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Center for Computational Systems Medicine level1
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Fusion Gene Summary

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Fusion Gene Sample Information

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Fusion ORF Analysis

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Fusion Amino Acid Sequences

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Fusion Protein Functional Features

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Fusion Protein-Protein Interaction

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Related drugs with this fusion protein

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Related disease with this fusion protein

Fusion Protein:ATP11A-CYHR1

Fusion Protein Summary

check button Fusion gene summary
Fusion partner gene informationFusion gene name: ATP11A-CYHR1
FusionPDB ID: 7710
FusionGDB2.0 ID: 7710
HgeneTgene
Gene symbol

ATP11A

CYHR1

Gene ID

23250

50626

Gene nameATPase phospholipid transporting 11Acysteine and histidine rich 1
SynonymsATPIH|ATPISCHRP
Cytomap

13q34

8q24.3

Type of geneprotein-codingprotein-coding
Descriptionprobable phospholipid-transporting ATPase IHATPase, class VI, type 11AP4-ATPase flippase complex alpha subunit ATP11Aphospholipid-translocating ATPasepotential phospholipid-transporting ATPase IHcysteine and histidine-rich protein 1cysteine and histidine rich proteincysteine/histidine-rich 1
Modification date2020031320200313
UniProtAcc

Q6ZP68

Q6ZMK1

Ensembl transtripts involved in fusion geneENST idsENST00000283558, ENST00000375630, 
ENST00000375645, ENST00000487903, 
ENST00000419448, 		ENST00000306145, 
ENST00000403000, ENST00000424149, 
ENST00000438911, ENST00000530374, 
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0)* DoF score20 X 11 X 16=352013 X 8 X 9=936
# samples 3114
** MAII scorelog2(31/3520*10)=-3.50523530825042
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(14/936*10)=-2.74108170263844
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context (manual curation of fusion genes in FusionPDB)

PubMed: ATP11A [Title/Abstract] AND CYHR1 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0)ATP11A(113530255)-CYHR1(145678843), # samples:1
Anticipated loss of major functional domain due to fusion event.ATP11A-CYHR1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
ATP11A-CYHR1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
ATP11A-CYHR1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
ATP11A-CYHR1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check buttonFusion gene breakpoints across ATP11A (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across CYHR1 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


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Fusion Gene Sample Information

check buttonFusion gene information from FusionGDB2.0.
check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4COADTCGA-A6-5656-01AATP11Achr13

113530255

-CYHR1chr8

145678843

-


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Fusion ORF Analysis


check buttonFusion information from ORFfinder translation from full-length transcript sequence from FusionPDB.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000283558ATP11Achr13113530255-ENST00000438911CYHR1chr8145678843-505534155542571400
ENST00000283558ATP11Achr13113530255-ENST00000530374CYHR1chr8145678843-470634155542571400
ENST00000375630ATP11Achr13113530255-ENST00000438911CYHR1chr8145678843-505534155542571400
ENST00000375630ATP11Achr13113530255-ENST00000530374CYHR1chr8145678843-470634155542571400
ENST00000487903ATP11Achr13113530255-ENST00000438911CYHR1chr8145678843-505534155542571400
ENST00000487903ATP11Achr13113530255-ENST00000530374CYHR1chr8145678843-470634155542571400
ENST00000375645ATP11Achr13113530255-ENST00000438911CYHR1chr8145678843-505534155542571400
ENST00000375645ATP11Achr13113530255-ENST00000530374CYHR1chr8145678843-470634155542571400

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000283558ENST00000438911ATP11Achr13113530255-CYHR1chr8145678843-0.0017499280.99825007
ENST00000283558ENST00000530374ATP11Achr13113530255-CYHR1chr8145678843-0.0018919470.998108
ENST00000375630ENST00000438911ATP11Achr13113530255-CYHR1chr8145678843-0.0017499280.99825007
ENST00000375630ENST00000530374ATP11Achr13113530255-CYHR1chr8145678843-0.0018919470.998108
ENST00000487903ENST00000438911ATP11Achr13113530255-CYHR1chr8145678843-0.0017499280.99825007
ENST00000487903ENST00000530374ATP11Achr13113530255-CYHR1chr8145678843-0.0018919470.998108
ENST00000375645ENST00000438911ATP11Achr13113530255-CYHR1chr8145678843-0.0017499280.99825007
ENST00000375645ENST00000530374ATP11Achr13113530255-CYHR1chr8145678843-0.0018919470.998108

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Fusion Amino Acid Sequences


check button For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>7710_7710_1_ATP11A-CYHR1_ATP11A_chr13_113530255_ENST00000283558_CYHR1_chr8_145678843_ENST00000438911_length(amino acids)=1400AA_BP=1119
MNGGAGAAGGAMDCSLVRTLVHRYCAGEENWVDSRTIYVGHREPPPGAEAYIPQRYPDNRIVSSKYTFWNFIPKNLFEQFRRVANFYFLI
IFLVQLIIDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHKADNAMNQCPVHFIQHGKLVRKQSRKLRVGDIVMVKEDETFPCDLIFLSS
NRGDGTCHVTTASLDGESSHKTHYAVQDTKGFHTEEDIGGLHATIECEQPQPDLYKFVGRINVYSDLNDPVVRPLGSENLLLRGATLKNT
EKIFGVAIYTGMETKMALNYQSKSQKRSAVEKSMNAFLIVYLCILISKALINTVLKYMWQSEPFRDEPWYNQKTESERQRNLFLKAFTDF
LAFMVLFNYIIPVSMYVTVEMQKFLGSYFITWDEDMFDEETGEGPLVNTSDLNEELGQVEYIFTDKTGTLTENNMEFKECCIEGHVYVPH
VICNGQVLPESSGIDMIDSSPSVNGREREELFFRALCLCHTVQVKDDDSVDGPRKSPDGGKSCVYISSSPDEVALVEGVQRLGFTYLRLK
DNYMEILNRENHIERFELLEILSFDSVRRRMSVIVKSATGEIYLFCKGADSSIFPRVIEGKVDQIRARVERNAVEGLRTLCVAYKRLIQE
EYEGICKLLQAAKVALQDREKKLAEAYEQIEKDLTLLGATAVEDRLQEKAADTIEALQKAGIKVWVLTGDKMETAAATCYACKLFRRNTQ
LLELTTKRIEEQSLHDVLFELSKTVLRHSGSLTRDNLSGLSADMQDYGLIIDGAALSLIMKPREDGSSGNYRELFLEICRSCSAVLCCRM
APLQKAQIVKLIKFSKEHPITLAIGDGANDVSMILEAHVGIGVIGKEGRQAARNSDYAIPKFKHLKKMLLVHGHFYYIRISELVQYFFYK
NVCFIFPQFLYQFFCGFSQQTLYDTAYLTLYNISFTSLPILLYSLMEQHVGIDVLKRDPTLYRDVAKNALLRWRVFIYWTLLGLFDALVF
FFGAYFVFENTTVTSNGQIFGNWTFGTLVFTVMVFTVTLKLALDTHYWTWINHFVIWGSLLFYVVFSLLWGGVIWPFLNYQRMYYVFIQM
LSSGPAWLAIVLLVTISLLPDVLKKVLCRQLWPTATERVQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAV
SELPSECGFCLRQFPRSLLERHQKEECQDRVTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGSELMEILDGMDQSHRKEMQLYNSIFS
LLSFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLSFQLLLKSKVTAPLECSFLLLKGPYDDVR

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>7710_7710_2_ATP11A-CYHR1_ATP11A_chr13_113530255_ENST00000283558_CYHR1_chr8_145678843_ENST00000530374_length(amino acids)=1400AA_BP=1119
MNGGAGAAGGAMDCSLVRTLVHRYCAGEENWVDSRTIYVGHREPPPGAEAYIPQRYPDNRIVSSKYTFWNFIPKNLFEQFRRVANFYFLI
IFLVQLIIDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHKADNAMNQCPVHFIQHGKLVRKQSRKLRVGDIVMVKEDETFPCDLIFLSS
NRGDGTCHVTTASLDGESSHKTHYAVQDTKGFHTEEDIGGLHATIECEQPQPDLYKFVGRINVYSDLNDPVVRPLGSENLLLRGATLKNT
EKIFGVAIYTGMETKMALNYQSKSQKRSAVEKSMNAFLIVYLCILISKALINTVLKYMWQSEPFRDEPWYNQKTESERQRNLFLKAFTDF
LAFMVLFNYIIPVSMYVTVEMQKFLGSYFITWDEDMFDEETGEGPLVNTSDLNEELGQVEYIFTDKTGTLTENNMEFKECCIEGHVYVPH
VICNGQVLPESSGIDMIDSSPSVNGREREELFFRALCLCHTVQVKDDDSVDGPRKSPDGGKSCVYISSSPDEVALVEGVQRLGFTYLRLK
DNYMEILNRENHIERFELLEILSFDSVRRRMSVIVKSATGEIYLFCKGADSSIFPRVIEGKVDQIRARVERNAVEGLRTLCVAYKRLIQE
EYEGICKLLQAAKVALQDREKKLAEAYEQIEKDLTLLGATAVEDRLQEKAADTIEALQKAGIKVWVLTGDKMETAAATCYACKLFRRNTQ
LLELTTKRIEEQSLHDVLFELSKTVLRHSGSLTRDNLSGLSADMQDYGLIIDGAALSLIMKPREDGSSGNYRELFLEICRSCSAVLCCRM
APLQKAQIVKLIKFSKEHPITLAIGDGANDVSMILEAHVGIGVIGKEGRQAARNSDYAIPKFKHLKKMLLVHGHFYYIRISELVQYFFYK
NVCFIFPQFLYQFFCGFSQQTLYDTAYLTLYNISFTSLPILLYSLMEQHVGIDVLKRDPTLYRDVAKNALLRWRVFIYWTLLGLFDALVF
FFGAYFVFENTTVTSNGQIFGNWTFGTLVFTVMVFTVTLKLALDTHYWTWINHFVIWGSLLFYVVFSLLWGGVIWPFLNYQRMYYVFIQM
LSSGPAWLAIVLLVTISLLPDVLKKVLCRQLWPTATERVQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAV
SELPSECGFCLRQFPRSLLERHQKEECQDRVTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGSELMEILDGMDQSHRKEMQLYNSIFS
LLSFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLSFQLLLKSKVTAPLECSFLLLKGPYDDVR

--------------------------------------------------------------

>7710_7710_3_ATP11A-CYHR1_ATP11A_chr13_113530255_ENST00000375630_CYHR1_chr8_145678843_ENST00000438911_length(amino acids)=1400AA_BP=1119
MNGGAGAAGGAMDCSLVRTLVHRYCAGEENWVDSRTIYVGHREPPPGAEAYIPQRYPDNRIVSSKYTFWNFIPKNLFEQFRRVANFYFLI
IFLVQLIIDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHKADNAMNQCPVHFIQHGKLVRKQSRKLRVGDIVMVKEDETFPCDLIFLSS
NRGDGTCHVTTASLDGESSHKTHYAVQDTKGFHTEEDIGGLHATIECEQPQPDLYKFVGRINVYSDLNDPVVRPLGSENLLLRGATLKNT
EKIFGVAIYTGMETKMALNYQSKSQKRSAVEKSMNAFLIVYLCILISKALINTVLKYMWQSEPFRDEPWYNQKTESERQRNLFLKAFTDF
LAFMVLFNYIIPVSMYVTVEMQKFLGSYFITWDEDMFDEETGEGPLVNTSDLNEELGQVEYIFTDKTGTLTENNMEFKECCIEGHVYVPH
VICNGQVLPESSGIDMIDSSPSVNGREREELFFRALCLCHTVQVKDDDSVDGPRKSPDGGKSCVYISSSPDEVALVEGVQRLGFTYLRLK
DNYMEILNRENHIERFELLEILSFDSVRRRMSVIVKSATGEIYLFCKGADSSIFPRVIEGKVDQIRARVERNAVEGLRTLCVAYKRLIQE
EYEGICKLLQAAKVALQDREKKLAEAYEQIEKDLTLLGATAVEDRLQEKAADTIEALQKAGIKVWVLTGDKMETAAATCYACKLFRRNTQ
LLELTTKRIEEQSLHDVLFELSKTVLRHSGSLTRDNLSGLSADMQDYGLIIDGAALSLIMKPREDGSSGNYRELFLEICRSCSAVLCCRM
APLQKAQIVKLIKFSKEHPITLAIGDGANDVSMILEAHVGIGVIGKEGRQAARNSDYAIPKFKHLKKMLLVHGHFYYIRISELVQYFFYK
NVCFIFPQFLYQFFCGFSQQTLYDTAYLTLYNISFTSLPILLYSLMEQHVGIDVLKRDPTLYRDVAKNALLRWRVFIYWTLLGLFDALVF
FFGAYFVFENTTVTSNGQIFGNWTFGTLVFTVMVFTVTLKLALDTHYWTWINHFVIWGSLLFYVVFSLLWGGVIWPFLNYQRMYYVFIQM
LSSGPAWLAIVLLVTISLLPDVLKKVLCRQLWPTATERVQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAV
SELPSECGFCLRQFPRSLLERHQKEECQDRVTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGSELMEILDGMDQSHRKEMQLYNSIFS
LLSFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLSFQLLLKSKVTAPLECSFLLLKGPYDDVR

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>7710_7710_4_ATP11A-CYHR1_ATP11A_chr13_113530255_ENST00000375630_CYHR1_chr8_145678843_ENST00000530374_length(amino acids)=1400AA_BP=1119
MNGGAGAAGGAMDCSLVRTLVHRYCAGEENWVDSRTIYVGHREPPPGAEAYIPQRYPDNRIVSSKYTFWNFIPKNLFEQFRRVANFYFLI
IFLVQLIIDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHKADNAMNQCPVHFIQHGKLVRKQSRKLRVGDIVMVKEDETFPCDLIFLSS
NRGDGTCHVTTASLDGESSHKTHYAVQDTKGFHTEEDIGGLHATIECEQPQPDLYKFVGRINVYSDLNDPVVRPLGSENLLLRGATLKNT
EKIFGVAIYTGMETKMALNYQSKSQKRSAVEKSMNAFLIVYLCILISKALINTVLKYMWQSEPFRDEPWYNQKTESERQRNLFLKAFTDF
LAFMVLFNYIIPVSMYVTVEMQKFLGSYFITWDEDMFDEETGEGPLVNTSDLNEELGQVEYIFTDKTGTLTENNMEFKECCIEGHVYVPH
VICNGQVLPESSGIDMIDSSPSVNGREREELFFRALCLCHTVQVKDDDSVDGPRKSPDGGKSCVYISSSPDEVALVEGVQRLGFTYLRLK
DNYMEILNRENHIERFELLEILSFDSVRRRMSVIVKSATGEIYLFCKGADSSIFPRVIEGKVDQIRARVERNAVEGLRTLCVAYKRLIQE
EYEGICKLLQAAKVALQDREKKLAEAYEQIEKDLTLLGATAVEDRLQEKAADTIEALQKAGIKVWVLTGDKMETAAATCYACKLFRRNTQ
LLELTTKRIEEQSLHDVLFELSKTVLRHSGSLTRDNLSGLSADMQDYGLIIDGAALSLIMKPREDGSSGNYRELFLEICRSCSAVLCCRM
APLQKAQIVKLIKFSKEHPITLAIGDGANDVSMILEAHVGIGVIGKEGRQAARNSDYAIPKFKHLKKMLLVHGHFYYIRISELVQYFFYK
NVCFIFPQFLYQFFCGFSQQTLYDTAYLTLYNISFTSLPILLYSLMEQHVGIDVLKRDPTLYRDVAKNALLRWRVFIYWTLLGLFDALVF
FFGAYFVFENTTVTSNGQIFGNWTFGTLVFTVMVFTVTLKLALDTHYWTWINHFVIWGSLLFYVVFSLLWGGVIWPFLNYQRMYYVFIQM
LSSGPAWLAIVLLVTISLLPDVLKKVLCRQLWPTATERVQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAV
SELPSECGFCLRQFPRSLLERHQKEECQDRVTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGSELMEILDGMDQSHRKEMQLYNSIFS
LLSFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLSFQLLLKSKVTAPLECSFLLLKGPYDDVR

--------------------------------------------------------------

>7710_7710_5_ATP11A-CYHR1_ATP11A_chr13_113530255_ENST00000375645_CYHR1_chr8_145678843_ENST00000438911_length(amino acids)=1400AA_BP=1119
MNGGAGAAGGAMDCSLVRTLVHRYCAGEENWVDSRTIYVGHREPPPGAEAYIPQRYPDNRIVSSKYTFWNFIPKNLFEQFRRVANFYFLI
IFLVQLIIDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHKADNAMNQCPVHFIQHGKLVRKQSRKLRVGDIVMVKEDETFPCDLIFLSS
NRGDGTCHVTTASLDGESSHKTHYAVQDTKGFHTEEDIGGLHATIECEQPQPDLYKFVGRINVYSDLNDPVVRPLGSENLLLRGATLKNT
EKIFGVAIYTGMETKMALNYQSKSQKRSAVEKSMNAFLIVYLCILISKALINTVLKYMWQSEPFRDEPWYNQKTESERQRNLFLKAFTDF
LAFMVLFNYIIPVSMYVTVEMQKFLGSYFITWDEDMFDEETGEGPLVNTSDLNEELGQVEYIFTDKTGTLTENNMEFKECCIEGHVYVPH
VICNGQVLPESSGIDMIDSSPSVNGREREELFFRALCLCHTVQVKDDDSVDGPRKSPDGGKSCVYISSSPDEVALVEGVQRLGFTYLRLK
DNYMEILNRENHIERFELLEILSFDSVRRRMSVIVKSATGEIYLFCKGADSSIFPRVIEGKVDQIRARVERNAVEGLRTLCVAYKRLIQE
EYEGICKLLQAAKVALQDREKKLAEAYEQIEKDLTLLGATAVEDRLQEKAADTIEALQKAGIKVWVLTGDKMETAAATCYACKLFRRNTQ
LLELTTKRIEEQSLHDVLFELSKTVLRHSGSLTRDNLSGLSADMQDYGLIIDGAALSLIMKPREDGSSGNYRELFLEICRSCSAVLCCRM
APLQKAQIVKLIKFSKEHPITLAIGDGANDVSMILEAHVGIGVIGKEGRQAARNSDYAIPKFKHLKKMLLVHGHFYYIRISELVQYFFYK
NVCFIFPQFLYQFFCGFSQQTLYDTAYLTLYNISFTSLPILLYSLMEQHVGIDVLKRDPTLYRDVAKNALLRWRVFIYWTLLGLFDALVF
FFGAYFVFENTTVTSNGQIFGNWTFGTLVFTVMVFTVTLKLALDTHYWTWINHFVIWGSLLFYVVFSLLWGGVIWPFLNYQRMYYVFIQM
LSSGPAWLAIVLLVTISLLPDVLKKVLCRQLWPTATERVQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAV
SELPSECGFCLRQFPRSLLERHQKEECQDRVTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGSELMEILDGMDQSHRKEMQLYNSIFS
LLSFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLSFQLLLKSKVTAPLECSFLLLKGPYDDVR

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>7710_7710_6_ATP11A-CYHR1_ATP11A_chr13_113530255_ENST00000375645_CYHR1_chr8_145678843_ENST00000530374_length(amino acids)=1400AA_BP=1119
MNGGAGAAGGAMDCSLVRTLVHRYCAGEENWVDSRTIYVGHREPPPGAEAYIPQRYPDNRIVSSKYTFWNFIPKNLFEQFRRVANFYFLI
IFLVQLIIDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHKADNAMNQCPVHFIQHGKLVRKQSRKLRVGDIVMVKEDETFPCDLIFLSS
NRGDGTCHVTTASLDGESSHKTHYAVQDTKGFHTEEDIGGLHATIECEQPQPDLYKFVGRINVYSDLNDPVVRPLGSENLLLRGATLKNT
EKIFGVAIYTGMETKMALNYQSKSQKRSAVEKSMNAFLIVYLCILISKALINTVLKYMWQSEPFRDEPWYNQKTESERQRNLFLKAFTDF
LAFMVLFNYIIPVSMYVTVEMQKFLGSYFITWDEDMFDEETGEGPLVNTSDLNEELGQVEYIFTDKTGTLTENNMEFKECCIEGHVYVPH
VICNGQVLPESSGIDMIDSSPSVNGREREELFFRALCLCHTVQVKDDDSVDGPRKSPDGGKSCVYISSSPDEVALVEGVQRLGFTYLRLK
DNYMEILNRENHIERFELLEILSFDSVRRRMSVIVKSATGEIYLFCKGADSSIFPRVIEGKVDQIRARVERNAVEGLRTLCVAYKRLIQE
EYEGICKLLQAAKVALQDREKKLAEAYEQIEKDLTLLGATAVEDRLQEKAADTIEALQKAGIKVWVLTGDKMETAAATCYACKLFRRNTQ
LLELTTKRIEEQSLHDVLFELSKTVLRHSGSLTRDNLSGLSADMQDYGLIIDGAALSLIMKPREDGSSGNYRELFLEICRSCSAVLCCRM
APLQKAQIVKLIKFSKEHPITLAIGDGANDVSMILEAHVGIGVIGKEGRQAARNSDYAIPKFKHLKKMLLVHGHFYYIRISELVQYFFYK
NVCFIFPQFLYQFFCGFSQQTLYDTAYLTLYNISFTSLPILLYSLMEQHVGIDVLKRDPTLYRDVAKNALLRWRVFIYWTLLGLFDALVF
FFGAYFVFENTTVTSNGQIFGNWTFGTLVFTVMVFTVTLKLALDTHYWTWINHFVIWGSLLFYVVFSLLWGGVIWPFLNYQRMYYVFIQM
LSSGPAWLAIVLLVTISLLPDVLKKVLCRQLWPTATERVQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAV
SELPSECGFCLRQFPRSLLERHQKEECQDRVTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGSELMEILDGMDQSHRKEMQLYNSIFS
LLSFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLSFQLLLKSKVTAPLECSFLLLKGPYDDVR

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>7710_7710_7_ATP11A-CYHR1_ATP11A_chr13_113530255_ENST00000487903_CYHR1_chr8_145678843_ENST00000438911_length(amino acids)=1400AA_BP=1119
MNGGAGAAGGAMDCSLVRTLVHRYCAGEENWVDSRTIYVGHREPPPGAEAYIPQRYPDNRIVSSKYTFWNFIPKNLFEQFRRVANFYFLI
IFLVQLIIDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHKADNAMNQCPVHFIQHGKLVRKQSRKLRVGDIVMVKEDETFPCDLIFLSS
NRGDGTCHVTTASLDGESSHKTHYAVQDTKGFHTEEDIGGLHATIECEQPQPDLYKFVGRINVYSDLNDPVVRPLGSENLLLRGATLKNT
EKIFGVAIYTGMETKMALNYQSKSQKRSAVEKSMNAFLIVYLCILISKALINTVLKYMWQSEPFRDEPWYNQKTESERQRNLFLKAFTDF
LAFMVLFNYIIPVSMYVTVEMQKFLGSYFITWDEDMFDEETGEGPLVNTSDLNEELGQVEYIFTDKTGTLTENNMEFKECCIEGHVYVPH
VICNGQVLPESSGIDMIDSSPSVNGREREELFFRALCLCHTVQVKDDDSVDGPRKSPDGGKSCVYISSSPDEVALVEGVQRLGFTYLRLK
DNYMEILNRENHIERFELLEILSFDSVRRRMSVIVKSATGEIYLFCKGADSSIFPRVIEGKVDQIRARVERNAVEGLRTLCVAYKRLIQE
EYEGICKLLQAAKVALQDREKKLAEAYEQIEKDLTLLGATAVEDRLQEKAADTIEALQKAGIKVWVLTGDKMETAAATCYACKLFRRNTQ
LLELTTKRIEEQSLHDVLFELSKTVLRHSGSLTRDNLSGLSADMQDYGLIIDGAALSLIMKPREDGSSGNYRELFLEICRSCSAVLCCRM
APLQKAQIVKLIKFSKEHPITLAIGDGANDVSMILEAHVGIGVIGKEGRQAARNSDYAIPKFKHLKKMLLVHGHFYYIRISELVQYFFYK
NVCFIFPQFLYQFFCGFSQQTLYDTAYLTLYNISFTSLPILLYSLMEQHVGIDVLKRDPTLYRDVAKNALLRWRVFIYWTLLGLFDALVF
FFGAYFVFENTTVTSNGQIFGNWTFGTLVFTVMVFTVTLKLALDTHYWTWINHFVIWGSLLFYVVFSLLWGGVIWPFLNYQRMYYVFIQM
LSSGPAWLAIVLLVTISLLPDVLKKVLCRQLWPTATERVQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAV
SELPSECGFCLRQFPRSLLERHQKEECQDRVTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGSELMEILDGMDQSHRKEMQLYNSIFS
LLSFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLSFQLLLKSKVTAPLECSFLLLKGPYDDVR

--------------------------------------------------------------

>7710_7710_8_ATP11A-CYHR1_ATP11A_chr13_113530255_ENST00000487903_CYHR1_chr8_145678843_ENST00000530374_length(amino acids)=1400AA_BP=1119
MNGGAGAAGGAMDCSLVRTLVHRYCAGEENWVDSRTIYVGHREPPPGAEAYIPQRYPDNRIVSSKYTFWNFIPKNLFEQFRRVANFYFLI
IFLVQLIIDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHKADNAMNQCPVHFIQHGKLVRKQSRKLRVGDIVMVKEDETFPCDLIFLSS
NRGDGTCHVTTASLDGESSHKTHYAVQDTKGFHTEEDIGGLHATIECEQPQPDLYKFVGRINVYSDLNDPVVRPLGSENLLLRGATLKNT
EKIFGVAIYTGMETKMALNYQSKSQKRSAVEKSMNAFLIVYLCILISKALINTVLKYMWQSEPFRDEPWYNQKTESERQRNLFLKAFTDF
LAFMVLFNYIIPVSMYVTVEMQKFLGSYFITWDEDMFDEETGEGPLVNTSDLNEELGQVEYIFTDKTGTLTENNMEFKECCIEGHVYVPH
VICNGQVLPESSGIDMIDSSPSVNGREREELFFRALCLCHTVQVKDDDSVDGPRKSPDGGKSCVYISSSPDEVALVEGVQRLGFTYLRLK
DNYMEILNRENHIERFELLEILSFDSVRRRMSVIVKSATGEIYLFCKGADSSIFPRVIEGKVDQIRARVERNAVEGLRTLCVAYKRLIQE
EYEGICKLLQAAKVALQDREKKLAEAYEQIEKDLTLLGATAVEDRLQEKAADTIEALQKAGIKVWVLTGDKMETAAATCYACKLFRRNTQ
LLELTTKRIEEQSLHDVLFELSKTVLRHSGSLTRDNLSGLSADMQDYGLIIDGAALSLIMKPREDGSSGNYRELFLEICRSCSAVLCCRM
APLQKAQIVKLIKFSKEHPITLAIGDGANDVSMILEAHVGIGVIGKEGRQAARNSDYAIPKFKHLKKMLLVHGHFYYIRISELVQYFFYK
NVCFIFPQFLYQFFCGFSQQTLYDTAYLTLYNISFTSLPILLYSLMEQHVGIDVLKRDPTLYRDVAKNALLRWRVFIYWTLLGLFDALVF
FFGAYFVFENTTVTSNGQIFGNWTFGTLVFTVMVFTVTLKLALDTHYWTWINHFVIWGSLLFYVVFSLLWGGVIWPFLNYQRMYYVFIQM
LSSGPAWLAIVLLVTISLLPDVLKKVLCRQLWPTATERVQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAV
SELPSECGFCLRQFPRSLLERHQKEECQDRVTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGSELMEILDGMDQSHRKEMQLYNSIFS
LLSFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLSFQLLLKSKVTAPLECSFLLLKGPYDDVR

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Fusion Protein Functional Features


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr13:113530255/chr8:145678843)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
ATP11A

Q6ZP68

CYHR1

Q6ZMK1


check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

* Minus value of BPloci means that the break pointn is located before the CDS.
- Retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneATP11Achr13:113530255chr8:145678843ENST00000283558-28291024_10291109.01135.0Topological domainCytoplasmic
HgeneATP11Achr13:113530255chr8:145678843ENST00000283558-28291051_10681109.01135.0Topological domainExtracellular
HgeneATP11Achr13:113530255chr8:145678843ENST00000283558-2829111_2961109.01135.0Topological domainCytoplasmic
HgeneATP11Achr13:113530255chr8:145678843ENST00000283558-28291_611109.01135.0Topological domainCytoplasmic
HgeneATP11Achr13:113530255chr8:145678843ENST00000283558-2829319_3491109.01135.0Topological domainExtracellular
HgeneATP11Achr13:113530255chr8:145678843ENST00000283558-2829373_8811109.01135.0Topological domainCytoplasmic
HgeneATP11Achr13:113530255chr8:145678843ENST00000283558-282983_881109.01135.0Topological domainExtracellular
HgeneATP11Achr13:113530255chr8:145678843ENST00000283558-2829903_9141109.01135.0Topological domainExtracellular
HgeneATP11Achr13:113530255chr8:145678843ENST00000283558-2829935_9641109.01135.0Topological domainCytoplasmic
HgeneATP11Achr13:113530255chr8:145678843ENST00000283558-2829987_10001109.01135.0Topological domainExtracellular
HgeneATP11Achr13:113530255chr8:145678843ENST00000375645-28301024_10291109.02857.0Topological domainCytoplasmic
HgeneATP11Achr13:113530255chr8:145678843ENST00000375645-28301051_10681109.02857.0Topological domainExtracellular
HgeneATP11Achr13:113530255chr8:145678843ENST00000375645-2830111_2961109.02857.0Topological domainCytoplasmic
HgeneATP11Achr13:113530255chr8:145678843ENST00000375645-28301_611109.02857.0Topological domainCytoplasmic
HgeneATP11Achr13:113530255chr8:145678843ENST00000375645-2830319_3491109.02857.0Topological domainExtracellular
HgeneATP11Achr13:113530255chr8:145678843ENST00000375645-2830373_8811109.02857.0Topological domainCytoplasmic
HgeneATP11Achr13:113530255chr8:145678843ENST00000375645-283083_881109.02857.0Topological domainExtracellular
HgeneATP11Achr13:113530255chr8:145678843ENST00000375645-2830903_9141109.02857.0Topological domainExtracellular
HgeneATP11Achr13:113530255chr8:145678843ENST00000375645-2830935_9641109.02857.0Topological domainCytoplasmic
HgeneATP11Achr13:113530255chr8:145678843ENST00000375645-2830987_10001109.02857.0Topological domainExtracellular
HgeneATP11Achr13:113530255chr8:145678843ENST00000487903-28301024_10291109.02878.0Topological domainCytoplasmic
HgeneATP11Achr13:113530255chr8:145678843ENST00000487903-28301051_10681109.02878.0Topological domainExtracellular
HgeneATP11Achr13:113530255chr8:145678843ENST00000487903-2830111_2961109.02878.0Topological domainCytoplasmic
HgeneATP11Achr13:113530255chr8:145678843ENST00000487903-28301_611109.02878.0Topological domainCytoplasmic
HgeneATP11Achr13:113530255chr8:145678843ENST00000487903-2830319_3491109.02878.0Topological domainExtracellular
HgeneATP11Achr13:113530255chr8:145678843ENST00000487903-2830373_8811109.02878.0Topological domainCytoplasmic
HgeneATP11Achr13:113530255chr8:145678843ENST00000487903-283083_881109.02878.0Topological domainExtracellular
HgeneATP11Achr13:113530255chr8:145678843ENST00000487903-2830903_9141109.02878.0Topological domainExtracellular
HgeneATP11Achr13:113530255chr8:145678843ENST00000487903-2830935_9641109.02878.0Topological domainCytoplasmic
HgeneATP11Achr13:113530255chr8:145678843ENST00000487903-2830987_10001109.02878.0Topological domainExtracellular
HgeneATP11Achr13:113530255chr8:145678843ENST00000283558-28291001_10231109.01135.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000283558-28291030_10501109.01135.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000283558-28291069_10931109.01135.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000283558-2829297_3181109.01135.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000283558-2829350_3721109.01135.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000283558-282962_821109.01135.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000283558-2829882_9021109.01135.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000283558-282989_1101109.01135.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000283558-2829915_9341109.01135.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000283558-2829965_9861109.01135.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000375645-28301001_10231109.02857.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000375645-28301030_10501109.02857.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000375645-28301069_10931109.02857.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000375645-2830297_3181109.02857.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000375645-2830350_3721109.02857.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000375645-283062_821109.02857.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000375645-2830882_9021109.02857.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000375645-283089_1101109.02857.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000375645-2830915_9341109.02857.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000375645-2830965_9861109.02857.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000487903-28301001_10231109.02878.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000487903-28301030_10501109.02878.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000487903-28301069_10931109.02878.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000487903-2830297_3181109.02878.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000487903-2830350_3721109.02878.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000487903-283062_821109.02878.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000487903-2830882_9021109.02878.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000487903-283089_1101109.02878.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000487903-2830915_9341109.02878.0TransmembraneHelical
HgeneATP11Achr13:113530255chr8:145678843ENST00000487903-2830965_9861109.02878.0TransmembraneHelical
TgeneCYHR1chr13:113530255chr8:145678843ENST0000030614503110_1830193.0Zinc fingerTRAF-type
TgeneCYHR1chr13:113530255chr8:145678843ENST000003061450368_1140193.0Zinc fingerNote=RING-type%3B degenerate
TgeneCYHR1chr13:113530255chr8:145678843ENST0000040300002110_1830193.0Zinc fingerTRAF-type
TgeneCYHR1chr13:113530255chr8:145678843ENST000004030000268_1140193.0Zinc fingerNote=RING-type%3B degenerate
TgeneCYHR1chr13:113530255chr8:145678843ENST0000042414903110_1830193.0Zinc fingerTRAF-type
TgeneCYHR1chr13:113530255chr8:145678843ENST000004241490368_1140193.0Zinc fingerNote=RING-type%3B degenerate
TgeneCYHR1chr13:113530255chr8:145678843ENST0000043891115110_18382.0363.0Zinc fingerTRAF-type

- Not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneATP11Achr13:113530255chr8:145678843ENST00000283558-28291094_11341109.01135.0Topological domainCytoplasmic
HgeneATP11Achr13:113530255chr8:145678843ENST00000375645-28301094_11341109.02857.0Topological domainCytoplasmic
HgeneATP11Achr13:113530255chr8:145678843ENST00000487903-28301094_11341109.02878.0Topological domainCytoplasmic
TgeneCYHR1chr13:113530255chr8:145678843ENST000004389111568_11482.0363.0Zinc fingerNote=RING-type%3B degenerate


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Fusion Protein-Protein Interaction


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type from validated records (BIOGRID-3.4.160)
GenePPI interactors


check button Protein-protein interactors based on sequence similarity (STRING)
GeneSTRING network
ATP11A
CYHR1


check button - Retained interactions in fusion protein (protein functional feature from UniProt).
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost interactions due to fusion (protein functional feature from UniProt).
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs to ATP11A-CYHR1


check button Drugs used for this fusion-positive patient.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDrugSourcePMID

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Related Diseases to ATP11A-CYHR1


check button Diseases that have this fusion gene.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDiseaseSourcePMID

check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource