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Fusion Protein:PPFIBP1-VIM |
Fusion Protein Summary |
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Fusion partner gene information | Fusion gene name: PPFIBP1-VIM | FusionPDB ID: 67467 | FusionGDB2.0 ID: 67467 | Hgene | Tgene | Gene symbol | PPFIBP1 | VIM | Gene ID | 8496 | 7431 |
Gene name | PPFIA binding protein 1 | vimentin | |
Synonyms | L2|SGT2|hSGT2|hSgt2p | - | |
Cytomap | 12p11.23-p11.22 | 10p13 | |
Type of gene | protein-coding | protein-coding | |
Description | liprin-beta-1PTPRF interacting protein, binding protein 1 (liprin beta 1)PTPRF-interacting protein-binding protein 1liprin related proteinprotein-tyrosine phosphatase receptor-type f polypeptide-interacting protein-binding protein 1 | vimentinepididymis secretory sperm binding protein | |
Modification date | 20200313 | 20200327 | |
UniProtAcc | Q86W92 | VMAC | |
Ensembl transtripts involved in fusion gene | ENST ids | ENST00000228425, ENST00000318304, ENST00000537927, ENST00000542629, ENST00000535047, ENST00000541633, ENST00000545334, | ENST00000485947, ENST00000224237, ENST00000544301, |
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0) | * DoF score | 20 X 14 X 13=3640 | 42 X 25 X 11=11550 |
# samples | 26 | 41 | |
** MAII score | log2(26/3640*10)=-3.8073549220576 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(41/11550*10)=-4.81612513168534 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context (manual curation of fusion genes in FusionPDB) | PubMed: PPFIBP1 [Title/Abstract] AND VIM [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0) | PPFIBP1(27807747)-VIM(17277167), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | PPFIBP1-VIM seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. PPFIBP1-VIM seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. PPFIBP1-VIM seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. PPFIBP1-VIM seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Fusion Gene Sample Information |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | OV | TCGA-29-1690 | PPFIBP1 | chr12 | 27807747 | + | VIM | chr10 | 17277167 | + |
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Fusion ORF Analysis |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000537927 | PPFIBP1 | chr12 | 27807747 | + | ENST00000544301 | VIM | chr10 | 17277167 | + | 1405 | 698 | 257 | 1090 | 277 |
ENST00000537927 | PPFIBP1 | chr12 | 27807747 | + | ENST00000224237 | VIM | chr10 | 17277167 | + | 1413 | 698 | 257 | 1090 | 277 |
ENST00000318304 | PPFIBP1 | chr12 | 27807747 | + | ENST00000544301 | VIM | chr10 | 17277167 | + | 1686 | 979 | 250 | 1371 | 373 |
ENST00000318304 | PPFIBP1 | chr12 | 27807747 | + | ENST00000224237 | VIM | chr10 | 17277167 | + | 1694 | 979 | 250 | 1371 | 373 |
ENST00000542629 | PPFIBP1 | chr12 | 27807747 | + | ENST00000544301 | VIM | chr10 | 17277167 | + | 1668 | 961 | 232 | 1353 | 373 |
ENST00000542629 | PPFIBP1 | chr12 | 27807747 | + | ENST00000224237 | VIM | chr10 | 17277167 | + | 1676 | 961 | 232 | 1353 | 373 |
ENST00000228425 | PPFIBP1 | chr12 | 27807747 | + | ENST00000544301 | VIM | chr10 | 17277167 | + | 1636 | 929 | 200 | 1321 | 373 |
ENST00000228425 | PPFIBP1 | chr12 | 27807747 | + | ENST00000224237 | VIM | chr10 | 17277167 | + | 1644 | 929 | 200 | 1321 | 373 |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000537927 | ENST00000544301 | PPFIBP1 | chr12 | 27807747 | + | VIM | chr10 | 17277167 | + | 0.001461703 | 0.99853826 |
ENST00000537927 | ENST00000224237 | PPFIBP1 | chr12 | 27807747 | + | VIM | chr10 | 17277167 | + | 0.001464236 | 0.99853575 |
ENST00000318304 | ENST00000544301 | PPFIBP1 | chr12 | 27807747 | + | VIM | chr10 | 17277167 | + | 0.001352317 | 0.99864775 |
ENST00000318304 | ENST00000224237 | PPFIBP1 | chr12 | 27807747 | + | VIM | chr10 | 17277167 | + | 0.001322595 | 0.99867743 |
ENST00000542629 | ENST00000544301 | PPFIBP1 | chr12 | 27807747 | + | VIM | chr10 | 17277167 | + | 0.001439078 | 0.99856097 |
ENST00000542629 | ENST00000224237 | PPFIBP1 | chr12 | 27807747 | + | VIM | chr10 | 17277167 | + | 0.001404382 | 0.99859565 |
ENST00000228425 | ENST00000544301 | PPFIBP1 | chr12 | 27807747 | + | VIM | chr10 | 17277167 | + | 0.001456866 | 0.99854314 |
ENST00000228425 | ENST00000224237 | PPFIBP1 | chr12 | 27807747 | + | VIM | chr10 | 17277167 | + | 0.001425869 | 0.99857414 |
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Fusion Amino Acid Sequences |
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>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP >67467_67467_1_PPFIBP1-VIM_PPFIBP1_chr12_27807747_ENST00000228425_VIM_chr10_17277167_ENST00000224237_length(amino acids)=373AA_BP=243 MGWNLPLTNNKMMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGSLRALHLVEDLRGLLEMMETDEKEGLRCQIPDSTA ETLVEWLQSQMTNGHLPGNGDVYQERLARLENDKESLVLQVSVLTDQVEAQGEKIRDLEFCLEEHREKVNATEEMLQQELLSRTSLETQK LDLMAEISNLKLKLTAVEKDRLDYEDKFRDTEGLIQEINDLRLKVSEMDSERLQYEKKLKSTKNESLERQMREMEENFAVEAANYQDTIG RLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSSLNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQ -------------------------------------------------------------- >67467_67467_2_PPFIBP1-VIM_PPFIBP1_chr12_27807747_ENST00000228425_VIM_chr10_17277167_ENST00000544301_length(amino acids)=373AA_BP=243 MGWNLPLTNNKMMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGSLRALHLVEDLRGLLEMMETDEKEGLRCQIPDSTA ETLVEWLQSQMTNGHLPGNGDVYQERLARLENDKESLVLQVSVLTDQVEAQGEKIRDLEFCLEEHREKVNATEEMLQQELLSRTSLETQK LDLMAEISNLKLKLTAVEKDRLDYEDKFRDTEGLIQEINDLRLKVSEMDSERLQYEKKLKSTKNESLERQMREMEENFAVEAANYQDTIG RLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSSLNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQ -------------------------------------------------------------- >67467_67467_3_PPFIBP1-VIM_PPFIBP1_chr12_27807747_ENST00000318304_VIM_chr10_17277167_ENST00000224237_length(amino acids)=373AA_BP=243 MGWNLPLTNNKMMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGSLRALHLVEDLRGLLEMMETDEKEGLRCQIPDSTA ETLVEWLQSQMTNGHLPGNGDVYQERLARLENDKESLVLQVSVLTDQVEAQGEKIRDLEFCLEEHREKVNATEEMLQQELLSRTSLETQK LDLMAEISNLKLKLTAVEKDRLDYEDKFRDTEGLIQEINDLRLKVSEMDSERLQYEKKLKSTKNESLERQMREMEENFAVEAANYQDTIG RLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSSLNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQ -------------------------------------------------------------- >67467_67467_4_PPFIBP1-VIM_PPFIBP1_chr12_27807747_ENST00000318304_VIM_chr10_17277167_ENST00000544301_length(amino acids)=373AA_BP=243 MGWNLPLTNNKMMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGSLRALHLVEDLRGLLEMMETDEKEGLRCQIPDSTA ETLVEWLQSQMTNGHLPGNGDVYQERLARLENDKESLVLQVSVLTDQVEAQGEKIRDLEFCLEEHREKVNATEEMLQQELLSRTSLETQK LDLMAEISNLKLKLTAVEKDRLDYEDKFRDTEGLIQEINDLRLKVSEMDSERLQYEKKLKSTKNESLERQMREMEENFAVEAANYQDTIG RLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSSLNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQ -------------------------------------------------------------- >67467_67467_5_PPFIBP1-VIM_PPFIBP1_chr12_27807747_ENST00000537927_VIM_chr10_17277167_ENST00000224237_length(amino acids)=277AA_BP=147 MLFKNTNGHLPGNGDVYQERLARLENDKESLVLQVSVLTDQVEAQGEKIRDLEFCLEEHREKVNATEEMLQQELLSRTSLETQKLDLMAE ISNLKLKLTAVEKDRLDYEDKFRDTEGLIQEINDLRLKVSEMDSERLQYEKKLKSTKNESLERQMREMEENFAVEAANYQDTIGRLQDEI QNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSSLNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETS -------------------------------------------------------------- >67467_67467_6_PPFIBP1-VIM_PPFIBP1_chr12_27807747_ENST00000537927_VIM_chr10_17277167_ENST00000544301_length(amino acids)=277AA_BP=147 MLFKNTNGHLPGNGDVYQERLARLENDKESLVLQVSVLTDQVEAQGEKIRDLEFCLEEHREKVNATEEMLQQELLSRTSLETQKLDLMAE ISNLKLKLTAVEKDRLDYEDKFRDTEGLIQEINDLRLKVSEMDSERLQYEKKLKSTKNESLERQMREMEENFAVEAANYQDTIGRLQDEI QNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSSLNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETS -------------------------------------------------------------- >67467_67467_7_PPFIBP1-VIM_PPFIBP1_chr12_27807747_ENST00000542629_VIM_chr10_17277167_ENST00000224237_length(amino acids)=373AA_BP=243 MGWNLPLTNNKMMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGSLRALHLVEDLRGLLEMMETDEKEGLRCQIPDSTA ETLVEWLQSQMTNGHLPGNGDVYQERLARLENDKESLVLQVSVLTDQVEAQGEKIRDLEFCLEEHREKVNATEEMLQQELLSRTSLETQK LDLMAEISNLKLKLTAVEKDRLDYEDKFRDTEGLIQEINDLRLKVSEMDSERLQYEKKLKSTKNESLERQMREMEENFAVEAANYQDTIG RLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSSLNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQ -------------------------------------------------------------- >67467_67467_8_PPFIBP1-VIM_PPFIBP1_chr12_27807747_ENST00000542629_VIM_chr10_17277167_ENST00000544301_length(amino acids)=373AA_BP=243 MGWNLPLTNNKMMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGSLRALHLVEDLRGLLEMMETDEKEGLRCQIPDSTA ETLVEWLQSQMTNGHLPGNGDVYQERLARLENDKESLVLQVSVLTDQVEAQGEKIRDLEFCLEEHREKVNATEEMLQQELLSRTSLETQK LDLMAEISNLKLKLTAVEKDRLDYEDKFRDTEGLIQEINDLRLKVSEMDSERLQYEKKLKSTKNESLERQMREMEENFAVEAANYQDTIG RLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSSLNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQ -------------------------------------------------------------- |
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Fusion Protein Functional Features |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr12:27807747/chr10:17277167) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
PPFIBP1 | VIM |
FUNCTION: May regulate the disassembly of focal adhesions. Did not bind receptor-like tyrosine phosphatases type 2A. {ECO:0000269|PubMed:9624153}. | 169 |
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- Retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | VIM | chr12:27807747 | chr10:17277167 | ENST00000224237 | 4 | 9 | 408_466 | 336.0 | 467.0 | Region | Note=Tail | |
Tgene | VIM | chr12:27807747 | chr10:17277167 | ENST00000544301 | 5 | 10 | 408_466 | 336.0 | 467.0 | Region | Note=Tail |
- Not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | PPFIBP1 | chr12:27807747 | chr10:17277167 | ENST00000228425 | + | 8 | 30 | 156_405 | 232.0 | 1006.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | PPFIBP1 | chr12:27807747 | chr10:17277167 | ENST00000318304 | + | 8 | 29 | 156_405 | 232.0 | 1012.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | PPFIBP1 | chr12:27807747 | chr10:17277167 | ENST00000535047 | + | 1 | 6 | 156_405 | 0 | 171.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | PPFIBP1 | chr12:27807747 | chr10:17277167 | ENST00000537927 | + | 6 | 27 | 156_405 | 79.0 | 859.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | PPFIBP1 | chr12:27807747 | chr10:17277167 | ENST00000542629 | + | 8 | 28 | 156_405 | 232.0 | 981.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | PPFIBP1 | chr12:27807747 | chr10:17277167 | ENST00000228425 | + | 8 | 30 | 647_711 | 232.0 | 1006.0 | Domain | SAM 1 |
Hgene | PPFIBP1 | chr12:27807747 | chr10:17277167 | ENST00000228425 | + | 8 | 30 | 719_782 | 232.0 | 1006.0 | Domain | SAM 2 |
Hgene | PPFIBP1 | chr12:27807747 | chr10:17277167 | ENST00000228425 | + | 8 | 30 | 804_876 | 232.0 | 1006.0 | Domain | SAM 3 |
Hgene | PPFIBP1 | chr12:27807747 | chr10:17277167 | ENST00000318304 | + | 8 | 29 | 647_711 | 232.0 | 1012.0 | Domain | SAM 1 |
Hgene | PPFIBP1 | chr12:27807747 | chr10:17277167 | ENST00000318304 | + | 8 | 29 | 719_782 | 232.0 | 1012.0 | Domain | SAM 2 |
Hgene | PPFIBP1 | chr12:27807747 | chr10:17277167 | ENST00000318304 | + | 8 | 29 | 804_876 | 232.0 | 1012.0 | Domain | SAM 3 |
Hgene | PPFIBP1 | chr12:27807747 | chr10:17277167 | ENST00000535047 | + | 1 | 6 | 647_711 | 0 | 171.0 | Domain | SAM 1 |
Hgene | PPFIBP1 | chr12:27807747 | chr10:17277167 | ENST00000535047 | + | 1 | 6 | 719_782 | 0 | 171.0 | Domain | SAM 2 |
Hgene | PPFIBP1 | chr12:27807747 | chr10:17277167 | ENST00000535047 | + | 1 | 6 | 804_876 | 0 | 171.0 | Domain | SAM 3 |
Hgene | PPFIBP1 | chr12:27807747 | chr10:17277167 | ENST00000537927 | + | 6 | 27 | 647_711 | 79.0 | 859.0 | Domain | SAM 1 |
Hgene | PPFIBP1 | chr12:27807747 | chr10:17277167 | ENST00000537927 | + | 6 | 27 | 719_782 | 79.0 | 859.0 | Domain | SAM 2 |
Hgene | PPFIBP1 | chr12:27807747 | chr10:17277167 | ENST00000537927 | + | 6 | 27 | 804_876 | 79.0 | 859.0 | Domain | SAM 3 |
Hgene | PPFIBP1 | chr12:27807747 | chr10:17277167 | ENST00000542629 | + | 8 | 28 | 647_711 | 232.0 | 981.0 | Domain | SAM 1 |
Hgene | PPFIBP1 | chr12:27807747 | chr10:17277167 | ENST00000542629 | + | 8 | 28 | 719_782 | 232.0 | 981.0 | Domain | SAM 2 |
Hgene | PPFIBP1 | chr12:27807747 | chr10:17277167 | ENST00000542629 | + | 8 | 28 | 804_876 | 232.0 | 981.0 | Domain | SAM 3 |
Tgene | VIM | chr12:27807747 | chr10:17277167 | ENST00000224237 | 4 | 9 | 154_245 | 336.0 | 467.0 | Coiled coil | Ontology_term=ECO:0000269 | |
Tgene | VIM | chr12:27807747 | chr10:17277167 | ENST00000224237 | 4 | 9 | 303_407 | 336.0 | 467.0 | Coiled coil | Ontology_term=ECO:0000269 | |
Tgene | VIM | chr12:27807747 | chr10:17277167 | ENST00000224237 | 4 | 9 | 96_131 | 336.0 | 467.0 | Coiled coil | Ontology_term=ECO:0000269 | |
Tgene | VIM | chr12:27807747 | chr10:17277167 | ENST00000544301 | 5 | 10 | 154_245 | 336.0 | 467.0 | Coiled coil | Ontology_term=ECO:0000269 | |
Tgene | VIM | chr12:27807747 | chr10:17277167 | ENST00000544301 | 5 | 10 | 303_407 | 336.0 | 467.0 | Coiled coil | Ontology_term=ECO:0000269 | |
Tgene | VIM | chr12:27807747 | chr10:17277167 | ENST00000544301 | 5 | 10 | 96_131 | 336.0 | 467.0 | Coiled coil | Ontology_term=ECO:0000269 | |
Tgene | VIM | chr12:27807747 | chr10:17277167 | ENST00000224237 | 4 | 9 | 103_411 | 336.0 | 467.0 | Domain | IF rod | |
Tgene | VIM | chr12:27807747 | chr10:17277167 | ENST00000544301 | 5 | 10 | 103_411 | 336.0 | 467.0 | Domain | IF rod | |
Tgene | VIM | chr12:27807747 | chr10:17277167 | ENST00000224237 | 4 | 9 | 326_329 | 336.0 | 467.0 | Motif | [IL]-x-C-x-x-[DE] motif | |
Tgene | VIM | chr12:27807747 | chr10:17277167 | ENST00000544301 | 5 | 10 | 326_329 | 336.0 | 467.0 | Motif | [IL]-x-C-x-x-[DE] motif | |
Tgene | VIM | chr12:27807747 | chr10:17277167 | ENST00000224237 | 4 | 9 | 132_153 | 336.0 | 467.0 | Region | Note=Linker 1 | |
Tgene | VIM | chr12:27807747 | chr10:17277167 | ENST00000224237 | 4 | 9 | 246_268 | 336.0 | 467.0 | Region | Note=Linker 12 | |
Tgene | VIM | chr12:27807747 | chr10:17277167 | ENST00000224237 | 4 | 9 | 269_407 | 336.0 | 467.0 | Region | Note=Coil 2 | |
Tgene | VIM | chr12:27807747 | chr10:17277167 | ENST00000224237 | 4 | 9 | 2_95 | 336.0 | 467.0 | Region | Note=Head | |
Tgene | VIM | chr12:27807747 | chr10:17277167 | ENST00000544301 | 5 | 10 | 132_153 | 336.0 | 467.0 | Region | Note=Linker 1 | |
Tgene | VIM | chr12:27807747 | chr10:17277167 | ENST00000544301 | 5 | 10 | 246_268 | 336.0 | 467.0 | Region | Note=Linker 12 | |
Tgene | VIM | chr12:27807747 | chr10:17277167 | ENST00000544301 | 5 | 10 | 269_407 | 336.0 | 467.0 | Region | Note=Coil 2 | |
Tgene | VIM | chr12:27807747 | chr10:17277167 | ENST00000544301 | 5 | 10 | 2_95 | 336.0 | 467.0 | Region | Note=Head |
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Fusion Protein-Protein Interaction |
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Gene | PPI interactors |
PPFIBP1 | YWHAG, YWHAQ, SFN, S100A4, PPFIBP1, ELAVL1, SH3KBP1, GRK5, LATS2, YWHAB, CDKN1A, CEP250, CEP76, TP53, VCP, ENO1, MOV10, NXF1, PNKD, NTRK1, PPFIA1, PPFIA2, PPFIA3, TMEM17, PPP2R1A, DYNLL1, KIF21A, Myh9, Myo1c, Flnb, Scai, YWHAZ, CDH1, HAO2, RAPGEF5, KANK2, DCAF7, EFTUD2, ESR2, HRAS, KRAS, NRAS, LAMP1, KIAA1429, RPS6KA2, BICD1, TNFSF13B, ETAA1, PBX2, OBSL1, MAGEA3, PRKCZ, P4HB, PRRC2C, ESR1, ANLN, KIF14, KIF20A, nsp16, HULC, DNAJC5B, DNAJC5, PRKACA, ANK3, ARF6, B3GAT1, C11orf52, CAV1, CXADR, DIRAS3, EBAG9, EPB41L4A, EZR, FLOT1, GJA1, GJD3, LAMP2, LAMP3, LAMTOR1, LCK, LMAN1, LYN, MARCKS, MLLT4, OCLN, PANX1, PARD3, RAB11A, RAB2A, RAB35, RAB5A, RAB5C, RAB9A, RHOB, STX4, STX6, STX7, ZFPL1, VPS33B, SMAD4, YWHAH, DYNLL2, S100A6, S100B, TACR3, AKR7L, BTNL9, MFNG, GPR17, PPFIBP2, HSF2BP, GCGR, METTL21B, SNAP29, NPAS1, INF2, UBXN6, EMID1, PLBD1, MAB21L2, CPLX2, CHCHD4, SERBP1, MEIS2, BIRC8, COMTD1, SPN, MUM1, PSG11, BTF3, TOLLIP, |
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Gene | STRING network |
PPFIBP1 | ![]() |
VIM |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs to PPFIBP1-VIM |
![]() (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
Hgene | Tgene | Drug | Source | PMID |
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Related Diseases to PPFIBP1-VIM |
![]() (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
Hgene | Tgene | Disease | Source | PMID |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | PPFIBP1 | C0085269 | Plasma Cell Granuloma, Pulmonary | 1 | CTD_human |