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Center for Computational Systems Medicine level1
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Fusion Gene Summary

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Fusion Gene Sample Information

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Fusion ORF Analysis

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Fusion Amino Acid Sequences

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Fusion Protein Functional Features

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Fusion Protein-Protein Interaction

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Related drugs with this fusion protein

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Related disease with this fusion protein

Fusion Protein:FBXO32-ANXA13

Fusion Protein Summary

check button Fusion gene summary
Fusion partner gene informationFusion gene name: FBXO32-ANXA13
FusionPDB ID: 29797
FusionGDB2.0 ID: 29797
HgeneTgene
Gene symbol

FBXO32

ANXA13

Gene ID

114907

312

Gene nameF-box protein 32annexin A13
SynonymsFbx32|MAFbxANX13|ISA
Cytomap

8q24.13

8q24.13

Type of geneprotein-codingprotein-coding
DescriptionF-box only protein 32atrogin 1muscle atrophy F-box proteinannexin A13annexin XIIIannexin, intestine-specificannexin-13intestine-specific annexin
Modification date2020031320200313
UniProtAcc

Q969P5

P27216

Ensembl transtripts involved in fusion geneENST idsENST00000443022, ENST00000517956, 
ENST00000519045, ENST00000262219, 
ENST00000419625, 
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0)* DoF score7 X 8 X 3=1686 X 4 X 6=144
# samples 911
** MAII scorelog2(9/168*10)=-0.900464326449086
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(11/144*10)=-0.388565287917653
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context (manual curation of fusion genes in FusionPDB)

PubMed: FBXO32 [Title/Abstract] AND ANXA13 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0)FBXO32(124518632)-ANXA13(124724993), # samples:2
FBXO32(124544138)-ANXA13(124693599), # samples:2
Anticipated loss of major functional domain due to fusion event.FBXO32-ANXA13 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
FBXO32-ANXA13 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
FBXO32-ANXA13 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
FBXO32-ANXA13 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
FBXO32-ANXA13 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF.
FBXO32-ANXA13 seems lost the major protein functional domain in Hgene partner, which is a tumor suppressor due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneFBXO32

GO:0016567

protein ubiquitination

26753747


check buttonFusion gene breakpoints across FBXO32 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across ANXA13 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


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Fusion Gene Sample Information

check buttonFusion gene information from FusionGDB2.0.
check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4BRCATCGA-A2-A25F-01AFBXO32chr8

124518632

-ANXA13chr8

124724993

-
ChimerDB4BRCATCGA-OL-A66I-01AFBXO32chr8

124544138

-ANXA13chr8

124693599

-
ChimerDB4LUSCTCGA-22-4605-01AFBXO32chr8

124553139

-ANXA13chr8

124714976

-


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Fusion ORF Analysis


check buttonFusion information from ORFfinder translation from full-length transcript sequence from FusionPDB.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000517956FBXO32chr8124518632-ENST00000262219ANXA13chr8124724993-240810261921961589
ENST00000517956FBXO32chr8124518632-ENST00000419625ANXA13chr8124724993-240710261921961589
ENST00000443022FBXO32chr8124518632-ENST00000262219ANXA13chr8124724993-21297471921682496
ENST00000443022FBXO32chr8124518632-ENST00000419625ANXA13chr8124724993-21287471921682496
ENST00000517956FBXO32chr8124544138-ENST00000262219ANXA13chr8124693599-1130564192683163
ENST00000443022FBXO32chr8124544138-ENST00000262219ANXA13chr8124693599-1130564192683163

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000517956ENST00000262219FBXO32chr8124518632-ANXA13chr8124724993-0.0083521280.99164784
ENST00000517956ENST00000419625FBXO32chr8124518632-ANXA13chr8124724993-0.0083457640.99165416
ENST00000443022ENST00000262219FBXO32chr8124518632-ANXA13chr8124724993-0.0051401520.9948598
ENST00000443022ENST00000419625FBXO32chr8124518632-ANXA13chr8124724993-0.0051345570.9948655
ENST00000517956ENST00000262219FBXO32chr8124544138-ANXA13chr8124693599-0.0019307880.9980692
ENST00000443022ENST00000262219FBXO32chr8124544138-ANXA13chr8124693599-0.0019307880.9980692

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Fusion Amino Acid Sequences


check button For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>29797_29797_1_FBXO32-ANXA13_FBXO32_chr8_124518632_ENST00000443022_ANXA13_chr8_124724993_ENST00000262219_length(amino acids)=496AA_BP=184
MPFLGQDWRSPGQNWVKTADGWKRFLDEKSGSFVSDLSSYCNKEVYNKENLFNSLNYDVAAKKRKKDMLNSKTKTQYFHQEKWIYVHKGS
TKERHGYCTLGEAFNRLDFSTAILDSRRFNYVVRPAFKGLTFTDLPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLLWKKLCQYH
FSERQAKASSPQGFDVDRDAKKLNKACKGMGTNEAAIIEILSGRTSDERQQIKQKYKATYGKELEEVLKSELSGNFEKTALALLDRPSEY
AARQLQKAMKGLGTDESVLIEVLCTRTNKEIIAIKEAYQRLFDRSLESDVKGDTSGNLKKILVSLLQANRNEGDDVDKDLAGQDAKDLYD
AGEGRWGTDELAFNEVLAKRSYKQLRATFQAYQILIGKDIEEAIEEETSGDLQKAYLTLVRCAQDCEDYFAERLYKSMKGAGTDEETLIR

--------------------------------------------------------------

>29797_29797_2_FBXO32-ANXA13_FBXO32_chr8_124518632_ENST00000443022_ANXA13_chr8_124724993_ENST00000419625_length(amino acids)=496AA_BP=184
MPFLGQDWRSPGQNWVKTADGWKRFLDEKSGSFVSDLSSYCNKEVYNKENLFNSLNYDVAAKKRKKDMLNSKTKTQYFHQEKWIYVHKGS
TKERHGYCTLGEAFNRLDFSTAILDSRRFNYVVRPAFKGLTFTDLPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLLWKKLCQYH
FSERQAKASSPQGFDVDRDAKKLNKACKGMGTNEAAIIEILSGRTSDERQQIKQKYKATYGKELEEVLKSELSGNFEKTALALLDRPSEY
AARQLQKAMKGLGTDESVLIEVLCTRTNKEIIAIKEAYQRLFDRSLESDVKGDTSGNLKKILVSLLQANRNEGDDVDKDLAGQDAKDLYD
AGEGRWGTDELAFNEVLAKRSYKQLRATFQAYQILIGKDIEEAIEEETSGDLQKAYLTLVRCAQDCEDYFAERLYKSMKGAGTDEETLIR

--------------------------------------------------------------

>29797_29797_3_FBXO32-ANXA13_FBXO32_chr8_124518632_ENST00000517956_ANXA13_chr8_124724993_ENST00000262219_length(amino acids)=589AA_BP=277
MPFLGQDWRSPGQNWVKTADGWKRFLDEKSGSFVSDLSSYCNKEVYNKENLFNSLNYDVAAKKRKKDMLNSKTKTQYFHQEKWIYVHKGS
TKERHGYCTLGEAFNRLDFSTAILDSRRFNYVVRLLELIAKSQLTSLSGIAQKNFMNILEKVVLKVLEDQQNIRLIRELLQTLYTSLCTL
VQRVGKSVLVGNINMWVYRMETILHWQQQLNNIQITRPAFKGLTFTDLPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLLWKKLC
QYHFSERQAKASSPQGFDVDRDAKKLNKACKGMGTNEAAIIEILSGRTSDERQQIKQKYKATYGKELEEVLKSELSGNFEKTALALLDRP
SEYAARQLQKAMKGLGTDESVLIEVLCTRTNKEIIAIKEAYQRLFDRSLESDVKGDTSGNLKKILVSLLQANRNEGDDVDKDLAGQDAKD
LYDAGEGRWGTDELAFNEVLAKRSYKQLRATFQAYQILIGKDIEEAIEEETSGDLQKAYLTLVRCAQDCEDYFAERLYKSMKGAGTDEET

--------------------------------------------------------------

>29797_29797_4_FBXO32-ANXA13_FBXO32_chr8_124518632_ENST00000517956_ANXA13_chr8_124724993_ENST00000419625_length(amino acids)=589AA_BP=277
MPFLGQDWRSPGQNWVKTADGWKRFLDEKSGSFVSDLSSYCNKEVYNKENLFNSLNYDVAAKKRKKDMLNSKTKTQYFHQEKWIYVHKGS
TKERHGYCTLGEAFNRLDFSTAILDSRRFNYVVRLLELIAKSQLTSLSGIAQKNFMNILEKVVLKVLEDQQNIRLIRELLQTLYTSLCTL
VQRVGKSVLVGNINMWVYRMETILHWQQQLNNIQITRPAFKGLTFTDLPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLLWKKLC
QYHFSERQAKASSPQGFDVDRDAKKLNKACKGMGTNEAAIIEILSGRTSDERQQIKQKYKATYGKELEEVLKSELSGNFEKTALALLDRP
SEYAARQLQKAMKGLGTDESVLIEVLCTRTNKEIIAIKEAYQRLFDRSLESDVKGDTSGNLKKILVSLLQANRNEGDDVDKDLAGQDAKD
LYDAGEGRWGTDELAFNEVLAKRSYKQLRATFQAYQILIGKDIEEAIEEETSGDLQKAYLTLVRCAQDCEDYFAERLYKSMKGAGTDEET

--------------------------------------------------------------

>29797_29797_5_FBXO32-ANXA13_FBXO32_chr8_124544138_ENST00000443022_ANXA13_chr8_124693599_ENST00000262219_length(amino acids)=163AA_BP=124
MPFLGQDWRSPGQNWVKTADGWKRFLDEKSGSFVSDLSSYCNKEVYNKENLFNSLNYDVAAKKRKKDMLNSKTKTQYFHQEKWIYVHKGS

--------------------------------------------------------------

>29797_29797_6_FBXO32-ANXA13_FBXO32_chr8_124544138_ENST00000517956_ANXA13_chr8_124693599_ENST00000262219_length(amino acids)=163AA_BP=124
MPFLGQDWRSPGQNWVKTADGWKRFLDEKSGSFVSDLSSYCNKEVYNKENLFNSLNYDVAAKKRKKDMLNSKTKTQYFHQEKWIYVHKGS

--------------------------------------------------------------

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Fusion Protein Functional Features


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr8:124518632/chr8:124724993)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
FBXO32

Q969P5

ANXA13

P27216

FUNCTION: Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Probably recognizes and binds to phosphorylated target proteins during skeletal muscle atrophy. Recognizes TERF1. {ECO:0000269|PubMed:15531760}.FUNCTION: [Isoform A]: Binds to membranes enriched in phosphatidylserine or phosphatidylglycerol in a calcium-dependent manner (PubMed:27676605, PubMed:30610115). Half-maximal membrane binding requires about 60 uM calcium. Does not bind to membranes that lack phospholipids with an acidic headgroup (PubMed:27676605). {ECO:0000269|PubMed:27676605, ECO:0000269|PubMed:30610115}.; FUNCTION: [Isoform B]: Binds to membranes enriched in phosphatidylserine or phosphatidylglycerol in a calcium-dependent manner, but requires higher calcium levels for membrane binding than isoform A. Half-maximal membrane binding requires about 320 uM calcium. {ECO:0000269|PubMed:27676605}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

* Minus value of BPloci means that the break pointn is located before the CDS.
- Retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneFBXO32chr8:124518632chr8:124724993ENST00000517956-79223_271278.0356.0DomainNote=F-box
HgeneFBXO32chr8:124518632chr8:124724993ENST00000443022-57169_173185.0263.0MotifNote=Nuclear export signal
HgeneFBXO32chr8:124518632chr8:124724993ENST00000443022-5762_67185.0263.0MotifNuclear localization signal
HgeneFBXO32chr8:124518632chr8:124724993ENST00000517956-79169_173278.0356.0MotifNote=Nuclear export signal
HgeneFBXO32chr8:124518632chr8:124724993ENST00000517956-7962_67278.0356.0MotifNuclear localization signal
HgeneFBXO32chr8:124544138chr8:124693599ENST00000443022-4762_67124.0263.0MotifNuclear localization signal
HgeneFBXO32chr8:124544138chr8:124693599ENST00000517956-4962_67124.0356.0MotifNuclear localization signal
TgeneANXA13chr8:124518632chr8:124724993ENST00000262219112169_24146.0358.0RepeatAnnexin 3
TgeneANXA13chr8:124518632chr8:124724993ENST00000262219112245_31646.0358.0RepeatAnnexin 4
TgeneANXA13chr8:124518632chr8:124724993ENST0000026221911286_15746.0358.0RepeatAnnexin 2
TgeneANXA13chr8:124518632chr8:124724993ENST0000041962501114_855.0317.0RepeatAnnexin 1
TgeneANXA13chr8:124518632chr8:124724993ENST00000419625011169_2415.0317.0RepeatAnnexin 3
TgeneANXA13chr8:124518632chr8:124724993ENST00000419625011245_3165.0317.0RepeatAnnexin 4
TgeneANXA13chr8:124518632chr8:124724993ENST0000041962501186_1575.0317.0RepeatAnnexin 2

- Not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneFBXO32chr8:124518632chr8:124724993ENST00000443022-57223_271185.0263.0DomainNote=F-box
HgeneFBXO32chr8:124544138chr8:124693599ENST00000443022-47223_271124.0263.0DomainNote=F-box
HgeneFBXO32chr8:124544138chr8:124693599ENST00000517956-49223_271124.0356.0DomainNote=F-box
HgeneFBXO32chr8:124518632chr8:124724993ENST00000443022-57280_295185.0263.0MotifNote=Bipartite nuclear localization signal
HgeneFBXO32chr8:124518632chr8:124724993ENST00000517956-79280_295278.0356.0MotifNote=Bipartite nuclear localization signal
HgeneFBXO32chr8:124544138chr8:124693599ENST00000443022-47169_173124.0263.0MotifNote=Nuclear export signal
HgeneFBXO32chr8:124544138chr8:124693599ENST00000443022-47280_295124.0263.0MotifNote=Bipartite nuclear localization signal
HgeneFBXO32chr8:124544138chr8:124693599ENST00000517956-49169_173124.0356.0MotifNote=Nuclear export signal
HgeneFBXO32chr8:124544138chr8:124693599ENST00000517956-49280_295124.0356.0MotifNote=Bipartite nuclear localization signal
TgeneANXA13chr8:124518632chr8:124724993ENST0000026221911214_8546.0358.0RepeatAnnexin 1
TgeneANXA13chr8:124544138chr8:124693599ENST00000262219101214_85318.0358.0RepeatAnnexin 1
TgeneANXA13chr8:124544138chr8:124693599ENST000002622191012169_241318.0358.0RepeatAnnexin 3
TgeneANXA13chr8:124544138chr8:124693599ENST000002622191012245_316318.0358.0RepeatAnnexin 4
TgeneANXA13chr8:124544138chr8:124693599ENST00000262219101286_157318.0358.0RepeatAnnexin 2
TgeneANXA13chr8:124544138chr8:124693599ENST0000041962591114_85277.0317.0RepeatAnnexin 1
TgeneANXA13chr8:124544138chr8:124693599ENST00000419625911169_241277.0317.0RepeatAnnexin 3
TgeneANXA13chr8:124544138chr8:124693599ENST00000419625911245_316277.0317.0RepeatAnnexin 4
TgeneANXA13chr8:124544138chr8:124693599ENST0000041962591186_157277.0317.0RepeatAnnexin 2


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Fusion Protein-Protein Interaction


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type from validated records (BIOGRID-3.4.160)
GenePPI interactors


check button Protein-protein interactors based on sequence similarity (STRING)
GeneSTRING network
FBXO32
ANXA13


check button - Retained interactions in fusion protein (protein functional feature from UniProt).
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost interactions due to fusion (protein functional feature from UniProt).
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs to FBXO32-ANXA13


check button Drugs used for this fusion-positive patient.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDrugSourcePMID

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Related Diseases to FBXO32-ANXA13


check button Diseases that have this fusion gene.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDiseaseSourcePMID

check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource