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Translation Factor: EIF4A2 (NCBI Gene ID:1974) |
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Gene Summary |
Gene Information | Gene Name: EIF4A2 | Gene ID: 1974 | Gene Symbol | EIF4A2 | Gene ID | 1974 |
Gene Name | eukaryotic translation initiation factor 4A2 | |
Synonyms | BM-010|DDX2B|EIF4A|EIF4F|eIF-4A-II|eIF4A-II | |
Cytomap | 3q27.3 | |
Type of Gene | protein-coding | |
Description | eukaryotic initiation factor 4A-IIATP-dependent RNA helicase eIF4A-2 | |
Modification date | 20200322 | |
UniProtAcc | Q14240 |
Child GO biological process term(s) under GO:0006412 |
GO ID | GO term |
GO:0006417 | Regulation of translation |
GO:0008135 | Translation factor activity, RNA binding |
GO:0002181 | Cytoplasmic translation |
GO:0006413 | Translational initiation |
GO:0006412 | Translation |
Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | EIF4A2 | GO:1900260 | negative regulation of RNA-directed 5'-3' RNA polymerase activity | 11922617 |
Inferred gene age of translation factor. |
Gene | Inferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25 |
EIF4A2 | >1119.25 |
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We searched PubMed using 'EIF4A2[title] AND translation [title] AND human.' |
Gene | Title | PMID |
EIF4A2 | eIF4A2 drives repression of translation at initiation by Ccr4-Not through purine-rich motifs in the 5'UTR | 31791371 |
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Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. For more annotations, please visit our ExonSkipDB. |
Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ENST | Exon skip start (DNA) | Exon Skip end (DNA) | ORF |
ENST00000323963 | 186502220 | 186502266 | Frame-shift |
ENST00000323963 | 186502750 | 186502890 | Frame-shift |
ENST00000323963 | 186504290 | 186504434 | In-frame |
ENST00000323963 | 186505283 | 186505373 | In-frame |
ENST00000323963 | 186505591 | 186505671 | Frame-shift |
Exon skipping position in the amino acid sequence. |
ENST | Exon skip start (DNA) | Exon Skip end (DNA) | Len(transcript seq) | Exon skip start (mRNA) | Exon Skip end (mRNA) | Len(amino acid seq) | Exon skip start (AA) | Exon Skip end (AA) |
ENST00000323963 | 186504290 | 186504434 | 1936 | 692 | 835 | 407 | 209 | 257 |
ENST00000323963 | 186505283 | 186505373 | 1936 | 974 | 1063 | 407 | 303 | 333 |
Potentially (partially) lost protein functional features of UniProt. |
UniProtAcc | Exon skip start (AA) | Exon Skip end (AA) | Function feature start (AA) | Function feature end (AA) | Functional feature type | Functional feature desc. |
Q14240 | 303 | 333 | 1 | 407 | Chain | ID=PRO_0000054938;Note=Eukaryotic initiation factor 4A-II |
Q14240 | 209 | 257 | 1 | 407 | Chain | ID=PRO_0000054938;Note=Eukaryotic initiation factor 4A-II |
Q14240 | 209 | 257 | 64 | 235 | Domain | Note=Helicase ATP-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00541 |
Q14240 | 303 | 333 | 246 | 407 | Domain | Note=Helicase C-terminal;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00542 |
Q14240 | 209 | 257 | 246 | 407 | Domain | Note=Helicase C-terminal;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00542 |
Q14240 | 209 | 257 | 212 | 213 | Sequence conflict | Note=LL->FA;Ontology_term=ECO:0000305;evidence=ECO:0000305 |
Q14240 | 209 | 257 | 209 | 213 | Beta strand | Ontology_term=ECO:0000244;evidence=ECO:0000244|PDB:3BOR |
Q14240 | 209 | 257 | 219 | 228 | Helix | Ontology_term=ECO:0000244;evidence=ECO:0000244|PDB:3BOR |
Q14240 | 209 | 257 | 233 | 235 | Beta strand | Ontology_term=ECO:0000244;evidence=ECO:0000244|PDB:3BOR |
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Gene expression level across TCGA pancancer |
Gene expression level across GTEx pantissue |
Expression level of gene isoforms across TCGA pancancer |
Expression level of gene isoforms across GTEx pantissue |
Cancer(tissue) type-specific expression level of Translation factor using z-score distriution |
Differential expression between tumor and matched normal (in the cancer types with more than 10 matched samples) |
Cancer type | Translation factor | FC | adj.pval |
LUAD | EIF4A2 | 1.8359785836448 | 0.000162905479402723 |
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Translation factor expression regulation through miRNA binding |
Cancer type | Gene | miRNA | TargetScan binding score (Context++ score percentile) | Coefficient | Pvalue |
Translation factor expression regulation through methylation in the promoter of Translation factor |
Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
Translation factor expression regulation through methylation in the gene body of Translation factor (positive regulation) |
Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
BLCA | EIF4A2 | 2 | 1 | 0.00368741606299217 | 0.218301666666667 | 0.100617163882259 | 0.465257071140773 | 0.0814221626282553 |
ESCA | EIF4A2 | 2 | 1 | 0.0249526733640416 | 0.265996052631579 | 0.112888109756098 | 0.34533373780709 | 0.518620323173271 |
Translation factor expression regulation through copy number variation of Translation factor |
Cancer type | Gene | Coefficient | Pvalue |
BLCA | EIF4A2 | 0.061804876 | 0.023127758 |
PCPG | EIF4A2 | 0.188987768 | 0.031662627 |
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Strongly correlated genes belong to cellular important gene groups with EIF4A2 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green) |
Cancer type | Gene group | Translation factor | Correlated gene | Coefficient | Pvalue |
THYM | Cell metabolism gene | EIF4A2 | PNPLA8 | 0.80946228 | 1.60E-29 |
THYM | Cell metabolism gene | EIF4A2 | MCFD2 | 0.809753934 | 1.47E-29 |
THYM | Cell metabolism gene | EIF4A2 | RAPGEF4 | 0.810674581 | 1.13E-29 |
THYM | Cell metabolism gene | EIF4A2 | MUT | 0.813323673 | 5.29E-30 |
THYM | Cell metabolism gene | EIF4A2 | GBE1 | 0.816126669 | 2.33E-30 |
THYM | Cell metabolism gene | EIF4A2 | AUH | 0.816283426 | 2.23E-30 |
THYM | Cell metabolism gene | EIF4A2 | PPP2CB | 0.816531185 | 2.07E-30 |
THYM | Cell metabolism gene | EIF4A2 | TNPO1 | 0.819988164 | 7.38E-31 |
THYM | Cell metabolism gene | EIF4A2 | PIP5K1A | 0.824141207 | 2.08E-31 |
THYM | Cell metabolism gene | EIF4A2 | GALNT3 | 0.825333864 | 1.43E-31 |
THYM | Cell metabolism gene | EIF4A2 | PIGK | 0.829162395 | 4.28E-32 |
THYM | Cell metabolism gene | EIF4A2 | COL4A3BP | 0.830188618 | 3.08E-32 |
THYM | Cell metabolism gene | EIF4A2 | SEC31A | 0.832896654 | 1.28E-32 |
THYM | Cell metabolism gene | EIF4A2 | LMAN1 | 0.837879202 | 2.43E-33 |
THYM | Cell metabolism gene | EIF4A2 | TRMT11 | 0.841161738 | 7.91E-34 |
THYM | Cell metabolism gene | EIF4A2 | AASDHPPT | 0.84235972 | 5.21E-34 |
THYM | Cell metabolism gene | EIF4A2 | SEC24D | 0.845716245 | 1.59E-34 |
THYM | Cell metabolism gene | EIF4A2 | PAPSS1 | 0.859372027 | 9.38E-37 |
THYM | Cell metabolism gene | EIF4A2 | PIK3R4 | 0.867151236 | 3.93E-38 |
THYM | Cell metabolism gene | EIF4A2 | PIK3C2A | 0.872857446 | 3.37E-39 |
THYM | CGC | EIF4A2 | TET2 | 0.80648273 | 3.68E-29 |
THYM | CGC | EIF4A2 | BMPR1A | 0.816220199 | 2.27E-30 |
THYM | CGC | EIF4A2 | LRIG3 | 0.816358698 | 2.18E-30 |
THYM | CGC | EIF4A2 | GOLGA5 | 0.818876806 | 1.03E-30 |
THYM | CGC | EIF4A2 | AFF4 | 0.824561844 | 1.82E-31 |
THYM | CGC | EIF4A2 | MAPK1 | 0.825183779 | 1.50E-31 |
THYM | CGC | EIF4A2 | KTN1 | 0.826919226 | 8.72E-32 |
THYM | CGC | EIF4A2 | FBXO11 | 0.832535165 | 1.44E-32 |
THYM | CGC | EIF4A2 | SBDS | 0.838249655 | 2.15E-33 |
THYM | CGC | EIF4A2 | ARHGAP5 | 0.838805997 | 1.78E-33 |
THYM | CGC | EIF4A2 | NFE2L2 | 0.871482285 | 6.15E-39 |
THYM | Epifactor | EIF4A2 | ADNP | 0.804778443 | 5.90E-29 |
THYM | Epifactor | EIF4A2 | DZIP3 | 0.806351066 | 3.82E-29 |
THYM | Epifactor | EIF4A2 | TET2 | 0.80648273 | 3.68E-29 |
THYM | Epifactor | EIF4A2 | INO80D | 0.814224188 | 4.07E-30 |
THYM | Epifactor | EIF4A2 | JMJD1C | 0.818358176 | 1.20E-30 |
THYM | Epifactor | EIF4A2 | KDM3B | 0.821761817 | 4.31E-31 |
THYM | Epifactor | EIF4A2 | ZMYND11 | 0.843065832 | 4.07E-34 |
THYM | IUPHAR | EIF4A2 | PTPRE | 0.800949413 | 1.67E-28 |
THYM | IUPHAR | EIF4A2 | SLC35A5 | 0.804768635 | 5.92E-29 |
THYM | IUPHAR | EIF4A2 | SLC30A5 | 0.805286888 | 5.13E-29 |
THYM | IUPHAR | EIF4A2 | SENP6 | 0.805725194 | 4.54E-29 |
THYM | IUPHAR | EIF4A2 | CSNK1G3 | 0.806628213 | 3.54E-29 |
THYM | IUPHAR | EIF4A2 | RAPGEF4 | 0.810674581 | 1.13E-29 |
THYM | IUPHAR | EIF4A2 | ATP6V1A | 0.811851591 | 8.08E-30 |
THYM | IUPHAR | EIF4A2 | BMPR1A | 0.816220199 | 2.27E-30 |
THYM | IUPHAR | EIF4A2 | NEK4 | 0.817871106 | 1.39E-30 |
THYM | IUPHAR | EIF4A2 | JMJD1C | 0.818358176 | 1.20E-30 |
THYM | IUPHAR | EIF4A2 | KDM3B | 0.821761817 | 4.31E-31 |
THYM | IUPHAR | EIF4A2 | PIP5K1A | 0.824141207 | 2.08E-31 |
THYM | IUPHAR | EIF4A2 | MAPK1 | 0.825183779 | 1.50E-31 |
THYM | IUPHAR | EIF4A2 | PREPL | 0.826916924 | 8.72E-32 |
THYM | IUPHAR | EIF4A2 | SLC25A36 | 0.827651877 | 6.92E-32 |
THYM | IUPHAR | EIF4A2 | SLC25A43 | 0.830099678 | 3.17E-32 |
THYM | IUPHAR | EIF4A2 | AHR | 0.830818101 | 2.51E-32 |
THYM | IUPHAR | EIF4A2 | FBXO11 | 0.832535165 | 1.44E-32 |
THYM | IUPHAR | EIF4A2 | ZMYND11 | 0.843065832 | 4.07E-34 |
THYM | IUPHAR | EIF4A2 | PKN2 | 0.847104341 | 9.67E-35 |
THYM | IUPHAR | EIF4A2 | SLC35F5 | 0.849270063 | 4.40E-35 |
THYM | IUPHAR | EIF4A2 | PDPK1 | 0.853715733 | 8.38E-36 |
THYM | IUPHAR | EIF4A2 | PIK3R4 | 0.867151236 | 3.93E-38 |
THYM | IUPHAR | EIF4A2 | NFE2L2 | 0.871482285 | 6.15E-39 |
THYM | IUPHAR | EIF4A2 | PIK3C2A | 0.872857446 | 3.37E-39 |
THYM | IUPHAR | EIF4A2 | MAP4K3 | 0.893855125 | 1.27E-43 |
THYM | Kinase | EIF4A2 | CSNK1G3 | 0.806628213 | 3.54E-29 |
THYM | Kinase | EIF4A2 | BMPR1A | 0.816220199 | 2.27E-30 |
THYM | Kinase | EIF4A2 | NEK4 | 0.817871106 | 1.39E-30 |
THYM | Kinase | EIF4A2 | MAPK1 | 0.825183779 | 1.50E-31 |
THYM | Kinase | EIF4A2 | COL4A3BP | 0.830188618 | 3.08E-32 |
THYM | Kinase | EIF4A2 | PKN2 | 0.847104341 | 9.67E-35 |
THYM | Kinase | EIF4A2 | PDPK1 | 0.853715733 | 8.38E-36 |
THYM | Kinase | EIF4A2 | PIK3R4 | 0.867151236 | 3.93E-38 |
THYM | Kinase | EIF4A2 | MAP4K3 | 0.893855125 | 1.27E-43 |
THYM | TF | EIF4A2 | ZBTB38 | 0.802737273 | 1.03E-28 |
THYM | TF | EIF4A2 | NFXL1 | 0.80306 | 9.45E-29 |
THYM | TF | EIF4A2 | ZNF304 | 0.803253391 | 8.96E-29 |
THYM | TF | EIF4A2 | ZXDC | 0.804049712 | 7.21E-29 |
THYM | TF | EIF4A2 | ADNP | 0.804778443 | 5.90E-29 |
THYM | TF | EIF4A2 | ZNF621 | 0.80646734 | 3.70E-29 |
THYM | TF | EIF4A2 | TET2 | 0.80648273 | 3.68E-29 |
THYM | TF | EIF4A2 | ZNF664 | 0.806641092 | 3.52E-29 |
THYM | TF | EIF4A2 | RREB1 | 0.809784992 | 1.46E-29 |
THYM | TF | EIF4A2 | ZNF432 | 0.817093196 | 1.75E-30 |
THYM | TF | EIF4A2 | ZNF440 | 0.818090129 | 1.30E-30 |
THYM | TF | EIF4A2 | ZNF441 | 0.827303099 | 7.72E-32 |
THYM | TF | EIF4A2 | AHR | 0.830818101 | 2.51E-32 |
THYM | TF | EIF4A2 | ZXDB | 0.830951967 | 2.41E-32 |
THYM | TF | EIF4A2 | ZBTB43 | 0.833638369 | 1.00E-32 |
THYM | TF | EIF4A2 | MEF2A | 0.836333074 | 4.10E-33 |
THYM | TF | EIF4A2 | ZNF274 | 0.837116269 | 3.15E-33 |
THYM | TF | EIF4A2 | ZNF136 | 0.841374773 | 7.34E-34 |
THYM | TF | EIF4A2 | ZNF420 | 0.844850899 | 2.17E-34 |
THYM | TF | EIF4A2 | ZNF354B | 0.845672117 | 1.62E-34 |
THYM | TF | EIF4A2 | ZNF180 | 0.861903857 | 3.41E-37 |
THYM | TF | EIF4A2 | NFE2L2 | 0.871482285 | 6.15E-39 |
THYM | TF | EIF4A2 | BBX | 0.872221905 | 4.45E-39 |
THYM | TSG | EIF4A2 | GORAB | 0.802375464 | 1.14E-28 |
THYM | TSG | EIF4A2 | TET2 | 0.80648273 | 3.68E-29 |
THYM | TSG | EIF4A2 | BMPR1A | 0.816220199 | 2.27E-30 |
THYM | TSG | EIF4A2 | LRIG3 | 0.816358698 | 2.18E-30 |
THYM | TSG | EIF4A2 | PPP2CB | 0.816531185 | 2.07E-30 |
THYM | TSG | EIF4A2 | KRIT1 | 0.817619053 | 1.50E-30 |
THYM | TSG | EIF4A2 | KDM3B | 0.821761817 | 4.31E-31 |
THYM | TSG | EIF4A2 | RCHY1 | 0.825700172 | 1.28E-31 |
THYM | TSG | EIF4A2 | AHR | 0.830818101 | 2.51E-32 |
THYM | TSG | EIF4A2 | DNAJB4 | 0.841819603 | 6.29E-34 |
THYM | TSG | EIF4A2 | ZMYND11 | 0.843065832 | 4.07E-34 |
UCS | Cell metabolism gene | EIF4A2 | PNPLA8 | 0.80946228 | 1.60E-29 |
UCS | Cell metabolism gene | EIF4A2 | MCFD2 | 0.809753934 | 1.47E-29 |
UCS | Cell metabolism gene | EIF4A2 | RAPGEF4 | 0.810674581 | 1.13E-29 |
UCS | Cell metabolism gene | EIF4A2 | MUT | 0.813323673 | 5.29E-30 |
UCS | Cell metabolism gene | EIF4A2 | GBE1 | 0.816126669 | 2.33E-30 |
UCS | Cell metabolism gene | EIF4A2 | AUH | 0.816283426 | 2.23E-30 |
UCS | Cell metabolism gene | EIF4A2 | PPP2CB | 0.816531185 | 2.07E-30 |
UCS | Cell metabolism gene | EIF4A2 | TNPO1 | 0.819988164 | 7.38E-31 |
UCS | Cell metabolism gene | EIF4A2 | PIP5K1A | 0.824141207 | 2.08E-31 |
UCS | Cell metabolism gene | EIF4A2 | GALNT3 | 0.825333864 | 1.43E-31 |
UCS | Cell metabolism gene | EIF4A2 | PIGK | 0.829162395 | 4.28E-32 |
UCS | Cell metabolism gene | EIF4A2 | COL4A3BP | 0.830188618 | 3.08E-32 |
UCS | Cell metabolism gene | EIF4A2 | SEC31A | 0.832896654 | 1.28E-32 |
UCS | Cell metabolism gene | EIF4A2 | LMAN1 | 0.837879202 | 2.43E-33 |
UCS | Cell metabolism gene | EIF4A2 | TRMT11 | 0.841161738 | 7.91E-34 |
UCS | Cell metabolism gene | EIF4A2 | AASDHPPT | 0.84235972 | 5.21E-34 |
UCS | Cell metabolism gene | EIF4A2 | SEC24D | 0.845716245 | 1.59E-34 |
UCS | Cell metabolism gene | EIF4A2 | PAPSS1 | 0.859372027 | 9.38E-37 |
UCS | Cell metabolism gene | EIF4A2 | PIK3R4 | 0.867151236 | 3.93E-38 |
UCS | Cell metabolism gene | EIF4A2 | PIK3C2A | 0.872857446 | 3.37E-39 |
UCS | CGC | EIF4A2 | TET2 | 0.80648273 | 3.68E-29 |
UCS | CGC | EIF4A2 | BMPR1A | 0.816220199 | 2.27E-30 |
UCS | CGC | EIF4A2 | LRIG3 | 0.816358698 | 2.18E-30 |
UCS | CGC | EIF4A2 | GOLGA5 | 0.818876806 | 1.03E-30 |
UCS | CGC | EIF4A2 | AFF4 | 0.824561844 | 1.82E-31 |
UCS | CGC | EIF4A2 | MAPK1 | 0.825183779 | 1.50E-31 |
UCS | CGC | EIF4A2 | KTN1 | 0.826919226 | 8.72E-32 |
UCS | CGC | EIF4A2 | FBXO11 | 0.832535165 | 1.44E-32 |
UCS | CGC | EIF4A2 | SBDS | 0.838249655 | 2.15E-33 |
UCS | CGC | EIF4A2 | ARHGAP5 | 0.838805997 | 1.78E-33 |
UCS | CGC | EIF4A2 | NFE2L2 | 0.871482285 | 6.15E-39 |
UCS | Epifactor | EIF4A2 | ADNP | 0.804778443 | 5.90E-29 |
UCS | Epifactor | EIF4A2 | DZIP3 | 0.806351066 | 3.82E-29 |
UCS | Epifactor | EIF4A2 | TET2 | 0.80648273 | 3.68E-29 |
UCS | Epifactor | EIF4A2 | INO80D | 0.814224188 | 4.07E-30 |
UCS | Epifactor | EIF4A2 | JMJD1C | 0.818358176 | 1.20E-30 |
UCS | Epifactor | EIF4A2 | KDM3B | 0.821761817 | 4.31E-31 |
UCS | Epifactor | EIF4A2 | ZMYND11 | 0.843065832 | 4.07E-34 |
UCS | IUPHAR | EIF4A2 | PTPRE | 0.800949413 | 1.67E-28 |
UCS | IUPHAR | EIF4A2 | SLC35A5 | 0.804768635 | 5.92E-29 |
UCS | IUPHAR | EIF4A2 | SLC30A5 | 0.805286888 | 5.13E-29 |
UCS | IUPHAR | EIF4A2 | SENP6 | 0.805725194 | 4.54E-29 |
UCS | IUPHAR | EIF4A2 | CSNK1G3 | 0.806628213 | 3.54E-29 |
UCS | IUPHAR | EIF4A2 | RAPGEF4 | 0.810674581 | 1.13E-29 |
UCS | IUPHAR | EIF4A2 | ATP6V1A | 0.811851591 | 8.08E-30 |
UCS | IUPHAR | EIF4A2 | BMPR1A | 0.816220199 | 2.27E-30 |
UCS | IUPHAR | EIF4A2 | NEK4 | 0.817871106 | 1.39E-30 |
UCS | IUPHAR | EIF4A2 | JMJD1C | 0.818358176 | 1.20E-30 |
UCS | IUPHAR | EIF4A2 | KDM3B | 0.821761817 | 4.31E-31 |
UCS | IUPHAR | EIF4A2 | PIP5K1A | 0.824141207 | 2.08E-31 |
UCS | IUPHAR | EIF4A2 | MAPK1 | 0.825183779 | 1.50E-31 |
UCS | IUPHAR | EIF4A2 | PREPL | 0.826916924 | 8.72E-32 |
UCS | IUPHAR | EIF4A2 | SLC25A36 | 0.827651877 | 6.92E-32 |
UCS | IUPHAR | EIF4A2 | SLC25A43 | 0.830099678 | 3.17E-32 |
UCS | IUPHAR | EIF4A2 | AHR | 0.830818101 | 2.51E-32 |
UCS | IUPHAR | EIF4A2 | FBXO11 | 0.832535165 | 1.44E-32 |
UCS | IUPHAR | EIF4A2 | ZMYND11 | 0.843065832 | 4.07E-34 |
UCS | IUPHAR | EIF4A2 | PKN2 | 0.847104341 | 9.67E-35 |
UCS | IUPHAR | EIF4A2 | SLC35F5 | 0.849270063 | 4.40E-35 |
UCS | IUPHAR | EIF4A2 | PDPK1 | 0.853715733 | 8.38E-36 |
UCS | IUPHAR | EIF4A2 | PIK3R4 | 0.867151236 | 3.93E-38 |
UCS | IUPHAR | EIF4A2 | NFE2L2 | 0.871482285 | 6.15E-39 |
UCS | IUPHAR | EIF4A2 | PIK3C2A | 0.872857446 | 3.37E-39 |
UCS | IUPHAR | EIF4A2 | MAP4K3 | 0.893855125 | 1.27E-43 |
UCS | Kinase | EIF4A2 | CSNK1G3 | 0.806628213 | 3.54E-29 |
UCS | Kinase | EIF4A2 | BMPR1A | 0.816220199 | 2.27E-30 |
UCS | Kinase | EIF4A2 | NEK4 | 0.817871106 | 1.39E-30 |
UCS | Kinase | EIF4A2 | MAPK1 | 0.825183779 | 1.50E-31 |
UCS | Kinase | EIF4A2 | COL4A3BP | 0.830188618 | 3.08E-32 |
UCS | Kinase | EIF4A2 | PKN2 | 0.847104341 | 9.67E-35 |
UCS | Kinase | EIF4A2 | PDPK1 | 0.853715733 | 8.38E-36 |
UCS | Kinase | EIF4A2 | PIK3R4 | 0.867151236 | 3.93E-38 |
UCS | Kinase | EIF4A2 | MAP4K3 | 0.893855125 | 1.27E-43 |
UCS | TF | EIF4A2 | ZBTB38 | 0.802737273 | 1.03E-28 |
UCS | TF | EIF4A2 | NFXL1 | 0.80306 | 9.45E-29 |
UCS | TF | EIF4A2 | ZNF304 | 0.803253391 | 8.96E-29 |
UCS | TF | EIF4A2 | ZXDC | 0.804049712 | 7.21E-29 |
UCS | TF | EIF4A2 | ADNP | 0.804778443 | 5.90E-29 |
UCS | TF | EIF4A2 | ZNF621 | 0.80646734 | 3.70E-29 |
UCS | TF | EIF4A2 | TET2 | 0.80648273 | 3.68E-29 |
UCS | TF | EIF4A2 | ZNF664 | 0.806641092 | 3.52E-29 |
UCS | TF | EIF4A2 | RREB1 | 0.809784992 | 1.46E-29 |
UCS | TF | EIF4A2 | ZNF432 | 0.817093196 | 1.75E-30 |
UCS | TF | EIF4A2 | ZNF440 | 0.818090129 | 1.30E-30 |
UCS | TF | EIF4A2 | ZNF441 | 0.827303099 | 7.72E-32 |
UCS | TF | EIF4A2 | AHR | 0.830818101 | 2.51E-32 |
UCS | TF | EIF4A2 | ZXDB | 0.830951967 | 2.41E-32 |
UCS | TF | EIF4A2 | ZBTB43 | 0.833638369 | 1.00E-32 |
UCS | TF | EIF4A2 | MEF2A | 0.836333074 | 4.10E-33 |
UCS | TF | EIF4A2 | ZNF274 | 0.837116269 | 3.15E-33 |
UCS | TF | EIF4A2 | ZNF136 | 0.841374773 | 7.34E-34 |
UCS | TF | EIF4A2 | ZNF420 | 0.844850899 | 2.17E-34 |
UCS | TF | EIF4A2 | ZNF354B | 0.845672117 | 1.62E-34 |
UCS | TF | EIF4A2 | ZNF180 | 0.861903857 | 3.41E-37 |
UCS | TF | EIF4A2 | NFE2L2 | 0.871482285 | 6.15E-39 |
UCS | TF | EIF4A2 | BBX | 0.872221905 | 4.45E-39 |
UCS | TSG | EIF4A2 | GORAB | 0.802375464 | 1.14E-28 |
UCS | TSG | EIF4A2 | TET2 | 0.80648273 | 3.68E-29 |
UCS | TSG | EIF4A2 | BMPR1A | 0.816220199 | 2.27E-30 |
UCS | TSG | EIF4A2 | LRIG3 | 0.816358698 | 2.18E-30 |
UCS | TSG | EIF4A2 | PPP2CB | 0.816531185 | 2.07E-30 |
UCS | TSG | EIF4A2 | KRIT1 | 0.817619053 | 1.50E-30 |
UCS | TSG | EIF4A2 | KDM3B | 0.821761817 | 4.31E-31 |
UCS | TSG | EIF4A2 | RCHY1 | 0.825700172 | 1.28E-31 |
UCS | TSG | EIF4A2 | AHR | 0.830818101 | 2.51E-32 |
UCS | TSG | EIF4A2 | DNAJB4 | 0.841819603 | 6.29E-34 |
UCS | TSG | EIF4A2 | ZMYND11 | 0.843065832 | 4.07E-34 |
UVM | Cell metabolism gene | EIF4A2 | TOMM70A | 0.834731324 | 6.60E-22 |
UVM | Cell metabolism gene | EIF4A2 | PIK3R4 | 0.839312923 | 2.42E-22 |
UVM | CGC | EIF4A2 | MLF1 | 0.80056581 | 5.03E-19 |
UVM | CGC | EIF4A2 | RAF1 | 0.853566058 | 8.58E-24 |
UVM | Epifactor | EIF4A2 | SATB1 | 0.802201233 | 3.77E-19 |
UVM | Epifactor | EIF4A2 | RYBP | 0.804155587 | 2.66E-19 |
UVM | Epifactor | EIF4A2 | MSL2 | 0.808143161 | 1.30E-19 |
UVM | Epifactor | EIF4A2 | UBE2E1 | 0.808602382 | 1.19E-19 |
UVM | Epifactor | EIF4A2 | SETMAR | 0.825122478 | 4.93E-21 |
UVM | Epifactor | EIF4A2 | SETD5 | 0.835890194 | 5.13E-22 |
UVM | IUPHAR | EIF4A2 | NEK11 | 0.815251495 | 3.43E-20 |
UVM | IUPHAR | EIF4A2 | ATP2C1 | 0.822037351 | 9.15E-21 |
UVM | IUPHAR | EIF4A2 | PIK3R4 | 0.839312923 | 2.42E-22 |
UVM | IUPHAR | EIF4A2 | RAF1 | 0.853566058 | 8.58E-24 |
UVM | Kinase | EIF4A2 | NEK11 | 0.815251495 | 3.43E-20 |
UVM | Kinase | EIF4A2 | PIK3R4 | 0.839312923 | 2.42E-22 |
UVM | Kinase | EIF4A2 | RAF1 | 0.853566058 | 8.58E-24 |
UVM | TF | EIF4A2 | SATB1 | 0.802201233 | 3.77E-19 |
UVM | TF | EIF4A2 | ZNF667 | 0.811488179 | 6.98E-20 |
UVM | TF | EIF4A2 | ZNF391 | 0.816181771 | 2.87E-20 |
UVM | TF | EIF4A2 | ZNF415 | 0.82084525 | 1.16E-20 |
UVM | TF | EIF4A2 | ZNF197 | 0.838620252 | 2.82E-22 |
UVM | TSG | EIF4A2 | WDR48 | 0.814280681 | 4.13E-20 |
UVM | TSG | EIF4A2 | MTUS1 | 0.859146237 | 2.11E-24 |
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Protein 3D structure Visit iCn3D. |
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Protein-protein interaction networks * Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
Overlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
* Edge colors based on TCGA cancer types. |
* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P)) |
Cancer type | Translation factor | Interacting protein coding gene | FC | adj.pval |
HNSC | EIF4A2 | EIF1 | -4.13399438210909 | 0.000228392819053625 |
LUAD | EIF4A2 | PDCD4 | 1.15931823826993 | 0.00162636946590219 |
BRCA | EIF4A2 | EIF4G2 | 1.33801911881742 | 0.0018433651637361 |
BRCA | EIF4A2 | EIF4G3 | 1.34206807761848 | 0.00309822300858815 |
CHOL | EIF4A2 | PABPC1 | -4.56272528815353 | 0.00390625 |
STAD | EIF4A2 | EIF4G2 | -4.30902559301167 | 0.0050255935639143 |
KICH | EIF4A2 | EIF4G1 | -1.46656081150743 | 0.00612920522689819 |
PRAD | EIF4A2 | EIF1 | 1.32822648991353 | 0.00674237731133815 |
BLCA | EIF4A2 | PABPC1 | 1.31485302792746 | 0.0180816650390625 |
READ | EIF4A2 | PDCD4 | -3.13328676129312 | 0.03125 |
ESCA | EIF4A2 | EIF4A1 | -1.24538073199285 | 0.0419921875 |
HNSC | EIF4A2 | PDCD4 | -6.91824922290957 | 1.13186615635641e-09 |
THCA | EIF4A2 | EIF4G3 | -1.00361616225016 | 1.40000643717562e-05 |
LUAD | EIF4A2 | EIF4G3 | -4.21879885884405 | 2.22325471114907e-07 |
BRCA | EIF4A2 | EIF4B | -2.16032742029696 | 2.35556737304054e-22 |
LIHC | EIF4A2 | PABPC1 | -1.72076961362188 | 2.98009622125841e-06 |
LUSC | EIF4A2 | EIF4G3 | -4.43634473815109 | 3.64325144746635e-05 |
KICH | EIF4A2 | EIF4E | 1.61675210562671 | 6.55651092529297e-06 |
KIRC | EIF4A2 | EIF4B | 1.14997140510474 | 7.59366366705366e-09 |
KICH | EIF4A2 | EIF4A1 | 1.14485583309571 | 8.16583633422851e-06 |
PRAD | EIF4A2 | PABPC1 | -2.10200318363476 | 8.55379952759014e-07 |
COAD | EIF4A2 | PDCD4 | -5.14091568352005 | 8.94069671630861e-08 |
Protein-protein interactors with this translation factor (BIOGRID-3.4.160) |
PPI interactors with EIF4A2 |
EIF4G1, EIF3A, PDCD4, P4HB, EIF3L, EIF3D, EIF3H, MYO1B, EIF3M, PABPC1, EIF3K, EIF4G3, DDX3X, EIF4G2, EIF4E, CD2BP2, SPAG9, AKAP17A, ATRX, VAC14, ALPI, PTPRS, RPS29, TPM3, CMBL, EIF3F, RPAP2, CD4, Eif3a, NEK2, TK1, PFDN1, EIF4A1, DDX39B, BRCA1, ECT2, VCP, CD81, BAG3, EIF4A2, MDFI, IPO11, DPPA4, TRIM36, TRIM39, SSX2IP, PIH1D2, SLC16A9, HNRNPA1, HSPB1, UNK, AIMP1, CETN2, RPSA, EIF4A3, LAGE3, HSPB2, GOLGA2, CRY1, CRY2, MCM2, CDC5L, DUSP28, CYLD, TRIM25, MCPH1, FBXO7, TMPO, HEXIM1, RUNX1, SUZ12, NR2C2, AGRN, APEX1, ITFG1, TRIM28, PPIA, TEX101, ZNF620, LINC01554, SH3GL3, MN1, CDCA5, ATXN2, EIF3B, EIF3C, EIF3E, EIF3G, EIF3I, EIF4B, PABPC4, PRRC2A, PRRC2B, PRRC2C, TDRD3, TOP3B, UPF1, USP10, IBTK, YTHDF2, SMG1, CIT, ANLN, CHMP4C, KIF14, KIF20A, KIF23, PRC1, PRNP, SUMO2, NUPR1, EIF4EBP2, EIF4ENIF1, EIF4EBP1, ANGEL1, SPOP, DDRGK1, TUBB, TRIM37, SPRTN, CCNF, HECTD1, OPTN, |
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Clinically associated variants from ClinVar. |
Gene | Chr | Position | RefSeq | VarSeq | RefSeeq | VarType | Pathogenic | Disease | VarInfo |
nsSNVs with sample frequency (size of circle) from TCGA 33 cancers. |
SNVs and Indels |
Gene | Cancer type | Chromosome | Start | End | RefSeeq | MutSeq | Mutation type | AAchange | # samples |
EIF4A2 | LUAD | chr3 | 186505350 | 186505350 | G | T | Missense_Mutation | p.V326F | 7 |
EIF4A2 | BRCA | chr3 | 186502374 | 186502374 | G | A | Missense_Mutation | p.D33N | 4 |
EIF4A2 | BRCA | chr3 | 186505647 | 186505647 | C | G | Missense_Mutation | p.T352S | 3 |
EIF4A2 | LIHC | chr3 | 186504304 | 186504304 | C | T | Missense_Mutation | p.S214F | 3 |
EIF4A2 | UCEC | chr3 | 186505598 | 186505598 | G | T | Missense_Mutation | p.G336W | 3 |
EIF4A2 | KIRP | chr3 | 186503770 | 186503770 | G | T | Missense_Mutation | p.Q149H | 3 |
EIF4A2 | PAAD | chr3 | 186505616 | 186505616 | G | A | Missense_Mutation | p.V342M | 3 |
EIF4A2 | BRCA | chr3 | 186503952 | 186503952 | G | A | Splice_Site | e6-1 | 3 |
EIF4A2 | ESCA | chr3 | 186504993 | 186504993 | G | T | Missense_Mutation | p.R283S | 3 |
EIF4A2 | BRCA | chr3 | 186504030 | 186504030 | G | C | Missense_Mutation | p.E199Q | 3 |
EIF4A2 | BRCA | chr3 | 186504350 | 186504351 | GA | - | Frame_Shift_Del | p.D231fs | 3 |
EIF4A2 | LUAD | chr3 | 186502264 | 186502264 | G | C | Missense_Mutation | p.E25Q | 2 |
EIF4A2 | SARC | chr3 | 186506919 | 186506919 | G | A | Missense_Mutation | 2 | |
EIF4A2 | SKCM | chr3 | 186505599 | 186505599 | G | A | Missense_Mutation | p.G336E | 2 |
EIF4A2 | CESC | chr3 | 186503991 | 186503991 | G | T | Missense_Mutation | 2 | |
EIF4A2 | KIRC | chr3 | 186504360 | 186504360 | A | C | Missense_Mutation | p.I233L | 2 |
EIF4A2 | BLCA | chr3 | 186504931 | 186504932 | AC | - | Frame_Shift_Del | p.T263fs | 2 |
EIF4A2 | KIRC | chr3 | 186505363 | 186505363 | C | T | Missense_Mutation | p.T330I | 2 |
EIF4A2 | LIHC | chr3 | 186503676 | 186503676 | A | - | Frame_Shift_Del | p.Q118fs | 2 |
EIF4A2 | CESC | chr3 | 186504951 | 186504951 | G | A | Silent | 2 | |
EIF4A2 | UCEC | chr3 | 186503752 | 186503752 | T | C | Nonstop_Mutation | p.*98R | 2 |
EIF4A2 | CESC | chr3 | 186505011 | 186505011 | G | C | Silent | 2 | |
EIF4A2 | UCEC | chr3 | 186503753 | 186503753 | G | T | Nonsense_Mutation | p.E144* | 2 |
EIF4A2 | STAD | chr3 | 186502807 | 186502807 | A | G | Missense_Mutation | p.I89V | 2 |
EIF4A2 | CESC | chr3 | 186502437 | 186502437 | G | C | Missense_Mutation | 2 | |
EIF4A2 | UCEC | chr3 | 186504412 | 186504412 | T | G | Missense_Mutation | p.F250C | 2 |
EIF4A2 | BRCA | chr3 | 186507018 | 186507018 | C | T | Missense_Mutation | p.T395I | 2 |
EIF4A2 | STAD | chr3 | 186504931 | 186504931 | A | G | Missense_Mutation | p.T263A | 2 |
EIF4A2 | CESC | chr3 | 186503748 | 186503748 | G | C | Missense_Mutation | 2 | |
EIF4A2 | BLCA | chr3 | 186501413 | 186501413 | C | T | Missense_Mutation | p.S5F | 2 |
EIF4A2 | PAAD | chr3 | 186505616 | 186505616 | G | A | Missense_Mutation | 2 | |
EIF4A2 | UCEC | chr3 | 186502819 | 186502819 | C | T | Nonsense_Mutation | p.Q93* | 2 |
EIF4A2 | UCEC | chr3 | 186504995 | 186504995 | G | A | Missense_Mutation | p.R284H | 2 |
EIF4A2 | SKCM | chr3 | 186502263 | 186502263 | C | T | Silent | p.I24I | 2 |
EIF4A2 | STAD | chr3 | 186505288 | 186505288 | G | A | Missense_Mutation | p.G305D | 2 |
EIF4A2 | ESCA | chr3 | 186507053 | 186507053 | A | G | Missense_Mutation | 2 | |
EIF4A2 | UCEC | chr3 | 186505341 | 186505341 | T | C | Missense_Mutation | p.S323P | 2 |
EIF4A2 | LGG | chr3 | 186501406 | 186501406 | G | T | Missense_Mutation | p.G3C | 2 |
EIF4A2 | STAD | chr3 | 186504980 | 186504980 | T | C | Missense_Mutation | p.F279S | 2 |
EIF4A2 | PAAD | chr3 | 186503747 | 186503747 | C | A | Silent | p.R142R | 2 |
EIF4A2 | UCEC | chr3 | 186505363 | 186505368 | CTGACT | - | In_Frame_Del | p.TDL330in_frame_delM | 2 |
EIF4A2 | SKCM | chr3 | 186504350 | 186504350 | G | A | Missense_Mutation | p.M229I | 2 |
EIF4A2 | LUAD | chr3 | 186503788 | 186503788 | T | C | Silent | p.I155I | 2 |
EIF4A2 | STAD | chr3 | 186504345 | 186504345 | T | A | Missense_Mutation | p.F228I | 2 |
EIF4A2 | BLCA | chr3 | 186503747 | 186503747 | C | A | Silent | 2 | |
EIF4A2 | BLCA | chr3 | 186505329 | 186505329 | T | G | Missense_Mutation | p.F319V | 2 |
EIF4A2 | SARC | chr3 | 186504939 | 186504939 | T | G | Missense_Mutation | 2 | |
EIF4A2 | UCEC | chr3 | 186506991 | 186506991 | G | A | Missense_Mutation | p.R386H | 2 |
EIF4A2 | LIHC | chr3 | 186504304 | 186504304 | C | T | Missense_Mutation | 2 | |
EIF4A2 | SKCM | chr3 | 186502861 | 186502861 | T | C | Silent | p.L107L | 2 |
EIF4A2 | STAD | chr3 | 186503790 | 186503790 | T | A | Missense_Mutation | p.V156D | 2 |
EIF4A2 | ESCA | chr3 | 186507053 | 186507053 | A | G | Missense_Mutation | p.I407V | 2 |
EIF4A2 | HNSC | chr3 | 186504984 | 186504984 | C | G | Silent | p.L280L | 2 |
EIF4A2 | SARC | chr3 | 186502839 | 186502839 | C | T | Silent | 2 | |
EIF4A2 | LIHC | chr3 | 186502251 | 186502271 | CGATGGTGTCATCGAGGTAAG | - | Splice_Site | 1 | |
EIF4A2 | SKCM | chr3 | 186501362 | 186501362 | C | T | Splice_Site | . | 1 |
EIF4A2 | BLCA | chr3 | 186507037 | 186507037 | G | A | Missense_Mutation | 1 | |
EIF4A2 | BLCA | chr3 | 186502252 | 186502252 | G | A | Missense_Mutation | 1 | |
EIF4A2 | CHOL | chr3 | 186504030 | 186504030 | G | T | Nonsense_Mutation | p.E199X | 1 |
EIF4A2 | THYM | chr3 | 186501279 | 186501279 | C | T | Missense_Mutation | 1 | |
EIF4A2 | BLCA | chr3 | 186502252 | 186502252 | G | A | Missense_Mutation | p.D21N | 1 |
EIF4A2 | ESCA | chr3 | 186503674 | 186503674 | C | T | Silent | p.I117I | 1 |
EIF4A2 | KIRC | chr3 | 186505633 | 186505633 | T | G | Missense_Mutation | p.N347K | 1 |
EIF4A2 | LIHC | chr3 | 186502787 | 186502787 | G | C | Missense_Mutation | p.G82A | 1 |
EIF4A2 | BLCA | chr3 | 186501413 | 186501413 | C | T | Missense_Mutation | 1 | |
EIF4A2 | BLCA | chr3 | 186502264 | 186502264 | G | A | Missense_Mutation | 1 | |
EIF4A2 | COAD | chr3 | 186502466 | 186502468 | TAT | - | In_Frame_Del | p.63_64del | 1 |
EIF4A2 | LUAD | chr3 | 186504304 | 186504304 | C | G | Missense_Mutation | p.S214C | 1 |
EIF4A2 | THYM | chr3 | 186504396 | 186504396 | G | T | Nonsense_Mutation | p.E245X | 1 |
EIF4A2 | BLCA | chr3 | 186505012 | 186505012 | A | G | Missense_Mutation | p.T290A | 1 |
EIF4A2 | HNSC | chr3 | 186501414 | 186501414 | C | A | Silent | 1 | |
EIF4A2 | SARC | chr3 | 186504939 | 186504939 | T | G | Missense_Mutation | p.C265W | 1 |
EIF4A2 | SKCM | chr3 | 186504002 | 186504002 | G | A | Silent | p.L189L | 1 |
EIF4A2 | BLCA | chr3 | 186504931 | 186504932 | AC | - | Frame_Shift_Del | 1 | |
EIF4A2 | CESC | chr3 | 186502788 | 186502798 | CAAGACAGCCA | - | Frame_Shift_Del | 1 | |
EIF4A2 | BLCA | chr3 | 186502365 | 186502365 | G | A | Missense_Mutation | 1 | |
EIF4A2 | DLBC | chr3 | 186502355 | 186502355 | C | G | Missense_Mutation | p.S26R | 1 |
EIF4A2 | LUSC | chr3 | 186503789 | 186503789 | G | A | Missense_Mutation | p.V156I | 1 |
EIF4A2 | HNSC | chr3 | 186502849 | 186502849 | C | A | Missense_Mutation | 1 | |
EIF4A2 | SARC | chr3 | 186502839 | 186502839 | C | T | Silent | p.F99F | 1 |
EIF4A2 | SKCM | chr3 | 186504015 | 186504015 | A | - | Frame_Shift_Del | p.K194fs | 1 |
EIF4A2 | BLCA | chr3 | 186502795 | 186502795 | G | T | Missense_Mutation | 1 | |
EIF4A2 | BLCA | chr3 | 186505012 | 186505012 | A | G | Missense_Mutation | 1 | |
EIF4A2 | DLBC | chr3 | 186502430 | 186502430 | C | T | Silent | p.Y51Y | 1 |
EIF4A2 | LUSC | chr3 | 186504960 | 186504960 | C | A | Silent | p.T272T | 1 |
EIF4A2 | UCEC | chr3 | 186503752 | 186503752 | T | C | Silent | p.N143N | 1 |
EIF4A2 | BLCA | chr3 | 186503971 | 186503974 | TGTT | - | Frame_Shift_Del | p.MF179fs | 1 |
EIF4A2 | HNSC | chr3 | 186504984 | 186504984 | C | G | Silent | 1 | |
EIF4A2 | KIRP | chr3 | 186505347 | 186505348 | - | A | Frame_Shift_Ins | p.R325fs | 1 |
EIF4A2 | SARC | chr3 | 186502839 | 186502839 | C | T | Silent | p.F100 | 1 |
EIF4A2 | LIHC | chr3 | 186504339 | 186504339 | A | - | Frame_Shift_Del | p.K227fs | 1 |
EIF4A2 | SKCM | chr3 | 186507006 | 186507007 | TC | - | Frame_Shift_Del | p.F391fs | 1 |
EIF4A2 | BLCA | chr3 | 186503736 | 186503736 | G | A | Missense_Mutation | 1 | |
EIF4A2 | BLCA | chr3 | 186506969 | 186506969 | G | T | Nonsense_Mutation | p.E379* | 1 |
EIF4A2 | ESCA | chr3 | 186507053 | 186507053 | A | G | Missense_Mutation | p.I408V | 1 |
EIF4A2 | OV | chr3 | 187984101 | 187984101 | G | T | Missense_Mutation | 1 | |
EIF4A2 | UCEC | chr3 | 186504998 | 186504998 | A | G | Missense_Mutation | p.K285R | 1 |
EIF4A2 | BLCA | chr3 | 186503971 | 186503974 | TGTT | - | Frame_Shift_Del | p.M179fs | 1 |
EIF4A2 | HNSC | chr3 | 186501400 | 186501421 | ATGTCTGGTGGCTCCGCGGATT | - | Frame_Shift_Del | 1 | |
EIF4A2 | KIRP | chr3 | 186504962 | 186504962 | T | C | Missense_Mutation | p.I273T | 1 |
EIF4A2 | SARC | chr3 | 186504939 | 186504939 | T | G | Missense_Mutation | p.C266W | 1 |
EIF4A2 | LUAD | chr3 | 186505046 | 186505046 | C | T | Missense_Mutation | p.S301F | 1 |
EIF4A2 | BLCA | chr3 | 186502228 | 186502228 | G | C | Missense_Mutation | 1 | |
EIF4A2 | BLCA | chr3 | 186507037 | 186507037 | G | A | Missense_Mutation | p.M401I | 1 |
EIF4A2 | ESCA | chr3 | 186503674 | 186503674 | C | T | Missense_Mutation | p.P72S | 1 |
EIF4A2 | OV | chr3 | 187988016 | 187988016 | G | C | Missense_Mutation | 1 | |
EIF4A2 | UCEC | chr3 | 186505363 | 186505368 | CTGACT | - | In_Frame_Del | p.330_332TDL>M | 1 |
EIF4A2 | HNSC | chr3 | 186504028 | 186504028 | A | T | Missense_Mutation | 1 | |
EIF4A2 | SARC | chr3 | 186506919 | 186506919 | G | A | Missense_Mutation | p.G363D | 1 |
EIF4A2 | BLCA | chr3 | 186501375 | 186501375 | C | T | Missense_Mutation | 1 | |
EIF4A2 | ESCA | chr3 | 186504993 | 186504993 | G | T | Missense_Mutation | p.R284S | 1 |
EIF4A2 | HNSC | chr3 | 186505353 | 186505353 | C | G | Missense_Mutation | 1 | |
EIF4A2 | KIRP | chr3 | 186503770 | 186503770 | G | T | Missense_Mutation | 1 | |
EIF4A2 | LUAD | chr3 | 186506920 | 186506920 | C | T | Silent | p.G362G | 1 |
EIF4A2 | BLCA | chr3 | 186503971 | 186503974 | TGTT | - | Frame_Shift_Del | 1 | |
EIF4A2 | CESC | chr3 | 186502834 | 186502834 | G | T | Nonsense_Mutation | 1 | |
EIF4A2 | BLCA | chr3 | 186502795 | 186502795 | G | T | Missense_Mutation | p.A85S | 1 |
EIF4A2 | HNSC | chr3 | 186505353 | 186505353 | C | G | Missense_Mutation | p.L327V | 1 |
EIF4A2 | SKCM | chr3 | 186504015 | 186504015 | A | - | Frame_Shift_Del | p.F193fs | 1 |
EIF4A2 | LUAD | chr3 | 186502391 | 186502391 | G | T | Missense_Mutation | p.M38I | 1 |
EIF4A2 | BLCA | chr3 | 186505329 | 186505329 | T | G | Missense_Mutation | 1 | |
EIF4A2 | CESC | chr3 | 186502834 | 186502834 | G | T | Nonsense_Mutation | p.E99* | 1 |
EIF4A2 | BLCA | chr3 | 186503736 | 186503736 | G | A | Missense_Mutation | p.G138E | 1 |
EIF4A2 | LGG | chr3 | 186501406 | 186501406 | G | T | Missense_Mutation | 1 | |
EIF4A2 | CESC | chr3 | 186502437 | 186502437 | G | C | Missense_Mutation | p.E55Q | 1 |
EIF4A2 | ESCA | chr3 | 186506930 | 186506930 | C | A | Silent | p.R366R | 1 |
EIF4A2 | HNSC | chr3 | 186504028 | 186504028 | A | T | Missense_Mutation | p.Y198F | 1 |
EIF4A2 | BLCA | chr3 | 186503753 | 186503753 | G | A | Missense_Mutation | 1 | |
EIF4A2 | CESC | chr3 | 186505011 | 186505011 | G | C | Silent | p.L290 | 1 |
EIF4A2 | LUAD | chr3 | 186501404 | 186501404 | C | T | Missense_Mutation | p.S2F | 1 |
EIF4A2 | BLCA | chr3 | 186503753 | 186503753 | G | A | Missense_Mutation | p.E144K | 1 |
Copy number variation (CNV) of EIF4A2 * Click on the image to open the original image in a new window. |
Fusion gene breakpoints (product of the structural variants (SVs)) across EIF4A2 * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion genes with this translation factor from FusionGDB2.0. |
FusionGDB2 ID | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
99660 | N/A | BF840289 | ACTR2 | chr2 | 65497286 | - | EIF4A2 | chr3 | 186506064 | + |
99660 | N/A | AI810008 | ATP6V1C2 | chr2 | 10923658 | + | EIF4A2 | chr3 | 186506831 | - |
99660 | N/A | FN161688 | C12orf42 | chr12 | 103745137 | - | EIF4A2 | chr3 | 186507301 | - |
99660 | THCA | TCGA-DJ-A3V6-01A | CTSB | chr8 | 11701564 | - | EIF4A2 | chr3 | 186501336 | + |
99660 | N/A | BF987336 | DLG5 | chr10 | 79584177 | + | EIF4A2 | chr3 | 186502299 | - |
87203 | STAD | TCGA-BR-8284-01A | EIF4A2 | chr3 | 186501428 | + | AARS | chr16 | 70316687 | - |
103286 | GBM | TCGA-06-0238-01A | EIF4A2 | chr3 | 186502266 | + | ACTR3 | chr2 | 114691856 | + |
87811 | N/A | EY123259 | EIF4A2 | chr3 | 186507553 | + | ATG13 | chr11 | 46650505 | - |
89533 | OV | TCGA-13-A5FT-01A | EIF4A2 | chr3 | 186502266 | + | DNAJB11 | chr3 | 186314843 | + |
89533 | OV | TCGA-13-A5FT-01A | EIF4A2 | chr3 | 186502302 | + | DNAJB11 | chr3 | 186314843 | + |
99660 | N/A | AA523672 | EIF4A2 | chr3 | 186507529 | - | EIF4A2 | chr3 | 186507500 | + |
99660 | N/A | AA730953 | EIF4A2 | chr3 | 186507443 | + | EIF4A2 | chr3 | 186507476 | - |
99660 | N/A | AW840050 | EIF4A2 | chr3 | 186505963 | + | EIF4A2 | chr3 | 186505704 | - |
99660 | N/A | BG979271 | EIF4A2 | chr3 | 186506486 | - | EIF4A2 | chr3 | 186506836 | + |
95355 | BRCA | TCGA-AC-A2BK-01A | EIF4A2 | chr3 | 186502414 | + | FAM149B1 | chr10 | 74959593 | + |
86127 | N/A | BM773122 | EIF4A2 | chr3 | 186506183 | + | FUS | chr16 | 31202784 | + |
89879 | STAD | TCGA-HU-A4GT-01A | EIF4A2 | chr3 | 186505373 | + | HIF1A | chr14 | 62213652 | + |
25949 | LUSC | TCGA-34-5232 | EIF4A2 | chr3 | 186502017 | + | IGKC | chr2 | 89161431 | - |
98603 | LIHC | TCGA-BC-A10Y-01A | EIF4A2 | chr3 | 186504062 | + | KNG1 | chr3 | 186461494 | + |
103085 | N/A | DA558800 | EIF4A2 | chr3 | 186505539 | + | LMNA | chr1 | 156084526 | + |
94565 | STAD | TCGA-BR-8284-01A | EIF4A2 | chr3 | 186504434 | + | NUP107 | chr12 | 69109407 | + |
93298 | N/A | BM834299 | EIF4A2 | chr3 | 186501436 | + | PPDPF | chr20 | 62153365 | + |
88868 | STAD | TCGA-CD-A4MH-01A | EIF4A2 | chr3 | 186505671 | + | RBMX2 | chrX | 129545322 | + |
97411 | N/A | BF338517 | EIF4A2 | chr3 | 186507655 | + | RFC4 | chr3 | 186507813 | + |
25949 | N/A | BF526915 | EIF4A2 | chr3 | 186507686 | + | RP11-114G22.1 | chr12 | 23061142 | + |
101048 | STAD | TCGA-CD-8530-01A | EIF4A2 | chr3 | 186505053 | + | SMAD6 | chr15 | 67004006 | + |
84147 | STAD | TCGA-CD-A486-01A | EIF4A2 | chr3 | 186504062 | + | SMG8 | chr17 | 57292166 | + |
25949 | N/A | AW022230 | EIF4A2 | chr3 | 186507686 | + | SPANXA2-OT1 | chrX | 140593415 | - |
92840 | N/A | DA027118 | EIF4A2 | chr3 | 186503752 | + | TGFBI | chr5 | 135364680 | + |
98632 | STAD | TCGA-EQ-8122-01A | EIF4A2 | chr3 | 186505373 | + | VIM | chr10 | 17278293 | + |
99660 | LUSC | TCGA-21-1075-01A | FGFR2 | chr10 | 123243212 | - | EIF4A2 | chr3 | 186504916 | + |
99660 | OV | TCGA-61-1900 | HSP90AA1 | chr14 | 102549370 | - | EIF4A2 | chr3 | 186504915 | + |
99660 | N/A | BQ355782 | KIAA1217 | chr10 | 24833139 | - | EIF4A2 | chr3 | 186507348 | + |
99660 | N/A | CB048230 | PTEN | chr10 | 89726688 | + | EIF4A2 | chr3 | 186507686 | - |
99660 | Non-Cancer | TCGA-A7-A0D9-11A | SORT1 | chr1 | 109859471 | - | EIF4A2 | chr3 | 186504915 | + |
99660 | OV | TCGA-25-1312-01A | ST6GAL1 | chr3 | 186769134 | + | EIF4A2 | chr3 | 186505284 | + |
99669 | STAD | TCGA-HU-A4GN-01A | XPO1 | chr2 | 61722590 | - | EIF4A2 | chr3 | 186504916 | + |
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Kaplan-Meier plots with logrank tests of overall survival (OS) |
Cancer type | Translation factor | Coefficent | Hazard ratio | Wald test pval | Likelihool ratio pval | Logrank test pval | # samples |
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Differential gene expression between female and male. (Wilcoxon test, pval<0.05) |
Cancer type | Translation factor | pval | adj.p |
LIHC | EIF4A2 | 0.00156907357154133 | 0.042 |
SARC | EIF4A2 | 0.00451761087740595 | 0.12 |
PCPG | EIF4A2 | 0.0354082367840579 | 0.89 |
HNSC | EIF4A2 | 1.30974888314952e-08 | 3.7e-07 |
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Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05) |
Cancer type | Translation factor | pval | adj.p |
LUSC | EIF4A2 | 0.00223077027635097 | 0.069 |
LGG | EIF4A2 | 0.0366293784677008 | 1 |
BRCA | EIF4A2 | 0.0131647528269764 | 0.38 |
ESCA | EIF4A2 | 0.00735827091231367 | 0.22 |
THYM | EIF4A2 | 0.000697952640371028 | 0.023 |
SARC | EIF4A2 | 0.00113644982641427 | 0.036 |
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Drugs targeting genes involved in this translation factor. (DrugBank Version 5.1.8 2021-05-08) |
UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Diseases associated with this translation factor. (DisGeNet 4.0) |
Disease ID | Disease Name | # PubMeds | Disease source |
C0001969 | Alcoholic Intoxication | 1 | PSYGENET |
C0394996 | Acute alcoholic intoxication | 1 | PSYGENET |