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Center for Computational Systems Medicine level1
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Fusion Gene Summary

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Fusion Gene Sample Information

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Fusion ORF Analysis

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Fusion Amino Acid Sequences

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Fusion Protein Functional Features

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Fusion Protein-Protein Interaction

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Related drugs with this fusion protein

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Related disease with this fusion protein

Fusion Protein:PLAUR-CREB3L2

Fusion Protein Summary

check button Fusion gene summary
Fusion partner gene informationFusion gene name: PLAUR-CREB3L2
FusionPDB ID: 65925
FusionGDB2.0 ID: 65925
HgeneTgene
Gene symbol

PLAUR

CREB3L2

Gene ID

5329

64764

Gene nameplasminogen activator, urokinase receptorcAMP responsive element binding protein 3 like 2
SynonymsCD87|U-PAR|UPAR|URKRBBF2H7
Cytomap

19q13.31

7q33

Type of geneprotein-codingprotein-coding
Descriptionurokinase plasminogen activator surface receptormonocyte activation antigen Mo3u-plasminogen activator receptor form 2urokinase-type plasminogen activator (uPA) receptorcyclic AMP-responsive element-binding protein 3-like protein 2B-ZIB transcription factorBBF2 human homolog on chromosome 7FUS/BBF2H7 proteinTCAG_1951439basic transcription factor 2cAMP-responsive element-binding protein 3-like protein 2
Modification date2020032920200313
UniProtAcc.

Q70SY1

Ensembl transtripts involved in fusion geneENST idsENST00000221264, ENST00000339082, 
ENST00000340093, ENST00000601723, 
ENST00000468127, ENST00000330387, 
ENST00000452463, ENST00000456390, 
ENST00000458726, 
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0)* DoF score9 X 6 X 8=4325 X 10 X 5=250
# samples 109
** MAII scorelog2(10/432*10)=-2.11103131238874
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(9/250*10)=-1.47393118833241
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context (manual curation of fusion genes in FusionPDB)

PubMed: PLAUR [Title/Abstract] AND CREB3L2 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0)PLAUR(44169468)-CREB3L2(137600758), # samples:1
Anticipated loss of major functional domain due to fusion event.PLAUR-CREB3L2 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
PLAUR-CREB3L2 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
PLAUR-CREB3L2 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
PLAUR-CREB3L2 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgenePLAUR

GO:0043388

positive regulation of DNA binding

22984561

TgeneCREB3L2

GO:0045893

positive regulation of transcription, DNA-templated

17178827


check buttonFusion gene breakpoints across PLAUR (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across CREB3L2 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


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Fusion Gene Sample Information

check buttonFusion gene information from FusionGDB2.0.
check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4Non-CancerERR315424PLAURchr19

44169468

-CREB3L2chr7

137600758

-


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Fusion ORF Analysis


check buttonFusion information from ORFfinder translation from full-length transcript sequence from FusionPDB.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000339082PLAURchr1944169468-ENST00000330387CREB3L2chr7137600758-7097356461599517
ENST00000339082PLAURchr1944169468-ENST00000456390CREB3L2chr7137600758-2035356461419457
ENST00000339082PLAURchr1944169468-ENST00000452463CREB3L2chr7137600758-80035646783245
ENST00000339082PLAURchr1944169468-ENST00000458726CREB3L2chr7137600758-78735646783245
ENST00000601723PLAURchr1944169468-ENST00000330387CREB3L2chr7137600758-7084343331586517
ENST00000601723PLAURchr1944169468-ENST00000456390CREB3L2chr7137600758-2022343331406457
ENST00000601723PLAURchr1944169468-ENST00000452463CREB3L2chr7137600758-78734333770245
ENST00000601723PLAURchr1944169468-ENST00000458726CREB3L2chr7137600758-77434333770245
ENST00000340093PLAURchr1944169468-ENST00000330387CREB3L2chr7137600758-72815401701783537
ENST00000340093PLAURchr1944169468-ENST00000456390CREB3L2chr7137600758-22195401701603477
ENST00000340093PLAURchr1944169468-ENST00000452463CREB3L2chr7137600758-984540170967265
ENST00000340093PLAURchr1944169468-ENST00000458726CREB3L2chr7137600758-971540170967265
ENST00000221264PLAURchr1944169468-ENST00000330387CREB3L2chr7137600758-74787373671980537
ENST00000221264PLAURchr1944169468-ENST00000456390CREB3L2chr7137600758-24167373671800477
ENST00000221264PLAURchr1944169468-ENST00000452463CREB3L2chr7137600758-11817373671164265
ENST00000221264PLAURchr1944169468-ENST00000458726CREB3L2chr7137600758-11687373671164265

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000339082ENST00000330387PLAURchr1944169468-CREB3L2chr7137600758-0.0004335830.9995664
ENST00000339082ENST00000456390PLAURchr1944169468-CREB3L2chr7137600758-0.0043290030.99567103
ENST00000339082ENST00000452463PLAURchr1944169468-CREB3L2chr7137600758-0.0154729430.9845271
ENST00000339082ENST00000458726PLAURchr1944169468-CREB3L2chr7137600758-0.0144216140.9855784
ENST00000601723ENST00000330387PLAURchr1944169468-CREB3L2chr7137600758-0.0004243960.99957556
ENST00000601723ENST00000456390PLAURchr1944169468-CREB3L2chr7137600758-0.003976380.99602365
ENST00000601723ENST00000452463PLAURchr1944169468-CREB3L2chr7137600758-0.016097730.9839023
ENST00000601723ENST00000458726PLAURchr1944169468-CREB3L2chr7137600758-0.0146836830.98531634
ENST00000340093ENST00000330387PLAURchr1944169468-CREB3L2chr7137600758-0.0004527280.9995473
ENST00000340093ENST00000456390PLAURchr1944169468-CREB3L2chr7137600758-0.0047103330.9952897
ENST00000340093ENST00000452463PLAURchr1944169468-CREB3L2chr7137600758-0.01100720.98899275
ENST00000340093ENST00000458726PLAURchr1944169468-CREB3L2chr7137600758-0.0101803440.9898197
ENST00000221264ENST00000330387PLAURchr1944169468-CREB3L2chr7137600758-0.0004645820.99953544
ENST00000221264ENST00000456390PLAURchr1944169468-CREB3L2chr7137600758-0.0048680040.99513197
ENST00000221264ENST00000452463PLAURchr1944169468-CREB3L2chr7137600758-0.0099609450.99003905
ENST00000221264ENST00000458726PLAURchr1944169468-CREB3L2chr7137600758-0.0094637050.9905363

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Fusion Amino Acid Sequences


check button For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>65925_65925_1_PLAUR-CREB3L2_PLAUR_chr19_44169468_ENST00000221264_CREB3L2_chr7_137600758_ENST00000330387_length(amino acids)=537AA_BP=123
MRPEGEKTCRDPAHRSCPRDMGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHS
EKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSDEVESEKWYLSTDFPSTSIKTEPVTDEPPPGLVPSVTLTITAISTPLEKEEPPLEMN
TGVDSSCQTIIPKIKLEPHEVDQFLNFSPKEAPVDHLHLPPTPPSSHGSDSEGSLSPNPRLHPFSLPQTHSPSRAAPRAPSALSSSPLLT
APHKLQGSGPLVLTEEEKRTLIAEGYPIPTKLPLSKSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVL
ENTNRTLLQQLQKLQTLVMGKVSRTCKLAGTQTGTCLMVVVLCFAVAFGSFFQGYGPYPSATKMALPSQHSLQEPYTASVVRSRNLLIYE

--------------------------------------------------------------

>65925_65925_2_PLAUR-CREB3L2_PLAUR_chr19_44169468_ENST00000221264_CREB3L2_chr7_137600758_ENST00000452463_length(amino acids)=265AA_BP=123
MRPEGEKTCRDPAHRSCPRDMGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHS
EKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSDEVESEKWYLSTDFPSTSIKTEPVTDEPPPGLVPSVTLTITAISTPLEKEEPPLEMN

--------------------------------------------------------------

>65925_65925_3_PLAUR-CREB3L2_PLAUR_chr19_44169468_ENST00000221264_CREB3L2_chr7_137600758_ENST00000456390_length(amino acids)=477AA_BP=123
MRPEGEKTCRDPAHRSCPRDMGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHS
EKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSDEVESEKWYLSTDFPSTSIKTEPVTDEPPPGLVPSVTLTITAISTPLEKEEPPLEMN
TGVDSSCQTIIPKIKLEPHEVDQFLNFSPKEAPVDHLHLPPTPPSSHGSDSEGSLSPNPRLHPFSLPQTHSPSRAAPRAPSALSSSPLLT
APHKLQGSGPLVLTEEEKRTLIAEGYPIPTKLPLSKSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVL
ENTNRTLLQQLQKLQTLVMGKVSRTCKLAGTQTGTCLMVVVLCFAVAFGSFFQGYGPYPSATKMALPSQHSLQEPYTASVGKTACGKLGR

--------------------------------------------------------------

>65925_65925_4_PLAUR-CREB3L2_PLAUR_chr19_44169468_ENST00000221264_CREB3L2_chr7_137600758_ENST00000458726_length(amino acids)=265AA_BP=123
MRPEGEKTCRDPAHRSCPRDMGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHS
EKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSDEVESEKWYLSTDFPSTSIKTEPVTDEPPPGLVPSVTLTITAISTPLEKEEPPLEMN

--------------------------------------------------------------

>65925_65925_5_PLAUR-CREB3L2_PLAUR_chr19_44169468_ENST00000339082_CREB3L2_chr7_137600758_ENST00000330387_length(amino acids)=517AA_BP=103
MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTE
VVCGLDLCNQGNSDEVESEKWYLSTDFPSTSIKTEPVTDEPPPGLVPSVTLTITAISTPLEKEEPPLEMNTGVDSSCQTIIPKIKLEPHE
VDQFLNFSPKEAPVDHLHLPPTPPSSHGSDSEGSLSPNPRLHPFSLPQTHSPSRAAPRAPSALSSSPLLTAPHKLQGSGPLVLTEEEKRT
LIAEGYPIPTKLPLSKSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLENTNRTLLQQLQKLQTLVMG
KVSRTCKLAGTQTGTCLMVVVLCFAVAFGSFFQGYGPYPSATKMALPSQHSLQEPYTASVVRSRNLLIYEEHSPPEESSSPGSAGELGGW

--------------------------------------------------------------

>65925_65925_6_PLAUR-CREB3L2_PLAUR_chr19_44169468_ENST00000339082_CREB3L2_chr7_137600758_ENST00000452463_length(amino acids)=245AA_BP=103
MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTE
VVCGLDLCNQGNSDEVESEKWYLSTDFPSTSIKTEPVTDEPPPGLVPSVTLTITAISTPLEKEEPPLEMNTGVDSSCQTIIPKIKLEPHE

--------------------------------------------------------------

>65925_65925_7_PLAUR-CREB3L2_PLAUR_chr19_44169468_ENST00000339082_CREB3L2_chr7_137600758_ENST00000456390_length(amino acids)=457AA_BP=103
MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTE
VVCGLDLCNQGNSDEVESEKWYLSTDFPSTSIKTEPVTDEPPPGLVPSVTLTITAISTPLEKEEPPLEMNTGVDSSCQTIIPKIKLEPHE
VDQFLNFSPKEAPVDHLHLPPTPPSSHGSDSEGSLSPNPRLHPFSLPQTHSPSRAAPRAPSALSSSPLLTAPHKLQGSGPLVLTEEEKRT
LIAEGYPIPTKLPLSKSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLENTNRTLLQQLQKLQTLVMG
KVSRTCKLAGTQTGTCLMVVVLCFAVAFGSFFQGYGPYPSATKMALPSQHSLQEPYTASVGKTACGKLGRVLFYFPRAGFLSLPKGIFCE

--------------------------------------------------------------

>65925_65925_8_PLAUR-CREB3L2_PLAUR_chr19_44169468_ENST00000339082_CREB3L2_chr7_137600758_ENST00000458726_length(amino acids)=245AA_BP=103
MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTE
VVCGLDLCNQGNSDEVESEKWYLSTDFPSTSIKTEPVTDEPPPGLVPSVTLTITAISTPLEKEEPPLEMNTGVDSSCQTIIPKIKLEPHE

--------------------------------------------------------------

>65925_65925_9_PLAUR-CREB3L2_PLAUR_chr19_44169468_ENST00000340093_CREB3L2_chr7_137600758_ENST00000330387_length(amino acids)=537AA_BP=123
MRPEGEKTCRDPAHRSCPRDMGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHS
EKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSDEVESEKWYLSTDFPSTSIKTEPVTDEPPPGLVPSVTLTITAISTPLEKEEPPLEMN
TGVDSSCQTIIPKIKLEPHEVDQFLNFSPKEAPVDHLHLPPTPPSSHGSDSEGSLSPNPRLHPFSLPQTHSPSRAAPRAPSALSSSPLLT
APHKLQGSGPLVLTEEEKRTLIAEGYPIPTKLPLSKSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVL
ENTNRTLLQQLQKLQTLVMGKVSRTCKLAGTQTGTCLMVVVLCFAVAFGSFFQGYGPYPSATKMALPSQHSLQEPYTASVVRSRNLLIYE

--------------------------------------------------------------

>65925_65925_10_PLAUR-CREB3L2_PLAUR_chr19_44169468_ENST00000340093_CREB3L2_chr7_137600758_ENST00000452463_length(amino acids)=265AA_BP=123
MRPEGEKTCRDPAHRSCPRDMGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHS
EKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSDEVESEKWYLSTDFPSTSIKTEPVTDEPPPGLVPSVTLTITAISTPLEKEEPPLEMN

--------------------------------------------------------------

>65925_65925_11_PLAUR-CREB3L2_PLAUR_chr19_44169468_ENST00000340093_CREB3L2_chr7_137600758_ENST00000456390_length(amino acids)=477AA_BP=123
MRPEGEKTCRDPAHRSCPRDMGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHS
EKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSDEVESEKWYLSTDFPSTSIKTEPVTDEPPPGLVPSVTLTITAISTPLEKEEPPLEMN
TGVDSSCQTIIPKIKLEPHEVDQFLNFSPKEAPVDHLHLPPTPPSSHGSDSEGSLSPNPRLHPFSLPQTHSPSRAAPRAPSALSSSPLLT
APHKLQGSGPLVLTEEEKRTLIAEGYPIPTKLPLSKSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVL
ENTNRTLLQQLQKLQTLVMGKVSRTCKLAGTQTGTCLMVVVLCFAVAFGSFFQGYGPYPSATKMALPSQHSLQEPYTASVGKTACGKLGR

--------------------------------------------------------------

>65925_65925_12_PLAUR-CREB3L2_PLAUR_chr19_44169468_ENST00000340093_CREB3L2_chr7_137600758_ENST00000458726_length(amino acids)=265AA_BP=123
MRPEGEKTCRDPAHRSCPRDMGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHS
EKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSDEVESEKWYLSTDFPSTSIKTEPVTDEPPPGLVPSVTLTITAISTPLEKEEPPLEMN

--------------------------------------------------------------

>65925_65925_13_PLAUR-CREB3L2_PLAUR_chr19_44169468_ENST00000601723_CREB3L2_chr7_137600758_ENST00000330387_length(amino acids)=517AA_BP=103
MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTE
VVCGLDLCNQGNSDEVESEKWYLSTDFPSTSIKTEPVTDEPPPGLVPSVTLTITAISTPLEKEEPPLEMNTGVDSSCQTIIPKIKLEPHE
VDQFLNFSPKEAPVDHLHLPPTPPSSHGSDSEGSLSPNPRLHPFSLPQTHSPSRAAPRAPSALSSSPLLTAPHKLQGSGPLVLTEEEKRT
LIAEGYPIPTKLPLSKSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLENTNRTLLQQLQKLQTLVMG
KVSRTCKLAGTQTGTCLMVVVLCFAVAFGSFFQGYGPYPSATKMALPSQHSLQEPYTASVVRSRNLLIYEEHSPPEESSSPGSAGELGGW

--------------------------------------------------------------

>65925_65925_14_PLAUR-CREB3L2_PLAUR_chr19_44169468_ENST00000601723_CREB3L2_chr7_137600758_ENST00000452463_length(amino acids)=245AA_BP=103
MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTE
VVCGLDLCNQGNSDEVESEKWYLSTDFPSTSIKTEPVTDEPPPGLVPSVTLTITAISTPLEKEEPPLEMNTGVDSSCQTIIPKIKLEPHE

--------------------------------------------------------------

>65925_65925_15_PLAUR-CREB3L2_PLAUR_chr19_44169468_ENST00000601723_CREB3L2_chr7_137600758_ENST00000456390_length(amino acids)=457AA_BP=103
MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTE
VVCGLDLCNQGNSDEVESEKWYLSTDFPSTSIKTEPVTDEPPPGLVPSVTLTITAISTPLEKEEPPLEMNTGVDSSCQTIIPKIKLEPHE
VDQFLNFSPKEAPVDHLHLPPTPPSSHGSDSEGSLSPNPRLHPFSLPQTHSPSRAAPRAPSALSSSPLLTAPHKLQGSGPLVLTEEEKRT
LIAEGYPIPTKLPLSKSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLENTNRTLLQQLQKLQTLVMG
KVSRTCKLAGTQTGTCLMVVVLCFAVAFGSFFQGYGPYPSATKMALPSQHSLQEPYTASVGKTACGKLGRVLFYFPRAGFLSLPKGIFCE

--------------------------------------------------------------

>65925_65925_16_PLAUR-CREB3L2_PLAUR_chr19_44169468_ENST00000601723_CREB3L2_chr7_137600758_ENST00000458726_length(amino acids)=245AA_BP=103
MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTE
VVCGLDLCNQGNSDEVESEKWYLSTDFPSTSIKTEPVTDEPPPGLVPSVTLTITAISTPLEKEEPPLEMNTGVDSSCQTIIPKIKLEPHE

--------------------------------------------------------------

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Fusion Protein Functional Features


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr19:44169468/chr7:137600758)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.CREB3L2

Q70SY1

FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: Transcription factor involved in unfolded protein response (UPR). In the absence of endoplasmic reticulum (ER) stress, inserted into ER membranes, with N-terminal DNA-binding and transcription activation domains oriented toward the cytosolic face of the membrane. In response to ER stress, transported to the Golgi, where it is cleaved in a site-specific manner by resident proteases S1P/MBTPS1 and S2P/MBTPS2. The released N-terminal cytosolic domain is translocated to the nucleus to effect transcription of specific target genes. Plays a critical role in chondrogenesis by activating the transcription of SEC23A, which promotes the transport and secretion of cartilage matrix proteins, and possibly that of ER biogenesis-related genes (By similarity). In a neuroblastoma cell line, protects cells from ER stress-induced death (PubMed:17178827). In vitro activates transcription of target genes via direct binding to the CRE site (PubMed:17178827). {ECO:0000250|UniProtKB:Q8BH52, ECO:0000269|PubMed:17178827}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

* Minus value of BPloci means that the break pointn is located before the CDS.
- Retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneCREB3L2chr19:44169468chr7:137600758ENST00000330387112294_357106.33333333333333521.0DomainbZIP
TgeneCREB3L2chr19:44169468chr7:137600758ENST0000045246314294_357106.33333333333333249.0DomainbZIP
TgeneCREB3L2chr19:44169468chr7:137600758ENST00000456390110294_357106.33333333333333461.0DomainbZIP
TgeneCREB3L2chr19:44169468chr7:137600758ENST00000330387112427_430106.33333333333333521.0MotifS1P recognition
TgeneCREB3L2chr19:44169468chr7:137600758ENST0000045246314427_430106.33333333333333249.0MotifS1P recognition
TgeneCREB3L2chr19:44169468chr7:137600758ENST00000456390110427_430106.33333333333333461.0MotifS1P recognition
TgeneCREB3L2chr19:44169468chr7:137600758ENST00000330387112296_325106.33333333333333521.0RegionBasic motif
TgeneCREB3L2chr19:44169468chr7:137600758ENST00000330387112336_357106.33333333333333521.0RegionLeucine-zipper
TgeneCREB3L2chr19:44169468chr7:137600758ENST0000045246314296_325106.33333333333333249.0RegionBasic motif
TgeneCREB3L2chr19:44169468chr7:137600758ENST0000045246314336_357106.33333333333333249.0RegionLeucine-zipper
TgeneCREB3L2chr19:44169468chr7:137600758ENST00000456390110296_325106.33333333333333461.0RegionBasic motif
TgeneCREB3L2chr19:44169468chr7:137600758ENST00000456390110336_357106.33333333333333461.0RegionLeucine-zipper
TgeneCREB3L2chr19:44169468chr7:137600758ENST00000330387112401_520106.33333333333333521.0Topological domainLumenal
TgeneCREB3L2chr19:44169468chr7:137600758ENST0000045246314401_520106.33333333333333249.0Topological domainLumenal
TgeneCREB3L2chr19:44169468chr7:137600758ENST00000456390110401_520106.33333333333333461.0Topological domainLumenal
TgeneCREB3L2chr19:44169468chr7:137600758ENST00000330387112380_400106.33333333333333521.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneCREB3L2chr19:44169468chr7:137600758ENST0000045246314380_400106.33333333333333249.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneCREB3L2chr19:44169468chr7:137600758ENST00000456390110380_400106.33333333333333461.0TransmembraneHelical%3B Signal-anchor for type II membrane protein

- Not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgenePLAURchr19:44169468chr7:137600758ENST00000221264-36115_213103.33333333333333291.0DomainNote=UPAR/Ly6 2
HgenePLAURchr19:44169468chr7:137600758ENST00000221264-36214_305103.33333333333333291.0DomainNote=UPAR/Ly6 3
HgenePLAURchr19:44169468chr7:137600758ENST00000221264-3623_114103.33333333333333291.0DomainNote=UPAR/Ly6 1
HgenePLAURchr19:44169468chr7:137600758ENST00000339082-37115_213103.33333333333333282.0DomainNote=UPAR/Ly6 2
HgenePLAURchr19:44169468chr7:137600758ENST00000339082-37214_305103.33333333333333282.0DomainNote=UPAR/Ly6 3
HgenePLAURchr19:44169468chr7:137600758ENST00000339082-3723_114103.33333333333333282.0DomainNote=UPAR/Ly6 1
HgenePLAURchr19:44169468chr7:137600758ENST00000340093-37115_213103.33333333333333336.0DomainNote=UPAR/Ly6 2
HgenePLAURchr19:44169468chr7:137600758ENST00000340093-37214_305103.33333333333333336.0DomainNote=UPAR/Ly6 3
HgenePLAURchr19:44169468chr7:137600758ENST00000340093-3723_114103.33333333333333336.0DomainNote=UPAR/Ly6 1
TgeneCREB3L2chr19:44169468chr7:137600758ENST000003303871121_379106.33333333333333521.0Topological domainCytoplasmic
TgeneCREB3L2chr19:44169468chr7:137600758ENST00000452463141_379106.33333333333333249.0Topological domainCytoplasmic
TgeneCREB3L2chr19:44169468chr7:137600758ENST000004563901101_379106.33333333333333461.0Topological domainCytoplasmic


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Fusion Protein-Protein Interaction


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type from validated records (BIOGRID-3.4.160)
GenePPI interactors


check button Protein-protein interactors based on sequence similarity (STRING)
GeneSTRING network
PLAUR
CREB3L2all structure


check button - Retained interactions in fusion protein (protein functional feature from UniProt).
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost interactions due to fusion (protein functional feature from UniProt).
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs to PLAUR-CREB3L2


check button Drugs used for this fusion-positive patient.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDrugSourcePMID

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Related Diseases to PLAUR-CREB3L2


check button Diseases that have this fusion gene.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDiseaseSourcePMID

check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource