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Center for Computational Systems Medicine level1
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Fusion Gene Summary

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Fusion Gene Sample Information

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Fusion ORF Analysis

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Fusion Amino Acid Sequences

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Fusion Protein Functional Features

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Fusion Protein-Protein Interaction

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Related drugs with this fusion protein

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Related disease with this fusion protein

Fusion Protein:EDA-FAAH2

Fusion Protein Summary

check button Fusion gene summary
Fusion partner gene informationFusion gene name: EDA-FAAH2
FusionPDB ID: 24924
FusionGDB2.0 ID: 24924
HgeneTgene
Gene symbol

EDA

FAAH2

Gene ID

1896

158584

Gene nameectodysplasin Afatty acid amide hydrolase 2
SynonymsECTD1|ED1|ED1-A1|ED1-A2|EDA-A1|EDA-A2|EDA1|EDA2|HED|HED1|ODT1|STHAGX1|TNLG7C|XHED|XLHEDAMDD
Cytomap

Xq13.1

Xp11.21

Type of geneprotein-codingprotein-coding
Descriptionectodysplasin-AX-linked anhidroitic ectodermal dysplasia proteinoligodontia 1tumor necrosis factor ligand 7Cfatty-acid amide hydrolase 2amidase domain containingamidase domain-containing proteinanandamide amidohydrolase 2oleamide hydrolase 2
Modification date2020031320200313
UniProtAcc

Q8WWZ3

Q6GMR7

Ensembl transtripts involved in fusion geneENST idsENST00000502251, ENST00000338901, 
ENST00000374552, ENST00000374553, 
ENST00000524573, ENST00000525810, 
ENST00000527388, 
ENST00000374900, 
ENST00000491179, 
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0)* DoF score8 X 7 X 3=1687 X 7 X 2=98
# samples 87
** MAII scorelog2(8/168*10)=-1.0703893278914
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(7/98*10)=-0.485426827170242
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context (manual curation of fusion genes in FusionPDB)

PubMed: EDA [Title/Abstract] AND FAAH2 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0)EDA(68836548)-FAAH2(57318931), # samples:2
Anticipated loss of major functional domain due to fusion event.EDA-FAAH2 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
EDA-FAAH2 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
EDA-FAAH2 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
EDA-FAAH2 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneEDA

GO:0051092

positive regulation of NF-kappaB transcription factor activity

11039935


check buttonFusion gene breakpoints across EDA (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across FAAH2 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


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Fusion Gene Sample Information

check buttonFusion gene information from FusionGDB2.0.
check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4LIHCTCGA-ED-A82E-01AEDAchrX

68836548

-FAAH2chrX

57318931

+
ChimerDB4LIHCTCGA-ED-A82E-01AEDAchrX

68836548

+FAAH2chrX

57318931

+


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Fusion ORF Analysis


check buttonFusion information from ORFfinder translation from full-length transcript sequence from FusionPDB.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000374553EDAchrX68836548+ENST00000374900FAAH2chrX57318931+23096382422044600
ENST00000374552EDAchrX68836548+ENST00000374900FAAH2chrX57318931+23096382422044600
ENST00000524573EDAchrX68836548+ENST00000374900FAAH2chrX57318931+22595881921994600
ENST00000525810EDAchrX68836548+ENST00000374900FAAH2chrX57318931+23096382422044600
ENST00000527388EDAchrX68836548+ENST00000374900FAAH2chrX57318931+23096382422044600
ENST00000338901EDAchrX68836548+ENST00000374900FAAH2chrX57318931+23096382422044600

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000374553ENST00000374900EDAchrX68836548+FAAH2chrX57318931+0.0011052320.99889475
ENST00000374552ENST00000374900EDAchrX68836548+FAAH2chrX57318931+0.0011052320.99889475
ENST00000524573ENST00000374900EDAchrX68836548+FAAH2chrX57318931+0.0010179170.998982
ENST00000525810ENST00000374900EDAchrX68836548+FAAH2chrX57318931+0.0011052320.99889475
ENST00000527388ENST00000374900EDAchrX68836548+FAAH2chrX57318931+0.0011052320.99889475
ENST00000338901ENST00000374900EDAchrX68836548+FAAH2chrX57318931+0.0011052320.99889475

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Fusion Amino Acid Sequences


check button For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>24924_24924_1_EDA-FAAH2_EDA_chrX_68836548_ENST00000338901_FAAH2_chrX_57318931_ENST00000374900_length(amino acids)=600AA_BP=131
MGYPEVERRELLPAAAPRERGSQGCGCGGAPARAGEGNSCLLFLGFFGLSLALHLLTLCCYLELRSELRRERGAESRLGGSGTPGTSGTL
SSLGGLDPDSPITSHLGQPSPKQQPLEPGEAALHSDSQDGHQVKCIDVVQAYINRIKDVNPMINGIVKYRFEEAMKEAHAVDQKLAEKQE
DEATLENKWPFLGVPLTVKEAFQLQGMPNSSGLMNRRDAIAKTDATVVALLKGAGAIPLGITNCSELCMWYESSNKIYGRSNNPYDLQHI
VGGSSGGEGCTLAAACSVIGVGSDIGGSIRMPAFFNGIFGHKPSPGVVPNKGQFPLAVGAQELFLCTGPMCRYAEDLAPMLKVMAGPGIK
RLKLDTKVHLKDLKFYWMEHDGGSFLMSKVDQDLIMTQKKVVVHLETILGASVQHVKLKKMKYSFQLWIAMMSAKGHDGKEPVKFVDLLG
DHGKHVSPLWELIKWCLGLSVYTIPSIGLALLEEKLRYSNEKYQKFKAVEESLRKELVDMLGDDGVFLYPSHPTVAPKHHVPLTRPFNFA

--------------------------------------------------------------

>24924_24924_2_EDA-FAAH2_EDA_chrX_68836548_ENST00000374552_FAAH2_chrX_57318931_ENST00000374900_length(amino acids)=600AA_BP=131
MGYPEVERRELLPAAAPRERGSQGCGCGGAPARAGEGNSCLLFLGFFGLSLALHLLTLCCYLELRSELRRERGAESRLGGSGTPGTSGTL
SSLGGLDPDSPITSHLGQPSPKQQPLEPGEAALHSDSQDGHQVKCIDVVQAYINRIKDVNPMINGIVKYRFEEAMKEAHAVDQKLAEKQE
DEATLENKWPFLGVPLTVKEAFQLQGMPNSSGLMNRRDAIAKTDATVVALLKGAGAIPLGITNCSELCMWYESSNKIYGRSNNPYDLQHI
VGGSSGGEGCTLAAACSVIGVGSDIGGSIRMPAFFNGIFGHKPSPGVVPNKGQFPLAVGAQELFLCTGPMCRYAEDLAPMLKVMAGPGIK
RLKLDTKVHLKDLKFYWMEHDGGSFLMSKVDQDLIMTQKKVVVHLETILGASVQHVKLKKMKYSFQLWIAMMSAKGHDGKEPVKFVDLLG
DHGKHVSPLWELIKWCLGLSVYTIPSIGLALLEEKLRYSNEKYQKFKAVEESLRKELVDMLGDDGVFLYPSHPTVAPKHHVPLTRPFNFA

--------------------------------------------------------------

>24924_24924_3_EDA-FAAH2_EDA_chrX_68836548_ENST00000374553_FAAH2_chrX_57318931_ENST00000374900_length(amino acids)=600AA_BP=131
MGYPEVERRELLPAAAPRERGSQGCGCGGAPARAGEGNSCLLFLGFFGLSLALHLLTLCCYLELRSELRRERGAESRLGGSGTPGTSGTL
SSLGGLDPDSPITSHLGQPSPKQQPLEPGEAALHSDSQDGHQVKCIDVVQAYINRIKDVNPMINGIVKYRFEEAMKEAHAVDQKLAEKQE
DEATLENKWPFLGVPLTVKEAFQLQGMPNSSGLMNRRDAIAKTDATVVALLKGAGAIPLGITNCSELCMWYESSNKIYGRSNNPYDLQHI
VGGSSGGEGCTLAAACSVIGVGSDIGGSIRMPAFFNGIFGHKPSPGVVPNKGQFPLAVGAQELFLCTGPMCRYAEDLAPMLKVMAGPGIK
RLKLDTKVHLKDLKFYWMEHDGGSFLMSKVDQDLIMTQKKVVVHLETILGASVQHVKLKKMKYSFQLWIAMMSAKGHDGKEPVKFVDLLG
DHGKHVSPLWELIKWCLGLSVYTIPSIGLALLEEKLRYSNEKYQKFKAVEESLRKELVDMLGDDGVFLYPSHPTVAPKHHVPLTRPFNFA

--------------------------------------------------------------

>24924_24924_4_EDA-FAAH2_EDA_chrX_68836548_ENST00000524573_FAAH2_chrX_57318931_ENST00000374900_length(amino acids)=600AA_BP=131
MGYPEVERRELLPAAAPRERGSQGCGCGGAPARAGEGNSCLLFLGFFGLSLALHLLTLCCYLELRSELRRERGAESRLGGSGTPGTSGTL
SSLGGLDPDSPITSHLGQPSPKQQPLEPGEAALHSDSQDGHQVKCIDVVQAYINRIKDVNPMINGIVKYRFEEAMKEAHAVDQKLAEKQE
DEATLENKWPFLGVPLTVKEAFQLQGMPNSSGLMNRRDAIAKTDATVVALLKGAGAIPLGITNCSELCMWYESSNKIYGRSNNPYDLQHI
VGGSSGGEGCTLAAACSVIGVGSDIGGSIRMPAFFNGIFGHKPSPGVVPNKGQFPLAVGAQELFLCTGPMCRYAEDLAPMLKVMAGPGIK
RLKLDTKVHLKDLKFYWMEHDGGSFLMSKVDQDLIMTQKKVVVHLETILGASVQHVKLKKMKYSFQLWIAMMSAKGHDGKEPVKFVDLLG
DHGKHVSPLWELIKWCLGLSVYTIPSIGLALLEEKLRYSNEKYQKFKAVEESLRKELVDMLGDDGVFLYPSHPTVAPKHHVPLTRPFNFA

--------------------------------------------------------------

>24924_24924_5_EDA-FAAH2_EDA_chrX_68836548_ENST00000525810_FAAH2_chrX_57318931_ENST00000374900_length(amino acids)=600AA_BP=131
MGYPEVERRELLPAAAPRERGSQGCGCGGAPARAGEGNSCLLFLGFFGLSLALHLLTLCCYLELRSELRRERGAESRLGGSGTPGTSGTL
SSLGGLDPDSPITSHLGQPSPKQQPLEPGEAALHSDSQDGHQVKCIDVVQAYINRIKDVNPMINGIVKYRFEEAMKEAHAVDQKLAEKQE
DEATLENKWPFLGVPLTVKEAFQLQGMPNSSGLMNRRDAIAKTDATVVALLKGAGAIPLGITNCSELCMWYESSNKIYGRSNNPYDLQHI
VGGSSGGEGCTLAAACSVIGVGSDIGGSIRMPAFFNGIFGHKPSPGVVPNKGQFPLAVGAQELFLCTGPMCRYAEDLAPMLKVMAGPGIK
RLKLDTKVHLKDLKFYWMEHDGGSFLMSKVDQDLIMTQKKVVVHLETILGASVQHVKLKKMKYSFQLWIAMMSAKGHDGKEPVKFVDLLG
DHGKHVSPLWELIKWCLGLSVYTIPSIGLALLEEKLRYSNEKYQKFKAVEESLRKELVDMLGDDGVFLYPSHPTVAPKHHVPLTRPFNFA

--------------------------------------------------------------

>24924_24924_6_EDA-FAAH2_EDA_chrX_68836548_ENST00000527388_FAAH2_chrX_57318931_ENST00000374900_length(amino acids)=600AA_BP=131
MGYPEVERRELLPAAAPRERGSQGCGCGGAPARAGEGNSCLLFLGFFGLSLALHLLTLCCYLELRSELRRERGAESRLGGSGTPGTSGTL
SSLGGLDPDSPITSHLGQPSPKQQPLEPGEAALHSDSQDGHQVKCIDVVQAYINRIKDVNPMINGIVKYRFEEAMKEAHAVDQKLAEKQE
DEATLENKWPFLGVPLTVKEAFQLQGMPNSSGLMNRRDAIAKTDATVVALLKGAGAIPLGITNCSELCMWYESSNKIYGRSNNPYDLQHI
VGGSSGGEGCTLAAACSVIGVGSDIGGSIRMPAFFNGIFGHKPSPGVVPNKGQFPLAVGAQELFLCTGPMCRYAEDLAPMLKVMAGPGIK
RLKLDTKVHLKDLKFYWMEHDGGSFLMSKVDQDLIMTQKKVVVHLETILGASVQHVKLKKMKYSFQLWIAMMSAKGHDGKEPVKFVDLLG
DHGKHVSPLWELIKWCLGLSVYTIPSIGLALLEEKLRYSNEKYQKFKAVEESLRKELVDMLGDDGVFLYPSHPTVAPKHHVPLTRPFNFA

--------------------------------------------------------------

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Fusion Protein Functional Features


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chrX:68836548/chrX:57318931)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
EDA

Q8WWZ3

FAAH2

Q6GMR7

FUNCTION: Adapter protein that interacts with EDAR DEATH domain and couples the receptor to EDA signaling pathway during morphogenesis of ectodermal organs. Mediates the activation of NF-kappa-B. {ECO:0000269|PubMed:11882293}.FUNCTION: Catalyzes the hydrolysis of endogenous amidated lipids like the sleep-inducing lipid oleamide ((9Z)-octadecenamide), the endocannabinoid anandamide (N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-ethanolamine), as well as other fatty amides, to their corresponding fatty acids, thereby regulating the signaling functions of these molecules (PubMed:17015445, PubMed:19926788). Hydrolyzes monounsaturated substrate anandamide preferentially as compared to polyunsaturated substrates. {ECO:0000269|PubMed:17015445, ECO:0000269|PubMed:19926788}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

* Minus value of BPloci means that the break pointn is located before the CDS.
- Retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneEDAchrX:68836548chrX:57318931ENST00000527388+13180_229132.04.666666666666667DomainNote=Collagen-like
HgeneEDAchrX:68836548chrX:57318931ENST00000338901+121_41132.0149.0Topological domainCytoplasmic
HgeneEDAchrX:68836548chrX:57318931ENST00000374552+181_41132.0392.0Topological domainCytoplasmic
HgeneEDAchrX:68836548chrX:57318931ENST00000374553+181_41132.0390.0Topological domainCytoplasmic
HgeneEDAchrX:68836548chrX:57318931ENST00000524573+181_41132.0387.0Topological domainCytoplasmic
HgeneEDAchrX:68836548chrX:57318931ENST00000525810+121_41132.0136.0Topological domainCytoplasmic
HgeneEDAchrX:68836548chrX:57318931ENST00000527388+131_41132.04.666666666666667Topological domainCytoplasmic
HgeneEDAchrX:68836548chrX:57318931ENST00000527388+1363_391132.04.666666666666667Topological domainExtracellular
HgeneEDAchrX:68836548chrX:57318931ENST00000338901+1242_62132.0149.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
HgeneEDAchrX:68836548chrX:57318931ENST00000374552+1842_62132.0392.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
HgeneEDAchrX:68836548chrX:57318931ENST00000374553+1842_62132.0390.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
HgeneEDAchrX:68836548chrX:57318931ENST00000524573+1842_62132.0387.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
HgeneEDAchrX:68836548chrX:57318931ENST00000525810+1242_62132.0136.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
HgeneEDAchrX:68836548chrX:57318931ENST00000527388+1342_62132.04.666666666666667TransmembraneHelical%3B Signal-anchor for type II membrane protein

- Not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneEDAchrX:68836548chrX:57318931ENST00000338901+12180_229132.0149.0DomainNote=Collagen-like
HgeneEDAchrX:68836548chrX:57318931ENST00000374552+18180_229132.0392.0DomainNote=Collagen-like
HgeneEDAchrX:68836548chrX:57318931ENST00000374553+18180_229132.0390.0DomainNote=Collagen-like
HgeneEDAchrX:68836548chrX:57318931ENST00000524573+18180_229132.0387.0DomainNote=Collagen-like
HgeneEDAchrX:68836548chrX:57318931ENST00000525810+12180_229132.0136.0DomainNote=Collagen-like
HgeneEDAchrX:68836548chrX:57318931ENST00000338901+1263_391132.0149.0Topological domainExtracellular
HgeneEDAchrX:68836548chrX:57318931ENST00000374552+1863_391132.0392.0Topological domainExtracellular
HgeneEDAchrX:68836548chrX:57318931ENST00000374553+1863_391132.0390.0Topological domainExtracellular
HgeneEDAchrX:68836548chrX:57318931ENST00000524573+1863_391132.0387.0Topological domainExtracellular
HgeneEDAchrX:68836548chrX:57318931ENST00000525810+1263_391132.0136.0Topological domainExtracellular
TgeneFAAH2chrX:68836548chrX:57318931ENST0000037490001148_5164.0533.0Compositional biasNote=Poly-Leu
TgeneFAAH2chrX:68836548chrX:57318931ENST0000037490001111_3164.0533.0TransmembraneHelical


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Fusion Protein-Protein Interaction


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type from validated records (BIOGRID-3.4.160)
GenePPI interactors


check button Protein-protein interactors based on sequence similarity (STRING)
GeneSTRING network
EDA
FAAH2


check button - Retained interactions in fusion protein (protein functional feature from UniProt).
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost interactions due to fusion (protein functional feature from UniProt).
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs to EDA-FAAH2


check button Drugs used for this fusion-positive patient.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDrugSourcePMID

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Related Diseases to EDA-FAAH2


check button Diseases that have this fusion gene.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDiseaseSourcePMID

check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource