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Center for Computational Systems Medicine
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Fusion Gene and Fusion Protein Summary

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Fusion Amino Acid Sequences (multiple BPs and multiple gene isoforms)

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Fusion Protein Breakpoint Sequences - (for the Screening of the FusionNeoAntigens)

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Potential FusionNeoAntigens in HLA I - (netMHCpan v4.1 + deepHLApan v1.1)

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Potential FusionNeoAntigens in HLA II - (netMHCIIpan v4.1)

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Fusion Breakpoint 14 AA Peptide Structure - (RoseTTAFold)

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Filtering FusionNeoAntigens Through Checking the Interaction with HLAs in 3D - (Glide)

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Vaccine Design for the FusionNeoAntigens (RNA/protein sequences)

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Potential target of CAR-T therapy development

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Information on the samples that have these potential fusion neoantigens

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Fusion Protein Targeting Drugs - (Manual Curation)

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Fusion Protein Related diseases - (Manual Curation)

Fusion Protein:ABCC4-PCCA

Fusion Gene and Fusion Protein Summary

check button Fusion gene summary
Fusion partner gene informationFusion gene name: ABCC4-PCCA
FusionPDB ID: 282
FusionGDB2.0 ID: 282
HgeneTgene
Gene symbol

ABCC4

PCCA

Gene ID

10257

5095

Gene nameATP binding cassette subfamily C member 4propionyl-CoA carboxylase subunit alpha
SynonymsMOAT-B|MOATB|MRP4-
Cytomap

13q32.1

13q32.3

Type of geneprotein-codingprotein-coding
Descriptionmultidrug resistance-associated protein 4MRP/cMOAT-related ABC transporterbA464I2.1 (ATP-binding cassette, sub-family C (CFTR/MRP), member 4)canalicular multispecific organic anion transporter (ABC superfamily)multi-specific organic anion transporter propionyl-CoA carboxylase alpha chain, mitochondrialPCCase alpha subunitpccA complementation grouppropanoyl-CoA:carbon dioxide ligase alpha subunitpropionyl CoA carboxylase, alpha polypeptidepropionyl Coenzyme A carboxylase, alpha polypeptidepropion
Modification date2020031320200313
UniProtAcc

O15439

Main function of 5'-partner protein: FUNCTION: ATP-dependent transporter of the ATP-binding cassette (ABC) family that actively extrudes physiological compounds and xenobiotics from cells. Transports a range of endogenous molecules that have a key role in cellular communication and signaling, including cyclic nucleotides such as cyclic AMP (cAMP) and cyclic GMP (cGMP), bile acids, steroid conjugates, urate, and prostaglandins (PubMed:11856762, PubMed:12883481, PubMed:12523936, PubMed:12835412, PubMed:15364914, PubMed:15454390, PubMed:16282361, PubMed:17959747, PubMed:18300232, PubMed:26721430). Mediates the ATP-dependent efflux of glutathione conjugates such as leukotriene C4 (LTC4) and leukotriene B4 (LTB4) too. The presence of GSH is necessary for the ATP-dependent transport of LTB4, whereas GSH is not required for the transport of LTC4 (PubMed:17959747). Mediates the cotransport of bile acids with reduced glutathione (GSH) (PubMed:12883481, PubMed:12523936, PubMed:16282361). Transports a wide range of drugs and their metabolites, including anticancer, antiviral and antibiotics molecules (PubMed:11856762, PubMed:12105214, PubMed:15454390, PubMed:18300232, PubMed:17344354). Confers resistance to anticancer agents such as methotrexate (PubMed:11106685). {ECO:0000269|PubMed:11106685, ECO:0000269|PubMed:11856762, ECO:0000269|PubMed:12105214, ECO:0000269|PubMed:12523936, ECO:0000269|PubMed:12835412, ECO:0000269|PubMed:12883481, ECO:0000269|PubMed:15364914, ECO:0000269|PubMed:15454390, ECO:0000269|PubMed:16282361, ECO:0000269|PubMed:17344354, ECO:0000269|PubMed:17959747, ECO:0000269|PubMed:18300232, ECO:0000269|PubMed:26721430}.
.
Ensembl transtripts involved in fusion geneENST idsENST00000538287, ENST00000376887, 
ENST00000412704, ENST00000431522, 
ENST00000536256, ENST00000474158, 
ENST00000376279, ENST00000376285, 
ENST00000376286, ENST00000485946, 
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0)* DoF score23 X 21 X 11=531321 X 22 X 6=2772
# samples 2523
** MAII scorelog2(25/5313*10)=-4.40952671281098
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(23/2772*10)=-3.59122149119284
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Fusion gene context

PubMed: ABCC4 [Title/Abstract] AND PCCA [Title/Abstract] AND fusion [Title/Abstract]

Fusion neoantigen context

PubMed: ABCC4 [Title/Abstract] AND PCCA [Title/Abstract] AND neoantigen [Title/Abstract]

Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0)ABCC4(95858786)-PCCA(100755137), # samples:1
Anticipated loss of major functional domain due to fusion event.ABCC4-PCCA seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
ABCC4-PCCA seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
ABCC4-PCCA seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
ABCC4-PCCA seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneABCC4

GO:0032310

prostaglandin secretion

25173977



check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr13:95858786/chr13:100755137)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonRetention analysis results of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features, are available here.

check buttonFusion gene breakpoints across ABCC4 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across PCCA (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


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Fusion Amino Acid Sequences


check buttonFusion information from ORFfinder translation from full-length transcript sequence from FusionPDB.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000412704ABCC4chr1395858786-ENST00000376279PCCAchr13100755137+3487128011932201033
ENST00000376887ABCC4chr1395858786-ENST00000376279PCCAchr13100755137+3483127611532161033
ENST00000536256ABCC4chr1395858786-ENST00000376279PCCAchr13100755137+326210551192995958
ENST00000431522ABCC4chr1395858786-ENST00000376279PCCAchr13100755137+3487128011932201033

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000412704ENST00000376279ABCC4chr1395858786-PCCAchr13100755137+0.0004367180.9995633
ENST00000376887ENST00000376279ABCC4chr1395858786-PCCAchr13100755137+0.0004354660.99956447
ENST00000536256ENST00000376279ABCC4chr1395858786-PCCAchr13100755137+0.0003897890.99961025
ENST00000431522ENST00000376279ABCC4chr1395858786-PCCAchr13100755137+0.0004367180.9995633

check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.

Get the fusion protein sequences from here.

Fusion protein sequence information is available in the fasta format.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

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Fusion Protein Breakpoint Sequences for ABCC4-PCCA

check button +/-13 AA sequence from the breakpoints of the fusion protein sequences.
HgeneHchrHbpTgeneTchrTbpLength(fusion protein)BP in fusion proteinPeptide
ABCC4chr1395858786PCCAchr131007551371055312RVSEAIVSIRRIQHVLYYSRQCLMVS
ABCC4chr1395858786PCCAchr131007551371276387RVSEAIVSIRRIQHVLYYSRQCLMVS
ABCC4chr1395858786PCCAchr131007551371280387RVSEAIVSIRRIQHVLYYSRQCLMVS

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Potential FusionNeoAntigen Information of ABCC4-PCCA in HLA I

check button Multiple sequence alignments of the potential FusionNeoAntigens per fusion breakpoints. If the MSA is empty, then it means that there were predicted fusion neoantigens in this fusion breakpoint, but those predicted fusion neoantigens were not across the breakpoint, which is not fusion-specific.
ABCC4-PCCA_95858786_100755137.msa

check button Potential FusionNeoAntigen Information
* We used NetMHCpan v4.1 (%rank<0.5) and deepHLApan v1.1 (immunogenic score>0.5)
Fusion geneHchrHbpTgeneTchrTbpHLA IFusionNeoAntigen peptideBinding scoreImmunogenic scoreNeoantigen start (at BP 13)Neoantigen end (at BP 13)
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:02RRIQHVLY0.99990.641917
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:04RRIQHVLY0.99990.7398917
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:05RRIQHVLY0.99990.8888917
ABCC4-PCCAchr1395858786chr131007551371276HLA-B14:01IRRIQHVL0.99850.7262816
ABCC4-PCCAchr1395858786chr131007551371276HLA-B14:02IRRIQHVL0.99850.7262816
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:02RRIQHVLYY0.99990.5813918
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:05RRIQHVLYY0.99990.8684918
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:04RRIQHVLYY0.99980.6915918
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:02IRRIQHVLY0.99510.5774817
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:04IRRIQHVLY0.99150.6812817
ABCC4-PCCAchr1395858786chr131007551371276HLA-A30:08SIRRIQHVL0.93970.7623716
ABCC4-PCCAchr1395858786chr131007551371276HLA-B52:01VSIRRIQHV0.91690.8184615
ABCC4-PCCAchr1395858786chr131007551371276HLA-B15:03RRIQHVLYY0.42050.618918
ABCC4-PCCAchr1395858786chr131007551371276HLA-B15:18RRIQHVLYY0.31860.5678918
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:05RRIQHVLYYS0.99980.8073919
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:04RRIQHVLYYS0.99980.707919
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:05IRRIQHVLYY0.99980.8233818
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:02RRIQHVLYYS0.99980.5515919
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:04IRRIQHVLYY0.99960.5936818
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:05RRIQHVLYYSR0.99990.7142920
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:02RRIQHVLYYSR0.99990.5198920
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:04RRIQHVLYYSR0.99980.6603920
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:05SIRRIQHVLYY0.92570.8357718
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:04SIRRIQHVLYY0.88520.6028718
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:14RRIQHVLY0.99970.7974917
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:05IRRIQHVL0.99910.9703816
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:95RRIQHVLY0.99890.7255917
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:03RRIQHVLY0.99870.9001917
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:27RRIQHVLY0.99860.9456917
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:05RRIQHVLY0.9980.9644917
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:19RRIQHVLY0.99760.6226917
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:80RRIQHVLY0.99750.9391917
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:67RRIQHVLY0.99750.9391917
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:46RRIQHVLY0.99590.8719917
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:10RRIQHVLY0.99570.963917
ABCC4-PCCAchr1395858786chr131007551371276HLA-C12:16RRIQHVLY0.91320.9657917
ABCC4-PCCAchr1395858786chr131007551371276HLA-C15:04VSIRRIQHV0.99950.8148615
ABCC4-PCCAchr1395858786chr131007551371276HLA-C15:06VSIRRIQHV0.99950.8563615
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:14RRIQHVLYY0.99930.77918
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:03RRIQHVLYY0.99870.8821918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:95RRIQHVLYY0.99760.5498918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:27RRIQHVLYY0.99210.9007918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C12:04VSIRRIQHV0.99180.9564615
ABCC4-PCCAchr1395858786chr131007551371276HLA-C06:03VSIRRIQHV0.99180.9298615
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:95IRRIQHVLY0.9850.7113817
ABCC4-PCCAchr1395858786chr131007551371276HLA-C12:12VSIRRIQHV0.98120.8046615
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:29RRIQHVLYY0.98110.8762918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:27IRRIQHVLY0.97820.9492817
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:05RRIQHVLYY0.96780.9237918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:05IRRIQHVLY0.95850.965817
ABCC4-PCCAchr1395858786chr131007551371276HLA-B15:04SIRRIQHVL0.95120.8815716
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:80RRIQHVLYY0.9150.8472918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:67RRIQHVLYY0.9150.8472918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:19IRRIQHVLY0.8840.6265817
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:10RRIQHVLYY0.8820.9226918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:46RRIQHVLYY0.87670.6797918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C02:06VSIRRIQHV0.86950.9144615
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:13RRIQHVLYY0.86020.8208918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:80IRRIQHVLY0.85690.9379817
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:67IRRIQHVLY0.85690.9379817
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:46IRRIQHVLY0.85450.8481817
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:10IRRIQHVLY0.84380.9529817
ABCC4-PCCAchr1395858786chr131007551371276HLA-C03:14RRIQHVLYY0.80210.9613918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C12:16IRRIQHVLY0.12750.9696817
ABCC4-PCCAchr1395858786chr131007551371276HLA-C12:16RRIQHVLYY0.050.9244918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C06:03RRIQHVLYY0.00670.9902918
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:14RRIQHVLYYS0.99980.7463919
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:03RRIQHVLYYS0.99860.8274919
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:03IRRIQHVLYY0.99720.848818
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:27IRRIQHVLYY0.99590.8839818
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:05IRRIQHVLYY0.99240.926818
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:80IRRIQHVLYY0.98230.8731818
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:67IRRIQHVLYY0.98230.8731818
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:10IRRIQHVLYY0.98060.9136818
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:46IRRIQHVLYY0.9750.7027818
ABCC4-PCCAchr1395858786chr131007551371276HLA-C12:16IRRIQHVLYY0.82490.9556818
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:14RRIQHVLYYSR0.99990.6674920
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:03RRIQHVLYYSR0.99820.7341920
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:80SIRRIQHVLYY0.78960.7902718
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:67SIRRIQHVLYY0.78960.7902718
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:10SIRRIQHVLYY0.77130.8158718
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:05SIRRIQHVLYY0.75990.8436718
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:27SIRRIQHVLYY0.74270.8701718
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:46SIRRIQHVLYY0.7380.6367718
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:03SIRRIQHVLYY0.71170.8594718
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:10RRIQHVLY0.99990.8652917
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:08RRIQHVLY0.99990.7627917
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:01RRIQHVLY0.9990.6371917
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:02RRIQHVLY0.99750.9391917
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:17RRIQHVLY0.99710.9605917
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:22RRIQHVLY0.99360.7537917
ABCC4-PCCAchr1395858786chr131007551371276HLA-B15:68RRIQHVLY0.87470.6393917
ABCC4-PCCAchr1395858786chr131007551371276HLA-C06:02RRIQHVLY0.86070.9932917
ABCC4-PCCAchr1395858786chr131007551371276HLA-C06:17RRIQHVLY0.86070.9932917
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:08RRIQHVLYY0.99980.7284918
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:10RRIQHVLYY0.99980.8346918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C15:02VSIRRIQHV0.99970.8336615
ABCC4-PCCAchr1395858786chr131007551371276HLA-C15:05VSIRRIQHV0.99960.8797615
ABCC4-PCCAchr1395858786chr131007551371276HLA-C15:09VSIRRIQHV0.99950.8148615
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:06RRIQHVLYY0.99820.6706918
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:09RRIQHVLYY0.99540.8278918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C16:02VSIRRIQHV0.99370.9905615
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:10IRRIQHVLY0.98970.8414817
ABCC4-PCCAchr1395858786chr131007551371276HLA-C06:02VSIRRIQHV0.98960.9523615
ABCC4-PCCAchr1395858786chr131007551371276HLA-C06:17VSIRRIQHV0.98960.9523615
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:01IRRIQHVLY0.98840.6207817
ABCC4-PCCAchr1395858786chr131007551371276HLA-C16:04VSIRRIQHV0.97820.8781615
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:17RRIQHVLYY0.96630.9283918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C12:03VSIRRIQHV0.96350.8572615
ABCC4-PCCAchr1395858786chr131007551371276HLA-C06:08VSIRRIQHV0.96040.9502615
ABCC4-PCCAchr1395858786chr131007551371276HLA-A30:01SIRRIQHVL0.94510.8067716
ABCC4-PCCAchr1395858786chr131007551371276HLA-C16:01VSIRRIQHV0.9190.9669615
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:02RRIQHVLYY0.9150.8472918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:22RRIQHVLYY0.91380.5649918
ABCC4-PCCAchr1395858786chr131007551371276HLA-B15:73SIRRIQHVL0.89830.839716
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:17IRRIQHVLY0.8920.9643817
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:02IRRIQHVLY0.85690.9379817
ABCC4-PCCAchr1395858786chr131007551371276HLA-B15:30SIRRIQHVL0.84070.7319716
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:22IRRIQHVLY0.78420.7618817
ABCC4-PCCAchr1395858786chr131007551371276HLA-C06:08RRIQHVLYY0.55730.9913918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:04RRIQHVLYY0.51210.7983918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C02:02RRIQHVLYY0.35720.9777918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C02:10RRIQHVLYY0.35720.9777918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C06:08IRRIQHVLY0.28320.9891817
ABCC4-PCCAchr1395858786chr131007551371276HLA-B15:53RRIQHVLYY0.23230.7723918
ABCC4-PCCAchr1395858786chr131007551371276HLA-B48:02RRIQHVLYY0.20680.8645918
ABCC4-PCCAchr1395858786chr131007551371276HLA-B15:54RRIQHVLYY0.07510.7567918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C06:06RRIQHVLYY0.04480.9813918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C03:67RRIQHVLYY0.03710.914918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C06:02IRRIQHVLY0.03060.9945817
ABCC4-PCCAchr1395858786chr131007551371276HLA-C06:17IRRIQHVLY0.03060.9945817
ABCC4-PCCAchr1395858786chr131007551371276HLA-C06:02RRIQHVLYY0.01410.9887918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C06:17RRIQHVLYY0.01410.9887918
ABCC4-PCCAchr1395858786chr131007551371276HLA-C12:02RRIQHVLYY0.00950.9433918
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:08RRIQHVLYYS0.99980.7011919
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:10RRIQHVLYYS0.99980.8265919
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:08IRRIQHVLYY0.99970.6184818
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:10IRRIQHVLYY0.99960.7852818
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:02IRRIQHVLYY0.98230.8731818
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:22IRRIQHVLYY0.9620.6253818
ABCC4-PCCAchr1395858786chr131007551371276HLA-C06:08IRRIQHVLYY0.86680.9854818
ABCC4-PCCAchr1395858786chr131007551371276HLA-C06:02IRRIQHVLYY0.76530.9922818
ABCC4-PCCAchr1395858786chr131007551371276HLA-C06:17IRRIQHVLYY0.76530.9922818
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:10RRIQHVLYYSR0.99990.7815920
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:08RRIQHVLYYSR0.99990.6432920
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:22SIRRIQHVLYY0.89590.5473718
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:10SIRRIQHVLYY0.89160.7862718
ABCC4-PCCAchr1395858786chr131007551371276HLA-B27:08SIRRIQHVLYY0.89020.6297718
ABCC4-PCCAchr1395858786chr131007551371276HLA-C07:02SIRRIQHVLYY0.78960.7902718

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Potential FusionNeoAntigen Information of ABCC4-PCCA in HLA II

check button Multiple sequence alignments of the potential FusionNeoAntigens per fusion breakpoints. If the MSA is empty, then it means that there were predicted fusion neoantigens in this fusion breakpoint, but those predicted fusion neoantigens were not across the breakpoint, which is not fusion-specific.
ABCC4-PCCA_95858786_100755137.msa

check button Potential FusionNeoAntigen Information
* We used NetMHCIIpan v4.1 (%rank<0.5).
Fusion geneHchrHbpTgeneTchrTbpHLA IIFusionNeoAntigen peptideNeoantigen start (at BP 13)Neoantigen end (at BP 13)
ABCC4-PCCAchr1395858786chr131007551371276DRB1-0804SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-0804VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-0804RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-0806RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-0806VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-0812VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-0812SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-0812RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-0820SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-0820VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-0820RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-0822RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-0822VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-0822SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-0828SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-0828VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-0828RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-0831SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-0831VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-0831RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1101SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1101VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1102SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1102VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1103SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1103VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1103RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1104VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1104SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1104RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1106SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1106VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1106RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1108SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1108VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1109SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1109VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1110SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1110VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1112SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1112VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1113SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1113VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1113RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1115SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1115VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1116SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1116VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1117VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1117SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1117RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1118SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1118VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1118RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1119SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1119VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1121SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1121VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1121RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1124SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1124VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1125SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1125VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1125RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1127SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1127VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1128SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1128VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1129SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1129VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1131SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1131VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1132SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1132VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1133SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1133VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1134SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1134VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1134RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1135VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1135SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1135RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1136SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1136VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1138VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1138SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1138RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1139SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1139VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1141SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1141VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1141RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1142SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1142VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1142RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1143VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1143SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1143RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1144VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1144SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1144RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1145SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1146VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1146SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1146RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1147SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1147VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1147RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1148SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1148VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1148RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1149SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1149VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1150SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1150VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1150RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1151SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1151VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1152VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1152SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1152RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1154VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1154SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1154RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1155SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1156SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1156VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1156RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1157SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1157VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1157RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1158VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1158SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1158RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1159SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1159VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1159RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1160VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1160SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1160RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1161SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1161VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1162SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1162VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1163SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1163VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1163RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1165SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1165VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1166SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1166VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1167SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1167VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1167RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1172SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1172VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1174SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1174VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1175SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1175VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1176SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1176VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1176RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1177VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1177SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1177RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1178VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1178SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1178RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1180SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1180VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1183SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1183VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1183RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1184SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1184VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1184RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1185SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1185VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1185RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1187SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1187VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1188SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1188VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1188RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1189SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1189VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1189RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1190SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1190VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1192SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1192VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1192RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1194SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1194VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1195SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1195VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1196SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1196VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1201IVSIRRIQHVLYYSR520
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1201AIVSIRRIQHVLYYS419
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1201VSIRRIQHVLYYSRQ621
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1203IVSIRRIQHVLYYSR520
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1203AIVSIRRIQHVLYYS419
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1203VSIRRIQHVLYYSRQ621
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1204SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1204IVSIRRIQHVLYYSR520
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1204VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1204RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1205IVSIRRIQHVLYYSR520
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1205AIVSIRRIQHVLYYS419
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1205VSIRRIQHVLYYSRQ621
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1206IVSIRRIQHVLYYSR520
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1206AIVSIRRIQHVLYYS419
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1206VSIRRIQHVLYYSRQ621
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1207IVSIRRIQHVLYYSR520
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1207AIVSIRRIQHVLYYS419
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1207VSIRRIQHVLYYSRQ621
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1208IVSIRRIQHVLYYSR520
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1208VSIRRIQHVLYYSRQ621
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1208AIVSIRRIQHVLYYS419
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1209SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1209IVSIRRIQHVLYYSR520
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1209VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1209RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1210IVSIRRIQHVLYYSR520
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1210AIVSIRRIQHVLYYS419
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1210VSIRRIQHVLYYSRQ621
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1211IVSIRRIQHVLYYSR520
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1211AIVSIRRIQHVLYYS419
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1211VSIRRIQHVLYYSRQ621
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1212IVSIRRIQHVLYYSR520
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1212AIVSIRRIQHVLYYS419
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1213IVSIRRIQHVLYYSR520
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1214IVSIRRIQHVLYYSR520
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1214AIVSIRRIQHVLYYS419
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1214VSIRRIQHVLYYSRQ621
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1215IVSIRRIQHVLYYSR520
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1217IVSIRRIQHVLYYSR520
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1217AIVSIRRIQHVLYYS419
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1217VSIRRIQHVLYYSRQ621
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1218IVSIRRIQHVLYYSR520
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1219IVSIRRIQHVLYYSR520
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1222IVSIRRIQHVLYYSR520
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1223IVSIRRIQHVLYYSR520
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1301SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1301VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1304VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1304RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1304SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1305SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1305VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1306SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1306VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1306RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1308SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1308VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1308RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1309SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1309VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1309RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1311VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1311SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1311RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1314SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1314VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1315SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1317SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1318SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1318VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1318RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1319SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1319VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1320SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1320VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1322SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1322VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1324SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1324VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1324RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1326SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1326VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1327SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1327VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1332VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1332RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1332SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1335SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1335VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1342VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1342SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1342RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1343SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1343VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1344SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1344VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1344RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1348VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1348RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1348SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1350SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1350VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1351SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1351VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1352SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1352VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1353SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1353VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1356SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1356VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1357SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1358VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1358SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1358RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1359SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1359VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1361SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1361VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1362SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1362VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1364SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1364VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1368SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1368VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1369SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1369VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1370SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1370VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1370RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1371SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1371VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1371RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1372SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1372VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1372RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1375RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1375VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1375SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1376VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1376SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1376RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1377SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1377IVSIRRIQHVLYYSR520
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1378SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1378VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1379SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1379VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1380SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1380VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1381RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1381VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1381SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1382SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1382VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1383SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1383VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1384SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1384VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1384RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1385SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1385VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1386SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1387SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1387VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1389RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1389VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1391SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1391VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1392SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1392VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1393VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1393RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1393SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1394VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1394RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1394SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1398SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1398VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1405VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1405SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1405RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1406SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1406VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1406RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1408VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1408SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1408RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1411SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1411VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1412SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1412VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1412RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1415SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1415VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1415RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1416SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1417SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1417VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1417RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1418SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1418VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1418RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1420SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1420VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1420RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1421SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1421VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1421RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1423VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1423SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1423RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1427SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1429SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1429VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1429RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1433SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1433VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1433RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1434SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1434VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1434RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1437SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1437VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1437RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1443SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1443VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1443RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1445VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1445SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1445RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1452SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1452VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1456VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1456SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1456RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1459VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1459SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1459RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1464SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1464VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1464RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1465SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1465VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1465RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1467SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1467VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1472SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1472VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1472RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1473RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1473VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1473SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1474VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1474RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1474SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1478SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1478VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1478RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1480SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1480VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1480RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1481SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1481VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1481RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1483SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1483VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1483RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1484SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1484VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1484RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1491VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1491SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1491RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1495SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1495VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1495RVSEAIVSIRRIQHV015
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1496VSEAIVSIRRIQHVL116
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1496SEAIVSIRRIQHVLY217
ABCC4-PCCAchr1395858786chr131007551371276DRB1-1496RVSEAIVSIRRIQHV015

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Fusion breakpoint peptide structures of ABCC4-PCCA

check button3D structures of the fusion breakpoint peptide of 14AA sequence that have potential fusion neoantigens
* The minimum length of the amino acid sequence in RoseTTAFold is 14AA. Here, we predicted the 14AA fusion protein breakpoint sequence not the fusion neoantigen peptide, which is shorter than 14 AA.
File nameBPseqHgeneTgeneHchrHbpTchrTbpAAlen
10266VSIRRIQHVLYYSRABCC4PCCAchr1395858786chr131007551371276

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Filtering FusionNeoAntigens Through Checking the Interaction with HLAs in 3D of ABCC4-PCCA

check buttonVirtual screening between 25 HLAs (from PDB) and FusionNeoAntigens
* We used Glide to predict the interaction between HLAs and neoantigens.
HLA allelePDB IDFile nameBPseqDocking scoreGlide score
HLA-B14:023BVN10266VSIRRIQHVLYYSR-7.9962-8.1096
HLA-B14:023BVN10266VSIRRIQHVLYYSR-5.70842-6.74372
HLA-B52:013W3910266VSIRRIQHVLYYSR-6.83737-6.95077
HLA-B52:013W3910266VSIRRIQHVLYYSR-4.4836-5.5189
HLA-A11:014UQ210266VSIRRIQHVLYYSR-10.0067-10.1201
HLA-A11:014UQ210266VSIRRIQHVLYYSR-9.03915-10.0745
HLA-A24:025HGA10266VSIRRIQHVLYYSR-6.56204-6.67544
HLA-A24:025HGA10266VSIRRIQHVLYYSR-5.42271-6.45801
HLA-B44:053DX810266VSIRRIQHVLYYSR-7.85648-8.89178
HLA-B44:053DX810266VSIRRIQHVLYYSR-5.3978-5.5112
HLA-B35:011A1N10266VSIRRIQHVLYYSR-6.27422-6.38762
HLA-B35:011A1N10266VSIRRIQHVLYYSR-5.27424-6.30954
HLA-A02:016TDR10266VSIRRIQHVLYYSR-3.37154-4.40684

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Vaccine Design for the FusionNeoAntigens of ABCC4-PCCA

check button mRNA and peptide sequences of FusionNeoAntigens that have potential interaction with HLA-Is.
Fusion geneHchrHbpTchrTbpStart in +/-13AAEnd in +/-13AAFusionNeoAntigen peptide sequenceFusionNeoAntigen RNA sequence
ABCC4-PCCAchr1395858786chr13100755137615VSIRRIQHVGTCAGCATCCGAAGAATCCAGCATGTT
ABCC4-PCCAchr1395858786chr13100755137716SIRRIQHVLAGCATCCGAAGAATCCAGCATGTTCTG
ABCC4-PCCAchr1395858786chr13100755137718SIRRIQHVLYYAGCATCCGAAGAATCCAGCATGTTCTGTACTAT
ABCC4-PCCAchr1395858786chr13100755137816IRRIQHVLATCCGAAGAATCCAGCATGTTCTG
ABCC4-PCCAchr1395858786chr13100755137817IRRIQHVLYATCCGAAGAATCCAGCATGTTCTGTAC
ABCC4-PCCAchr1395858786chr13100755137818IRRIQHVLYYATCCGAAGAATCCAGCATGTTCTGTACTAT
ABCC4-PCCAchr1395858786chr13100755137917RRIQHVLYCGAAGAATCCAGCATGTTCTGTAC
ABCC4-PCCAchr1395858786chr13100755137918RRIQHVLYYCGAAGAATCCAGCATGTTCTGTACTAT
ABCC4-PCCAchr1395858786chr13100755137919RRIQHVLYYSCGAAGAATCCAGCATGTTCTGTACTATTCA
ABCC4-PCCAchr1395858786chr13100755137920RRIQHVLYYSRCGAAGAATCCAGCATGTTCTGTACTATTCAAGA

check button mRNA and peptide sequences of FusionNeoAntigens that have potential interaction with HLA-IIs.
Fusion geneHchrHbpTchrTbpStart in +/-13AAEnd in +/-13AAFusionNeoAntigen peptideFusionNEoAntigen RNA sequence
ABCC4-PCCAchr1395858786chr13100755137015RVSEAIVSIRRIQHVAGGGTGTCAGAGGCAATCGTCAGCATCCGAAGAATCCAGCATGTT
ABCC4-PCCAchr1395858786chr13100755137116VSEAIVSIRRIQHVLGTGTCAGAGGCAATCGTCAGCATCCGAAGAATCCAGCATGTTCTG
ABCC4-PCCAchr1395858786chr13100755137217SEAIVSIRRIQHVLYTCAGAGGCAATCGTCAGCATCCGAAGAATCCAGCATGTTCTGTAC
ABCC4-PCCAchr1395858786chr13100755137419AIVSIRRIQHVLYYSGCAATCGTCAGCATCCGAAGAATCCAGCATGTTCTGTACTATTCA
ABCC4-PCCAchr1395858786chr13100755137520IVSIRRIQHVLYYSRATCGTCAGCATCCGAAGAATCCAGCATGTTCTGTACTATTCAAGA
ABCC4-PCCAchr1395858786chr13100755137621VSIRRIQHVLYYSRQGTCAGCATCCGAAGAATCCAGCATGTTCTGTACTATTCAAGACAG

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Information of the samples that have these potential fusion neoantigens of ABCC4-PCCA

check button These samples were reported as having these fusion breakpoints. For individual breakpoints, we checked the open reading frames considering multiple gene isoforms and chose the in-frame fusion genes only. Then, we made fusion protein sequences and predicted the fusion neoantigens. These fusion-positive samples may have these potential fusion neoantigens.
Cancer typeFusion geneHchrHbpHenstTchrTbpTenstSample
SARCABCC4-PCCAchr1395858786ENST00000376887chr13100755137ENST00000376279TCGA-DX-A1L0-01A

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Potential target of CAR-T therapy development for ABCC4-PCCA

check button Predicted 3D structure. We used RoseTTAFold.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, to provide the retention of the transmembrane domain, we only show the protein feature retention information of those transmembrane features


* Minus value of BPloci means that the break point is located before the CDS.
- In-frame and retained 'Transmembrane'.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneABCC4chr13:95858786chr13:100755137ENST00000376887-831136_1563871326.0TransmembraneHelical
HgeneABCC4chr13:95858786chr13:100755137ENST00000376887-831207_2273871326.0TransmembraneHelical
HgeneABCC4chr13:95858786chr13:100755137ENST00000376887-831228_2483871326.0TransmembraneHelical
HgeneABCC4chr13:95858786chr13:100755137ENST00000376887-831328_3483871326.0TransmembraneHelical
HgeneABCC4chr13:95858786chr13:100755137ENST00000376887-831351_3713871326.0TransmembraneHelical
HgeneABCC4chr13:95858786chr13:100755137ENST00000376887-83193_1133871326.0TransmembraneHelical
HgeneABCC4chr13:95858786chr13:100755137ENST00000412704-830136_1563871279.0TransmembraneHelical
HgeneABCC4chr13:95858786chr13:100755137ENST00000412704-830207_2273871279.0TransmembraneHelical
HgeneABCC4chr13:95858786chr13:100755137ENST00000412704-830228_2483871279.0TransmembraneHelical
HgeneABCC4chr13:95858786chr13:100755137ENST00000412704-830328_3483871279.0TransmembraneHelical
HgeneABCC4chr13:95858786chr13:100755137ENST00000412704-830351_3713871279.0TransmembraneHelical
HgeneABCC4chr13:95858786chr13:100755137ENST00000412704-83093_1133871279.0TransmembraneHelical
HgeneABCC4chr13:95858786chr13:100755137ENST00000431522-821136_156387860.0TransmembraneHelical
HgeneABCC4chr13:95858786chr13:100755137ENST00000431522-821207_227387860.0TransmembraneHelical
HgeneABCC4chr13:95858786chr13:100755137ENST00000431522-821228_248387860.0TransmembraneHelical
HgeneABCC4chr13:95858786chr13:100755137ENST00000431522-821328_348387860.0TransmembraneHelical
HgeneABCC4chr13:95858786chr13:100755137ENST00000431522-821351_371387860.0TransmembraneHelical
HgeneABCC4chr13:95858786chr13:100755137ENST00000431522-82193_113387860.0TransmembraneHelical

check button Subcellular localization prediction of the transmembrane domain retained fusion proteins
* We used DeepLoc 1.0. The order of the X-axis of the barplot is as follows: Entry_ID, Localization, Type, Nucleus, Cytoplasm, Extracellular, Mitochondrion, Cell_membrane, Endoplasmic_reticulum, Plastid, Golgi.apparatus, Lysosome.Vacuole, Peroxisome. Y-axis is the output score of DeepLoc. Clicking the image will open a new tab with a large image.
HgeneHchrHbpHenstTgeneTchrTbpTenstDeepLoc result

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Related Drugs to ABCC4-PCCA

check button Drugs used for this fusion-positive patient.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDrugSourcePMID

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Related Diseases to ABCC4-PCCA

check button Diseases that have this fusion gene.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDiseaseSourcePMID

check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource