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Fusion Protein:TMEM59-BAZ2B |
Fusion Protein Summary |
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Fusion partner gene information | Fusion gene name: TMEM59-BAZ2B | FusionPDB ID: 92174 | FusionGDB2.0 ID: 92174 | Hgene | Tgene | Gene symbol | TMEM59 | BAZ2B | Gene ID | 9528 | 29994 |
Gene name | transmembrane protein 59 | bromodomain adjacent to zinc finger domain 2B | |
Synonyms | C1orf8|DCF1|HSPC001|PRO195|UNQ169 | WALp4 | |
Cytomap | 1p32.3 | 2q24.2 | |
Type of gene | protein-coding | protein-coding | |
Description | transmembrane protein 59dendritic cell factor 1liver membrane-bound protein | bromodomain adjacent to zinc finger domain protein 2B | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | Q9UIF8 | |
Ensembl transtripts involved in fusion gene | ENST ids | ENST00000234831, ENST00000371341, ENST00000371344, ENST00000371348, ENST00000371337, ENST00000470395, | ENST00000483316, ENST00000343439, ENST00000355831, ENST00000392782, ENST00000392783, |
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0) | * DoF score | 9 X 11 X 6=594 | 9 X 10 X 5=450 |
# samples | 12 | 11 | |
** MAII score | log2(12/594*10)=-2.30742852519225 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(11/450*10)=-2.03242147769238 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context (manual curation of fusion genes in FusionPDB) | PubMed: TMEM59 [Title/Abstract] AND BAZ2B [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0) | TMEM59(54507397)-BAZ2B(160189197), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | TMEM59-BAZ2B seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. TMEM59-BAZ2B seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. TMEM59-BAZ2B seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. TMEM59-BAZ2B seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. TMEM59-BAZ2B seems lost the major protein functional domain in Tgene partner, which is a epigenetic factor due to the frame-shifted ORF. TMEM59-BAZ2B seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. TMEM59-BAZ2B seems lost the major protein functional domain in Tgene partner, which is a IUPHAR drug target due to the frame-shifted ORF. TMEM59-BAZ2B seems lost the major protein functional domain in Tgene partner, which is a transcription factor due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | TMEM59 | GO:0010955 | negative regulation of protein processing | 20427278 |
Hgene | TMEM59 | GO:0090285 | negative regulation of protein glycosylation in Golgi | 20427278 |
Hgene | TMEM59 | GO:1903077 | negative regulation of protein localization to plasma membrane | 20427278 |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Fusion Gene Sample Information |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | Non-Cancer | ERR315425 | TMEM59 | chr1 | 54507397 | - | BAZ2B | chr2 | 160189197 | - |
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Fusion ORF Analysis |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000371348 | TMEM59 | chr1 | 54507397 | - | ENST00000355831 | BAZ2B | chr2 | 160189197 | - | 3074 | 1077 | 1113 | 1787 | 224 |
ENST00000371348 | TMEM59 | chr1 | 54507397 | - | ENST00000343439 | BAZ2B | chr2 | 160189197 | - | 3074 | 1077 | 1113 | 1787 | 224 |
ENST00000371348 | TMEM59 | chr1 | 54507397 | - | ENST00000392782 | BAZ2B | chr2 | 160189197 | - | 3074 | 1077 | 1113 | 1787 | 224 |
ENST00000371348 | TMEM59 | chr1 | 54507397 | - | ENST00000392783 | BAZ2B | chr2 | 160189197 | - | 3074 | 1077 | 1113 | 1787 | 224 |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000371348 | ENST00000355831 | TMEM59 | chr1 | 54507397 | - | BAZ2B | chr2 | 160189197 | - | 0.004945552 | 0.9950545 |
ENST00000371348 | ENST00000343439 | TMEM59 | chr1 | 54507397 | - | BAZ2B | chr2 | 160189197 | - | 0.004945552 | 0.9950545 |
ENST00000371348 | ENST00000392782 | TMEM59 | chr1 | 54507397 | - | BAZ2B | chr2 | 160189197 | - | 0.004945552 | 0.9950545 |
ENST00000371348 | ENST00000392783 | TMEM59 | chr1 | 54507397 | - | BAZ2B | chr2 | 160189197 | - | 0.004945552 | 0.9950545 |
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Fusion Amino Acid Sequences |
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>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP >92174_92174_1_TMEM59-BAZ2B_TMEM59_chr1_54507397_ENST00000371348_BAZ2B_chr2_160189197_ENST00000343439_length(amino acids)=224AA_BP= MLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACIAKASGQTLKIKKLHVKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKDLK KRKMEENTSINLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFSTIREKLSSGQYPNLET -------------------------------------------------------------- >92174_92174_2_TMEM59-BAZ2B_TMEM59_chr1_54507397_ENST00000371348_BAZ2B_chr2_160189197_ENST00000355831_length(amino acids)=224AA_BP= MLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACIAKASGQTLKIKKLHVKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKDLK KRKMEENTSINLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFSTIREKLSSGQYPNLET -------------------------------------------------------------- >92174_92174_3_TMEM59-BAZ2B_TMEM59_chr1_54507397_ENST00000371348_BAZ2B_chr2_160189197_ENST00000392782_length(amino acids)=224AA_BP= MLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACIAKASGQTLKIKKLHVKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKDLK KRKMEENTSINLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFSTIREKLSSGQYPNLET -------------------------------------------------------------- >92174_92174_4_TMEM59-BAZ2B_TMEM59_chr1_54507397_ENST00000371348_BAZ2B_chr2_160189197_ENST00000392783_length(amino acids)=224AA_BP= MLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACIAKASGQTLKIKKLHVKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKDLK KRKMEENTSINLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFSTIREKLSSGQYPNLET -------------------------------------------------------------- |
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Fusion Protein Functional Features |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr1:54507397/chr2:160189197) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
. | BAZ2B |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Chromatin reader protein, which may play a role in transcriptional regulation via interaction with ISWI (By similarity) (PubMed:10662543). Involved in positively modulating the rate of age-related behavioral deterioration (By similarity). Represses the expression of mitochondrial function-related genes, perhaps by occupying their promoter regions, working in concert with histone methyltransferase EHMT1 (By similarity). {ECO:0000250|UniProtKB:A2AUY4, ECO:0000303|PubMed:10662543}. |
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- Retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000343439 | 31 | 36 | 2077_2147 | 1832.0 | 2069.0 | Domain | Bromo | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000355831 | 31 | 36 | 2077_2147 | 1898.0 | 2135.0 | Domain | Bromo | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392782 | 31 | 36 | 2077_2147 | 1896.0 | 2133.0 | Domain | Bromo | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392783 | 32 | 37 | 2077_2147 | 1932.0 | 2169.0 | Domain | Bromo | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000343439 | 31 | 36 | 1931_1981 | 1832.0 | 2069.0 | Zinc finger | PHD-type | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000355831 | 31 | 36 | 1931_1981 | 1898.0 | 2135.0 | Zinc finger | PHD-type | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392782 | 31 | 36 | 1931_1981 | 1896.0 | 2133.0 | Zinc finger | PHD-type | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392783 | 32 | 37 | 1931_1981 | 1932.0 | 2169.0 | Zinc finger | PHD-type |
- Not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | TMEM59 | chr1:54507397 | chr2:160189197 | ENST00000234831 | - | 5 | 8 | 263_281 | 208.33333333333334 | 324.0 | Motif | ATG16L1-binding motif |
Hgene | TMEM59 | chr1:54507397 | chr2:160189197 | ENST00000234831 | - | 5 | 8 | 260_323 | 208.33333333333334 | 324.0 | Topological domain | Cytoplasmic |
Hgene | TMEM59 | chr1:54507397 | chr2:160189197 | ENST00000234831 | - | 5 | 8 | 36_238 | 208.33333333333334 | 324.0 | Topological domain | Extracellular |
Hgene | TMEM59 | chr1:54507397 | chr2:160189197 | ENST00000234831 | - | 5 | 8 | 239_259 | 208.33333333333334 | 324.0 | Transmembrane | Helical |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000343439 | 31 | 36 | 1334_1375 | 1832.0 | 2069.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000343439 | 31 | 36 | 883_1061 | 1832.0 | 2069.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000355831 | 31 | 36 | 1334_1375 | 1898.0 | 2135.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000355831 | 31 | 36 | 883_1061 | 1898.0 | 2135.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392782 | 31 | 36 | 1334_1375 | 1896.0 | 2133.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392782 | 31 | 36 | 883_1061 | 1896.0 | 2133.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392783 | 32 | 37 | 1334_1375 | 1932.0 | 2169.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392783 | 32 | 37 | 883_1061 | 1932.0 | 2169.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000343439 | 31 | 36 | 1296_1339 | 1832.0 | 2069.0 | Compositional bias | Note=Asp-rich | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000343439 | 31 | 36 | 149_265 | 1832.0 | 2069.0 | Compositional bias | Note=Ser-rich | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000343439 | 31 | 36 | 269_275 | 1832.0 | 2069.0 | Compositional bias | Note=Poly-Glu | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000343439 | 31 | 36 | 595_666 | 1832.0 | 2069.0 | Compositional bias | Note=Asp/Glu-rich (acidic) | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000343439 | 31 | 36 | 837_868 | 1832.0 | 2069.0 | Compositional bias | Note=Arg-rich | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000343439 | 31 | 36 | 902_1061 | 1832.0 | 2069.0 | Compositional bias | Note=Lys-rich | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000355831 | 31 | 36 | 1296_1339 | 1898.0 | 2135.0 | Compositional bias | Note=Asp-rich | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000355831 | 31 | 36 | 149_265 | 1898.0 | 2135.0 | Compositional bias | Note=Ser-rich | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000355831 | 31 | 36 | 269_275 | 1898.0 | 2135.0 | Compositional bias | Note=Poly-Glu | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000355831 | 31 | 36 | 595_666 | 1898.0 | 2135.0 | Compositional bias | Note=Asp/Glu-rich (acidic) | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000355831 | 31 | 36 | 837_868 | 1898.0 | 2135.0 | Compositional bias | Note=Arg-rich | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000355831 | 31 | 36 | 902_1061 | 1898.0 | 2135.0 | Compositional bias | Note=Lys-rich | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392782 | 31 | 36 | 1296_1339 | 1896.0 | 2133.0 | Compositional bias | Note=Asp-rich | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392782 | 31 | 36 | 149_265 | 1896.0 | 2133.0 | Compositional bias | Note=Ser-rich | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392782 | 31 | 36 | 269_275 | 1896.0 | 2133.0 | Compositional bias | Note=Poly-Glu | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392782 | 31 | 36 | 595_666 | 1896.0 | 2133.0 | Compositional bias | Note=Asp/Glu-rich (acidic) | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392782 | 31 | 36 | 837_868 | 1896.0 | 2133.0 | Compositional bias | Note=Arg-rich | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392782 | 31 | 36 | 902_1061 | 1896.0 | 2133.0 | Compositional bias | Note=Lys-rich | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392783 | 32 | 37 | 1296_1339 | 1932.0 | 2169.0 | Compositional bias | Note=Asp-rich | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392783 | 32 | 37 | 149_265 | 1932.0 | 2169.0 | Compositional bias | Note=Ser-rich | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392783 | 32 | 37 | 269_275 | 1932.0 | 2169.0 | Compositional bias | Note=Poly-Glu | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392783 | 32 | 37 | 595_666 | 1932.0 | 2169.0 | Compositional bias | Note=Asp/Glu-rich (acidic) | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392783 | 32 | 37 | 837_868 | 1932.0 | 2169.0 | Compositional bias | Note=Arg-rich | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392783 | 32 | 37 | 902_1061 | 1932.0 | 2169.0 | Compositional bias | Note=Lys-rich | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000343439 | 31 | 36 | 1087_1152 | 1832.0 | 2069.0 | Domain | DDT | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000343439 | 31 | 36 | 739_810 | 1832.0 | 2069.0 | Domain | MBD | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000355831 | 31 | 36 | 1087_1152 | 1898.0 | 2135.0 | Domain | DDT | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000355831 | 31 | 36 | 739_810 | 1898.0 | 2135.0 | Domain | MBD | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392782 | 31 | 36 | 1087_1152 | 1896.0 | 2133.0 | Domain | DDT | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392782 | 31 | 36 | 739_810 | 1896.0 | 2133.0 | Domain | MBD | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392783 | 32 | 37 | 1087_1152 | 1932.0 | 2169.0 | Domain | DDT | |
Tgene | BAZ2B | chr1:54507397 | chr2:160189197 | ENST00000392783 | 32 | 37 | 739_810 | 1932.0 | 2169.0 | Domain | MBD |
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Fusion Protein-Protein Interaction |
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Gene | PPI interactors |
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Gene | STRING network |
TMEM59 | |
BAZ2B |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs to TMEM59-BAZ2B |
![]() (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
Hgene | Tgene | Drug | Source | PMID |
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Related Diseases to TMEM59-BAZ2B |
![]() (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
Hgene | Tgene | Disease | Source | PMID |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |