENSTBPexonTotalExonProtein feature lociBPlociTotalLenFeatureNote


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Kinase-Substrate Information of MAP2K2_CAMKK1


check button Phosphorylation target of the kinase
(phosphosite, 03-17-2024)
KinaseKinase UniProt AccKinase speciesSubstrateSubstrate UniProt AccSubstrate phosphorylated residuesSubstrate phosphorylated sites (+/-7AA)Domain
CAMKK1Q8N5S9humanPRKAA1Q13131T183sDGEFLRtsCGsPNyPkinase
CAMKK1Q8N5S9humanCAMK1DQ8IU85T180GkGDVMstACGTPGYPkinase
CAMKK1Q8N5S9humanCAMK4Q16566S12TVPSCSAssCSSVTA
CAMKK1Q8N5S9humanCAMK4Q16566T200EHQVLMktVCGtPGYPkinase
CAMKK1Q8N5S9humanBRSK1Q8TDC3-2T205VGDSLLEtSCGsPHYPkinase
CAMKK1Q8N5S9humanCAMK4Q16566S13VPSCSAssCSSVTAS
CAMKK1Q8N5S9humanCAMK1Q14012T177DPGsVLstACGTPGYPkinase
MAP2K2P36507humanKRT8P05787S74tVNQsLLsPLVLEVDKeratin_2_head
MAP2K2P36507humanMAPK3P27361T202HDHtGFLtEyVAtRWPkinase
MAP2K2P36507humanMAPK3P27361Y204HtGFLtEyVAtRWyrPkinase


check button Biological Network Integration of This Kinase and Substrates
(GeneMANIA website)

check button Enriched GO biological processes of the phosphorylation target genes of the kinase
KinaseGOIDGO termP.adjust
CAMKK1IDDescription0.00e+00
CAMKK1GO:0018105peptidyl-serine phosphorylation2.14e-07
CAMKK1GO:0018209peptidyl-serine modification2.14e-07
CAMKK1GO:0010975regulation of neuron projection development1.69e-02
CAMKK1GO:0009411response to UV4.36e-02
CAMKK1GO:0010976positive regulation of neuron projection development4.36e-02
CAMKK1GO:0090316positive regulation of intracellular protein transport4.36e-02
CAMKK1GO:0032388positive regulation of intracellular transport4.40e-02
CAMKK1GO:0033157regulation of intracellular protein transport4.40e-02
CAMKK1GO:0016358dendrite development4.40e-02
CAMKK1GO:0007611learning or memory4.40e-02
CAMKK1GO:0051222positive regulation of protein transport4.40e-02
CAMKK1GO:0045542positive regulation of cholesterol biosynthetic process4.40e-02
CAMKK1GO:0106120positive regulation of sterol biosynthetic process4.40e-02
CAMKK1GO:1903943regulation of hepatocyte apoptotic process4.40e-02
CAMKK1GO:1904179positive regulation of adipose tissue development4.40e-02
CAMKK1GO:0050890cognition4.40e-02
CAMKK1GO:0009416response to light stimulus4.40e-02
CAMKK1GO:1904951positive regulation of establishment of protein localization4.40e-02
CAMKK1GO:0038183bile acid signaling pathway4.40e-02
CAMKK1GO:0099004calmodulin dependent kinase signaling pathway4.40e-02
CAMKK1GO:0032386regulation of intracellular transport4.40e-02
CAMKK1GO:0032782bile acid secretion4.40e-02
CAMKK1GO:2000303regulation of ceramide biosynthetic process4.40e-02
CAMKK1GO:0031346positive regulation of cell projection organization4.40e-02
CAMKK1GO:0071361cellular response to ethanol4.40e-02
CAMKK1GO:0090153regulation of sphingolipid biosynthetic process4.40e-02
CAMKK1GO:1905038regulation of membrane lipid metabolic process4.40e-02
CAMKK1GO:0031000response to caffeine4.40e-02
CAMKK1GO:0090205positive regulation of cholesterol metabolic process4.40e-02
CAMKK1GO:0032793positive regulation of CREB transcription factor activity4.40e-02
CAMKK1GO:0071380cellular response to prostaglandin E stimulus4.40e-02
CAMKK1GO:0097091synaptic vesicle clustering4.40e-02
CAMKK1GO:1904177regulation of adipose tissue development4.40e-02
CAMKK1GO:2000758positive regulation of peptidyl-lysine acetylation4.40e-02
CAMKK1GO:0006677glycosylceramide metabolic process4.40e-02
CAMKK1GO:0055089fatty acid homeostasis4.40e-02
CAMKK1GO:0060263regulation of respiratory burst4.40e-02
CAMKK1GO:0009314response to radiation4.40e-02
CAMKK1GO:0006390mitochondrial transcription4.40e-02
CAMKK1GO:0046827positive regulation of protein export from nucleus4.40e-02
CAMKK1GO:0043011myeloid dendritic cell differentiation4.40e-02
CAMKK1GO:0048643positive regulation of skeletal muscle tissue development4.40e-02
CAMKK1GO:0071379cellular response to prostaglandin stimulus4.40e-02
CAMKK1GO:0090043regulation of tubulin deacetylation4.40e-02
CAMKK1GO:0097284hepatocyte apoptotic process4.40e-02
CAMKK1GO:0045821positive regulation of glycolytic process4.40e-02
CAMKK1GO:1903829positive regulation of protein localization4.40e-02
CAMKK1GO:0010893positive regulation of steroid biosynthetic process4.40e-02
CAMKK1GO:0061744motor behavior4.40e-02

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Related Drugs to MAP2K2_CAMKK1


check button Drugs used for this fusion-positive patient.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDrugSourcePMID

check button Distribution of the number of studies mentioning MAP2K2-CAMKK1 and kinase inhibitors the PubMed Abstract (04-01-2024)

Fusion gene - drug pair 1Fusion gene - drug pair 2PMIDPublication dateDOIStudy title

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Related Diseases to MAP2K2_CAMKK1


check button Diseases that have this fusion gene.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDiseaseSourcePMID

check button Related diseases from the literature mentioned this fusion gene and drug.
(PubMed, 04-01-2024)
MeSH IDMeSH term

check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource


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Clinical Trials of the Found Drugs/Small Molecules


check button Statistics of the Clinical Trials of the Found Kinase Inibitors from clinicaltrials.gov (06-17-2024)

check button Clinical Trials from clinicaltrials.gov (06-17-2024)

Fusion GeneKinase InhibitorNCT IDStudy StatusPhasesDisease# EnrolmentDate