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Fusion Protein:ITGA3-CASC3 |
Fusion Protein Summary |
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Fusion partner gene information | Fusion gene name: ITGA3-CASC3 | FusionPDB ID: 40418 | FusionGDB2.0 ID: 40418 | Hgene | Tgene | Gene symbol | ITGA3 | CASC3 | Gene ID | 3675 | 22794 |
Gene name | integrin subunit alpha 3 | CASC3 exon junction complex subunit | |
Synonyms | CD49C|FRP-2|GAP-B3|GAPB3|ILNEB|MSK18|VCA-2|VL3A|VLA3a | BTZ|MLN51 | |
Cytomap | 17q21.33 | 17q21.1 | |
Type of gene | protein-coding | protein-coding | |
Description | integrin alpha-3CD49 antigen-like family member Calpha 3 subunit of VLA-3 receptorantigen CD49Cantigen identified by monoclonal antibody J143galactoprotein B3integrin alpha 3integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)testi | protein CASC3MLN 51barentszcancer susceptibility 3cancer susceptibility candidate 3cancer susceptibility candidate gene 3 proteinmetastatic lymph node 51metastatic lymph node gene 51 proteinprotein barentsz | |
Modification date | 20200320 | 20200313 | |
UniProtAcc | P26006 | O15234 | |
Ensembl transtripts involved in fusion gene | ENST ids | ENST00000007722, ENST00000320031, ENST00000544892, | ENST00000264645, |
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0) | * DoF score | 9 X 10 X 7=630 | 10 X 5 X 5=250 |
# samples | 9 | 10 | |
** MAII score | log2(9/630*10)=-2.8073549220576 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(10/250*10)=-1.32192809488736 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context (manual curation of fusion genes in FusionPDB) | PubMed: ITGA3 [Title/Abstract] AND CASC3 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0) | ITGA3(48158772)-CASC3(38318006), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | ITGA3-CASC3 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. ITGA3-CASC3 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. ITGA3-CASC3 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. ITGA3-CASC3 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | ITGA3 | GO:1903078 | positive regulation of protein localization to plasma membrane | 10455171 |
Tgene | CASC3 | GO:0000398 | mRNA splicing, via spliceosome | 29301961 |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Fusion Gene Sample Information |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BLCA | TCGA-XF-A8HH-01A | ITGA3 | chr17 | 48158772 | + | CASC3 | chr17 | 38318006 | + |
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Fusion ORF Analysis |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000320031 | ITGA3 | chr17 | 48158772 | + | ENST00000264645 | CASC3 | chr17 | 38318006 | + | 6842 | 3249 | 174 | 5063 | 1629 |
ENST00000007722 | ITGA3 | chr17 | 48158772 | + | ENST00000264645 | CASC3 | chr17 | 38318006 | + | 6512 | 2919 | 0 | 4733 | 1577 |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000320031 | ENST00000264645 | ITGA3 | chr17 | 48158772 | + | CASC3 | chr17 | 38318006 | + | 0.000997052 | 0.999003 |
ENST00000007722 | ENST00000264645 | ITGA3 | chr17 | 48158772 | + | CASC3 | chr17 | 38318006 | + | 0.000675638 | 0.99932444 |
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Fusion Amino Acid Sequences |
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>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP >40418_40418_1_ITGA3-CASC3_ITGA3_chr17_48158772_ENST00000007722_CASC3_chr17_38318006_ENST00000264645_length(amino acids)=1577AA_BP=973 MGPGPSRAPRAPRLMLCALALMVAAGGCVVSAFNLDTRFLVVKEAGNPGSLFGYSVALHRQTERQQRYLLLAGAPRELAVPDGYTNRTGA VYLCPLTAHKDDCERMNITVKNDPGHHIIEDMWLGVTVASQGPAGRVLVCAHRYTQVLWSGSEDQRRMVGKCYVRGNDLELDSSDDWQTY HNEMCNSNTDYLETGMCQLGTSGGFTQNTVYFGAPGAYNWKGNSYMIQRKEWDLSEYSYKDPEDQGNLYIGYTMQVGSFILHPKNITIVT GAPRHRHMGAVFLLSQEAGGDLRRRQVLEGSQVGAYFGSAIALADLNNDGWQDLLVGAPYYFERKEEVGGAIYVFMNQAGTSFPAHPSLL LHGPSGSAFGLSVASIGDINQDGFQDIAVGAPFEGLGKVYIYHSSSKGLLRQPQQVIHGEKLGLPGLATFGYSLSGQMDVDENFYPDLLV GSLSDHIVLLRARPVINIVHKTLVPRPAVLDPALCTATSCVQVELCFAYNQSAGNPNYRRNITLAYTLEADRDRRPPRLRFAGSESAVFH GFFSMPEMRCQKLELLLMDNLRDKLRPIIISMNYSLPLRMPDRPRLGLRSLDAYPILNQAQALENHTEVQFQKECGPDNKCESNLQMRAA FVSEQQQKLSRLQYSRDVRKLLLSINVTNTRTSERSGEDAHEALLTLVVPPALLLSSVRPPGACQANETIFCELGNPFKRNQRMELLIAF EVIGVTLHTRDLQVQLQLSTSSHQDNLWPMILTLLVDYTLQTSLSMVNHRLQSFFGGTVMGESGMKTVEDVGSPLKYEFQVGPMGEGLVG LGTLVLGLEWPYEVSNGKWLLYPTEITVHGNGSWPCRPPGDLINPLNLTLSDPGDRPSSPQRRRRQLDPGGGQGPPPVTLAAAKKAKSET VLTCATGRAHCVWLECPIPDAPVVTNVTVKARVWNSTFIEDYRDFDRVRVNGWATLFLRTSIPTINMENKTTWGEEGEYSEEENSKVELK SEANDAVNSSTKEEKGEEKPDTKSTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKG RQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDIRSAHNPDDIKPRRIRKPRYGSPPQRDPNWNGERLNKSHRHQGLGGTLPPRTF INRNAAGTGRMSAPRNYSRSGGFKEGRAGFRPVEAGGQHGGRSGETVKHEISYRSRRLEQTSVRDPSPEADAPVLGSPEKEEAASEPPAA APDAAPPPPDRPIEKKSYSRARRTRTKVGDAVKLAEEVPPPPEGLIPAPPVPETTPTPPTKTGTWEAPVDSSTSGLEQDVAQLNIAEQNW SPGQPSFLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHISIMEGHYYDPLQFQGPIYTHGDSPAP LPPQGMLVQPGMNLPHPGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQA -------------------------------------------------------------- >40418_40418_2_ITGA3-CASC3_ITGA3_chr17_48158772_ENST00000320031_CASC3_chr17_38318006_ENST00000264645_length(amino acids)=1629AA_BP=1025 MGLGARNRSALRSAAAGGFQCPPAARGAGEQVLTPSSAPSRALAGTPLPLAAMGPGPSRAPRAPRLMLCALALMVAAGGCVVSAFNLDTR FLVVKEAGNPGSLFGYSVALHRQTERQQRYLLLAGAPRELAVPDGYTNRTGAVYLCPLTAHKDDCERMNITVKNDPGHHIIEDMWLGVTV ASQGPAGRVLVCAHRYTQVLWSGSEDQRRMVGKCYVRGNDLELDSSDDWQTYHNEMCNSNTDYLETGMCQLGTSGGFTQNTVYFGAPGAY NWKGNSYMIQRKEWDLSEYSYKDPEDQGNLYIGYTMQVGSFILHPKNITIVTGAPRHRHMGAVFLLSQEAGGDLRRRQVLEGSQVGAYFG SAIALADLNNDGWQDLLVGAPYYFERKEEVGGAIYVFMNQAGTSFPAHPSLLLHGPSGSAFGLSVASIGDINQDGFQDIAVGAPFEGLGK VYIYHSSSKGLLRQPQQVIHGEKLGLPGLATFGYSLSGQMDVDENFYPDLLVGSLSDHIVLLRARPVINIVHKTLVPRPAVLDPALCTAT SCVQVELCFAYNQSAGNPNYRRNITLAYTLEADRDRRPPRLRFAGSESAVFHGFFSMPEMRCQKLELLLMDNLRDKLRPIIISMNYSLPL RMPDRPRLGLRSLDAYPILNQAQALENHTEVQFQKECGPDNKCESNLQMRAAFVSEQQQKLSRLQYSRDVRKLLLSINVTNTRTSERSGE DAHEALLTLVVPPALLLSSVRPPGACQANETIFCELGNPFKRNQRMELLIAFEVIGVTLHTRDLQVQLQLSTSSHQDNLWPMILTLLVDY TLQTSLSMVNHRLQSFFGGTVMGESGMKTVEDVGSPLKYEFQVGPMGEGLVGLGTLVLGLEWPYEVSNGKWLLYPTEITVHGNGSWPCRP PGDLINPLNLTLSDPGDRPSSPQRRRRQLDPGGGQGPPPVTLAAAKKAKSETVLTCATGRAHCVWLECPIPDAPVVTNVTVKARVWNSTF IEDYRDFDRVRVNGWATLFLRTSIPTINMENKTTWGEEGEYSEEENSKVELKSEANDAVNSSTKEEKGEEKPDTKSTVTGERQSGDGQES TEPVENKVGKKGPKHLDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDI RSAHNPDDIKPRRIRKPRYGSPPQRDPNWNGERLNKSHRHQGLGGTLPPRTFINRNAAGTGRMSAPRNYSRSGGFKEGRAGFRPVEAGGQ HGGRSGETVKHEISYRSRRLEQTSVRDPSPEADAPVLGSPEKEEAASEPPAAAPDAAPPPPDRPIEKKSYSRARRTRTKVGDAVKLAEEV PPPPEGLIPAPPVPETTPTPPTKTGTWEAPVDSSTSGLEQDVAQLNIAEQNWSPGQPSFLQPRELRGMPNHIHMGAGPPPQFNRMEEMGV QGGRAKRYSSQRQRPVPEPPAPPVHISIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMLVQPGMNLPHPGLHPHQTPAPLPNPGLYPPPV SMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQVYGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPP -------------------------------------------------------------- |
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Fusion Protein Functional Features |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr17:48158772/chr17:38318006) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
ITGA3 | CASC3 |
FUNCTION: Integrin alpha-3/beta-1 is a receptor for fibronectin, laminin, collagen, epiligrin, thrombospondin and CSPG4. Integrin alpha-3/beta-1 provides a docking site for FAP (seprase) at invadopodia plasma membranes in a collagen-dependent manner and hence may participate in the adhesion, formation of invadopodia and matrix degradation processes, promoting cell invasion. Alpha-3/beta-1 may mediate with LGALS3 the stimulation by CSPG4 of endothelial cells migration. {ECO:0000269|PubMed:10455171, ECO:0000269|PubMed:15181153}. | FUNCTION: Required for pre-mRNA splicing as component of the spliceosome (PubMed:28502770, PubMed:29301961). Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby influencing downstream processes including nuclear mRNA export, subcellular mRNA localization, translation efficiency and nonsense-mediated mRNA decay (NMD). Stimulates the ATPase and RNA-helicase activities of EIF4A3. Plays a role in the stress response by participating in cytoplasmic stress granules assembly and by favoring cell recovery following stress. Component of the dendritic ribonucleoprotein particles (RNPs) in hippocampal neurons. May play a role in mRNA transport. Binds spliced mRNA in sequence-independent manner, 20-24 nucleotides upstream of mRNA exon-exon junctions. Binds poly(G) and poly(U) RNA homopolymer. {ECO:0000269|PubMed:17375189, ECO:0000269|PubMed:17652158, ECO:0000269|PubMed:28502770, ECO:0000269|PubMed:29301961}. |
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- Retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000007722 | + | 23 | 25 | 315_323 | 973.0 | 1067.0 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000007722 | + | 23 | 25 | 378_386 | 973.0 | 1067.0 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000007722 | + | 23 | 25 | 439_447 | 973.0 | 1067.0 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000320031 | + | 23 | 26 | 315_323 | 973.0 | 1330.3333333333333 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000320031 | + | 23 | 26 | 378_386 | 973.0 | 1330.3333333333333 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000320031 | + | 23 | 26 | 439_447 | 973.0 | 1330.3333333333333 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000007722 | + | 23 | 25 | 110_171 | 973.0 | 1067.0 | Repeat | FG-GAP 2 |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000007722 | + | 23 | 25 | 185_235 | 973.0 | 1067.0 | Repeat | FG-GAP 3 |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000007722 | + | 23 | 25 | 236_292 | 973.0 | 1067.0 | Repeat | FG-GAP 4 |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000007722 | + | 23 | 25 | 293_354 | 973.0 | 1067.0 | Repeat | FG-GAP 5 |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000007722 | + | 23 | 25 | 356_411 | 973.0 | 1067.0 | Repeat | FG-GAP 6 |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000007722 | + | 23 | 25 | 38_103 | 973.0 | 1067.0 | Repeat | FG-GAP 1 |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000007722 | + | 23 | 25 | 415_477 | 973.0 | 1067.0 | Repeat | FG-GAP 7 |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000320031 | + | 23 | 26 | 110_171 | 973.0 | 1330.3333333333333 | Repeat | FG-GAP 2 |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000320031 | + | 23 | 26 | 185_235 | 973.0 | 1330.3333333333333 | Repeat | FG-GAP 3 |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000320031 | + | 23 | 26 | 236_292 | 973.0 | 1330.3333333333333 | Repeat | FG-GAP 4 |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000320031 | + | 23 | 26 | 293_354 | 973.0 | 1330.3333333333333 | Repeat | FG-GAP 5 |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000320031 | + | 23 | 26 | 356_411 | 973.0 | 1330.3333333333333 | Repeat | FG-GAP 6 |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000320031 | + | 23 | 26 | 38_103 | 973.0 | 1330.3333333333333 | Repeat | FG-GAP 1 |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000320031 | + | 23 | 26 | 415_477 | 973.0 | 1330.3333333333333 | Repeat | FG-GAP 7 |
Tgene | CASC3 | chr17:48158772 | chr17:38318006 | ENST00000264645 | 2 | 14 | 392_395 | 99.0 | 1130.6666666666667 | Compositional bias | Note=Poly-Pro | |
Tgene | CASC3 | chr17:48158772 | chr17:38318006 | ENST00000264645 | 2 | 14 | 425_428 | 99.0 | 1130.6666666666667 | Compositional bias | Note=Poly-Pro | |
Tgene | CASC3 | chr17:48158772 | chr17:38318006 | ENST00000264645 | 2 | 14 | 643_648 | 99.0 | 1130.6666666666667 | Compositional bias | Note=Poly-Pro | |
Tgene | CASC3 | chr17:48158772 | chr17:38318006 | ENST00000264645 | 2 | 14 | 692_695 | 99.0 | 1130.6666666666667 | Compositional bias | Note=Poly-Pro | |
Tgene | CASC3 | chr17:48158772 | chr17:38318006 | ENST00000264645 | 2 | 14 | 204_210 | 99.0 | 1130.6666666666667 | Motif | Nuclear localization signal 1 | |
Tgene | CASC3 | chr17:48158772 | chr17:38318006 | ENST00000264645 | 2 | 14 | 254_262 | 99.0 | 1130.6666666666667 | Motif | Nuclear localization signal 2 | |
Tgene | CASC3 | chr17:48158772 | chr17:38318006 | ENST00000264645 | 2 | 14 | 462_466 | 99.0 | 1130.6666666666667 | Motif | Note=Nuclear export signal | |
Tgene | CASC3 | chr17:48158772 | chr17:38318006 | ENST00000264645 | 2 | 14 | 137_283 | 99.0 | 1130.6666666666667 | Region | Note=Sufficient to form the EJC | |
Tgene | CASC3 | chr17:48158772 | chr17:38318006 | ENST00000264645 | 2 | 14 | 377_703 | 99.0 | 1130.6666666666667 | Region | Note=Necessary for localization in cytoplasmic stress granules |
- Not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000007722 | + | 23 | 25 | 1017_1021 | 973.0 | 1067.0 | Motif | Note=GFFKR motif |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000320031 | + | 23 | 26 | 1017_1021 | 973.0 | 1330.3333333333333 | Motif | Note=GFFKR motif |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000007722 | + | 23 | 25 | 1015_1051 | 973.0 | 1067.0 | Topological domain | Cytoplasmic |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000007722 | + | 23 | 25 | 33_991 | 973.0 | 1067.0 | Topological domain | Extracellular |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000320031 | + | 23 | 26 | 1015_1051 | 973.0 | 1330.3333333333333 | Topological domain | Cytoplasmic |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000320031 | + | 23 | 26 | 33_991 | 973.0 | 1330.3333333333333 | Topological domain | Extracellular |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000007722 | + | 23 | 25 | 992_1014 | 973.0 | 1067.0 | Transmembrane | Helical |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000320031 | + | 23 | 26 | 992_1014 | 973.0 | 1330.3333333333333 | Transmembrane | Helical |
Tgene | CASC3 | chr17:48158772 | chr17:38318006 | ENST00000264645 | 2 | 14 | 95_131 | 99.0 | 1130.6666666666667 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CASC3 | chr17:48158772 | chr17:38318006 | ENST00000264645 | 2 | 14 | 41_46 | 99.0 | 1130.6666666666667 | Compositional bias | Note=Poly-Gly |
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Fusion Protein-Protein Interaction |
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Gene | PPI interactors |
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Gene | STRING network |
ITGA3 | |
CASC3 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000007722 | + | 23 | 25 | 1015_1021 | 973.0 | 1067.0 | HPS5 |
Hgene | ITGA3 | chr17:48158772 | chr17:38318006 | ENST00000320031 | + | 23 | 26 | 1015_1021 | 973.0 | 1330.3333333333333 | HPS5 |
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Related Drugs to ITGA3-CASC3 |
![]() (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
Hgene | Tgene | Drug | Source | PMID |
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Related Diseases to ITGA3-CASC3 |
![]() (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
Hgene | Tgene | Disease | Source | PMID |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |