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Center for Computational Systems Medicine
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Gene Summary

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Translation studies in PubMed

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Exon Skipping Events

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Expression

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Expression Regulation

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Associated Genes

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Protein 3D Structure

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Protein-Protein Interaction

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Mutations

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Prognostic Analysis

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Gender Association

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Age Association

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Related Drugs

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Related Diseases

Translation Factor: EIF4A2 (NCBI Gene ID:1974)


Gene Summary

check button Gene Summary
Gene InformationGene Name: EIF4A2
Gene ID: 1974
Gene Symbol

EIF4A2

Gene ID

1974

Gene Nameeukaryotic translation initiation factor 4A2
SynonymsBM-010|DDX2B|EIF4A|EIF4F|eIF-4A-II|eIF4A-II
Cytomap

3q27.3

Type of Geneprotein-coding
Descriptioneukaryotic initiation factor 4A-IIATP-dependent RNA helicase eIF4A-2
Modification date20200322
UniProtAcc

Q14240


check button Child GO biological process term(s) under GO:0006412
GO IDGO term
GO:0006417Regulation of translation
GO:0008135Translation factor activity, RNA binding
GO:0002181Cytoplasmic translation
GO:0006413Translational initiation
GO:0006412Translation


check button Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneEIF4A2

GO:1900260

negative regulation of RNA-directed 5'-3' RNA polymerase activity

11922617



check button Inferred gene age of translation factor.
GeneInferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25
EIF4A2>1119.25


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Translation Studies in PubMed

check button We searched PubMed using 'EIF4A2[title] AND translation [title] AND human.'
GeneTitlePMID
EIF4A2eIF4A2 drives repression of translation at initiation by Ccr4-Not through purine-rich motifs in the 5'UTR31791371


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Exon Skipping Events

check buttonSkipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
For more annotations, please visit our ExonSkipDB.
all structure

check button Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ENSTExon skip start (DNA)Exon Skip end (DNA)ORF
ENST00000323963186502220186502266Frame-shift
ENST00000323963186502750186502890Frame-shift
ENST00000323963186504290186504434In-frame
ENST00000323963186505283186505373In-frame
ENST00000323963186505591186505671Frame-shift

check button Exon skipping position in the amino acid sequence.
ENSTExon skip start (DNA)Exon Skip end (DNA)Len(transcript seq)Exon skip start (mRNA)Exon Skip end (mRNA)Len(amino acid seq)Exon skip start (AA)Exon Skip end (AA)
ENST000003239631865042901865044341936692835407209257
ENST0000032396318650528318650537319369741063407303333

check button Potentially (partially) lost protein functional features of UniProt.
UniProtAccExon skip start (AA)Exon Skip end (AA)Function feature start (AA)Function feature end (AA)Functional feature typeFunctional feature desc.
Q142403033331407ChainID=PRO_0000054938;Note=Eukaryotic initiation factor 4A-II
Q142402092571407ChainID=PRO_0000054938;Note=Eukaryotic initiation factor 4A-II
Q1424020925764235DomainNote=Helicase ATP-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00541
Q14240303333246407DomainNote=Helicase C-terminal;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00542
Q14240209257246407DomainNote=Helicase C-terminal;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00542
Q14240209257212213Sequence conflictNote=LL->FA;Ontology_term=ECO:0000305;evidence=ECO:0000305
Q14240209257209213Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:3BOR
Q14240209257219228HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:3BOR
Q14240209257233235Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:3BOR


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Expression


check buttonGene expression level across TCGA pancancer
all structure

check buttonGene expression level across GTEx pantissue
all structure

check buttonExpression level of gene isoforms across TCGA pancancer
all structure

check buttonExpression level of gene isoforms across GTEx pantissue
all structure

check buttonCancer(tissue) type-specific expression level of Translation factor using z-score distriution
all structure

check buttonDifferential expression between tumor and matched normal (in the cancer types with more than 10 matched samples)
all structure
Cancer typeTranslation factorFCadj.pval
LUADEIF4A21.83597858364480.000162905479402723


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Expression Regulation


check buttonTranslation factor expression regulation through miRNA binding
Cancer typeGenemiRNATargetScan binding score (Context++ score percentile)CoefficientPvalue


check buttonTranslation factor expression regulation through methylation in the promoter of Translation factor
all structure
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a

check buttonTranslation factor expression regulation through methylation in the gene body of Translation factor (positive regulation)
all structure
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a
BLCAEIF4A2210.003687416062992170.2183016666666670.1006171638822590.4652570711407730.0814221626282553
ESCAEIF4A2210.02495267336404160.2659960526315790.1128881097560980.345333737807090.518620323173271

check buttonTranslation factor expression regulation through copy number variation of Translation factor
all structure
Cancer typeGeneCoefficientPvalue
BLCAEIF4A20.0618048760.023127758
PCPGEIF4A20.1889877680.031662627

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Associated Genes


check button Strongly correlated genes belong to cellular important gene groups with EIF4A2 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green)
all structure
Cancer typeGene groupTranslation factorCorrelated geneCoefficientPvalue
THYMCell metabolism geneEIF4A2PNPLA80.809462281.60E-29
THYMCell metabolism geneEIF4A2MCFD20.8097539341.47E-29
THYMCell metabolism geneEIF4A2RAPGEF40.8106745811.13E-29
THYMCell metabolism geneEIF4A2MUT0.8133236735.29E-30
THYMCell metabolism geneEIF4A2GBE10.8161266692.33E-30
THYMCell metabolism geneEIF4A2AUH0.8162834262.23E-30
THYMCell metabolism geneEIF4A2PPP2CB0.8165311852.07E-30
THYMCell metabolism geneEIF4A2TNPO10.8199881647.38E-31
THYMCell metabolism geneEIF4A2PIP5K1A0.8241412072.08E-31
THYMCell metabolism geneEIF4A2GALNT30.8253338641.43E-31
THYMCell metabolism geneEIF4A2PIGK0.8291623954.28E-32
THYMCell metabolism geneEIF4A2COL4A3BP0.8301886183.08E-32
THYMCell metabolism geneEIF4A2SEC31A0.8328966541.28E-32
THYMCell metabolism geneEIF4A2LMAN10.8378792022.43E-33
THYMCell metabolism geneEIF4A2TRMT110.8411617387.91E-34
THYMCell metabolism geneEIF4A2AASDHPPT0.842359725.21E-34
THYMCell metabolism geneEIF4A2SEC24D0.8457162451.59E-34
THYMCell metabolism geneEIF4A2PAPSS10.8593720279.38E-37
THYMCell metabolism geneEIF4A2PIK3R40.8671512363.93E-38
THYMCell metabolism geneEIF4A2PIK3C2A0.8728574463.37E-39
THYMCGCEIF4A2TET20.806482733.68E-29
THYMCGCEIF4A2BMPR1A0.8162201992.27E-30
THYMCGCEIF4A2LRIG30.8163586982.18E-30
THYMCGCEIF4A2GOLGA50.8188768061.03E-30
THYMCGCEIF4A2AFF40.8245618441.82E-31
THYMCGCEIF4A2MAPK10.8251837791.50E-31
THYMCGCEIF4A2KTN10.8269192268.72E-32
THYMCGCEIF4A2FBXO110.8325351651.44E-32
THYMCGCEIF4A2SBDS0.8382496552.15E-33
THYMCGCEIF4A2ARHGAP50.8388059971.78E-33
THYMCGCEIF4A2NFE2L20.8714822856.15E-39
THYMEpifactorEIF4A2ADNP0.8047784435.90E-29
THYMEpifactorEIF4A2DZIP30.8063510663.82E-29
THYMEpifactorEIF4A2TET20.806482733.68E-29
THYMEpifactorEIF4A2INO80D0.8142241884.07E-30
THYMEpifactorEIF4A2JMJD1C0.8183581761.20E-30
THYMEpifactorEIF4A2KDM3B0.8217618174.31E-31
THYMEpifactorEIF4A2ZMYND110.8430658324.07E-34
THYMIUPHAREIF4A2PTPRE0.8009494131.67E-28
THYMIUPHAREIF4A2SLC35A50.8047686355.92E-29
THYMIUPHAREIF4A2SLC30A50.8052868885.13E-29
THYMIUPHAREIF4A2SENP60.8057251944.54E-29
THYMIUPHAREIF4A2CSNK1G30.8066282133.54E-29
THYMIUPHAREIF4A2RAPGEF40.8106745811.13E-29
THYMIUPHAREIF4A2ATP6V1A0.8118515918.08E-30
THYMIUPHAREIF4A2BMPR1A0.8162201992.27E-30
THYMIUPHAREIF4A2NEK40.8178711061.39E-30
THYMIUPHAREIF4A2JMJD1C0.8183581761.20E-30
THYMIUPHAREIF4A2KDM3B0.8217618174.31E-31
THYMIUPHAREIF4A2PIP5K1A0.8241412072.08E-31
THYMIUPHAREIF4A2MAPK10.8251837791.50E-31
THYMIUPHAREIF4A2PREPL0.8269169248.72E-32
THYMIUPHAREIF4A2SLC25A360.8276518776.92E-32
THYMIUPHAREIF4A2SLC25A430.8300996783.17E-32
THYMIUPHAREIF4A2AHR0.8308181012.51E-32
THYMIUPHAREIF4A2FBXO110.8325351651.44E-32
THYMIUPHAREIF4A2ZMYND110.8430658324.07E-34
THYMIUPHAREIF4A2PKN20.8471043419.67E-35
THYMIUPHAREIF4A2SLC35F50.8492700634.40E-35
THYMIUPHAREIF4A2PDPK10.8537157338.38E-36
THYMIUPHAREIF4A2PIK3R40.8671512363.93E-38
THYMIUPHAREIF4A2NFE2L20.8714822856.15E-39
THYMIUPHAREIF4A2PIK3C2A0.8728574463.37E-39
THYMIUPHAREIF4A2MAP4K30.8938551251.27E-43
THYMKinaseEIF4A2CSNK1G30.8066282133.54E-29
THYMKinaseEIF4A2BMPR1A0.8162201992.27E-30
THYMKinaseEIF4A2NEK40.8178711061.39E-30
THYMKinaseEIF4A2MAPK10.8251837791.50E-31
THYMKinaseEIF4A2COL4A3BP0.8301886183.08E-32
THYMKinaseEIF4A2PKN20.8471043419.67E-35
THYMKinaseEIF4A2PDPK10.8537157338.38E-36
THYMKinaseEIF4A2PIK3R40.8671512363.93E-38
THYMKinaseEIF4A2MAP4K30.8938551251.27E-43
THYMTFEIF4A2ZBTB380.8027372731.03E-28
THYMTFEIF4A2NFXL10.803069.45E-29
THYMTFEIF4A2ZNF3040.8032533918.96E-29
THYMTFEIF4A2ZXDC0.8040497127.21E-29
THYMTFEIF4A2ADNP0.8047784435.90E-29
THYMTFEIF4A2ZNF6210.806467343.70E-29
THYMTFEIF4A2TET20.806482733.68E-29
THYMTFEIF4A2ZNF6640.8066410923.52E-29
THYMTFEIF4A2RREB10.8097849921.46E-29
THYMTFEIF4A2ZNF4320.8170931961.75E-30
THYMTFEIF4A2ZNF4400.8180901291.30E-30
THYMTFEIF4A2ZNF4410.8273030997.72E-32
THYMTFEIF4A2AHR0.8308181012.51E-32
THYMTFEIF4A2ZXDB0.8309519672.41E-32
THYMTFEIF4A2ZBTB430.8336383691.00E-32
THYMTFEIF4A2MEF2A0.8363330744.10E-33
THYMTFEIF4A2ZNF2740.8371162693.15E-33
THYMTFEIF4A2ZNF1360.8413747737.34E-34
THYMTFEIF4A2ZNF4200.8448508992.17E-34
THYMTFEIF4A2ZNF354B0.8456721171.62E-34
THYMTFEIF4A2ZNF1800.8619038573.41E-37
THYMTFEIF4A2NFE2L20.8714822856.15E-39
THYMTFEIF4A2BBX0.8722219054.45E-39
THYMTSGEIF4A2GORAB0.8023754641.14E-28
THYMTSGEIF4A2TET20.806482733.68E-29
THYMTSGEIF4A2BMPR1A0.8162201992.27E-30
THYMTSGEIF4A2LRIG30.8163586982.18E-30
THYMTSGEIF4A2PPP2CB0.8165311852.07E-30
THYMTSGEIF4A2KRIT10.8176190531.50E-30
THYMTSGEIF4A2KDM3B0.8217618174.31E-31
THYMTSGEIF4A2RCHY10.8257001721.28E-31
THYMTSGEIF4A2AHR0.8308181012.51E-32
THYMTSGEIF4A2DNAJB40.8418196036.29E-34
THYMTSGEIF4A2ZMYND110.8430658324.07E-34
UCSCell metabolism geneEIF4A2PNPLA80.809462281.60E-29
UCSCell metabolism geneEIF4A2MCFD20.8097539341.47E-29
UCSCell metabolism geneEIF4A2RAPGEF40.8106745811.13E-29
UCSCell metabolism geneEIF4A2MUT0.8133236735.29E-30
UCSCell metabolism geneEIF4A2GBE10.8161266692.33E-30
UCSCell metabolism geneEIF4A2AUH0.8162834262.23E-30
UCSCell metabolism geneEIF4A2PPP2CB0.8165311852.07E-30
UCSCell metabolism geneEIF4A2TNPO10.8199881647.38E-31
UCSCell metabolism geneEIF4A2PIP5K1A0.8241412072.08E-31
UCSCell metabolism geneEIF4A2GALNT30.8253338641.43E-31
UCSCell metabolism geneEIF4A2PIGK0.8291623954.28E-32
UCSCell metabolism geneEIF4A2COL4A3BP0.8301886183.08E-32
UCSCell metabolism geneEIF4A2SEC31A0.8328966541.28E-32
UCSCell metabolism geneEIF4A2LMAN10.8378792022.43E-33
UCSCell metabolism geneEIF4A2TRMT110.8411617387.91E-34
UCSCell metabolism geneEIF4A2AASDHPPT0.842359725.21E-34
UCSCell metabolism geneEIF4A2SEC24D0.8457162451.59E-34
UCSCell metabolism geneEIF4A2PAPSS10.8593720279.38E-37
UCSCell metabolism geneEIF4A2PIK3R40.8671512363.93E-38
UCSCell metabolism geneEIF4A2PIK3C2A0.8728574463.37E-39
UCSCGCEIF4A2TET20.806482733.68E-29
UCSCGCEIF4A2BMPR1A0.8162201992.27E-30
UCSCGCEIF4A2LRIG30.8163586982.18E-30
UCSCGCEIF4A2GOLGA50.8188768061.03E-30
UCSCGCEIF4A2AFF40.8245618441.82E-31
UCSCGCEIF4A2MAPK10.8251837791.50E-31
UCSCGCEIF4A2KTN10.8269192268.72E-32
UCSCGCEIF4A2FBXO110.8325351651.44E-32
UCSCGCEIF4A2SBDS0.8382496552.15E-33
UCSCGCEIF4A2ARHGAP50.8388059971.78E-33
UCSCGCEIF4A2NFE2L20.8714822856.15E-39
UCSEpifactorEIF4A2ADNP0.8047784435.90E-29
UCSEpifactorEIF4A2DZIP30.8063510663.82E-29
UCSEpifactorEIF4A2TET20.806482733.68E-29
UCSEpifactorEIF4A2INO80D0.8142241884.07E-30
UCSEpifactorEIF4A2JMJD1C0.8183581761.20E-30
UCSEpifactorEIF4A2KDM3B0.8217618174.31E-31
UCSEpifactorEIF4A2ZMYND110.8430658324.07E-34
UCSIUPHAREIF4A2PTPRE0.8009494131.67E-28
UCSIUPHAREIF4A2SLC35A50.8047686355.92E-29
UCSIUPHAREIF4A2SLC30A50.8052868885.13E-29
UCSIUPHAREIF4A2SENP60.8057251944.54E-29
UCSIUPHAREIF4A2CSNK1G30.8066282133.54E-29
UCSIUPHAREIF4A2RAPGEF40.8106745811.13E-29
UCSIUPHAREIF4A2ATP6V1A0.8118515918.08E-30
UCSIUPHAREIF4A2BMPR1A0.8162201992.27E-30
UCSIUPHAREIF4A2NEK40.8178711061.39E-30
UCSIUPHAREIF4A2JMJD1C0.8183581761.20E-30
UCSIUPHAREIF4A2KDM3B0.8217618174.31E-31
UCSIUPHAREIF4A2PIP5K1A0.8241412072.08E-31
UCSIUPHAREIF4A2MAPK10.8251837791.50E-31
UCSIUPHAREIF4A2PREPL0.8269169248.72E-32
UCSIUPHAREIF4A2SLC25A360.8276518776.92E-32
UCSIUPHAREIF4A2SLC25A430.8300996783.17E-32
UCSIUPHAREIF4A2AHR0.8308181012.51E-32
UCSIUPHAREIF4A2FBXO110.8325351651.44E-32
UCSIUPHAREIF4A2ZMYND110.8430658324.07E-34
UCSIUPHAREIF4A2PKN20.8471043419.67E-35
UCSIUPHAREIF4A2SLC35F50.8492700634.40E-35
UCSIUPHAREIF4A2PDPK10.8537157338.38E-36
UCSIUPHAREIF4A2PIK3R40.8671512363.93E-38
UCSIUPHAREIF4A2NFE2L20.8714822856.15E-39
UCSIUPHAREIF4A2PIK3C2A0.8728574463.37E-39
UCSIUPHAREIF4A2MAP4K30.8938551251.27E-43
UCSKinaseEIF4A2CSNK1G30.8066282133.54E-29
UCSKinaseEIF4A2BMPR1A0.8162201992.27E-30
UCSKinaseEIF4A2NEK40.8178711061.39E-30
UCSKinaseEIF4A2MAPK10.8251837791.50E-31
UCSKinaseEIF4A2COL4A3BP0.8301886183.08E-32
UCSKinaseEIF4A2PKN20.8471043419.67E-35
UCSKinaseEIF4A2PDPK10.8537157338.38E-36
UCSKinaseEIF4A2PIK3R40.8671512363.93E-38
UCSKinaseEIF4A2MAP4K30.8938551251.27E-43
UCSTFEIF4A2ZBTB380.8027372731.03E-28
UCSTFEIF4A2NFXL10.803069.45E-29
UCSTFEIF4A2ZNF3040.8032533918.96E-29
UCSTFEIF4A2ZXDC0.8040497127.21E-29
UCSTFEIF4A2ADNP0.8047784435.90E-29
UCSTFEIF4A2ZNF6210.806467343.70E-29
UCSTFEIF4A2TET20.806482733.68E-29
UCSTFEIF4A2ZNF6640.8066410923.52E-29
UCSTFEIF4A2RREB10.8097849921.46E-29
UCSTFEIF4A2ZNF4320.8170931961.75E-30
UCSTFEIF4A2ZNF4400.8180901291.30E-30
UCSTFEIF4A2ZNF4410.8273030997.72E-32
UCSTFEIF4A2AHR0.8308181012.51E-32
UCSTFEIF4A2ZXDB0.8309519672.41E-32
UCSTFEIF4A2ZBTB430.8336383691.00E-32
UCSTFEIF4A2MEF2A0.8363330744.10E-33
UCSTFEIF4A2ZNF2740.8371162693.15E-33
UCSTFEIF4A2ZNF1360.8413747737.34E-34
UCSTFEIF4A2ZNF4200.8448508992.17E-34
UCSTFEIF4A2ZNF354B0.8456721171.62E-34
UCSTFEIF4A2ZNF1800.8619038573.41E-37
UCSTFEIF4A2NFE2L20.8714822856.15E-39
UCSTFEIF4A2BBX0.8722219054.45E-39
UCSTSGEIF4A2GORAB0.8023754641.14E-28
UCSTSGEIF4A2TET20.806482733.68E-29
UCSTSGEIF4A2BMPR1A0.8162201992.27E-30
UCSTSGEIF4A2LRIG30.8163586982.18E-30
UCSTSGEIF4A2PPP2CB0.8165311852.07E-30
UCSTSGEIF4A2KRIT10.8176190531.50E-30
UCSTSGEIF4A2KDM3B0.8217618174.31E-31
UCSTSGEIF4A2RCHY10.8257001721.28E-31
UCSTSGEIF4A2AHR0.8308181012.51E-32
UCSTSGEIF4A2DNAJB40.8418196036.29E-34
UCSTSGEIF4A2ZMYND110.8430658324.07E-34
UVMCell metabolism geneEIF4A2TOMM70A0.8347313246.60E-22
UVMCell metabolism geneEIF4A2PIK3R40.8393129232.42E-22
UVMCGCEIF4A2MLF10.800565815.03E-19
UVMCGCEIF4A2RAF10.8535660588.58E-24
UVMEpifactorEIF4A2SATB10.8022012333.77E-19
UVMEpifactorEIF4A2RYBP0.8041555872.66E-19
UVMEpifactorEIF4A2MSL20.8081431611.30E-19
UVMEpifactorEIF4A2UBE2E10.8086023821.19E-19
UVMEpifactorEIF4A2SETMAR0.8251224784.93E-21
UVMEpifactorEIF4A2SETD50.8358901945.13E-22
UVMIUPHAREIF4A2NEK110.8152514953.43E-20
UVMIUPHAREIF4A2ATP2C10.8220373519.15E-21
UVMIUPHAREIF4A2PIK3R40.8393129232.42E-22
UVMIUPHAREIF4A2RAF10.8535660588.58E-24
UVMKinaseEIF4A2NEK110.8152514953.43E-20
UVMKinaseEIF4A2PIK3R40.8393129232.42E-22
UVMKinaseEIF4A2RAF10.8535660588.58E-24
UVMTFEIF4A2SATB10.8022012333.77E-19
UVMTFEIF4A2ZNF6670.8114881796.98E-20
UVMTFEIF4A2ZNF3910.8161817712.87E-20
UVMTFEIF4A2ZNF4150.820845251.16E-20
UVMTFEIF4A2ZNF1970.8386202522.82E-22
UVMTSGEIF4A2WDR480.8142806814.13E-20
UVMTSGEIF4A2MTUS10.8591462372.11E-24


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Protein structure


check button Protein 3D structure
Visit iCn3D.


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Protein-Protein Interaction


check button Protein-protein interaction networks
* Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure

check buttonOverlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure
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* Edge colors based on TCGA cancer types.

check button* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P))
all structure
Cancer typeTranslation factorInteracting protein coding geneFCadj.pval
HNSCEIF4A2EIF1-4.133994382109090.000228392819053625
LUADEIF4A2PDCD41.159318238269930.00162636946590219
BRCAEIF4A2EIF4G21.338019118817420.0018433651637361
BRCAEIF4A2EIF4G31.342068077618480.00309822300858815
CHOLEIF4A2PABPC1-4.562725288153530.00390625
STADEIF4A2EIF4G2-4.309025593011670.0050255935639143
KICHEIF4A2EIF4G1-1.466560811507430.00612920522689819
PRADEIF4A2EIF11.328226489913530.00674237731133815
BLCAEIF4A2PABPC11.314853027927460.0180816650390625
READEIF4A2PDCD4-3.133286761293120.03125
ESCAEIF4A2EIF4A1-1.245380731992850.0419921875
HNSCEIF4A2PDCD4-6.918249222909571.13186615635641e-09
THCAEIF4A2EIF4G3-1.003616162250161.40000643717562e-05
LUADEIF4A2EIF4G3-4.218798858844052.22325471114907e-07
BRCAEIF4A2EIF4B-2.160327420296962.35556737304054e-22
LIHCEIF4A2PABPC1-1.720769613621882.98009622125841e-06
LUSCEIF4A2EIF4G3-4.436344738151093.64325144746635e-05
KICHEIF4A2EIF4E1.616752105626716.55651092529297e-06
KIRCEIF4A2EIF4B1.149971405104747.59366366705366e-09
KICHEIF4A2EIF4A11.144855833095718.16583633422851e-06
PRADEIF4A2PABPC1-2.102003183634768.55379952759014e-07
COADEIF4A2PDCD4-5.140915683520058.94069671630861e-08


check button Protein-protein interactors with this translation factor (BIOGRID-3.4.160)
PPI interactors with EIF4A2
EIF4G1, EIF3A, PDCD4, P4HB, EIF3L, EIF3D, EIF3H, MYO1B, EIF3M, PABPC1, EIF3K, EIF4G3, DDX3X, EIF4G2, EIF4E, CD2BP2, SPAG9, AKAP17A, ATRX, VAC14, ALPI, PTPRS, RPS29, TPM3, CMBL, EIF3F, RPAP2, CD4, Eif3a, NEK2, TK1, PFDN1, EIF4A1, DDX39B, BRCA1, ECT2, VCP, CD81, BAG3, EIF4A2, MDFI, IPO11, DPPA4, TRIM36, TRIM39, SSX2IP, PIH1D2, SLC16A9, HNRNPA1, HSPB1, UNK, AIMP1, CETN2, RPSA, EIF4A3, LAGE3, HSPB2, GOLGA2, CRY1, CRY2, MCM2, CDC5L, DUSP28, CYLD, TRIM25, MCPH1, FBXO7, TMPO, HEXIM1, RUNX1, SUZ12, NR2C2, AGRN, APEX1, ITFG1, TRIM28, PPIA, TEX101, ZNF620, LINC01554, SH3GL3, MN1, CDCA5, ATXN2, EIF3B, EIF3C, EIF3E, EIF3G, EIF3I, EIF4B, PABPC4, PRRC2A, PRRC2B, PRRC2C, TDRD3, TOP3B, UPF1, USP10, IBTK, YTHDF2, SMG1, CIT, ANLN, CHMP4C, KIF14, KIF20A, KIF23, PRC1, PRNP, SUMO2, NUPR1, EIF4EBP2, EIF4ENIF1, EIF4EBP1, ANGEL1, SPOP, DDRGK1, TUBB, TRIM37, SPRTN, CCNF, HECTD1, OPTN,


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Mutations


check button Clinically associated variants from ClinVar.
GeneChrPositionRefSeqVarSeqRefSeeqVarTypePathogenicDiseaseVarInfo


check button nsSNVs with sample frequency (size of circle) from TCGA 33 cancers.
all structure


check button SNVs and Indels
GeneCancer typeChromosomeStartEndRefSeeqMutSeqMutation typeAAchange# samples
EIF4A2LUADchr3186505350186505350GTMissense_Mutationp.V326F7
EIF4A2BRCAchr3186502374186502374GAMissense_Mutationp.D33N4
EIF4A2BRCAchr3186505647186505647CGMissense_Mutationp.T352S3
EIF4A2LIHCchr3186504304186504304CTMissense_Mutationp.S214F3
EIF4A2UCECchr3186505598186505598GTMissense_Mutationp.G336W3
EIF4A2KIRPchr3186503770186503770GTMissense_Mutationp.Q149H3
EIF4A2PAADchr3186505616186505616GAMissense_Mutationp.V342M3
EIF4A2BRCAchr3186503952186503952GASplice_Sitee6-13
EIF4A2ESCAchr3186504993186504993GTMissense_Mutationp.R283S3
EIF4A2BRCAchr3186504030186504030GCMissense_Mutationp.E199Q3
EIF4A2BRCAchr3186504350186504351GA-Frame_Shift_Delp.D231fs3
EIF4A2LUADchr3186502264186502264GCMissense_Mutationp.E25Q2
EIF4A2SARCchr3186506919186506919GAMissense_Mutation2
EIF4A2SKCMchr3186505599186505599GAMissense_Mutationp.G336E2
EIF4A2CESCchr3186503991186503991GTMissense_Mutation2
EIF4A2KIRCchr3186504360186504360ACMissense_Mutationp.I233L2
EIF4A2BLCAchr3186504931186504932AC-Frame_Shift_Delp.T263fs2
EIF4A2KIRCchr3186505363186505363CTMissense_Mutationp.T330I2
EIF4A2LIHCchr3186503676186503676A-Frame_Shift_Delp.Q118fs2
EIF4A2CESCchr3186504951186504951GASilent2
EIF4A2UCECchr3186503752186503752TCNonstop_Mutationp.*98R2
EIF4A2CESCchr3186505011186505011GCSilent2
EIF4A2UCECchr3186503753186503753GTNonsense_Mutationp.E144*2
EIF4A2STADchr3186502807186502807AGMissense_Mutationp.I89V2
EIF4A2CESCchr3186502437186502437GCMissense_Mutation2
EIF4A2UCECchr3186504412186504412TGMissense_Mutationp.F250C2
EIF4A2BRCAchr3186507018186507018CTMissense_Mutationp.T395I2
EIF4A2STADchr3186504931186504931AGMissense_Mutationp.T263A2
EIF4A2CESCchr3186503748186503748GCMissense_Mutation2
EIF4A2BLCAchr3186501413186501413CTMissense_Mutationp.S5F2
EIF4A2PAADchr3186505616186505616GAMissense_Mutation2
EIF4A2UCECchr3186502819186502819CTNonsense_Mutationp.Q93*2
EIF4A2UCECchr3186504995186504995GAMissense_Mutationp.R284H2
EIF4A2SKCMchr3186502263186502263CTSilentp.I24I2
EIF4A2STADchr3186505288186505288GAMissense_Mutationp.G305D2
EIF4A2ESCAchr3186507053186507053AGMissense_Mutation2
EIF4A2UCECchr3186505341186505341TCMissense_Mutationp.S323P2
EIF4A2LGGchr3186501406186501406GTMissense_Mutationp.G3C2
EIF4A2STADchr3186504980186504980TCMissense_Mutationp.F279S2
EIF4A2PAADchr3186503747186503747CASilentp.R142R2
EIF4A2UCECchr3186505363186505368CTGACT-In_Frame_Delp.TDL330in_frame_delM2
EIF4A2SKCMchr3186504350186504350GAMissense_Mutationp.M229I2
EIF4A2LUADchr3186503788186503788TCSilentp.I155I2
EIF4A2STADchr3186504345186504345TAMissense_Mutationp.F228I2
EIF4A2BLCAchr3186503747186503747CASilent2
EIF4A2BLCAchr3186505329186505329TGMissense_Mutationp.F319V2
EIF4A2SARCchr3186504939186504939TGMissense_Mutation2
EIF4A2UCECchr3186506991186506991GAMissense_Mutationp.R386H2
EIF4A2LIHCchr3186504304186504304CTMissense_Mutation2
EIF4A2SKCMchr3186502861186502861TCSilentp.L107L2
EIF4A2STADchr3186503790186503790TAMissense_Mutationp.V156D2
EIF4A2ESCAchr3186507053186507053AGMissense_Mutationp.I407V2
EIF4A2HNSCchr3186504984186504984CGSilentp.L280L2
EIF4A2SARCchr3186502839186502839CTSilent2
EIF4A2LIHCchr3186502251186502271CGATGGTGTCATCGAGGTAAG-Splice_Site1
EIF4A2SKCMchr3186501362186501362CTSplice_Site.1
EIF4A2BLCAchr3186507037186507037GAMissense_Mutation1
EIF4A2BLCAchr3186502252186502252GAMissense_Mutation1
EIF4A2CHOLchr3186504030186504030GTNonsense_Mutationp.E199X1
EIF4A2THYMchr3186501279186501279CTMissense_Mutation1
EIF4A2BLCAchr3186502252186502252GAMissense_Mutationp.D21N1
EIF4A2ESCAchr3186503674186503674CTSilentp.I117I1
EIF4A2KIRCchr3186505633186505633TGMissense_Mutationp.N347K1
EIF4A2LIHCchr3186502787186502787GCMissense_Mutationp.G82A1
EIF4A2BLCAchr3186501413186501413CTMissense_Mutation1
EIF4A2BLCAchr3186502264186502264GAMissense_Mutation1
EIF4A2COADchr3186502466186502468TAT-In_Frame_Delp.63_64del1
EIF4A2LUADchr3186504304186504304CGMissense_Mutationp.S214C1
EIF4A2THYMchr3186504396186504396GTNonsense_Mutationp.E245X1
EIF4A2BLCAchr3186505012186505012AGMissense_Mutationp.T290A1
EIF4A2HNSCchr3186501414186501414CASilent1
EIF4A2SARCchr3186504939186504939TGMissense_Mutationp.C265W1
EIF4A2SKCMchr3186504002186504002GASilentp.L189L1
EIF4A2BLCAchr3186504931186504932AC-Frame_Shift_Del1
EIF4A2CESCchr3186502788186502798CAAGACAGCCA-Frame_Shift_Del1
EIF4A2BLCAchr3186502365186502365GAMissense_Mutation1
EIF4A2DLBCchr3186502355186502355CGMissense_Mutationp.S26R1
EIF4A2LUSCchr3186503789186503789GAMissense_Mutationp.V156I1
EIF4A2HNSCchr3186502849186502849CAMissense_Mutation1
EIF4A2SARCchr3186502839186502839CTSilentp.F99F1
EIF4A2SKCMchr3186504015186504015A-Frame_Shift_Delp.K194fs1
EIF4A2BLCAchr3186502795186502795GTMissense_Mutation1
EIF4A2BLCAchr3186505012186505012AGMissense_Mutation1
EIF4A2DLBCchr3186502430186502430CTSilentp.Y51Y1
EIF4A2LUSCchr3186504960186504960CASilentp.T272T1
EIF4A2UCECchr3186503752186503752TCSilentp.N143N1
EIF4A2BLCAchr3186503971186503974TGTT-Frame_Shift_Delp.MF179fs1
EIF4A2HNSCchr3186504984186504984CGSilent1
EIF4A2KIRPchr3186505347186505348-AFrame_Shift_Insp.R325fs1
EIF4A2SARCchr3186502839186502839CTSilentp.F1001
EIF4A2LIHCchr3186504339186504339A-Frame_Shift_Delp.K227fs1
EIF4A2SKCMchr3186507006186507007TC-Frame_Shift_Delp.F391fs1
EIF4A2BLCAchr3186503736186503736GAMissense_Mutation1
EIF4A2BLCAchr3186506969186506969GTNonsense_Mutationp.E379*1
EIF4A2ESCAchr3186507053186507053AGMissense_Mutationp.I408V1
EIF4A2OVchr3187984101187984101GTMissense_Mutation1
EIF4A2UCECchr3186504998186504998AGMissense_Mutationp.K285R1
EIF4A2BLCAchr3186503971186503974TGTT-Frame_Shift_Delp.M179fs1
EIF4A2HNSCchr3186501400186501421ATGTCTGGTGGCTCCGCGGATT-Frame_Shift_Del1
EIF4A2KIRPchr3186504962186504962TCMissense_Mutationp.I273T1
EIF4A2SARCchr3186504939186504939TGMissense_Mutationp.C266W1
EIF4A2LUADchr3186505046186505046CTMissense_Mutationp.S301F1
EIF4A2BLCAchr3186502228186502228GCMissense_Mutation1
EIF4A2BLCAchr3186507037186507037GAMissense_Mutationp.M401I1
EIF4A2ESCAchr3186503674186503674CTMissense_Mutationp.P72S1
EIF4A2OVchr3187988016187988016GCMissense_Mutation1
EIF4A2UCECchr3186505363186505368CTGACT-In_Frame_Delp.330_332TDL>M1
EIF4A2HNSCchr3186504028186504028ATMissense_Mutation1
EIF4A2SARCchr3186506919186506919GAMissense_Mutationp.G363D1
EIF4A2BLCAchr3186501375186501375CTMissense_Mutation1
EIF4A2ESCAchr3186504993186504993GTMissense_Mutationp.R284S1
EIF4A2HNSCchr3186505353186505353CGMissense_Mutation1
EIF4A2KIRPchr3186503770186503770GTMissense_Mutation1
EIF4A2LUADchr3186506920186506920CTSilentp.G362G1
EIF4A2BLCAchr3186503971186503974TGTT-Frame_Shift_Del1
EIF4A2CESCchr3186502834186502834GTNonsense_Mutation1
EIF4A2BLCAchr3186502795186502795GTMissense_Mutationp.A85S1
EIF4A2HNSCchr3186505353186505353CGMissense_Mutationp.L327V1
EIF4A2SKCMchr3186504015186504015A-Frame_Shift_Delp.F193fs1
EIF4A2LUADchr3186502391186502391GTMissense_Mutationp.M38I1
EIF4A2BLCAchr3186505329186505329TGMissense_Mutation1
EIF4A2CESCchr3186502834186502834GTNonsense_Mutationp.E99*1
EIF4A2BLCAchr3186503736186503736GAMissense_Mutationp.G138E1
EIF4A2LGGchr3186501406186501406GTMissense_Mutation1
EIF4A2CESCchr3186502437186502437GCMissense_Mutationp.E55Q1
EIF4A2ESCAchr3186506930186506930CASilentp.R366R1
EIF4A2HNSCchr3186504028186504028ATMissense_Mutationp.Y198F1
EIF4A2BLCAchr3186503753186503753GAMissense_Mutation1
EIF4A2CESCchr3186505011186505011GCSilentp.L2901
EIF4A2LUADchr3186501404186501404CTMissense_Mutationp.S2F1
EIF4A2BLCAchr3186503753186503753GAMissense_Mutationp.E144K1

check buttonCopy number variation (CNV) of EIF4A2
* Click on the image to open the original image in a new window.
all structure

check buttonFusion gene breakpoints (product of the structural variants (SVs)) across EIF4A2
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


check button Fusion genes with this translation factor from FusionGDB2.0.
FusionGDB2 IDDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
99660N/ABF840289ACTR2chr265497286-EIF4A2chr3186506064+
99660N/AAI810008ATP6V1C2chr210923658+EIF4A2chr3186506831-
99660N/AFN161688C12orf42chr12103745137-EIF4A2chr3186507301-
99660THCATCGA-DJ-A3V6-01ACTSBchr811701564-EIF4A2chr3186501336+
99660N/ABF987336DLG5chr1079584177+EIF4A2chr3186502299-
87203STADTCGA-BR-8284-01AEIF4A2chr3186501428+AARSchr1670316687-
103286GBMTCGA-06-0238-01AEIF4A2chr3186502266+ACTR3chr2114691856+
87811N/AEY123259EIF4A2chr3186507553+ATG13chr1146650505-
89533OVTCGA-13-A5FT-01AEIF4A2chr3186502266+DNAJB11chr3186314843+
89533OVTCGA-13-A5FT-01AEIF4A2chr3186502302+DNAJB11chr3186314843+
99660N/AAA523672EIF4A2chr3186507529-EIF4A2chr3186507500+
99660N/AAA730953EIF4A2chr3186507443+EIF4A2chr3186507476-
99660N/AAW840050EIF4A2chr3186505963+EIF4A2chr3186505704-
99660N/ABG979271EIF4A2chr3186506486-EIF4A2chr3186506836+
95355BRCATCGA-AC-A2BK-01AEIF4A2chr3186502414+FAM149B1chr1074959593+
86127N/ABM773122EIF4A2chr3186506183+FUSchr1631202784+
89879STADTCGA-HU-A4GT-01AEIF4A2chr3186505373+HIF1Achr1462213652+
25949LUSCTCGA-34-5232EIF4A2chr3186502017+IGKCchr289161431-
98603LIHCTCGA-BC-A10Y-01AEIF4A2chr3186504062+KNG1chr3186461494+
103085N/ADA558800EIF4A2chr3186505539+LMNAchr1156084526+
94565STADTCGA-BR-8284-01AEIF4A2chr3186504434+NUP107chr1269109407+
93298N/ABM834299EIF4A2chr3186501436+PPDPFchr2062153365+
88868STADTCGA-CD-A4MH-01AEIF4A2chr3186505671+RBMX2chrX129545322+
97411N/ABF338517EIF4A2chr3186507655+RFC4chr3186507813+
25949N/ABF526915EIF4A2chr3186507686+RP11-114G22.1chr1223061142+
101048STADTCGA-CD-8530-01AEIF4A2chr3186505053+SMAD6chr1567004006+
84147STADTCGA-CD-A486-01AEIF4A2chr3186504062+SMG8chr1757292166+
25949N/AAW022230EIF4A2chr3186507686+SPANXA2-OT1chrX140593415-
92840N/ADA027118EIF4A2chr3186503752+TGFBIchr5135364680+
98632STADTCGA-EQ-8122-01AEIF4A2chr3186505373+VIMchr1017278293+
99660LUSCTCGA-21-1075-01AFGFR2chr10123243212-EIF4A2chr3186504916+
99660OVTCGA-61-1900HSP90AA1chr14102549370-EIF4A2chr3186504915+
99660N/ABQ355782KIAA1217chr1024833139-EIF4A2chr3186507348+
99660N/ACB048230PTENchr1089726688+EIF4A2chr3186507686-
99660Non-CancerTCGA-A7-A0D9-11ASORT1chr1109859471-EIF4A2chr3186504915+
99660OVTCGA-25-1312-01AST6GAL1chr3186769134+EIF4A2chr3186505284+
99669STADTCGA-HU-A4GN-01AXPO1chr261722590-EIF4A2chr3186504916+


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Prognostic Analysis


check button Kaplan-Meier plots with logrank tests of overall survival (OS)
all structure
Cancer typeTranslation factorCoefficentHazard ratioWald test pvalLikelihool ratio pvalLogrank test pval# samples


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Translation factor and Gender


check button Differential gene expression between female and male. (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
LIHCEIF4A20.001569073571541330.042
SARCEIF4A20.004517610877405950.12
PCPGEIF4A20.03540823678405790.89
HNSCEIF4A21.30974888314952e-083.7e-07

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Translation factor and Age


check button Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
LUSCEIF4A20.002230770276350970.069
LGGEIF4A20.03662937846770081
BRCAEIF4A20.01316475282697640.38
ESCAEIF4A20.007358270912313670.22
THYMEIF4A20.0006979526403710280.023
SARCEIF4A20.001136449826414270.036

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Related Drugs


check button Drugs targeting genes involved in this translation factor.
(DrugBank Version 5.1.8 2021-05-08)
UniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases


check button Diseases associated with this translation factor.
(DisGeNet 4.0)
Disease IDDisease Name# PubMedsDisease source
C0001969Alcoholic Intoxication1PSYGENET
C0394996Acute alcoholic intoxication1PSYGENET