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Center for Computational Systems Medicine
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Kinase Fusion Gene Summary

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Kinase Fusion Gene Sample Information

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Kinase Fusion ORF Analysis

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Kinase Fusion Amino Acid Sequences

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Multiple Sequence Alignment of All Fusion Protein Isoforms

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Kinase Fusion Protein Functional Features

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Kinase Fusion Protein Structures

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Comparison of Fusion Protein Isoforms

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Comparison of Fusion Protein Sequences/Structures with Known Sequences/Structures from PDB

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pLDDT Scores and Difference Analysis of pLDDT Scores Between the Active Sites (Best) and Non-Active Sites.

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Ramachandran Plot of Kinase Fusion Protein Structure

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Potential Active Site Information

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Virtual Screening Results

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Kinase-Substrate Information

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Related Drugs with This Kinase Fusion Protein

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Related Disease with This Kinase Fusion Protein

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Clinical Trials of the Found Drugs/Small Molecules

Kinase Fusion Gene:NDUFA7_PRKCG

Kinase Fusion Protein Summary

check button Kinase Fusion gene summary
Kinase Fusion partner gene informationKinase Fusion gene name: NDUFA7_PRKCG
KinaseFusionDB ID: KFG4089
FusionGDB2.0 ID: KFG4089
HgeneTgene
Gene symbol

NDUFA7

PRKCG

Gene ID

4701

5582

Gene nameNADH:ubiquinone oxidoreductase subunit A7protein kinase C gamma
SynonymsB14.5a|CI-B14.5aPKC-gamma|PKCC|PKCG|PKCI(3)|PKCgamma|SCA14
Cytomap

19p13.2

19q13.42

Type of geneprotein-codingprotein-coding
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDaNADH-ubiquinone oxidoreductase subunit B14.5acomplex I B14.5a subunitprotein kinase C gamma type
Modification date2024041120240403
UniProtAcc

O95182

P05129

Ensembl transtripts involved in fusion geneENST idsENST00000301457, ENST00000598884, 
ENST00000263431, ENST00000536044, 
ENST00000540413, ENST00000542049, 
Context (manual curation of fusion genes in KinaseFusionDB)

PubMed: NDUFA7 [Title/Abstract] AND PRKCG [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0)NDUFA7(8381380)-PRKCG(54406327), # samples:4
check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgenePRKCG

GO:0016310

phosphorylation

15808853

TgenePRKCG

GO:0031397

negative regulation of protein ubiquitination

15808853

TgenePRKCG

GO:0032425

positive regulation of mismatch repair

15808853

TgenePRKCG

GO:0042177

negative regulation of protein catabolic process

15808853


check buttonKinase Fusion gene breakpoints across NDUFA7 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonKinase Fusion gene breakpoints across PRKCG (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.


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Kinase Fusion Gene Sample Information

check buttonKinase Fusion gene information.
check button Kinase Fusion gene information from four resources (ChiTars 5.0, ChimerDB 4.0, COSMIC, and CCLE)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceSampleHgeneHchrHbpTgeneTchrTbp
ChimerDB4TCGA-D6-6515-01ANDUFA7chr19

8381380

PRKCGchr19

54406327

ChimerDB4TCGA-D6-6515NDUFA7chr19

8381379

PRKCGchr19

54406326



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Kinase Fusion ORF Analysis


check buttonKinase Fusion information from ORFfinder translation from full-length transcript sequence from KinaseFusionDB.
HenstTenstHgeneHchrHbpTgeneTchrTbpSeq length
(transcript)
Seq length
(amino acids)

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Kinase Fusion Amino Acid Sequences


check button For individual full-length fusion transcript sequence from KinaseFusionDB, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>Henst_Tenst_Hgene_Hchr_Hbp_Tgene_Tchr_Tbp_length(fusion AA)_AAseq

Multiple Sequence Alignment of All Fusion Protein Isoforms



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Kinase Fusion Protein Functional Features


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/:8381380/:54406327)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
NDUFA7

O95182

PRKCG

P05129

FUNCTION: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. {ECO:0000269|PubMed:27626371}.FUNCTION: Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that plays diverse roles in neuronal cells and eye tissues, such as regulation of the neuronal receptors GRIA4/GLUR4 and GRIN1/NMDAR1, modulation of receptors and neuronal functions related to sensitivity to opiates, pain and alcohol, mediation of synaptic function and cell survival after ischemia, and inhibition of gap junction activity after oxidative stress. Binds and phosphorylates GRIA4/GLUR4 glutamate receptor and regulates its function by increasing plasma membrane-associated GRIA4 expression. In primary cerebellar neurons treated with the agonist 3,5-dihyidroxyphenylglycine, functions downstream of the metabotropic glutamate receptor GRM5/MGLUR5 and phosphorylates GRIN1/NMDAR1 receptor which plays a key role in synaptic plasticity, synaptogenesis, excitotoxicity, memory acquisition and learning. May be involved in the regulation of hippocampal long-term potentiation (LTP), but may be not necessary for the process of synaptic plasticity. May be involved in desensitization of mu-type opioid receptor-mediated G-protein activation in the spinal cord, and may be critical for the development and/or maintenance of morphine-induced reinforcing effects in the limbic forebrain. May modulate the functionality of mu-type-opioid receptors by participating in a signaling pathway which leads to the phosphorylation and degradation of opioid receptors. May also contributes to chronic morphine-induced changes in nociceptive processing. Plays a role in neuropathic pain mechanisms and contributes to the maintenance of the allodynia pain produced by peripheral inflammation. Plays an important role in initial sensitivity and tolerance to ethanol, by mediating the behavioral effects of ethanol as well as the effects of this drug on the GABA(A) receptors. During and after cerebral ischemia modulate neurotransmission and cell survival in synaptic membranes, and is involved in insulin-induced inhibition of necrosis, an important mechanism for minimizing ischemic injury. Required for the elimination of multiple climbing fibers during innervation of Purkinje cells in developing cerebellum. Is activated in lens epithelial cells upon hydrogen peroxide treatment, and phosphorylates connexin-43 (GJA1/CX43), resulting in disassembly of GJA1 gap junction plaques and inhibition of gap junction activity which could provide a protective effect against oxidative stress (By similarity). Phosphorylates p53/TP53 and promotes p53/TP53-dependent apoptosis in response to DNA damage. Involved in the phase resetting of the cerebral cortex circadian clock during temporally restricted feeding. Stabilizes the core clock component BMAL1 by interfering with its ubiquitination, thus suppressing its degradation, resulting in phase resetting of the cerebral cortex clock (By similarity). {ECO:0000250|UniProtKB:P63318, ECO:0000250|UniProtKB:P63319, ECO:0000269|PubMed:16377624}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

* Minus value of BPloci means that the break pointn is located before the CDS.

check button - Retained domain in the 5'-partner of fusion protein (protein functional feature from UniProt).
PartnerHgeneeneHbpTgeneeneTbpENSTBPexonTotalExonProtein feature lociBPlociTotalLenFeatureNote


check button - Retained domain in the 3'-partner of fusion protein (protein functional feature from UniProt).
PartnerHgeneeneHbpTgeneeneTbpENSTBPexonTotalExonProtein feature lociBPlociTotalLenFeatureNote


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Kinase-Substrate Information of NDUFA7_PRKCG


check button Phosphorylation target of the kinase
(phosphosite, 03-17-2024)
KinaseKinase UniProt AccKinase speciesSubstrateSubstrate UniProt AccSubstrate phosphorylated residuesSubstrate phosphorylated sites (+/-7AA)Domain
PRKCGP05129humanHSP90AA1P07900T115GtIAksGtkAFMEALHATPase_c
PRKCGP05129humanDNAJC5Q9H3Z4S34TSDDIKKsYRKLALkDnaJ
PRKCGP05129humanMAPTP10636-8S352DFKDrVQskIGsLDNTubulin-binding
PRKCGP05129humanDAB2P98082S24QAAPKAPsKKEKKKG
PRKCGP05129humanKCNC4Q03721S9ISSVCVssYRGRKsGPotassium_chann
PRKCGP05129humanKCNC4Q03721S21KsGNKPPsKTCLKEEPotassium_chann
PRKCGP05129humanHSP90AA1P07900T425KkCLELFtELAEDkEHSP90
PRKCGP05129humanMAPTP10636-8S324kVTskCGsLGNIHHkTubulin-binding
PRKCGP05129humanCHATP28329-3S440VPTYESAsIRRFQEGCarn_acyltransf
PRKCGP05129humanCHATP28329-3S347LKHVTQssRKLIRADCarn_acyltransf
PRKCGP05129humanNGFRP08138S277IAFKRWNsCKQNKQGTNFR_16_TM
PRKCGP05129humanCHATP28329-3T255TVLVKDStNRDSLDMCarn_acyltransf
PRKCGP05129humanMAPTP10636-8S293NVQskCGsKDNIkHVTubulin-binding
PRKCGP05129humanGSK3AP49840S21sGrARtssFAEPGGG
PRKCGP05129humanMAPTP10636-8S258PDLkNVKskIGstENTubulin-binding
PRKCGP05129humanKCNC4Q03721S8MISSVCVssYRGRKsPotassium_chann
PRKCGP05129humanNADKO95544S64kEFRRtRsLHGPCPV
PRKCGP05129humanKIR3DL1P43629S415QRKITRPsQRPKtPP
PRKCGP05129humanGSK3BP49841S9SGRPRttsFAEsCkP
PRKCGP05129humanTRPC3Q13507T646LQISLGRtVKDIFKFIon_trans
PRKCGP05129humanMMP14P50281T567FFFRRHGtPRRLLyCDUF3377
PRKCGP05129humanRPS6KB2Q9UBS0S473PPSGTKKsKRGRGRP
PRKCGP05129humanARHGEF7Q14155S518LSASPRMsGFIYQGKPH
PRKCGP05129humanGRK2P25098S29ATPAARAskkILLPE
PRKCGP05129humanC5AR1P21730S334sVVREsKsFTRsTVD
PRKCGP05129humanKCNC4Q03721S15ssYRGRKsGNKPPsKPotassium_chann
PRKCGP05129humanDNAJC5Q9H3Z4S10DQRQRsLstsGEsLy
PRKCGP05129humanAPTXQ7Z2E3T125AKNPGLEtHRKRKRs
PRKCGP05129humanCD5P06127T434MsFHRNHtAtVRsHA
PRKCGP05129humanCHATP28329-3S476HKAAVPAsEKLLLLKCarn_acyltransf
PRKCGP05129humanHSP90AA1P07900T603PCCIVtstyGWtANMHSP90
PRKCGP05129humanCHATP28329-3S346LLKHVTQssRKLIRACarn_acyltransf
PRKCGP05129humanARHGEF7Q14155S761DSLGRRSsLsRLEPS
PRKCGP05129humanCD5P06127T436FHRNHtAtVRsHAEN
PRKCGP05129humanNADKO95544S46RGRAKsrsLsAsPAL


check button Biological Network Integration of This Kinase and Substrates
(GeneMANIA website)

check button Enriched GO biological processes of the phosphorylation target genes of the kinase
KinaseGOIDGO termP.adjust
PRKCGIDDescription0.00e+00
PRKCGGO:0045862positive regulation of proteolysis9.91e-04
PRKCGGO:1903829positive regulation of protein localization2.48e-03
PRKCGGO:0016049cell growth2.48e-03
PRKCGGO:0018105peptidyl-serine phosphorylation2.48e-03
PRKCGGO:0018209peptidyl-serine modification2.48e-03
PRKCGGO:0009266response to temperature stimulus4.07e-03
PRKCGGO:1902074response to salt4.07e-03
PRKCGGO:0034605cellular response to heat4.83e-03
PRKCGGO:0032388positive regulation of intracellular transport4.83e-03
PRKCGGO:0070874negative regulation of glycogen metabolic process4.83e-03
PRKCGGO:0001558regulation of cell growth4.83e-03
PRKCGGO:0045732positive regulation of protein catabolic process4.85e-03
PRKCGGO:0010810regulation of cell-substrate adhesion5.17e-03
PRKCGGO:1901030positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway5.17e-03
PRKCGGO:1902947regulation of tau-protein kinase activity5.70e-03
PRKCGGO:0048588developmental cell growth6.01e-03
PRKCGGO:0090257regulation of muscle system process6.42e-03
PRKCGGO:0032436positive regulation of proteasomal ubiquitin-dependent protein catabolic process6.76e-03
PRKCGGO:1900034regulation of cellular response to heat6.91e-03
PRKCGGO:0009408response to heat8.24e-03
PRKCGGO:2000060positive regulation of ubiquitin-dependent protein catabolic process1.03e-02
PRKCGGO:1901800positive regulation of proteasomal protein catabolic process1.05e-02
PRKCGGO:0051222positive regulation of protein transport1.05e-02
PRKCGGO:0007006mitochondrial membrane organization1.05e-02
PRKCGGO:0048675axon extension1.05e-02
PRKCGGO:0010811positive regulation of cell-substrate adhesion1.05e-02
PRKCGGO:0072655establishment of protein localization to mitochondrion1.05e-02
PRKCGGO:0003323type B pancreatic cell development1.05e-02
PRKCGGO:1904951positive regulation of establishment of protein localization1.05e-02
PRKCGGO:0048143astrocyte activation1.05e-02
PRKCGGO:0070585protein localization to mitochondrion1.05e-02
PRKCGGO:1901028regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway1.05e-02
PRKCGGO:1905523positive regulation of macrophage migration1.05e-02
PRKCGGO:0032386regulation of intracellular transport1.05e-02
PRKCGGO:1903052positive regulation of proteolysis involved in protein catabolic process1.11e-02
PRKCGGO:0090090negative regulation of canonical Wnt signaling pathway1.11e-02
PRKCGGO:0032434regulation of proteasomal ubiquitin-dependent protein catabolic process1.11e-02
PRKCGGO:1900180regulation of protein localization to nucleus1.11e-02
PRKCGGO:0031346positive regulation of cell projection organization1.11e-02
PRKCGGO:0031589cell-substrate adhesion1.11e-02
PRKCGGO:0003309type B pancreatic cell differentiation1.14e-02
PRKCGGO:0042176regulation of protein catabolic process1.14e-02
PRKCGGO:0005979regulation of glycogen biosynthetic process1.14e-02
PRKCGGO:0010962regulation of glucan biosynthetic process1.14e-02
PRKCGGO:0010821regulation of mitochondrion organization1.14e-02
PRKCGGO:0019082viral protein processing1.14e-02
PRKCGGO:0099171presynaptic modulation of chemical synaptic transmission1.14e-02
PRKCGGO:0090316positive regulation of intracellular protein transport1.21e-02
PRKCGGO:0070507regulation of microtubule cytoskeleton organization1.25e-02

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Related Drugs to NDUFA7_PRKCG


check button Drugs used for this fusion-positive patient.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDrugSourcePMID

check button Distribution of the number of studies mentioning NDUFA7-PRKCG and kinase inhibitors the PubMed Abstract (04-01-2024)

Fusion gene - drug pair 1Fusion gene - drug pair 2PMIDPublication dateDOIStudy title

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Related Diseases to NDUFA7_PRKCG


check button Diseases that have this fusion gene.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDiseaseSourcePMID

check button Related diseases from the literature mentioned this fusion gene and drug.
(PubMed, 04-01-2024)
MeSH IDMeSH term

check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource


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Clinical Trials of the Found Drugs/Small Molecules


check button Statistics of the Clinical Trials of the Found Kinase Inibitors from clinicaltrials.gov (06-17-2024)

check button Clinical Trials from clinicaltrials.gov (06-17-2024)

Fusion GeneKinase InhibitorNCT IDStudy StatusPhasesDisease# EnrolmentDate