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Center for Computational Systems Medicine
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Gene Summary

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Translation studies in PubMed

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Exon Skipping Events

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Expression

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Expression Regulation

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Associated Genes

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Protein 3D Structure

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Protein-Protein Interaction

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Mutations

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Prognostic Analysis

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Gender Association

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Age Association

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Related Drugs

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Related Diseases

Translation Factor: GRB7 (NCBI Gene ID:2886)


Gene Summary

check button Gene Summary
Gene InformationGene Name: GRB7
Gene ID: 2886
Gene Symbol

GRB7

Gene ID

2886

Gene Namegrowth factor receptor bound protein 7
Synonyms-
Cytomap

17q12

Type of Geneprotein-coding
Descriptiongrowth factor receptor-bound protein 7B47GRB7 adapter proteinepidermal growth factor receptor GRB-7
Modification date20200313
UniProtAcc

Q14451


check button Child GO biological process term(s) under GO:0006412
GO IDGO term
GO:0017148Negative regulation of translation
GO:0006417Regulation of translation
GO:0006412Translation


check button Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneGRB7

GO:0030335

positive regulation of cell migration

10893408|12021278



check button Inferred gene age of translation factor.
GeneInferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25
GRB7(733 - 1119.25]


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Translation Studies in PubMed

check button We searched PubMed using 'GRB7[title] AND translation [title] AND human.'
GeneTitlePMID
GRB7..


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Exon Skipping Events

check buttonSkipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
For more annotations, please visit our ExonSkipDB.
all structure

check button Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ENSTExon skip start (DNA)Exon Skip end (DNA)ORF
ENST000003091563789915037899307Frame-shift
ENST000003942093789915037899307Frame-shift
ENST000003942113789915037899307Frame-shift
ENST000003091563789964537899723In-frame
ENST000003942093789964537899723In-frame
ENST000003942113789964537899723In-frame
ENST000003091563790080537900916In-frame
ENST000003942093790080537900916In-frame
ENST000003942113790080537900916In-frame
ENST000003091563790149537901576In-frame
ENST000003942093790149537901576In-frame
ENST000003942113790149537901576In-frame
ENST000003091563790167437901791In-frame
ENST000003942093790167437901791In-frame
ENST000003942113790167437901791In-frame
ENST000003091563790216537902253Frame-shift
ENST000003942093790216537902253Frame-shift
ENST000003942113790216537902253Frame-shift

check button Exon skipping position in the amino acid sequence.
ENSTExon skip start (DNA)Exon Skip end (DNA)Len(transcript seq)Exon skip start (mRNA)Exon Skip end (mRNA)Len(amino acid seq)Exon skip start (AA)Exon Skip end (AA)
ENST0000039420937899645378997231972851928532195221
ENST0000039421137899645378997232110692769532195221
ENST0000030915637899645378997232260843920532195221
ENST000003942093790080537900916197210671177532267304
ENST00000394211379008053790091621109081018532267304
ENST000003091563790080537900916226010591169532267304
ENST000003942093790149537901576197212771357532337364
ENST000003942113790149537901576211011181198532337364
ENST000003091563790149537901576226012691349532337364
ENST000003942093790167437901791197213581474532364403
ENST000003942113790167437901791211011991315532364403
ENST000003091563790167437901791226013501466532364403

check button Potentially (partially) lost protein functional features of UniProt.
UniProtAccExon skip start (AA)Exon Skip end (AA)Function feature start (AA)Function feature end (AA)Functional feature typeFunctional feature desc.


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Expression


check buttonGene expression level across TCGA pancancer
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check buttonGene expression level across GTEx pantissue
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check buttonExpression level of gene isoforms across TCGA pancancer
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check buttonExpression level of gene isoforms across GTEx pantissue
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check buttonCancer(tissue) type-specific expression level of Translation factor using z-score distriution
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check buttonDifferential expression between tumor and matched normal (in the cancer types with more than 10 matched samples)
all structure
Cancer typeTranslation factorFCadj.pval
CHOLGRB72.576845637348820.00390625
READGRB74.001217938022050.03125
KIRCGRB7-2.085572767596021.28432097821042e-12
KICHGRB7-1.358860983741961.78813934326172e-07
COADGRB71.936272284434472.98023223876954e-08


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Expression Regulation


check buttonTranslation factor expression regulation through miRNA binding
Cancer typeGenemiRNATargetScan binding score (Context++ score percentile)CoefficientPvalue


check buttonTranslation factor expression regulation through methylation in the promoter of Translation factor
all structure
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a
BLCAGRB7210.04473082078073890.2939806574300460.1818786666666670.715269992360410.010066227079264
LGGGRB7230.02164130263252260.4829772277980540.654515903054449-4.56975424737264-4.1956847290954
SKCMGRB7230.04781048056307550.4651162380790190.669439351851852-0.804220094446802-0.349431180328222

check buttonTranslation factor expression regulation through methylation in the gene body of Translation factor (positive regulation)
all structure
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a
TGCTGRB7210.04006011364306140.3292890124264230.1595433155080210.9285626098560061.18228249982576

check buttonTranslation factor expression regulation through copy number variation of Translation factor
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Cancer typeGeneCoefficientPvalue

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Associated Genes


check button Strongly correlated genes belong to cellular important gene groups with GRB7 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green)
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Cancer typeGene groupTranslation factorCorrelated geneCoefficientPvalue
CHOLCell metabolism geneGRB7AGRN0.8307248491.66E-12
CHOLCGCGRB7WNK20.8086468451.83E-11
CHOLCGCGRB7ELF30.8318115191.46E-12
CHOLCGCGRB7ERBB30.8927332311.75E-16
CHOLIUPHARGRB7WNK20.8086468451.83E-11
CHOLIUPHARGRB7CD2760.8270046042.55E-12
CHOLIUPHARGRB7ERBB30.8927332311.75E-16
CHOLKinaseGRB7WNK20.8086468451.83E-11
CHOLKinaseGRB7ERBB30.8927332311.75E-16
CHOLTFGRB7ELF30.8318115191.46E-12
CHOLTFGRB7HNF1B0.8939843521.37E-16
CHOLTSGGRB7WNK20.8086468451.83E-11
CHOLTSGGRB7CTDSPL0.8088668211.79E-11
CHOLTSGGRB7KRT190.8170241357.65E-12
CHOLTSGGRB7RAB250.823723293.68E-12
CHOLTSGGRB7DCDC20.8375897417.33E-13
TGCTCell metabolism geneGRB7HCCS0.8039823891.37E-36
TGCTCell metabolism geneGRB7DNMT3B0.8106420141.26E-37
TGCTCell metabolism geneGRB7PSMD110.8208034982.74E-39
TGCTCell metabolism geneGRB7PSMD30.8370378733.56E-42
TGCTEpifactorGRB7DNMT3B0.8106420141.26E-37
TGCTTSGGRB7DNMT3B0.8106420141.26E-37
TGCTTSGGRB7PHB0.8262560983.18E-40
THCACell metabolism geneGRB7ALDH3B10.8024074296.79E-130
THCACell metabolism geneGRB7PROS10.817715287.75E-139
THCACell metabolism geneGRB7PLCD30.8422169064.65E-155
THCACell metabolism geneGRB7SDC40.8459557998.87E-158
THCACGCGRB7FSTL30.8143127278.88E-137
THCACGCGRB7ELF30.819527525.96E-140
THCACGCGRB7SLC34A20.820651411.20E-140
THCACGCGRB7ERBB30.8217240892.56E-141
THCACGCGRB7SDC40.8459557998.87E-158
THCAIUPHARGRB7GABRB20.8097047934.68E-134
THCAIUPHARGRB7PTPRE0.8099707913.27E-134
THCAIUPHARGRB7SLC34A20.820651411.20E-140
THCAIUPHARGRB7RARG0.8207809579.93E-141
THCAIUPHARGRB7KCNQ30.8210125657.12E-141
THCAIUPHARGRB7ERBB30.8217240892.56E-141
THCAIUPHARGRB7GJB30.8235805281.73E-142
THCAIUPHARGRB7TACSTD20.8367593423.25E-151
THCAIUPHARGRB7EPHB30.8399571151.89E-153
THCAIUPHARGRB7PLCD30.8422169064.65E-155
THCAIUPHARGRB7ITGA30.8482398121.78E-159
THCAIUPHARGRB7NOD10.849214553.30E-160
THCAIUPHARGRB7TMPRSS60.8659408771.18E-173
THCAKinaseGRB7ERBB30.8217240892.56E-141
THCAKinaseGRB7EPHB30.8399571151.89E-153
THCATFGRB7ELF30.819527525.96E-140
THCATFGRB7RARG0.8207809579.93E-141
THCATSGGRB7CAMK2N10.8078724475.39E-133
THCATSGGRB7PPP1R1B0.8079455424.90E-133
THCATSGGRB7KRT190.8121846661.64E-135
THCATSGGRB7PDLIM40.8289155126.24E-146
THCATSGGRB7EPHB30.8399571151.89E-153
THCATSGGRB7TMPRSS60.8659408771.18E-173
THYMTSGGRB7JUP0.8062651493.91E-29
UCSTSGGRB7JUP0.8062651493.91E-29


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Protein structure


check button Protein 3D structure
Visit iCn3D.


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Protein-Protein Interaction


check button Protein-protein interaction networks
* Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure

check buttonOverlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure
check button
* Edge colors based on TCGA cancer types.

check button* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P))
all structure
Cancer typeTranslation factorInteracting protein coding geneFCadj.pval
LUSCGRB7EGFR1.327571383914170.000102202753672845
LIHCGRB7FHL21.62513383581690.000209845686767642
KICHGRB7ERBB33.305391243945380.0014527440071106
ESCAGRB7SRC1.00773005241180.001953125
BLCAGRB7PTK2-1.242448524344560.00239944458007812
LIHCGRB7EGFR-1.22305380940170.00496795806084514
KIRPGRB7ERBB31.056739202662830.00571200484409928
STADGRB7ERBB22.083087823184470.00733334058895707
CHOLGRB7PTK2-2.092856793367480.0078125
ESCAGRB7TEK-4.626608421275010.013671875
BLCAGRB7ERBB21.709862938204280.014068603515625
CHOLGRB7ERBB31.570102984286290.02734375
LUADGRB7RET-2.173839206377240.0278902380223951
KIRPGRB7EGFR1.140563999273750.0394268441013992
STADGRB7EPHB1-5.212698733841790.0394268441013992
HNSCGRB7CAV11.965168547228051.49520951708837e-06
PRADGRB7ERBB31.15948212131781.5966396741243e-08
LIHCGRB7PTK2-1.875353256485842.06383403084721e-07
LUADGRB7EPHB1-2.939227590937942.0741790728873e-06
PRADGRB7FHL2-1.829795614679332.19100533620049e-08
KIRCGRB7EGFR1.558363839377992.25998111659284e-12
BRCAGRB7ERBB32.281056201926882.73353544828495e-13
LUADGRB7CAV1-3.062945843004313.59849856594825e-11
LUADGRB7TEK-3.063501245322683.59910232594763e-11
KIRCGRB7ERBB31.539161101577283.91927479910437e-06
THCAGRB7EPHB1-2.551783215277364.09207132288577e-11
KIRPGRB7RET2.481554956334.09781932830811e-08
BRCAGRB7TEK-1.66322494831294.10483912789294e-23
BRCAGRB7ERBB22.103790749033244.64802044953281e-07
KIRCGRB7RET4.564982061644074.81926317698848e-12
THCAGRB7ERBB21.027939272664445.71717197842929e-07
KICHGRB7TEK-2.302918838295465.96046447753906e-08
STADGRB7SRC1.292685902678356.0301274061203e-05
BRCAGRB7RET1.292622158160036.3625505327664e-11
KICHGRB7ERBB2-2.136180344105396.55651092529297e-06
BRCAGRB7SRC-1.013896088457997.35163663752073e-11
STADGRB7PTK2-3.291317098867528.74791294336319e-06
THCAGRB7ERBB3-1.824489092462898.9058794211314e-08
LUADGRB7ERBB21.650461206677288.94245335020896e-05
HNSCGRB7ERBB2-3.649383757733939.1349647846073e-09
LUSCGRB7CAV1-2.616931645642859.58407745365481e-10


check button Protein-protein interactors with this translation factor (BIOGRID-3.4.160)
PPI interactors with GRB7
SFN, LY6G6F, ERBB3, KIT, RND1, RET, ERBB2, PTK2, EPHB1, INSR, NPM1, RPS2, ZBTB16, A1BG, ATP5B, CPNE6, PKM, DYNC1I1, AGAP1, GNB2, TMSB4X, PDHB, FLAD1, DOCK7, MSH2, HADHB, TLE1, KMT2B, FGB, PHAX, SETDB1, CALM1, LAX1, TRIM36, KCTD6, OLIG1, ZNHIT1, GIGYF1, GIGYF2, PDGFRB, SHC1, USP2, PICK1, TGM5, FAM124B, FCHO1, TCF12, TRIM43, CREBRF, STAC3, RSL1D1, MRPS7, MRPS34, MRPS14, RPL6, RPL39P5, RPL39, RPL12, NOC2L, MRPS2, C19orf53, RPF2, MRPS26, RIOK2, C1orf35, PURB, MRPS24, MRPS27, BRIX1, RPP25L, MCAT, MINA, RPL19, MRPS21, MRPS5, MRPS35, MRPS10, RPL32, RPL31, POLR2L, RPL23A, RPL35, NEMF, RIOK3, RPL18, RPL37A, RPL27, RPL15, RPL14, RPL13A, RPL4, RPL10L, RPL10, RPL35A, GRB7, AR, MET, EGFR, ERBB4, FARSA, HDAC2, RBM10, LTV1, PPIL4, STAU1, PTBP1, G3BP2, PSMD3, LUC7L3, CCT7, RPN1, HNRNPM, RBM14-RBM4, RBM14, EIF4B, SDHA, PUF60, HSPA8, CAPRIN1,


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Mutations


check button Clinically associated variants from ClinVar.
GeneChrPositionRefSeqVarSeqRefSeeqVarTypePathogenicDiseaseVarInfo
GRB7chr1737899147GAsingle_nucleotide_variantBenignnot_providedSO:0001627|intron_variantSO:0001627|intron_variant
GRB7chr1737899452CTsingle_nucleotide_variantBenignnot_providedSO:0001819|synonymous_variantSO:0001819|synonymous_variant
GRB7chr1737900387GAsingle_nucleotide_variantUncertain_significanceHigh_myopiaSO:0001583|missense_variantSO:0001583|missense_variant
GRB7chr1737900864CTsingle_nucleotide_variantBenignnot_providedSO:0001583|missense_variantSO:0001583|missense_variant
GRB7chr1737901569CTsingle_nucleotide_variantBenignnot_providedSO:0001583|missense_variantSO:0001583|missense_variant
GRB7chr1737901977AGsingle_nucleotide_variantBenignnot_providedSO:0001627|intron_variantSO:0001627|intron_variant
GRB7chr1737902027CAsingle_nucleotide_variantBenignnot_providedSO:0001583|missense_variantSO:0001583|missense_variant


check button nsSNVs with sample frequency (size of circle) from TCGA 33 cancers.
all structure


check button SNVs and Indels
GeneCancer typeChromosomeStartEndRefSeeqMutSeqMutation typeAAchange# samples
GRB7SKCMchr173789885237898852CTSilentp.S63S8
GRB7SKCMchr173789888037898880GAMissense_Mutationp.E73K3
GRB7HNSCchr173789947037899470GTSilentp.V167V3
GRB7STADchr173790117337901173GAMissense_Mutationp.R316Q3
GRB7BRCAchr173789882737898827GAMissense_Mutationp.R55Q3
GRB7BRCAchr173789923637899236TAMissense_Mutationp.L131Q3
GRB7BRCAchr173789925337899253GAMissense_Mutationp.A137T3
GRB7SKCMchr173789885137898851CTMissense_Mutationp.S63F3
GRB7UCECchr173789922337899223GAMissense_Mutationp.V127M3
GRB7ESCAchr173789891137898911TAMissense_Mutation2
GRB7SARCchr173789924337899243GTMissense_Mutation2
GRB7BLCAchr173790155437901554CGMissense_Mutationp.S357C2
GRB7UCECchr173790033937900339GAMissense_Mutationp.G227D2
GRB7KIRPchr173789858837898588AGMissense_Mutationp.S12G2
GRB7SKCMchr173790219137902191CTSilentp.F432F2
GRB7ESCAchr173789892837898928ACMissense_Mutation2
GRB7UCECchr173790153037901531CA-Frame_Shift_Delp.Q350fs2
GRB7SKCMchr173790170137901701GASilentp.V373V2
GRB7BRCAchr173789867437898674GCMissense_Mutationp.K40N2
GRB7HNSCchr173789890937898909ACSilent2
GRB7UCECchr173790153937901539GAMissense_Mutationp.R352H2
GRB7CHOLchr173789954537899545GTMissense_Mutation2
GRB7SKCMchr173789859637898596GASilentp.P14P2
GRB7PAADchr173790122737901227GAMissense_Mutationp.R334H2
GRB7SKCMchr173789920737899207TASilentp.G121G2
GRB7BRCAchr173789922937899229GCMissense_Mutationp.E129Q2
GRB7SKCMchr173790220437902204TCMissense_Mutationp.S437P2
GRB7PAADchr173789953337899533CTSilentp.Y188Y2
GRB7SKCMchr173789951537899515GASilentp.R182R2
GRB7HNSCchr173790045637900456CAMissense_Mutationp.S266Y2
GRB7SKCMchr173790084237900842GAMissense_Mutationp.E280K2
GRB7UCSchr173789952437899524CTSilentp.F185F2
GRB7SKCMchr173790172737901727GAMissense_Mutationp.G382E2
GRB7PAADchr173790091337900913CASilent2
GRB7ESCAchr173789891137898911TAMissense_Mutationp.I106N2
GRB7LIHCchr173790243737902437GTMissense_Mutation2
GRB7SKCMchr173789950637899506CTSilentp.F179F2
GRB7CESCchr173789965037899650CAMissense_Mutation2
GRB7KICHchr173790040137900401CTMissense_Mutationp.R248C2
GRB7SKCMchr173789971737899717CTSilentp.L219L2
GRB7ESCAchr173789892837898928ACMissense_Mutationp.S112R2
GRB7LIHCchr173790225237902252GTMissense_Mutation2
GRB7STADchr173790117337901173GAMissense_Mutation2
GRB7CESCchr173789968537899685GAMissense_Mutation2
GRB7SKCMchr173789892137898921CTSilentp.G86G2
GRB7THCAchr173790156637901566CTMissense_Mutationp.S361F2
GRB7PRADchr173789889137898891TGMissense_Mutationp.S76R2
GRB7BLCAchr173789952437899524CAMissense_Mutation2
GRB7CESCchr173790173837901738GAMissense_Mutation2
GRB7KIRPchr173789858837898588AGMissense_Mutationp.S35G2
GRB7PAADchr173789953337899533CTSilent2
GRB7BLCAchr173790123437901234CTSilentp.F336F2
GRB7SKCMchr173790157137901571CTMissense_Mutationp.P363S1
GRB7LIHCchr173790243737902437GTMissense_Mutationp.K478N1
GRB7PAADchr173790122737901227GAMissense_Mutation1
GRB7STADchr173790087337900873GAMissense_Mutationp.R313H1
GRB7STADchr173790045437900454CASilentp.T265T1
GRB7HNSCchr173790174737901747CTMissense_Mutation1
GRB7CESCchr173789968537899685GAMissense_Mutationp.D232N1
GRB7LUADchr173790240737902407CTMissense_Mutationp.S439F1
GRB7PAADchr173789953337899533CTSilentp.Y211Y1
GRB7SKCMchr173789881937898819GASplice_Sitep.R52_splice1
GRB7LIHCchr173790045237900452A-Frame_Shift_Delp.T265fs1
GRB7SARCchr173790313537903135GTSilent1
GRB7STADchr173789861137898611AGSilentp.P19P1
GRB7BLCAchr173789886737898867CTSilentp.P68P1
GRB7HNSCchr173789947037899470GTSilent1
GRB7CESCchr173790173837901738GAMissense_Mutationp.E409K1
GRB7KIRPchr173789858837898588AGMissense_Mutation1
GRB7LUADchr173790308737903087CTSilentp.H512H1
GRB7PAADchr173790122737901227GAMissense_Mutationp.R357H1
GRB7SKCMchr173790239337902393CTMissense_Mutationp.P464S1
GRB7STADchr173790045437900454CASilentp.T288T1
GRB7ESCAchr173789891137898911TAMissense_Mutationp.I83N1
GRB7LIHCchr173789966237899662A-Frame_Shift_Delp.E201fs1
GRB7STADchr173789917237899172GAMissense_Mutationp.D110N1
GRB7LGGchr173790240837902408CTMissense_Mutationp.L469F1
GRB7LUADchr173790203437902034CTSilentp.L421L1
GRB7SKCMchr173789884837898848CTMissense_Mutationp.T62I1
GRB7STADchr173789882837898828ATSilentp.R78R1
GRB7ESCAchr173789892837898928ACMissense_Mutationp.S89R1
GRB7LIHCchr173790149937901499G-Frame_Shift_Delp.G339fs1
GRB7LIHCchr173789951637899516A-Frame_Shift_Delp.K183fs1
GRB7TGCTchr173790119637901196CTNonsense_Mutationp.Q347X1
GRB7UCSchr173789914737899147GASilent1
GRB7CHOLchr173789954537899545GTMissense_Mutationp.K215N1
GRB7LGGchr173790169637901696CAMissense_Mutationp.L372M1
GRB7LUADchr173790153837901538CTMissense_Mutationp.R352C1
GRB7SKCMchr173789951237899512CTSilentp.F181F1
GRB7ESCAchr173790240637902407-CFrame_Shift_Insp.A468fs1
GRB7LIHCchr173789860437898604T-Frame_Shift_Delp.L17fs1
GRB7TGCTchr173790119637901196CTNonsense_Mutationp.Q324*1
GRB7UCSchr173789952437899524CTSilentp.F208F1
GRB7COADchr173789857737898577CTMissense_Mutationp.P8L1
GRB7LGGchr173789915237899152TCSplice_Sitep.V103_splice1
GRB7LUADchr173789895837898958ATMissense_Mutationp.S99C1
GRB7SKCMchr173789894337898943CTMissense_Mutationp.L94F1
GRB7PAADchr173789921837899218GAMissense_Mutationp.R125H1
GRB7SKCMchr173789951337899513CTMissense_Mutationp.R182W1
GRB7STADchr173790087337900873GAMissense_Mutationp.R290H1
GRB7GBMchr173790219437902194CAMissense_Mutationp.H433Q1
GRB7LIHCchr173789971437899714C-Frame_Shift_Delp.D218fs1
GRB7TGCTchr173790119637901196CTNonsense_Mutation1
GRB7HNSCchr173790174737901747CTMissense_Mutationp.R389W1
GRB7COADchr173790087437900874CTSilentp.R290R1
GRB7LGGchr173790240837902408CTMissense_Mutation1
GRB7LUADchr173790037537900375GTMissense_Mutationp.R239L1
GRB7SKCMchr173789860037898600GAMissense_Mutationp.D16N1
GRB7STADchr173790085137900851GAMissense_Mutationp.V283M1
GRB7BLCAchr173790155437901554CGMissense_Mutation1
GRB7GBMchr173790116537901165GCMissense_Mutationp.K313N1
GRB7LIHCchr173790217837902178C-Frame_Shift_Delp.T428fs1
GRB7SKCMchr173789881937898819GASilentp.R52R1
GRB7THCAchr173789863937898639CASilent1
GRB7KICHchr173790040137900401CTMissense_Mutation1
GRB7LUADchr173790043537900435AGMissense_Mutationp.Y259C1
GRB7PRADchr173789889137898891TGMissense_Mutationp.S99R1
GRB7SKCMchr173790301237903012GASilentp.E487E1
GRB7STADchr173790201237902012TCMissense_Mutationp.M414T1
GRB7BLCAchr173790123437901234CTSilent1
GRB7GBMchr173790307637903076GAMissense_Mutation1
GRB7LUADchr173790313837903138GASilentp.R529R1
GRB7THCAchr173790156637901566CTMissense_Mutation1
GRB7OVchr173790312137903121CTMissense_Mutationp.R524C1
GRB7SKCMchr173789924537899245GAMissense_Mutationp.R134Q1
GRB7PRADchr173790300537903005GASplice_Sitep.S485_splice1
GRB7STADchr173790204137902041GAMissense_Mutationp.A424T1
GRB7BLCAchr173790035237900352GCMissense_Mutation1
GRB7GBMchr173790116537901165GCMissense_Mutation1
GRB7KIRCchr173789955237899552CTMissense_Mutationp.P218S1
GRB7LUADchr173790036537900365CGMissense_Mutationp.L236V1
GRB7ESCAchr173790240637902407-CFrame_Shift_Insp.L492fs1
GRB7LIHCchr173790170837901708GAMissense_Mutationp.D399N1
GRB7PAADchr173789921837899218GAMissense_Mutation1
GRB7SKCMchr173789852637898526CTMissense_Mutationp.S14F1
GRB7STADchr173790117337901173GAMissense_Mutationp.R339Q1
GRB7STADchr173789882837898828ATSilentp.R55R1
GRB7GBMchr173790217537902175GAMissense_Mutation1
GRB7LUADchr173789863937898639CTMissense_Mutationp.R29W1
GRB7ESCAchr173790034737900347CTMissense_Mutation1
GRB7LIHCchr173790121137901211TCMissense_Mutationp.W352R1
GRB7SKCMchr173790303637903036GAMissense_Mutationp.M495I1
GRB7PRADchr173790300537903005GASplice_Sitep.S485N1
GRB7STADchr173789861137898611AGSilentp.P42P1
GRB7STADchr173790169737901697TCMissense_Mutationp.L372P1
GRB7HNSCchr173790045637900456CAMissense_Mutation1
GRB7CESCchr173789965037899650CAMissense_Mutationp.S220Y1
GRB7KIRPchr173790300237903002ACSplice_Site.1
GRB7LUADchr173789890737898907CTMissense_Mutationp.P82S1
GRB7UCECchr173790153037901531CA-Frame_Shift_Delp.A349fs1

check buttonCopy number variation (CNV) of GRB7
* Click on the image to open the original image in a new window.
all structure

check buttonFusion gene breakpoints (product of the structural variants (SVs)) across GRB7
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


check button Fusion genes with this translation factor from FusionGDB2.0.
FusionGDB2 IDDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
99269LUSCTCGA-60-2715FBXL20chr1737557613-GRB7chr1737898504+
99269LUSCTCGA-60-2715-01AFBXL20chr1737558426-GRB7chr1737898505+
99269READTCGA-AF-A56LFBXL20chr1737557614-GRB7chr1737898505+
101356BLCATCGA-HQ-A2OF-01AGRB7chr1737902455+ACACAchr1735567404-
79881BRCATCGA-BH-A1EN-01AGRB7chr1737902455+ACTN3chr1166318710+
97709BRCATCGA-AR-A0TQ-01AGRB7chr1737902041+BRIP1chr1759934592-
34681BLCATCGA-XF-A9SK-01AGRB7chr1737901237+CD300Echr1772610172-
99264OVTCGA-61-1736-01BGRB7chr1737894386+CDK12chr1737721013+
99264READTCGA-AF-A56L-01AGRB7chr1737902455+CDK12chr1737700502+
99264STADTCGA-CG-4449GRB7chr1737902455+CDK12chr1737680926+
99264STADTCGA-CG-4449-01AGRB7chr1737902455+CDK12chr1737680927+
101608BLCATCGA-GU-AATPGRB7chr1737894386+ERBB2chr1737844949+
101608BRCATCGA-C8-A1HK-01AGRB7chr1737902253+ERBB2chr1737883942+
101608CESCTCGA-C5-A1M9-01AGRB7chr1737902455+ERBB2chr1737849514+
101608CESCTCGA-LP-A5U3-01AGRB7chr1737897160+ERBB2chr1737879791+
101608CESCTCGA-LP-A5U3-01AGRB7chr1737898709+ERBB2chr1737855790+
101608CESCTCGA-LP-A5U3-01AGRB7chr1737898709+ERBB2chr1737863243+
101608CESCTCGA-VS-A9V5GRB7chr1737894386+ERBB2chr1737886276+
101608CESCTCGA-VS-A9V5GRB7chr1737894645+ERBB2chr1737886276+
100675N/ADL050887GRB7chr1737903538+FBXL17chr5107440884-
103189READTCGA-EI-6509GRB7chr1737894645+IKZF3chr1737988404-
103189STADTCGA-D7-8573GRB7chr1737894386+IKZF3chr1737949186-
103189STADTCGA-FP-7735-01AGRB7chr1737898986+IKZF3chr1737921231-
97711BRCATCGA-A2-A0CX-01AGRB7chr1737900460+ITGB3chr1745351785+
98049STADTCGA-CG-4466GRB7chr1737894645+KRT222chr1738816459-
98049STADTCGA-CG-4466-01AGRB7chr1737894386+KRT222chr1738816459-
34681STADTCGA-D7-8573GRB7chr1737900916+KRT25chr1738906849-
41073STADTCGA-D7-8573GRB7chr1737900916+KRT27chr1738933984-
41073STADTCGA-D7-8573-01AGRB7chr1737900916+KRT27chr1738950298-
34681BRCATCGA-AO-A12C-01AGRB7chr1737894645+KRT35chr1739637007-
97197ESCATCGA-2H-A9GFGRB7chr1737898709+MIEN1chr1737886544-
97197ESCATCGA-M9-A5M8GRB7chr1737894386+MIEN1chr1737886544-
97197ESCATCGA-M9-A5M8GRB7chr1737894645+MIEN1chr1737886544-
97197STADTCGA-EQ-8122-01AGRB7chr1737898541+MIEN1chr1737886516-
99077BRCATCGA-A8-A09IGRB7chr1737894645+PGAP3chr1737830932-
99077BRCATCGA-A8-A09I-01AGRB7chr1737894386+PGAP3chr1737830932-
99077BRCATCGA-BH-A202GRB7chr1737898709+PGAP3chr1737842272-
99077BRCATCGA-BH-A202GRB7chr1737898969+PGAP3chr1737842272-
99077BRCATCGA-BH-A202GRB7chr1737899307+PGAP3chr1737842272-
99077BRCATCGA-BH-A202-01AGRB7chr1737898708+PGAP3chr1737842271-
99077BRCATCGA-BH-A202-01AGRB7chr1737898968+PGAP3chr1737842271-
99077BRCATCGA-BH-A202-01AGRB7chr1737899306+PGAP3chr1737842271-
99077ESCATCGA-R6-A8W5GRB7chr1737902455+PGAP3chr1737830932-
99665ESCATCGA-L5-A88VGRB7chr1737894386+PIP4K2Bchr1736927525-
99665ESCATCGA-L5-A88VGRB7chr1737894645+PIP4K2Bchr1736927525-
99665ESCATCGA-L5-A88VGRB7chr1737898709+PIP4K2Bchr1736927525-
99665ESCATCGA-L5-A88VGRB7chr1737899307+PIP4K2Bchr1736927525-
99665ESCATCGA-L5-A88V-01AGRB7chr1737898969+PIP4K2Bchr1736927525-
88698BLCATCGA-CU-A0YR-01AGRB7chr1737900460+PLXDC1chr1737224212-
99282STADTCGA-EQ-8122-01AGRB7chr1737902455+PSMD3chr1738144936+
96982BRCATCGA-AR-A24U-01AGRB7chr1737899723+SAMHD1chr2035547922-
99287CESCTCGA-Q1-A73RGRB7chr1737894645+STARD3chr1737813260+
99287CESCTCGA-Q1-A73R-01AGRB7chr1737894645+STARD3chr1737813261+
99287STADTCGA-BR-7901GRB7chr1737894645+STARD3chr1737809733+
76256STADTCGA-BR-A4PE-01AGRB7chr1737895013+TCAPchr1737822070+
93090STADTCGA-BR-A4PE-01AGRB7chr1737894386+TOP2Achr1738548989-
99295STADTCGA-BR-8381GRB7chr1737894645+WIPF2chr1738430041+
99295STADTCGA-BR-8483GRB7chr1737894386+WIPF2chr1738430041+
99295STADTCGA-BR-8483GRB7chr1737894386+WIPF2chr1738433334+
99295STADTCGA-BR-8483-01AGRB7chr1737894386+WIPF2chr1738430042+
99295STADTCGA-BR-8483-01AGRB7chr1737894645+WIPF2chr1738430042+
99295STADTCGA-EQ-8122GRB7chr1737902455+WIPF2chr1738420741+
99295STADTCGA-EQ-8122-01AGRB7chr1737902455+WIPF2chr1738420742+
99269STADTCGA-CG-4466-01AKAT6Achr841905896-GRB7chr1737898505+
99269OVTCGA-09-1659LAMA5chr2060907427-GRB7chr1737903003+
99269STADTCGA-BR-8486-01AMED1chr1737607291-GRB7chr1737898505+
99269STADTCGA-BR-A4PEMIEN1chr1737885937-GRB7chr1737898504+
99269STADTCGA-BR-A4PE-01AMIEN1chr1737885938-GRB7chr1737898505+
99269UCECTCGA-D1-A16S-01AMSL1chr1738282659+GRB7chr1737898505+
99269LUSCTCGA-56-A4BXPGAP3chr1737844087-GRB7chr1737898505+
99269UCECTCGA-EY-A3QX-01APPP1R1Bchr1737791979+GRB7chr1737898505+
99269STADTCGA-HU-8604RPL41chr1256510583+GRB7chr1737898504+
99269BRCATCGA-E2-A1LESTARD3chr1737793484+GRB7chr1737898504+
99269BRCATCGA-E2-A1LE-01ASTARD3chr1737793484+GRB7chr1737898505+
99269UCECTCGA-EY-A3QX-01ASTARD3chr1737793483+GRB7chr1737898504+
99298BRCATCGA-C8-A132-01AWIPF2chr1738375744+GRB7chr1737901139+


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Prognostic Analysis


check button Kaplan-Meier plots with logrank tests of overall survival (OS)
all structure
Cancer typeTranslation factorCoefficentHazard ratioWald test pvalLikelihool ratio pvalLogrank test pval# samples


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Translation factor and Gender


check button Differential gene expression between female and male. (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
HNSCGRB70.001413136077823470.04
STADGRB70.002379622543454710.064
LIHCGRB70.008490127595285670.22
SARCGRB70.03034871882041060.76
LGGGRB70.03300762884350390.79
COADGRB70.04263905734699710.98

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Translation factor and Age


check button Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
LGGGRB70.001416304671034850.047
LAMLGRB70.04798487721509281
PRADGRB70.0134596708695310.42
UCSGRB70.02410552246980560.72
THYMGRB70.004249653230365720.14
READGRB70.03990268044831361

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Related Drugs


check button Drugs targeting genes involved in this translation factor.
(DrugBank Version 5.1.8 2021-05-08)
UniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases


check button Diseases associated with this translation factor.
(DisGeNet 4.0)
Disease IDDisease Name# PubMedsDisease source
C0006142Malignant neoplasm of breast2CTD_human
C0678222Breast Carcinoma2CTD_human
C1257931Mammary Neoplasms, Human2CTD_human
C4704874Mammary Carcinoma, Human2CTD_human
C0007134Renal Cell Carcinoma1CTD_human
C0205641Adenocarcinoma, Basal Cell1CTD_human
C0205642Adenocarcinoma, Oxyphilic1CTD_human
C0205643Carcinoma, Cribriform1CTD_human
C0205644Carcinoma, Granular Cell1CTD_human
C0205645Adenocarcinoma, Tubular1CTD_human
C0242379Malignant neoplasm of lung1CTD_human
C0279702Conventional (Clear Cell) Renal Cell Carcinoma1CTD_human
C0376358Malignant neoplasm of prostate1CTD_human
C1266042Chromophobe Renal Cell Carcinoma1CTD_human
C1266043Sarcomatoid Renal Cell Carcinoma1CTD_human
C1266044Collecting Duct Carcinoma of the Kidney1CTD_human
C1306837Papillary Renal Cell Carcinoma1CTD_human