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Center for Computational Systems Medicine
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Gene Summary

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Translation studies in PubMed

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Exon Skipping Events

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Expression

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Expression Regulation

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Associated Genes

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Protein 3D Structure

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Protein-Protein Interaction

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Mutations

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Prognostic Analysis

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Gender Association

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Age Association

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Related Drugs

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Related Diseases

Translation Factor: DDX1 (NCBI Gene ID:1653)


Gene Summary

check button Gene Summary
Gene InformationGene Name: DDX1
Gene ID: 1653
Gene Symbol

DDX1

Gene ID

1653

Gene NameDEAD-box helicase 1
SynonymsDBP-RB|UKVH5d
Cytomap

2p24.3

Type of Geneprotein-coding
DescriptionATP-dependent RNA helicase DDX1DEAD (Asp-Glu-Ala-Asp) box helicase 1DEAD (Asp-Glu-Ala-Asp) box polypeptide 1DEAD box polypeptide 1DEAD box protein 1DEAD box protein retinoblastomaDEAD box-1DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 1DEAD/H-box h
Modification date20200313
UniProtAcc

Q92499


check button Child GO biological process term(s) under GO:0006412
GO IDGO term
GO:0006417Regulation of translation
GO:0006413Translational initiation
GO:0006412Translation


check button Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneDDX1

GO:0006302

double-strand break repair

18710941

HgeneDDX1

GO:0032508

DNA duplex unwinding

18710941

HgeneDDX1

GO:0090305

nucleic acid phosphodiester bond hydrolysis

18710941



check button Inferred gene age of translation factor.
GeneInferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25
DDX1>1119.25


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Translation Studies in PubMed

check button We searched PubMed using 'DDX1[title] AND translation [title] AND human.'
GeneTitlePMID
DDX1..


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Exon Skipping Events

check buttonSkipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
For more annotations, please visit our ExonSkipDB.
all structure

check button Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ENSTExon skip start (DNA)Exon Skip end (DNA)ORF
ENST000002330841573526815735320Frame-shift
ENST000003813411573526815735320Frame-shift
ENST000002330841573685715736887In-frame
ENST000003813411573685715736887In-frame
ENST000002330841574267115742755In-frame
ENST000003813411574267115742755In-frame
ENST000002330841574729815747437Frame-shift
ENST000003813411574729815747437Frame-shift
ENST000002330841575334715753408Frame-shift
ENST000003813411575334715753408Frame-shift
ENST000002330841575736715757466In-frame
ENST000003813411575736715757466In-frame
ENST000002330841576033115760520In-frame
ENST000003813411576033115760520In-frame
ENST000002330841576118815761240Frame-shift
ENST000003813411576118815761240Frame-shift
ENST000002330841576856815768641Frame-shift
ENST000003813411576856815768641Frame-shift
ENST000002330841576892015768963Frame-shift
ENST000003813411576892015768963Frame-shift

check button Exon skipping position in the amino acid sequence.
ENSTExon skip start (DNA)Exon Skip end (DNA)Len(transcript seq)Exon skip start (mRNA)Exon Skip end (mRNA)Len(amino acid seq)Exon skip start (AA)Exon Skip end (AA)
ENST00000233084157368571573688727234214507404454
ENST00000381341157368571573688728345225517404454
ENST0000023308415742671157427552723596679740102130
ENST0000038134115742671157427552834697780740102130
ENST000002330841575736715757466272313061404740339372
ENST000003813411575736715757466283414071505740339372
ENST000002330841576033115760520272314951683740402465
ENST000003813411576033115760520283415961784740402465

check button Potentially (partially) lost protein functional features of UniProt.
UniProtAccExon skip start (AA)Exon Skip end (AA)Function feature start (AA)Function feature end (AA)Functional feature typeFunctional feature desc.
Q924993393721740ChainID=PRO_0000054986;Note=ATP-dependent RNA helicase DDX1
Q924991021301740ChainID=PRO_0000054986;Note=ATP-dependent RNA helicase DDX1
Q9249944541740ChainID=PRO_0000054986;Note=ATP-dependent RNA helicase DDX1
Q924994024651740ChainID=PRO_0000054986;Note=ATP-dependent RNA helicase DDX1
Q924993393721740ChainID=PRO_0000054986;Note=ATP-dependent RNA helicase DDX1
Q924991021301740ChainID=PRO_0000054986;Note=ATP-dependent RNA helicase DDX1
Q9249944541740ChainID=PRO_0000054986;Note=ATP-dependent RNA helicase DDX1
Q924994024651740ChainID=PRO_0000054986;Note=ATP-dependent RNA helicase DDX1
Q924993393722428DomainNote=Helicase ATP-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00541
Q924991021302428DomainNote=Helicase ATP-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00541
Q9249944542428DomainNote=Helicase ATP-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00541
Q924994024652428DomainNote=Helicase ATP-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00541
Q924993393722428DomainNote=Helicase ATP-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00541
Q924991021302428DomainNote=Helicase ATP-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00541
Q9249944542428DomainNote=Helicase ATP-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00541
Q924994024652428DomainNote=Helicase ATP-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00541
Q9249910213070247DomainNote=B30.2/SPRY;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00548
Q9249910213070247DomainNote=B30.2/SPRY;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00548
Q9249944544653Nucleotide bindingNote=ATP;Ontology_term=ECO:0000305;evidence=ECO:0000305
Q9249944544653Nucleotide bindingNote=ATP;Ontology_term=ECO:0000305;evidence=ECO:0000305
Q924993393721525RegionNote=Necessary for interaction with RELA;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:19058135;Dbxref=PMID:19058135
Q924991021301525RegionNote=Necessary for interaction with RELA;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:19058135;Dbxref=PMID:19058135
Q9249944541525RegionNote=Necessary for interaction with RELA;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:19058135;Dbxref=PMID:19058135
Q924994024651525RegionNote=Necessary for interaction with RELA;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:19058135;Dbxref=PMID:19058135
Q924993393721525RegionNote=Necessary for interaction with RELA;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:19058135;Dbxref=PMID:19058135
Q924991021301525RegionNote=Necessary for interaction with RELA;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:19058135;Dbxref=PMID:19058135
Q9249944541525RegionNote=Necessary for interaction with RELA;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:19058135;Dbxref=PMID:19058135
Q924994024651525RegionNote=Necessary for interaction with RELA;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:19058135;Dbxref=PMID:19058135
Q924993393721448RegionNote=Interaction with dsRNA;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q91VR5
Q924991021301448RegionNote=Interaction with dsRNA;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q91VR5
Q9249944541448RegionNote=Interaction with dsRNA;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q91VR5
Q924994024651448RegionNote=Interaction with dsRNA;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q91VR5
Q924993393721448RegionNote=Interaction with dsRNA;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q91VR5
Q924991021301448RegionNote=Interaction with dsRNA;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q91VR5
Q9249944541448RegionNote=Interaction with dsRNA;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q91VR5
Q924994024651448RegionNote=Interaction with dsRNA;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q91VR5
Q924991021301295RegionNote=Necessary for interaction with HNRNPK;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12183465;Dbxref=PMID:12183465
Q9249944541295RegionNote=Necessary for interaction with HNRNPK;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12183465;Dbxref=PMID:12183465
Q924991021301295RegionNote=Necessary for interaction with HNRNPK;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12183465;Dbxref=PMID:12183465
Q9249944541295RegionNote=Necessary for interaction with HNRNPK;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12183465;Dbxref=PMID:12183465
Q92499339372370373MotifNote=DEAD box
Q92499339372370373MotifNote=DEAD box
Q924991021301128Alternative sequenceID=VSP_055453;Note=In isoform 3. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:14702039;Dbxref=PMID:14702039
Q9249944541128Alternative sequenceID=VSP_055453;Note=In isoform 3. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:14702039;Dbxref=PMID:14702039
Q924991021301128Alternative sequenceID=VSP_055453;Note=In isoform 3. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:14702039;Dbxref=PMID:14702039
Q9249944541128Alternative sequenceID=VSP_055453;Note=In isoform 3. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:14702039;Dbxref=PMID:14702039
Q9249910213098113Alternative sequenceID=VSP_055454;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:14702039;Dbxref=PMID:14702039
Q9249910213098113Alternative sequenceID=VSP_055454;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:14702039;Dbxref=PMID:14702039
Q9249944545252MutagenesisNote=Abolishes ability to promote guanylylation of RTCB. K->N;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24870230;Dbxref=PMID:24870230
Q9249944545252MutagenesisNote=Abolishes ability to promote guanylylation of RTCB. K->N;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24870230;Dbxref=PMID:24870230
Q92499339372371371MutagenesisNote=Inhibits the transcriptional activity of RELA and attenuates NF-kappa-B-mediated gene expression. E->G;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:19058135,ECO:0000269|PubMed:24870230;Dbxref=PMID:19058135,PMID:24870230
Q92499339372371371MutagenesisNote=Inhibits the transcriptional activity of RELA and attenuates NF-kappa-B-mediated gene expression. E->G;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:19058135,ECO:0000269|PubMed:24870230;Dbxref=PMID:19058135,PMID:24870230
Q92499339372371371MutagenesisNote=Abolishes ability to promote guanylylation of RTCB. E->Q;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:19058135,ECO:0000269|PubMed:24870230;Dbxref=PMID:19058135,PMID:24870230
Q92499339372371371MutagenesisNote=Abolishes ability to promote guanylylation of RTCB. E->Q;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:19058135,ECO:0000269|PubMed:24870230;Dbxref=PMID:19058135,PMID:24870230
Q92499102130102104Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4XW3
Q92499102130102104Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4XW3
Q92499102130110113Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4XW3
Q92499102130110113Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4XW3
Q92499102130120139Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4XW3
Q92499102130120139Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4XW3


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Expression


check buttonGene expression level across TCGA pancancer
all structure

check buttonGene expression level across GTEx pantissue
all structure

check buttonExpression level of gene isoforms across TCGA pancancer
all structure

check buttonExpression level of gene isoforms across GTEx pantissue
all structure

check buttonCancer(tissue) type-specific expression level of Translation factor using z-score distriution
all structure

check buttonDifferential expression between tumor and matched normal (in the cancer types with more than 10 matched samples)
all structure
Cancer typeTranslation factorFCadj.pval
HNSCDDX1-1.932647770477090.00148187079003037
LUADDDX1-1.615508365423821.45287170087739e-05
KIRCDDX1-4.014170908477512.90348670181982e-08
THCADDX1-2.144397974010629.38064110141239e-05


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Expression Regulation


check buttonTranslation factor expression regulation through miRNA binding
Cancer typeGenemiRNATargetScan binding score (Context++ score percentile)CoefficientPvalue


check buttonTranslation factor expression regulation through methylation in the promoter of Translation factor
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a

check buttonTranslation factor expression regulation through methylation in the gene body of Translation factor (positive regulation)
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a

check buttonTranslation factor expression regulation through copy number variation of Translation factor
Cancer typeGeneCoefficientPvalue
LUSCDDX1-0.1625839950.001947307
LIHCDDX10.0639096960.00877608
SARCDDX1-0.2702657080.020600634

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Associated Genes


check button Strongly correlated genes belong to cellular important gene groups with DDX1 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green)
all structure
Cancer typeGene groupTranslation factorCorrelated geneCoefficientPvalue
KICHEpifactorDDX1HAT10.8198408132.87E-23
KICHIUPHARDDX1HAT10.8198408132.87E-23
KICHTSGDDX1XRCC50.8224155281.61E-23
LAMLCell metabolism geneDDX1NUP1330.8105530121.39E-41
LAMLCell metabolism geneDDX1HSPD10.8154004641.89E-42
LAMLCell metabolism geneDDX1EPRS0.8524452354.91E-50
LAMLTFDDX1CEBPZ0.8472907067.33E-49
LAMLTSGDDX1HSPD10.8154004641.89E-42
UVMCell metabolism geneDDX1MANEA0.8002821745.28E-19
UVMCell metabolism geneDDX1CALM20.8010212024.64E-19
UVMCell metabolism geneDDX1ACSL30.8036032292.94E-19
UVMCell metabolism geneDDX1MGAT20.8041048292.69E-19
UVMCell metabolism geneDDX1PITPNB0.8050942372.25E-19
UVMCell metabolism geneDDX1ALG130.8053114182.16E-19
UVMCell metabolism geneDDX1RAP1B0.8065654281.73E-19
UVMCell metabolism geneDDX1PNPLA80.8072041321.54E-19
UVMCell metabolism geneDDX1NAMPT0.8075772251.44E-19
UVMCell metabolism geneDDX1CNOT20.8079824271.33E-19
UVMCell metabolism geneDDX1PSMD120.8085461.20E-19
UVMCell metabolism geneDDX1FAR10.8086477621.18E-19
UVMCell metabolism geneDDX1HIF1A0.8086999821.17E-19
UVMCell metabolism geneDDX1SRP540.8096182889.88E-20
UVMCell metabolism geneDDX1DLD0.8098014749.55E-20
UVMCell metabolism geneDDX1PLA2G12A0.8099246439.34E-20
UVMCell metabolism geneDDX1GRPEL20.8109461437.72E-20
UVMCell metabolism geneDDX1AZIN10.8131230145.14E-20
UVMCell metabolism geneDDX1ARFGEF20.8133423084.93E-20
UVMCell metabolism geneDDX1GLUD10.8137003074.61E-20
UVMCell metabolism geneDDX1NUPL10.813805854.52E-20
UVMCell metabolism geneDDX1PIKFYVE0.8146132573.88E-20
UVMCell metabolism geneDDX1GNPDA20.8152572913.43E-20
UVMCell metabolism geneDDX1IDI10.8195538181.49E-20
UVMCell metabolism geneDDX1DLAT0.8215081231.02E-20
UVMCell metabolism geneDDX1PAFAH1B10.8218211019.56E-21
UVMCell metabolism geneDDX1NUDT120.822970667.60E-21
UVMCell metabolism geneDDX1UGGT20.8238181596.41E-21
UVMCell metabolism geneDDX1UPRT0.8250051735.04E-21
UVMCell metabolism geneDDX1MDH10.8250876214.96E-21
UVMCell metabolism geneDDX1HMGCS10.8255384714.53E-21
UVMCell metabolism geneDDX1SACM1L0.8256750444.40E-21
UVMCell metabolism geneDDX1SGPP10.82703183.34E-21
UVMCell metabolism geneDDX1UGP20.8275152413.02E-21
UVMCell metabolism geneDDX1PIK3C2A0.8279933042.74E-21
UVMCell metabolism geneDDX1ALG10B0.8295075282.00E-21
UVMCell metabolism geneDDX1CLOCK0.8300205191.80E-21
UVMCell metabolism geneDDX1PGM20.8327027631.02E-21
UVMCell metabolism geneDDX1PRKAA10.8335134738.57E-22
UVMCell metabolism geneDDX1PANK30.8345540376.85E-22
UVMCell metabolism geneDDX1PSMA40.8367649664.24E-22
UVMCell metabolism geneDDX1TGS10.8367666044.24E-22
UVMCell metabolism geneDDX1PHAX0.8368955554.12E-22
UVMCell metabolism geneDDX1RANBP20.8379243153.29E-22
UVMCell metabolism geneDDX1POLR2B0.8382498033.06E-22
UVMCell metabolism geneDDX1VAPA0.8383871472.97E-22
UVMCell metabolism geneDDX1EPT10.8433237289.77E-23
UVMCell metabolism geneDDX1AGPS0.8436024899.17E-23
UVMCell metabolism geneDDX1VBP10.8438080198.74E-23
UVMCell metabolism geneDDX1NUPL20.8438967298.57E-23
UVMCell metabolism geneDDX1PPAT0.8443218167.77E-23
UVMCell metabolism geneDDX1LYPLA10.8456449145.72E-23
UVMCell metabolism geneDDX1PPP1CB0.8468903154.27E-23
UVMCell metabolism geneDDX1DIS30.848088613.22E-23
UVMCell metabolism geneDDX1EDEM30.8488417162.69E-23
UVMCell metabolism geneDDX1MCEE0.8495069512.30E-23
UVMCell metabolism geneDDX1SRP720.8496330292.23E-23
UVMCell metabolism geneDDX1PIK3C30.8529251331.00E-23
UVMCell metabolism geneDDX1HMGCR0.8552783365.61E-24
UVMCell metabolism geneDDX1NUP1070.8556675725.09E-24
UVMCell metabolism geneDDX1MED170.8563113054.33E-24
UVMCell metabolism geneDDX1TNPO10.8564413334.19E-24
UVMCell metabolism geneDDX1GPD20.8576179923.11E-24
UVMCell metabolism geneDDX1SPTLC10.8587006762.36E-24
UVMCell metabolism geneDDX1NUP500.8590192982.18E-24
UVMCell metabolism geneDDX1CNOT80.8610749891.28E-24
UVMCell metabolism geneDDX1MTMR60.8615472951.13E-24
UVMCell metabolism geneDDX1BPNT10.8630093017.69E-25
UVMCell metabolism geneDDX1PSME40.863235517.24E-25
UVMCell metabolism geneDDX1SEH1L0.8689563661.53E-25
UVMCell metabolism geneDDX1CCT20.8864172678.17E-28
UVMCell metabolism geneDDX1LCLAT10.8956589253.58E-29
UVMCell metabolism geneDDX1PSMC60.8973762481.94E-29
UVMCell metabolism geneDDX1PSMD140.8985231061.28E-29
UVMCell metabolism geneDDX1XPO10.9198395191.96E-33
UVMCGCDDX1PWWP2A0.8008935034.75E-19
UVMCGCDDX1EML40.8017094214.11E-19
UVMCGCDDX1BIRC60.8022460273.74E-19
UVMCGCDDX1ACSL30.8036032292.94E-19
UVMCGCDDX1HIF1A0.8086999821.17E-19
UVMCGCDDX1EZH20.8141140064.26E-20
UVMCGCDDX1BCLAF10.8158826553.04E-20
UVMCGCDDX1SMARCE10.8179973492.02E-20
UVMCGCDDX1ABI10.819935631.39E-20
UVMCGCDDX1USP80.8230829067.43E-21
UVMCGCDDX1NFE2L20.824481765.61E-21
UVMCGCDDX1ARID20.824762925.30E-21
UVMCGCDDX1SMAD40.8258169364.28E-21
UVMCGCDDX1HNRNPA2B10.8259128064.19E-21
UVMCGCDDX1DDX50.8277389712.88E-21
UVMCGCDDX1ZMYM20.8310034181.46E-21
UVMCGCDDX1KIF5B0.8314634441.33E-21
UVMCGCDDX1MAP2K40.835330365.80E-22
UVMCGCDDX1RANBP20.8379243153.29E-22
UVMCGCDDX1FIP1L10.8399414922.10E-22
UVMCGCDDX1STAG20.8416268211.44E-22
UVMCGCDDX1GOLGA50.8416734821.42E-22
UVMCGCDDX1TCF120.8470904954.08E-23
UVMCGCDDX1HSP90AA10.8474310583.76E-23
UVMCGCDDX1BAZ1A0.8499409712.07E-23
UVMCGCDDX1CREB10.8510653121.58E-23
UVMCGCDDX1CDC730.8515487711.41E-23
UVMCGCDDX1RAD210.8554022735.44E-24
UVMCGCDDX1POT10.8584969082.49E-24
UVMCGCDDX1RABEP10.8606732311.42E-24
UVMCGCDDX1BMPR1A0.8607401421.40E-24
UVMCGCDDX1SUZ120.8622666959.36E-25
UVMCGCDDX1SF3B10.8680888241.95E-25
UVMCGCDDX1PMS10.8772843991.39E-26
UVMCGCDDX1MSH20.8794469137.28E-27
UVMCGCDDX1CUL30.8798108286.51E-27
UVMCGCDDX1ATM0.8864304588.14E-28
UVMCGCDDX1FBXO110.9140511942.65E-32
UVMCGCDDX1XPO10.9198395191.96E-33
UVMEpifactorDDX1ANP32E0.8041455952.67E-19
UVMEpifactorDDX1RCOR30.8067306821.68E-19
UVMEpifactorDDX1NIPBL0.8075251221.45E-19
UVMEpifactorDDX1H2AFV0.8089547891.12E-19
UVMEpifactorDDX1USP150.8100781469.07E-20
UVMEpifactorDDX1CDK170.8124743085.81E-20
UVMEpifactorDDX1INO80D0.8124802115.80E-20
UVMEpifactorDDX1PCGF60.8139273224.42E-20
UVMEpifactorDDX1CTBP20.8139363444.41E-20
UVMEpifactorDDX1EZH20.8141140064.26E-20
UVMEpifactorDDX1BAZ2B0.8147027283.81E-20
UVMEpifactorDDX1SMARCE10.8179973492.02E-20
UVMEpifactorDDX1TAF50.818323331.90E-20
UVMEpifactorDDX1ZBTB330.8190576521.65E-20
UVMEpifactorDDX1SUPT7L0.8210398161.12E-20
UVMEpifactorDDX1ARID20.824762925.30E-21
UVMEpifactorDDX1TAF20.8259209694.19E-21
UVMEpifactorDDX1ARID4A0.8268183383.49E-21
UVMEpifactorDDX1BRMS1L0.8275259283.01E-21
UVMEpifactorDDX1CHD90.8282329642.60E-21
UVMEpifactorDDX1CLOCK0.8300205191.80E-21
UVMEpifactorDDX1TADA10.8309011481.49E-21
UVMEpifactorDDX1ZMYM20.8310034181.46E-21
UVMEpifactorDDX1CUL50.8322059861.13E-21
UVMEpifactorDDX1PRKAA10.8335134738.57E-22
UVMEpifactorDDX1RLIM0.8342752517.28E-22
UVMEpifactorDDX1EPC10.8355633435.51E-22
UVMEpifactorDDX1TDG0.8376106923.52E-22
UVMEpifactorDDX1JMJD1C0.8380152653.22E-22
UVMEpifactorDDX1EPC20.8382394183.07E-22
UVMEpifactorDDX1YEATS40.8428244371.10E-22
UVMEpifactorDDX1ATAD2B0.8428890271.08E-22
UVMEpifactorDDX1HMGB10.8467774074.39E-23
UVMEpifactorDDX1SMARCA50.8473114093.87E-23
UVMEpifactorDDX1BAZ1A0.8499409712.07E-23
UVMEpifactorDDX1CBX30.8501821721.96E-23
UVMEpifactorDDX1SIRT10.8513615831.47E-23
UVMEpifactorDDX1CDC730.8515487711.41E-23
UVMEpifactorDDX1BRCC30.8557184715.03E-24
UVMEpifactorDDX1UCHL50.8563262214.32E-24
UVMEpifactorDDX1NSL10.8570911873.56E-24
UVMEpifactorDDX1YY10.8574626793.24E-24
UVMEpifactorDDX1SMEK10.8575676793.15E-24
UVMEpifactorDDX1ATF20.8585354742.46E-24
UVMEpifactorDDX1ZRANB30.8585739722.44E-24
UVMEpifactorDDX1PARG0.8612176141.23E-24
UVMEpifactorDDX1SUZ120.8622666959.36E-25
UVMEpifactorDDX1PHF20L10.8626176588.53E-25
UVMEpifactorDDX1VRK10.8661724843.29E-25
UVMEpifactorDDX1FAM175B0.8668396882.75E-25
UVMEpifactorDDX1SF3B10.8680888241.95E-25
UVMEpifactorDDX1RAD54B0.868532051.72E-25
UVMEpifactorDDX1AEBP20.8743467453.31E-26
UVMEpifactorDDX1MASTL0.8784230349.92E-27
UVMEpifactorDDX1TAF70.8787999128.85E-27
UVMEpifactorDDX1CUL30.8798108286.51E-27
UVMEpifactorDDX1HAT10.8808228974.78E-27
UVMEpifactorDDX1CUL20.8832853572.22E-27
UVMEpifactorDDX1TLK10.8860502969.20E-28
UVMEpifactorDDX1ATM0.8864304588.14E-28
UVMEpifactorDDX1ACTR60.9010523545.01E-30
UVMEpifactorDDX1SMEK20.9142624762.42E-32
UVMIUPHARDDX1PRPF4B0.800597185.00E-19
UVMIUPHARDDX1IRAK40.8010162654.64E-19
UVMIUPHARDDX1BIRC60.8022460273.74E-19
UVMIUPHARDDX1KIF110.8030431373.25E-19
UVMIUPHARDDX1TMEM1650.8039904392.74E-19
UVMIUPHARDDX1ULK20.8048888362.34E-19
UVMIUPHARDDX1ATP6V1C10.8068984631.63E-19
UVMIUPHARDDX1ATP6V0A20.8087103281.17E-19
UVMIUPHARDDX1SLC25A460.8088787121.13E-19
UVMIUPHARDDX1RIOK30.809271031.05E-19
UVMIUPHARDDX1STK30.8098302969.50E-20
UVMIUPHARDDX1PLA2G12A0.8099246439.34E-20
UVMIUPHARDDX1STK17A0.8104877748.41E-20
UVMIUPHARDDX1CDK170.8124743085.81E-20
UVMIUPHARDDX1TRPM70.8134603674.82E-20
UVMIUPHARDDX1EZH20.8141140064.26E-20
UVMIUPHARDDX1PIKFYVE0.8146132573.88E-20
UVMIUPHARDDX1BAZ2B0.8147027283.81E-20
UVMIUPHARDDX1SRPK20.815070983.55E-20
UVMIUPHARDDX1EGLN10.817639252.17E-20
UVMIUPHARDDX1IDI10.8195538181.49E-20
UVMIUPHARDDX1ADAM100.8226126788.16E-21
UVMIUPHARDDX1NR2C10.8226133338.16E-21
UVMIUPHARDDX1MARK30.8226771478.06E-21
UVMIUPHARDDX1NFE2L20.824481765.61E-21
UVMIUPHARDDX1HMGCS10.8255384714.53E-21
UVMIUPHARDDX1TNKS20.8259062664.20E-21
UVMIUPHARDDX1SGPP10.82703183.34E-21
UVMIUPHARDDX1PIK3C2A0.8279933042.74E-21
UVMIUPHARDDX1BMPR20.8282666052.59E-21
UVMIUPHARDDX1TAOK30.8284370042.50E-21
UVMIUPHARDDX1ATP2B10.8288549312.29E-21
UVMIUPHARDDX1CLOCK0.8300205191.80E-21
UVMIUPHARDDX1PRKAA10.8335134738.57E-22
UVMIUPHARDDX1MAP2K40.835330365.80E-22
UVMIUPHARDDX1SLC30A50.8369962284.03E-22
UVMIUPHARDDX1NAPEPLD0.8370947263.94E-22
UVMIUPHARDDX1JMJD1C0.8380152653.22E-22
UVMIUPHARDDX1MAPK60.8382188933.08E-22
UVMIUPHARDDX1RIOK20.8404292971.88E-22
UVMIUPHARDDX1SLC30A60.8415654161.46E-22
UVMIUPHARDDX1ATAD2B0.8428890271.08E-22
UVMIUPHARDDX1XIAP0.8435034329.38E-23
UVMIUPHARDDX1PPAT0.8443218167.77E-23
UVMIUPHARDDX1TBK10.8443714017.68E-23
UVMIUPHARDDX1HSP90AA10.8474310583.76E-23
UVMIUPHARDDX1IDE0.8486565782.82E-23
UVMIUPHARDDX1BAZ1A0.8499409712.07E-23
UVMIUPHARDDX1SIRT10.8513615831.47E-23
UVMIUPHARDDX1PIK3C30.8529251331.00E-23
UVMIUPHARDDX1HMGCR0.8552783365.61E-24
UVMIUPHARDDX1SPTLC10.8587006762.36E-24
UVMIUPHARDDX1BMPR1A0.8607401421.40E-24
UVMIUPHARDDX1USP140.8611706881.25E-24
UVMIUPHARDDX1SLC30A90.8648632924.69E-25
UVMIUPHARDDX1VRK10.8661724843.29E-25
UVMIUPHARDDX1PLK40.8678882492.06E-25
UVMIUPHARDDX1MAGT10.876693041.66E-26
UVMIUPHARDDX1MASTL0.8784230349.92E-27
UVMIUPHARDDX1VRK20.8801981795.79E-27
UVMIUPHARDDX1HAT10.8808228974.78E-27
UVMIUPHARDDX1PRMT30.883912361.82E-27
UVMIUPHARDDX1ABCB100.8848266591.36E-27
UVMIUPHARDDX1TLK10.8860502969.20E-28
UVMIUPHARDDX1ATM0.8864304588.14E-28
UVMIUPHARDDX1ADAM170.8902078112.34E-28
UVMIUPHARDDX1MAP4K30.893461887.72E-29
UVMIUPHARDDX1PSMD140.8985231061.28E-29
UVMIUPHARDDX1FBXO110.9140511942.65E-32
UVMIUPHARDDX1XPO10.9198395191.96E-33
UVMKinaseDDX1PRPF4B0.800597185.00E-19
UVMKinaseDDX1IRAK40.8010162654.64E-19
UVMKinaseDDX1ULK20.8048888362.34E-19
UVMKinaseDDX1RIOK30.809271031.05E-19
UVMKinaseDDX1STK30.8098302969.50E-20
UVMKinaseDDX1STK17A0.8104877748.41E-20
UVMKinaseDDX1CDK170.8124743085.81E-20
UVMKinaseDDX1TRPM70.8134603674.82E-20
UVMKinaseDDX1SRPK20.815070983.55E-20
UVMKinaseDDX1MARK30.8226771478.06E-21
UVMKinaseDDX1BMPR20.8282666052.59E-21
UVMKinaseDDX1TAOK30.8284370042.50E-21
UVMKinaseDDX1PRKAA10.8335134738.57E-22
UVMKinaseDDX1MAP2K40.835330365.80E-22
UVMKinaseDDX1MAPK60.8382188933.08E-22
UVMKinaseDDX1RIOK20.8404292971.88E-22
UVMKinaseDDX1TBK10.8443714017.68E-23
UVMKinaseDDX1BAZ1A0.8499409712.07E-23
UVMKinaseDDX1BMPR1A0.8607401421.40E-24
UVMKinaseDDX1VRK10.8661724843.29E-25
UVMKinaseDDX1PLK40.8678882492.06E-25
UVMKinaseDDX1MASTL0.8784230349.92E-27
UVMKinaseDDX1VRK20.8801981795.79E-27
UVMKinaseDDX1TLK10.8860502969.20E-28
UVMKinaseDDX1ATM0.8864304588.14E-28
UVMKinaseDDX1MAP4K30.893461887.72E-29
UVMTFDDX1THAP90.8000497385.50E-19
UVMTFDDX1MYBL10.8002763625.29E-19
UVMTFDDX1ZNF410.8030898553.22E-19
UVMTFDDX1ZC3H80.8038001122.84E-19
UVMTFDDX1DMTF10.8046659892.43E-19
UVMTFDDX1ZNF4100.8050456352.27E-19
UVMTFDDX1ZNF140.8073078881.51E-19
UVMTFDDX1BACH10.807335921.50E-19
UVMTFDDX1ZNF2000.8077085071.40E-19
UVMTFDDX1VEZF10.8082132781.28E-19
UVMTFDDX1LIN540.8083348241.25E-19
UVMTFDDX1HIF1A0.8086999821.17E-19
UVMTFDDX1ZNF280D0.8089093341.13E-19
UVMTFDDX1THAP60.8097342329.67E-20
UVMTFDDX1ZNF585B0.8104048788.54E-20
UVMTFDDX1ZNF2680.810496388.40E-20
UVMTFDDX1ZNF4680.8107139338.07E-20
UVMTFDDX1CREBZF0.8110865427.53E-20
UVMTFDDX1ZNF1950.8111979997.37E-20
UVMTFDDX1ZNF4490.8114757747.00E-20
UVMTFDDX1ZNF2670.8123551975.94E-20
UVMTFDDX1ZNF1820.8128369045.42E-20
UVMTFDDX1ZNF260.8129374515.32E-20
UVMTFDDX1ZNF5550.8133725064.90E-20
UVMTFDDX1PCGF60.8139273224.42E-20
UVMTFDDX1BAZ2B0.8147027283.81E-20
UVMTFDDX1ZNF4320.8148007283.74E-20
UVMTFDDX1ZNF4840.814817213.73E-20
UVMTFDDX1ZNF450.8152840813.41E-20
UVMTFDDX1ZNF8000.8159742542.99E-20
UVMTFDDX1MEF2A0.8168489182.53E-20
UVMTFDDX1ZNF2070.8177347162.13E-20
UVMTFDDX1ZNF7010.8189337991.69E-20
UVMTFDDX1ZBTB330.8190576521.65E-20
UVMTFDDX1ZNF4300.8218392849.52E-21
UVMTFDDX1ZNF1430.8220542269.12E-21
UVMTFDDX1NR2C10.8226133338.16E-21
UVMTFDDX1ZNF780A0.8226580738.09E-21
UVMTFDDX1ADNP20.8228420497.80E-21
UVMTFDDX1SMAD50.822963127.61E-21
UVMTFDDX1NFE2L20.824481765.61E-21
UVMTFDDX1ZNF6750.824616415.46E-21
UVMTFDDX1ARID20.824762925.30E-21
UVMTFDDX1ZNF3970.8253338434.72E-21
UVMTFDDX1ZNF5720.8254356234.62E-21
UVMTFDDX1TOPORS0.8256809084.40E-21
UVMTFDDX1ELF10.8257561684.33E-21
UVMTFDDX1SMAD40.8258169364.28E-21
UVMTFDDX1ZNF1460.8261451594.00E-21
UVMTFDDX1FOXN20.8271540443.25E-21
UVMTFDDX1ZNF3830.8274277743.08E-21
UVMTFDDX1ZNF1800.8283306572.55E-21
UVMTFDDX1AHCTF10.8293824212.05E-21
UVMTFDDX1CLOCK0.8300205191.80E-21
UVMTFDDX1ZNF7910.8312601891.38E-21
UVMTFDDX1RBAK0.8313964581.34E-21
UVMTFDDX1ZNF5460.8323364771.10E-21
UVMTFDDX1ZNF33A0.8345827876.81E-22
UVMTFDDX1ZNF75D0.8355643725.51E-22
UVMTFDDX1ZNF5100.8359745485.04E-22
UVMTFDDX1GPBP10.8361145654.89E-22
UVMTFDDX1ZNF5270.8370287994.00E-22
UVMTFDDX1ZNF1810.8388306172.69E-22
UVMTFDDX1ZNF6580.8391333082.51E-22
UVMTFDDX1ZNF4200.8406468081.79E-22
UVMTFDDX1ZNF4510.8411348881.61E-22
UVMTFDDX1ELF20.8414052461.51E-22
UVMTFDDX1ZNF280.841866711.36E-22
UVMTFDDX1THAP50.8422683251.24E-22
UVMTFDDX1ZNF1310.8442967067.81E-23
UVMTFDDX1ZNF1400.8454039296.05E-23
UVMTFDDX1TCF120.8470904954.08E-23
UVMTFDDX1ZNF430.8493967772.36E-23
UVMTFDDX1CREB10.8510653121.58E-23
UVMTFDDX1TERF10.8517502791.34E-23
UVMTFDDX1SP30.8573823433.31E-24
UVMTFDDX1YY10.8574626793.24E-24
UVMTFDDX1PURB0.8578033272.97E-24
UVMTFDDX1ATF20.8585354742.46E-24
UVMTFDDX1PRDM100.8624992928.80E-25
UVMTFDDX1ZNF1360.8642247715.57E-25
UVMTFDDX1IKZF50.8685718671.70E-25
UVMTFDDX1AEBP20.8743467453.31E-26
UVMTFDDX1ZBTB60.8763864491.82E-26
UVMTFDDX1ZBTB10.8766468791.69E-26
UVMTFDDX1PRMT30.883912361.82E-27
UVMTFDDX1CEBPZ0.8998437047.86E-30
UVMTSGDDX1RBBP80.8017008954.12E-19
UVMTSGDDX1DMTF10.8046659892.43E-19
UVMTSGDDX1CCAR10.806536191.74E-19
UVMTSGDDX1NEDD40.8085535291.20E-19
UVMTSGDDX1HIF1A0.8086999821.17E-19
UVMTSGDDX1PTPN120.8124375615.85E-20
UVMTSGDDX1APAF10.8129328215.33E-20
UVMTSGDDX1VEZT0.8129547375.31E-20
UVMTSGDDX1PPP2R5C0.8135184514.77E-20
UVMTSGDDX1EZH20.8141140064.26E-20
UVMTSGDDX1EGLN10.817639252.17E-20
UVMTSGDDX1PTPN20.8185669811.81E-20
UVMTSGDDX1ANXA70.8187323911.75E-20
UVMTSGDDX1PAFAH1B10.8218211019.56E-21
UVMTSGDDX1WDR110.8225701498.23E-21
UVMTSGDDX1ARID20.824762925.30E-21
UVMTSGDDX1TOPORS0.8256809084.40E-21
UVMTSGDDX1SMAD40.8258169364.28E-21
UVMTSGDDX1FAM188A0.8264182843.78E-21
UVMTSGDDX1GORAB0.8264801673.74E-21
UVMTSGDDX1IFT880.8273875933.10E-21
UVMTSGDDX1BMPR20.8282666052.59E-21
UVMTSGDDX1PPM1A0.8307917731.53E-21
UVMTSGDDX1CUL50.8322059861.13E-21
UVMTSGDDX1PRKAA10.8335134738.57E-22
UVMTSGDDX1MAP2K40.835330365.80E-22
UVMTSGDDX1PDS5B0.8360513634.96E-22
UVMTSGDDX1NAPEPLD0.8370947263.94E-22
UVMTSGDDX1GTPBP40.8433734969.66E-23
UVMTSGDDX1KRIT10.8436990278.97E-23
UVMTSGDDX1DCLRE1A0.8472209163.95E-23
UVMTSGDDX1SIRT10.8513615831.47E-23
UVMTSGDDX1CDC730.8515487711.41E-23
UVMTSGDDX1LIN90.8536916178.32E-24
UVMTSGDDX1BMPR1A0.8607401421.40E-24
UVMTSGDDX1SUZ120.8622666959.36E-25
UVMTSGDDX1MLH30.8688478431.58E-25
UVMTSGDDX1INTS60.8720908486.34E-26
UVMTSGDDX1MSH20.8794469137.28E-27
UVMTSGDDX1CUL20.8832853572.22E-27
UVMTSGDDX1ATM0.8864304588.14E-28
UVMTSGDDX1GGNBP20.8892049823.28E-28
UVMTSGDDX1SMCHD10.8905094542.12E-28
UVMTSGDDX1RINT10.8958689533.32E-29


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Protein structure


check button Protein 3D structure
Visit iCn3D.


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Protein-Protein Interaction


check button Protein-protein interaction networks
* Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure

check buttonOverlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure
check button
* Edge colors based on TCGA cancer types.

check button* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P))
all structure
Cancer typeTranslation factorInteracting protein coding geneFCadj.pval
KICHDDX1ZBTB8OS1.095006459912880.000376403331756592
KICHDDX1TSEN22.287048215232320.000808119773864746
PRADDDX1FAM98B1.519917525273330.00155267706387314
KICHDDX1C2orf491.56331355323720.0027848482131958
CHOLDDX1C2orf49-2.239082494187960.00390625
THCADDX1HNRNPK-8.734225425633890.00797530353045887
ESCADDX1TSEN54-1.716852531850350.013671875
CHOLDDX1TSEN2-1.928971343050160.02734375
UCECDDX1HNRNPK1.645327445048640.03125
KIRPDDX1TSEN2-3.075358842783720.0341199110262096
BRCADDX1C2orf49-1.155406111322050.0413357896985729
BLCADDX1TSEN21.879561868680330.0445594787597656
KIRCDDX1FAM98B-1.947848404829091.05445960630784e-07
BRCADDX1ZBTB8OS-2.385581990951041.5232755696552e-10
LIHCDDX1TSEN2-1.050803125316882.16224521636684e-05
KIRCDDX1TSEN21.3638549743912.47047805243583e-11
BRCADDX1TSEN54-2.419188980385372.62119186103299e-18
COADDDX1TSEN542.446954487022883.27825546264649e-06
THCADDX1TSEN54-1.461885317894143.51403508280065e-06
LUADDDX1C14orf166-3.964299642993223.8171822568541e-09
LUSCDDX1FAM98A-8.420679624799548.03131069907519e-10
HNSCDDX1TSEN21.117685970301378.08119216344495e-06


check button Protein-protein interactors with this translation factor (BIOGRID-3.4.160)
PPI interactors with DDX1
CSTF2, HNRNPK, ATM, MRE11A, RAD50, NBN, SRRM2, MYC, Mapk13, HDAC5, PSMA3, NDRG1, HDGF, ARRB2, HNRNPA1, CUL3, CUL4B, CUL5, CUL2, CDK2, CUL1, COPS5, DCUN1D1, CAND1, NEDD8, APP, RTCB, HNRNPM, PPP1CA, EEF1A1, C14orf166, FAM98B, RNF168, RANBP9, GEMIN5, STRN, TMED9, HMCN1, PLOD3, C2orf49, SCARB2, XPO1, FGFR1OP2, SAP30BP, EIF2S1, MCCC1, RPA2, UBE2I, ALDH18A1, TPR, VASP, HEXIM1, KATNAL2, STRIP1, POP1, HAS1, HNRNPD, PLOD1, LSM14A, RBM4, RC3H1, RHOA, NUP133, HSPA1A, FN1, VCAM1, ITGA4, CTNNB1, HDAC6, NME7, YWHAQ, SH3RF2, ABCF1, NELFB, YBX3, DHX9, DYNC1H1, DYNC1I2, EDC4, EIF2B2, EIF2B3, FKBP3, FLII, LRRFIP1, EIF3K, HNRNPA2B1, HNRNPU, IGF2BP3, ILF2, KRT18, NMT1, PDCD6, POLR1C, QARS, RFC2, RFC4, RPL26L1, RPL27, YBX1, rev, RPA3, RPA1, WWOX, ZBTB1, Fbxl16, STAU1, HUWE1, FUS, CUL7, OBSL1, LUZP4, ESR1, RPS6KB2, MAEL, KIAA0368, PPP1R8, SHMT2, EIF4EBP1, FAM98A, PICALM, RAVER1, THUMPD1, TSTA3, NTRK1, SCARNA22, HNRNPH2, NPM1, RPL10, Eif3a, Rpl35, Myh10, Rrbp1, Fus, MCM2, SNW1, UXS1, ANKS6, RFX3, HDAC1, XYLT2, DLD, SDHA, TRIM25, G3BP1, BRCA1, CLEC14A, PCBP1, PPP6C, TMPO, HSPA8, DIMT1, TGFB1, TRIP4, YAF2, YAP1, EFTUD2, PIH1D1, TNIP2, CHD3, CHD4, ARIH1, RIOK1, RUNX1, DPF2, PPT1, HERC2, AGR2, RECQL4, CSNK1A1, WDR76, HIST1H4A, HIST1H2BB, HIST1H2AB, GRWD1, METTL14, KIAA1429, EIF4B, RC3H2, ATG16L1, ACTC1, PHB, RIF1, DISC1, NR2C2, UBQLN2, ZBTB10, HDAC2, ZFYVE21, KRAS, BMH2, BMH1, COMMD3, SNRNP70, Dppa3, ITFG1, BIRC3, LMBR1L, NFX1, WWP2, BRD7, TP53, MATR3, ERCC6, SOX2, UCP3, nsp14ab, PLEKHA4, RAD18, PRMT8, PTEN, MIRLET7A1, MIRLET7A2, MIRLET7A3, MIRLET7B, MIRLET7C, MIRLET7D, MIRLET7E, MIRLET7F1, MIRLET7F2, MIRLET7G, MIRLET7I, MIR98, MIR1-1, MIR1-2, MIR7-1, MIR7-2, MIR7-3, MIR9-1, MIR9-2, MIR9-3, MIR10B, MIR15A, MIR15B, MIR16-1, MIR16-2, MIR17, MIR18A, MIR18B, MIR19A, MIR19B1, MIR19B2, MIR20A, MIR20B, MIR21, MIR25, MIR29A, MIR29B1, MIR29B2, MIR29C, MIR31, MIR34A, MIR34B, MIR34C, MIR92A1, MIR92A2, MIR93, MIR106A, MIR106B, MIR107, MIR122, MIR128-1, MIR128-2, MIR138-1, MIR138-2, MIR140, MIR141, MIR143, MIR145, MIR155, MIR199A1, MIR199A2, MIR200A, MIR200B, MIR200C, MIR205, MIR206, MIR214, MIR221, MIR222, MIR363, MIR429, MIR451A, ZFP64, DBT, PLA2G4A, ATXN2, CPEB4, DAZL, FAM98C, FBXO42, LMAN1, C2orf44, DDX3X, FUBP3, FXR2, IGF2BP1, IGF2BP2, LARP4B, LSM12, MEX3B, NUFIP2, PUM1, R3HDM2, RBMS1, TDRD3, UBAP2L, USP10, YTHDF3, FXR1, CIT, AURKB, KIF14, KIF20A, KIF23, PRC1, SUMO2, NDN, NUPR1, CIC, BRD4, Apc2, GLI1, RBM39, FBP1, LGALS9, IFI16, EIF3F, CUL4A, RNF4, RIN3, KDF1, SPOP, ISG15, UFL1, DDRGK1, FGA, FGG, FGB, USP11, BTF3, EP300, FBXW7, EIF4ENIF1, Rbm14, E, M, ORF10, RCHY1, KLF4, ZEB1,


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Mutations


check button Clinically associated variants from ClinVar.
GeneChrPositionRefSeqVarSeqRefSeeqVarTypePathogenicDiseaseVarInfo
DDX1chr215760466ATsingle_nucleotide_variantBenignnot_providedSO:0001819|synonymous_variantSO:0001819|synonymous_variant
DDX1chr215769797TCsingle_nucleotide_variantBenignnot_providedSO:0001819|synonymous_variantSO:0001819|synonymous_variant


check button nsSNVs with sample frequency (size of circle) from TCGA 33 cancers.
all structure


check button SNVs and Indels
GeneCancer typeChromosomeStartEndRefSeeqMutSeqMutation typeAAchange# samples
DDX1UCECchr21576036515760365GAMissense_Mutationp.D414N4
DDX1BLCAchr21575838715758387GCMissense_Mutationp.R400T4
DDX1COADchr21576894715768947CTMissense_Mutationp.A620V3
DDX1COADchr21574734115747341CTMissense_Mutationp.P287L3
DDX1LIHCchr21576880715768807GAMissense_Mutationp.R602Q3
DDX1UCECchr21574459415744594CTSilentp.L1962
DDX1SKCMchr21576973415769734CTSilentp.Y628Y2
DDX1STADchr21576038215760382CTSilentp.S419S2
DDX1CESCchr21573206515732065CTMissense_Mutation2
DDX1UCECchr21574629715746297CTSilentp.F2422
DDX1LIHCchr21573686915736869ATSilentp.T48T2
DDX1SKCMchr21573528815735288GASilentp.E12E2
DDX1STADchr21576977415769774AGMissense_Mutationp.R642G2
DDX1UCECchr21573687115736871GAMissense_Mutationp.G49E2
DDX1SKCMchr21576893815768938CTMissense_Mutationp.S617F2
DDX1STADchr21576045115760451CAMissense_Mutationp.H442Q2
DDX1UCECchr21574337615743376CTMissense_Mutationp.T151I2
DDX1UCECchr21576038215760382CTSilentp.S4192
DDX1LUADchr21574730915747309GCMissense_Mutationp.Q276H2
DDX1CESCchr21576977515769775GAMissense_Mutation2
DDX1KIRPchr21573561715735617CTSilentp.L24L2
DDX1STADchr21574609615746096TCSilentp.F216F2
DDX1SARCchr21576973315769733ACMissense_Mutation2
DDX1UCECchr21576972915769729TCMissense_Mutationp.W627R2
DDX1LUADchr21576036515760365GTMissense_Mutationp.D414Y2
DDX1LAMLchr21567481715674817AGSplice_Sitee15-22
DDX1STADchr21574274715742747TCMissense_Mutationp.L128S2
DDX1LUADchr21576048615760486GTMissense_Mutationp.R454I2
DDX1STADchr21576979315769793GTMissense_Mutationp.G648V2
DDX1LIHCchr21576360815763608G-Frame_Shift_Delp.R499fs2
DDX1ESCAchr21574635215746352GAMissense_Mutationp.A261T2
DDX1STADchr21574734115747341CTMissense_Mutation2
DDX1LIHCchr21573686915736869ATSilent2
DDX1STADchr21577100615771006TCSilentp.P733P2
DDX1SARCchr21576973315769733ACMissense_Mutationp.Y628S2
DDX1BLCAchr21575838715758387GCMissense_Mutation2
DDX1ESCAchr21573528215735282GTMissense_Mutationp.M10I2
DDX1LUADchr21574271615742716GTNonsense_Mutationp.E118*2
DDX1STADchr21576356415763564GAMissense_Mutation2
DDX1BLCAchr21575340715753407GCSplice_Sitep.G339A2
DDX1STADchr21574335115743351GAMissense_Mutationp.G143R2
DDX1SKCMchr21576362715763627GASilentp.K505K2
DDX1BLCAchr21576896415768964GASplice_Site2
DDX1STADchr21577021315770213GAMissense_Mutation2
DDX1HNSCchr21576862015768620GTMissense_Mutationp.D580Y2
DDX1STADchr21574267415742674AGMissense_Mutationp.I104V2
DDX1LIHCchr21574397915743979A-Frame_Shift_Delp.K173fs2
DDX1SKCMchr21577098515770985CTSilentp.F726F2
DDX1STADchr21576356415763564GAMissense_Mutationp.M484I2
DDX1HNSCchr21575834515758345GAMissense_Mutationp.R386K2
DDX1SKCMchr21576358615763586CTSilentp.L492L2
DDX1LUSCchr21577016715770167GTSilentp.P675P2
DDX1STADchr21577021315770213GAMissense_Mutationp.G691S2
DDX1COADchr21576039915760399TCMissense_Mutationp.F425S1
DDX1LIHCchr21574637815746378AGSilentp.S269S1
DDX1PRADchr21574740515747405GASilentp.Q308Q1
DDX1UCECchr21574339115743391TCMissense_Mutationp.L156S1
DDX1LIHCchr21576365815763658A-Frame_Shift_Delp.K516fs1
DDX1BLCAchr21574272515742725GTMissense_Mutation1
DDX1ESCAchr21574275115742751GTMissense_Mutationp.M129I1
DDX1LUSCchr21574637715746377CTMissense_Mutationp.S269L1
DDX1HNSCchr21576041515760416-TFrame_Shift_Insp.K431fs1
DDX1COADchr21576863915768639AGMissense_Mutationp.Y586C1
DDX1PRADchr21577018715770187AGMissense_Mutationp.D682G1
DDX1UCECchr21574336315743363GTMissense_Mutationp.V147F1
DDX1LUADchr21577022415770224GTMissense_Mutationp.R694S1
DDX1BLCAchr21576123115761231AGMissense_Mutation1
DDX1ESCAchr21575736615757366AGSplice_Site.1
DDX1LUSCchr21575743515757435CGMissense_Mutationp.S362C1
DDX1CESCchr21574335115743351GTMissense_Mutation1
DDX1HNSCchr21577022215770222AGMissense_Mutationp.R694G1
DDX1PRADchr21575334715753347GTSplice_Site1
DDX1LUADchr21573528015735280ATMissense_Mutationp.M10L1
DDX1BLCAchr21576370415763704GTMissense_Mutation1
DDX1ESCAchr21576894215768942GTSilent1
DDX1CESCchr21576981315769813GAMissense_Mutation1
DDX1KIRCchr21575835815758358GCMissense_Mutationp.Q390H1
DDX1LUSCchr21576045015760450ATMissense_Mutationp.H442L1
DDX1READchr21574274315742743GTNonsense_Mutationp.G127X1
DDX1COADchr21576981215769812CTSilentp.N654N1
DDX1SKCMchr21576973515769735CGMissense_Mutationp.H629D1
DDX1BLCAchr21574400015744000GCMissense_Mutationp.D180H1
DDX1GBMchr21577015415770154CTMissense_Mutation1
DDX1LUSCchr21576042315760423GTMissense_Mutationp.G433V1
DDX1BLCAchr21574400015744000GCMissense_Mutation1
DDX1SKCMchr21573981715739817CTMissense_Mutationp.P95L1
DDX1BLCAchr21574609915746099ACMissense_Mutationp.E217D1
DDX1HNSCchr21576862015768620GTMissense_Mutation1
DDX1CESCchr21574396015743960CCSilent1
DDX1LUSCchr21577090215770902GTNonsense_Mutationp.G699*1
DDX1SARCchr21575338715753387GTMissense_Mutation1
DDX1BLCAchr21574609915746099ACMissense_Mutation1
DDX1COADchr21576366215763662TAMissense_Mutationp.I517N1
DDX1SKCMchr21576122515761225GAMissense_Mutationp.G478S1
DDX1BLCAchr21574629715746297CTSilentp.F242F1
DDX1HNSCchr21575834515758345GAMissense_Mutation1
DDX1CESCchr21574396015743960CTSilentp.G1661
DDX1LIHCchr21573983015739830AGSilent1
DDX1LUSCchr21576720615767206ATSilentp.S541S1
DDX1SARCchr21574395915743959GTMissense_Mutation1
DDX1BLCAchr21574629715746297CTSilent1
DDX1LUADchr21576880015768800GAMissense_Mutationp.V600I1
DDX1HNSCchr21573753815737538CTSilent1
DDX1CESCchr21576977515769775GAMissense_Mutationp.R642K1
DDX1MESOchr21577092615770926AGMissense_Mutation1
DDX1LIHCchr21574611515746115A-Frame_Shift_Delp.K223fs1
DDX1HNSCchr21576041515760416--Frame_Shift_Ins1
DDX1COADchr21573564815735648TCSilentp.L35L1
DDX1MESOchr21577092615770926AGMissense_Mutationp.I707V1
DDX1LIHCchr21575838215758382A-Frame_Shift_Delp.G398fs1
DDX1ESCAchr21575736615757366AGSplice_Sitee15-21
DDX1LUADchr21576721915767219CGMissense_Mutationp.H546D1
DDX1BLCAchr21574272515742725GTMissense_Mutationp.G121W1
DDX1COADchr21575335215753352CAMissense_Mutationp.L321I1
DDX1LIHCchr21575831015758310GTSilentp.G374G1
DDX1OVchr21576038315760383GAMissense_Mutationp.E420K1
DDX1BLCAchr21575340715753407GCMissense_Mutation1
DDX1ESCAchr21576894215768942GTSilentp.L6181
DDX1LUSCchr21577089815770898ATSplice_Sitep.G698_splice1
DDX1BLCAchr21576123115761231AGMissense_Mutationp.N480D1
DDX1COADchr21575336215753362TCMissense_Mutationp.I324T1
DDX1LIHCchr21573758315737583ACMissense_Mutationp.T83P1
DDX1OVchr21567083115670831GAMissense_Mutationp.R330Q1
DDX1THYMchr21575738315757383GTMissense_Mutationp.G345C1
DDX1LIHCchr21574399115743991A-Frame_Shift_Delp.K177fs1
DDX1BLCAchr21574736715747367CASilent1
DDX1ESCAchr21574635215746352GAMissense_Mutation1
DDX1BLCAchr21576370415763704GTMissense_Mutationp.G531V1
DDX1HNSCchr21573753815737538CTSilentp.L68L1

check buttonCopy number variation (CNV) of DDX1
* Click on the image to open the original image in a new window.
all structure

check buttonFusion gene breakpoints (product of the structural variants (SVs)) across DDX1
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


check button Fusion genes with this translation factor from FusionGDB2.0.
FusionGDB2 IDDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
97715N/AFN071721DDX1chr215746139-ANKS1Bchr1299975349+
95130HNSCTCGA-CV-5441-01ADDX1chr215736887+C3orf67chr358792182-
103062N/ABG473709DDX1chr215760492-RPL28chr1955897300+
75239N/ABG329765GABRB3chr1526790498-DDX1chr215768763+
75239BLCATCGA-G2-A2EFLAP3chr417583437+DDX1chr215746273+
75239BLCATCGA-G2-A2EF-01ALAP3chr417583437+DDX1chr215746274+
75239LUSCTCGA-85-6561NBASchr215467874-DDX1chr215735269+
75240N/ADA765942RNU6ATACchr9137029560-DDX1chr215731992+


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Prognostic Analysis


check button Kaplan-Meier plots with logrank tests of overall survival (OS)
all structure
Cancer typeTranslation factorCoefficentHazard ratioWald test pvalLikelihool ratio pvalLogrank test pval# samples


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Translation factor and Gender


check button Differential gene expression between female and male. (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
KIRPDDX10.0001061289675155740.003
LUADDDX10.01541220656542870.42
LIHCDDX10.03071875250918190.8
HNSCDDX10.0464794690393111

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Translation factor and Age


check button Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
KICHDDX10.009103932243220050.3

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Related Drugs


check button Drugs targeting genes involved in this translation factor.
(DrugBank Version 5.1.8 2021-05-08)
UniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases


check button Diseases associated with this translation factor.
(DisGeNet 4.0)
Disease IDDisease Name# PubMedsDisease source
C0014173Endometrial Hyperplasia1CTD_human
C0029231Organic Mental Disorders, Substance-Induced1CTD_human
C0038580Substance Dependence1CTD_human
C0349578Complex Endometrial Hyperplasia1CTD_human
C0349579Atypical Endometrial Hyperplasia1CTD_human
C0456483Simple Endometrial Hyperplasia1CTD_human
C0740858Substance abuse problem1CTD_human