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Center for Computational Systems Medicine
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Kinase Fusion Gene Summary

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Kinase Fusion Gene Sample Information

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Kinase Fusion ORF Analysis

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Kinase Fusion Amino Acid Sequences

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Multiple Sequence Alignment of All Fusion Protein Isoforms

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Kinase Fusion Protein Functional Features

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Kinase Fusion Protein Structures

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Comparison of Fusion Protein Isoforms

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Comparison of Fusion Protein Sequences/Structures with Known Sequences/Structures from PDB

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pLDDT Scores and Difference Analysis of pLDDT Scores Between the Active Sites (Best) and Non-Active Sites.

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Ramachandran Plot of Kinase Fusion Protein Structure

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Potential Active Site Information

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Virtual Screening Results

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Kinase-Substrate Information

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Related Drugs with This Kinase Fusion Protein

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Related Disease with This Kinase Fusion Protein

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Clinical Trials of the Found Drugs/Small Molecules

Kinase Fusion Gene:BAG6_MASTL

Kinase Fusion Protein Summary

check button Kinase Fusion gene summary
Kinase Fusion partner gene informationKinase Fusion gene name: BAG6_MASTL
KinaseFusionDB ID: KFG544
FusionGDB2.0 ID: KFG544
HgeneTgene
Gene symbol

BAG6

MASTL

Gene ID

7917

84930

Gene nameBAG cochaperone 6microtubule associated serine/threonine kinase like
SynonymsBAG-6|BAT3|D6S52E|G3GREATWALL|GW|GWL|MAST-L|THC2
Cytomap

6p21.33

10p12.1

Type of geneprotein-codingprotein-coding
Descriptionlarge proline-rich protein BAG6BAG family molecular chaperone regulator 6BCL2 associated athanogene 6HLA-B-associated transcript 3large proline-rich protein BAT3protein G3protein Scythescytheserine/threonine-protein kinase greatwallgreatwall kinase homologgreatwall protein kinase
Modification date2024041120240403
UniProtAcc

P46379

Q96GX5

Ensembl transtripts involved in fusion geneENST idsENST00000211379, ENST00000361076, 
ENST00000362049, ENST00000375964, 
ENST00000375976, ENST00000383446, 
ENST00000383448, ENST00000404765, 
ENST00000412012, ENST00000413922, 
ENST00000415345, ENST00000415373, 
ENST00000417144, ENST00000419847, 
ENST00000422756, ENST00000425649, 
ENST00000434446, ENST00000439687, 
ENST00000442479, ENST00000443182, 
ENST00000444402, ENST00000449450, 
ENST00000451932, ENST00000454478, 
ENST00000460147, ENST00000460429, 
ENST00000461852, ENST00000463220, 
ENST00000470875, ENST00000471376, 
ENST00000497694, ENST00000546462, 
ENST00000550393, ENST00000551350, 
ENST00000552116, ENST00000552467, 
ENST00000552605, 
ENST00000375946, 
ENST00000342386, ENST00000375940, 
ENST00000477034, 
Context (manual curation of fusion genes in KinaseFusionDB)

PubMed: BAG6 [Title/Abstract] AND MASTL [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0)BAG6(31620466)-MASTL(27444109), # samples:1
check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneBAG6

GO:0002429

immune response-activating cell surface receptor signaling pathway

18852879

HgeneBAG6

GO:0006511

ubiquitin-dependent protein catabolic process

20676083

HgeneBAG6

GO:0006620

post-translational protein targeting to endoplasmic reticulum membrane

25535373

HgeneBAG6

GO:0006915

apoptotic process

14960581

HgeneBAG6

GO:0018393

internal peptidyl-lysine acetylation

17403783

HgeneBAG6

GO:0030101

natural killer cell activation

18852879

HgeneBAG6

GO:0031647

regulation of protein stability

21636303

HgeneBAG6

GO:0036503

ERAD pathway

23129660|24981174

HgeneBAG6

GO:0071816

tail-anchored membrane protein insertion into ER membrane

20676083|25535373


check buttonKinase Fusion gene breakpoints across BAG6 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonKinase Fusion gene breakpoints across MASTL (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.


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Kinase Fusion Gene Sample Information

check buttonKinase Fusion gene information.
check button Kinase Fusion gene information from four resources (ChiTars 5.0, ChimerDB 4.0, COSMIC, and CCLE)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceSampleHgeneHchrHbpTgeneTchrTbp
ChiTaRS5.0AF179033BAG6chr6

31620466

MASTLchr10

27444109



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Kinase Fusion ORF Analysis


check buttonKinase Fusion information from ORFfinder translation from full-length transcript sequence from KinaseFusionDB.
HenstTenstHgeneHchrHbpTgeneTchrTbpSeq length
(transcript)
Seq length
(amino acids)

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Kinase Fusion Amino Acid Sequences


check button For individual full-length fusion transcript sequence from KinaseFusionDB, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>Henst_Tenst_Hgene_Hchr_Hbp_Tgene_Tchr_Tbp_length(fusion AA)_AAseq

Multiple Sequence Alignment of All Fusion Protein Isoforms



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Kinase Fusion Protein Functional Features


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/:31620466/:27444109)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
BAG6

P46379

MASTL

Q96GX5

FUNCTION: ATP-independent molecular chaperone preventing the aggregation of misfolded and hydrophobic patches-containing proteins (PubMed:21636303). Functions as part of a cytosolic protein quality control complex, the BAG6/BAT3 complex, which maintains these client proteins in a soluble state and participates in their proper delivery to the endoplasmic reticulum or alternatively can promote their sorting to the proteasome where they undergo degradation (PubMed:20516149, PubMed:21636303, PubMed:21743475, PubMed:28104892). The BAG6/BAT3 complex is involved in the post-translational delivery of tail-anchored/type II transmembrane proteins to the endoplasmic reticulum membrane. Recruited to ribosomes, it interacts with the transmembrane region of newly synthesized tail-anchored proteins and together with SGTA and ASNA1 mediates their delivery to the endoplasmic reticulum (PubMed:20516149, PubMed:20676083, PubMed:28104892, PubMed:25535373). Client proteins that cannot be properly delivered to the endoplasmic reticulum are ubiquitinated by RNF126, an E3 ubiquitin-protein ligase associated with BAG6 and are sorted to the proteasome (PubMed:24981174, PubMed:28104892, PubMed:27193484). SGTA which prevents the recruitment of RNF126 to BAG6 may negatively regulate the ubiquitination and the proteasomal degradation of client proteins (PubMed:23129660, PubMed:25179605, PubMed:27193484). Similarly, the BAG6/BAT3 complex also functions as a sorting platform for proteins of the secretory pathway that are mislocalized to the cytosol either delivering them to the proteasome for degradation or to the endoplasmic reticulum (PubMed:21743475). The BAG6/BAT3 complex also plays a role in the endoplasmic reticulum-associated degradation (ERAD), a quality control mechanism that eliminates unwanted proteins of the endoplasmic reticulum through their retrotranslocation to the cytosol and their targeting to the proteasome. It maintains these retrotranslocated proteins in an unfolded yet soluble state condition in the cytosol to ensure their proper delivery to the proteasome (PubMed:21636303). BAG6 is also required for selective ubiquitin-mediated degradation of defective nascent chain polypeptides by the proteasome. In this context, it may participate in the production of antigenic peptides and play a role in antigen presentation in immune response (By similarity). BAG6 is also involved in endoplasmic reticulum stress-induced pre-emptive quality control, a mechanism that selectively attenuates the translocation of newly synthesized proteins into the endoplasmic reticulum and reroutes them to the cytosol for proteasomal degradation. BAG6 may ensure the proper degradation of these proteins and thereby protects the endoplasmic reticulum from protein overload upon stress (PubMed:26565908). By inhibiting the polyubiquitination and subsequent proteasomal degradation of HSPA2 it may also play a role in the assembly of the synaptonemal complex during spermatogenesis (By similarity). Also positively regulates apoptosis by interacting with and stabilizing the proapoptotic factor AIFM1 (By similarity). By controlling the steady-state expression of the IGF1R receptor, indirectly regulates the insulin-like growth factor receptor signaling pathway (PubMed:26692333). {ECO:0000250|UniProtKB:Q9Z1R2, ECO:0000269|PubMed:20516149, ECO:0000269|PubMed:20676083, ECO:0000269|PubMed:21636303, ECO:0000269|PubMed:21743475, ECO:0000269|PubMed:23129660, ECO:0000269|PubMed:24981174, ECO:0000269|PubMed:25179605, ECO:0000269|PubMed:26565908, ECO:0000269|PubMed:26692333, ECO:0000269|PubMed:27193484, ECO:0000269|PubMed:28104892}.; FUNCTION: Involved in DNA damage-induced apoptosis: following DNA damage, accumulates in the nucleus and forms a complex with p300/EP300, enhancing p300/EP300-mediated p53/TP53 acetylation leading to increase p53/TP53 transcriptional activity (PubMed:17403783). When nuclear, may also act as a component of some chromatin regulator complex that regulates histone 3 'Lys-4' dimethylation (H3K4me2) (PubMed:18765639). {ECO:0000269|PubMed:17403783, ECO:0000269|PubMed:18765639}.; FUNCTION: Released extracellularly via exosomes, it is a ligand of the natural killer/NK cells receptor NCR3 and stimulates NK cells cytotoxicity. It may thereby trigger NK cells cytotoxicity against neighboring tumor cells and immature myeloid dendritic cells (DC). {ECO:0000269|PubMed:18055229, ECO:0000269|PubMed:18852879}.; FUNCTION: Mediates ricin-induced apoptosis. {ECO:0000269|PubMed:14960581}.FUNCTION: Serine/threonine kinase that plays a key role in M phase by acting as a regulator of mitosis entry and maintenance. Acts by promoting the inactivation of protein phosphatase 2A (PP2A) during M phase: does not directly inhibit PP2A but acts by mediating phosphorylation and subsequent activation of ARPP19 and ENSA at 'Ser-62' and 'Ser-67', respectively. ARPP19 and ENSA are phosphatase inhibitors that specifically inhibit the PPP2R2D (PR55-delta) subunit of PP2A. Inactivation of PP2A during M phase is essential to keep cyclin-B1-CDK1 activity high. Following DNA damage, it is also involved in checkpoint recovery by being inhibited. Phosphorylates histone protein in vitro; however such activity is unsure in vivo. May be involved in megakaryocyte differentiation. {ECO:0000269|PubMed:12890928, ECO:0000269|PubMed:19680222, ECO:0000269|PubMed:19793917, ECO:0000269|PubMed:20538976, ECO:0000269|PubMed:20818157}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

* Minus value of BPloci means that the break pointn is located before the CDS.

check button - Retained domain in the 5'-partner of fusion protein (protein functional feature from UniProt).
PartnerHgeneeneHbpTgeneeneTbpENSTBPexonTotalExonProtein feature lociBPlociTotalLenFeatureNote


check button - Retained domain in the 3'-partner of fusion protein (protein functional feature from UniProt).
PartnerHgeneeneHbpTgeneeneTbpENSTBPexonTotalExonProtein feature lociBPlociTotalLenFeatureNote


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Kinase-Substrate Information of BAG6_MASTL


check button Phosphorylation target of the kinase
(phosphosite, 03-17-2024)
KinaseKinase UniProt AccKinase speciesSubstrateSubstrate UniProt AccSubstrate phosphorylated residuesSubstrate phosphorylated sites (+/-7AA)Domain
MASTLQ96GX5humanENSAO43768S67kGQkyFDsGDyNMAkEndosulfine
MASTLQ96GX5humanARPP19P56211S62kGQkyFDsGDyNMAkEndosulfine


check button Biological Network Integration of This Kinase and Substrates
(GeneMANIA website)

check button Enriched GO biological processes of the phosphorylation target genes of the kinase
KinaseGOIDGO termP.adjust
MASTLIDDescription0.00e+00
MASTLGO:0035308negative regulation of protein dephosphorylation9.69e-05
MASTLGO:0035305negative regulation of dephosphorylation9.69e-05
MASTLGO:0035304regulation of protein dephosphorylation3.18e-04
MASTLGO:0035303regulation of dephosphorylation4.53e-04
MASTLGO:0000086G2/M transition of mitotic cell cycle6.34e-04
MASTLGO:0044839cell cycle G2/M phase transition6.48e-04
MASTLGO:0006470protein dephosphorylation9.54e-04
MASTLGO:0016311dephosphorylation1.85e-03
MASTLGO:0045936negative regulation of phosphate metabolic process2.31e-03
MASTLGO:0010563negative regulation of phosphorus metabolic process2.31e-03
MASTLGO:0031400negative regulation of protein modification process2.82e-03
MASTLGO:0044772mitotic cell cycle phase transition2.99e-03
MASTLGO:0045722positive regulation of gluconeogenesis9.93e-03
MASTLGO:0046326positive regulation of glucose import1.62e-02
MASTLGO:0010828positive regulation of glucose transmembrane transport1.73e-02
MASTLGO:0010907positive regulation of glucose metabolic process1.73e-02
MASTLGO:0006111regulation of gluconeogenesis1.91e-02
MASTLGO:0046324regulation of glucose import2.05e-02
MASTLGO:0046323glucose import2.37e-02
MASTLGO:0010827regulation of glucose transmembrane transport2.37e-02
MASTLGO:0045913positive regulation of carbohydrate metabolic process2.37e-02
MASTLGO:0006094gluconeogenesis2.48e-02
MASTLGO:0019319hexose biosynthetic process2.48e-02
MASTLGO:0046364monosaccharide biosynthetic process2.48e-02
MASTLGO:0010906regulation of glucose metabolic process2.48e-02
MASTLGO:0043255regulation of carbohydrate biosynthetic process2.48e-02
MASTLGO:1904659glucose transmembrane transport2.60e-02
MASTLGO:0008645hexose transmembrane transport2.60e-02
MASTLGO:0015749monosaccharide transmembrane transport2.60e-02
MASTLGO:0034219carbohydrate transmembrane transport2.78e-02
MASTLGO:0062013positive regulation of small molecule metabolic process2.90e-02
MASTLGO:0007584response to nutrient2.95e-02
MASTLGO:0008643carbohydrate transport2.95e-02
MASTLGO:0050796regulation of insulin secretion2.97e-02
MASTLGO:0006109regulation of carbohydrate metabolic process3.06e-02
MASTLGO:0006006glucose metabolic process3.06e-02
MASTLGO:0090276regulation of peptide hormone secretion3.06e-02
MASTLGO:0002791regulation of peptide secretion3.06e-02
MASTLGO:0030073insulin secretion3.06e-02
MASTLGO:0090087regulation of peptide transport3.06e-02
MASTLGO:0016051carbohydrate biosynthetic process3.16e-02
MASTLGO:0034764positive regulation of transmembrane transport3.16e-02
MASTLGO:0019318hexose metabolic process3.31e-02
MASTLGO:0030072peptide hormone secretion3.31e-02
MASTLGO:0002790peptide secretion3.31e-02
MASTLGO:0046883regulation of hormone secretion3.31e-02
MASTLGO:0005996monosaccharide metabolic process3.31e-02
MASTLGO:0015833peptide transport3.31e-02
MASTLGO:0050708regulation of protein secretion3.31e-02

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Related Drugs to BAG6_MASTL


check button Drugs used for this fusion-positive patient.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDrugSourcePMID

check button Distribution of the number of studies mentioning BAG6-MASTL and kinase inhibitors the PubMed Abstract (04-01-2024)

Fusion gene - drug pair 1Fusion gene - drug pair 2PMIDPublication dateDOIStudy title

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Related Diseases to BAG6_MASTL


check button Diseases that have this fusion gene.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDiseaseSourcePMID

check button Related diseases from the literature mentioned this fusion gene and drug.
(PubMed, 04-01-2024)
MeSH IDMeSH term

check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource


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Clinical Trials of the Found Drugs/Small Molecules


check button Statistics of the Clinical Trials of the Found Kinase Inibitors from clinicaltrials.gov (06-17-2024)

check button Clinical Trials from clinicaltrials.gov (06-17-2024)

Fusion GeneKinase InhibitorNCT IDStudy StatusPhasesDisease# EnrolmentDate