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Center for Computational Systems Medicine
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Gene Summary

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Translation studies in PubMed

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Exon Skipping Events

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Expression

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Expression Regulation

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Associated Genes

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Protein 3D Structure

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Protein-Protein Interaction

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Mutations

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Prognostic Analysis

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Gender Association

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Age Association

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Related Drugs

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Related Diseases

Translation Factor: PA2G4 (NCBI Gene ID:5036)


Gene Summary

check button Gene Summary
Gene InformationGene Name: PA2G4
Gene ID: 5036
Gene Symbol

PA2G4

Gene ID

5036

Gene Nameproliferation-associated 2G4
SynonymsEBP1|HG4-1|p38-2G4
Cytomap

12q13.2

Type of Geneprotein-coding
Descriptionproliferation-associated protein 2G4ErbB-3 binding protein 1ErbB3-binding protein Ebp1cell cycle protein p38-2G4 homologerbB3-binding protein 1proliferation-associated 2G4, 38kDproliferation-associated 2G4, 38kDa
Modification date20200313
UniProtAcc

Q9UQ80


check button Child GO biological process term(s) under GO:0006412
GO IDGO term
GO:0006417Regulation of translation
GO:0006412Translation


check button Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgenePA2G4

GO:0045892

negative regulation of transcription, DNA-templated

15073182



check button Inferred gene age of translation factor.
GeneInferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25


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Translation Studies in PubMed

check button We searched PubMed using 'PA2G4[title] AND translation [title] AND human.'
GeneTitlePMID
PA2G4..


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Exon Skipping Events

check buttonSkipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
For more annotations, please visit our ExonSkipDB.
all structure

check button Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ENSTExon skip start (DNA)Exon Skip end (DNA)ORF
ENST000003033055650525956505313In-frame

check button Exon skipping position in the amino acid sequence.
ENSTExon skip start (DNA)Exon Skip end (DNA)Len(transcript seq)Exon skip start (mRNA)Exon Skip end (mRNA)Len(amino acid seq)Exon skip start (AA)Exon Skip end (AA)

check button Potentially (partially) lost protein functional features of UniProt.
UniProtAccExon skip start (AA)Exon Skip end (AA)Function feature start (AA)Function feature end (AA)Functional feature typeFunctional feature desc.


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Expression


check buttonGene expression level across TCGA pancancer
all structure

check buttonGene expression level across GTEx pantissue
all structure

check buttonExpression level of gene isoforms across TCGA pancancer
all structure

check buttonExpression level of gene isoforms across GTEx pantissue
all structure

check buttonCancer(tissue) type-specific expression level of Translation factor using z-score distriution
all structure

check buttonDifferential expression between tumor and matched normal (in the cancer types with more than 10 matched samples)
all structure
Cancer typeTranslation factorFCadj.pval
PRADPA2G4-1.395258214652270.000305145157975212
BRCAPA2G4-1.290917667077020.000664421590817696
LIHCPA2G4-2.119663552139651.52957264107439e-06
LUADPA2G4-1.779164856746172.04592776341023e-07
KIRCPA2G4-1.187937428239042.15831756070263e-10
KIRPPA2G4-1.715818400251242.49594449996948e-07
STADPA2G4-2.254487804223986.68526627123356e-05


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Expression Regulation


check buttonTranslation factor expression regulation through miRNA binding
Cancer typeGenemiRNATargetScan binding score (Context++ score percentile)CoefficientPvalue
PCPGPA2G4hsa-miR-223-3p73-0.3258276533592990.00353146501612761


check buttonTranslation factor expression regulation through methylation in the promoter of Translation factor
all structure
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a
LIHCPA2G4210.02373950614180530.2158805344889850.180041310541311-0.646959035498517-0.539436532890182
MESOPA2G4210.01083613772184070.2061078787878790.1785732456140350.5172732735072910.141276503172518

check buttonTranslation factor expression regulation through methylation in the gene body of Translation factor (positive regulation)
all structure
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a

check buttonTranslation factor expression regulation through copy number variation of Translation factor
all structure
Cancer typeGeneCoefficientPvalue
READPA2G40.1714317940.001392133
GBMPA2G40.3205548730.012450356

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Associated Genes


check button Strongly correlated genes belong to cellular important gene groups with PA2G4 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green)
all structure
Cancer typeGene groupTranslation factorCorrelated geneCoefficientPvalue
COADCell metabolism genePA2G4HSPD10.8017803424.27E-75
COADCell metabolism genePA2G4NME10.8061066751.70E-76
COADCell metabolism genePA2G4NUP370.8270238748.55E-84
COADCell metabolism genePA2G4CCT20.8576495321.82E-96
COADCell metabolism genePA2G4SNRPF0.8635640512.95E-99
COADCGCPA2G4CDK40.8309661012.79E-85
COADIUPHARPA2G4CDK40.8309661012.79E-85
COADKinasePA2G4CDK40.8309661012.79E-85
COADTSGPA2G4HSPD10.8017803424.27E-75
COADTSGPA2G4NME10.8061066751.70E-76
DLBCCell metabolism genePA2G4EXOSC20.814382781.91E-12
DLBCCell metabolism genePA2G4CCT20.8227727717.27E-13
DLBCCell metabolism genePA2G4NOP560.8265159894.65E-13
DLBCEpifactorPA2G4EXOSC20.814382781.91E-12
LAMLCell metabolism genePA2G4NME10.803080022.69E-40
LAMLCGCPA2G4CDK40.818640634.83E-43
LAMLIUPHARPA2G4CDK40.818640634.83E-43
LAMLKinasePA2G4CDK40.818640634.83E-43
LAMLTSGPA2G4NME10.803080022.69E-40
READCell metabolism genePA2G4SNRPF0.8463555446.11E-30
READCGCPA2G4CDK40.831790914.39E-28
READIUPHARPA2G4CDK40.831790914.39E-28
READKinasePA2G4CDK40.831790914.39E-28
TGCTCell metabolism genePA2G4TUBA1C0.808046113.23E-37
TGCTCell metabolism genePA2G4NME10.8158175031.85E-38
TGCTCell metabolism genePA2G4TIMM440.8217794311.88E-39
TGCTCell metabolism genePA2G4TIMM500.8279156611.63E-40
TGCTCell metabolism genePA2G4SNRPD10.8355469376.75E-42
TGCTCell metabolism genePA2G4PFDN40.8356627316.43E-42
TGCTCell metabolism genePA2G4TOMM400.8387198591.71E-42
TGCTCell metabolism genePA2G4PSMC40.8553418197.75E-46
TGCTCell metabolism genePA2G4SNRPF0.8708337552.35E-49
TGCTEpifactorPA2G4DNAJC20.804163291.29E-36
TGCTIUPHARPA2G4PPIA0.8038145651.46E-36
TGCTTSGPA2G4NME10.8158175031.85E-38
THYMCell metabolism genePA2G4EXOSC50.8011005741.61E-28
THYMCell metabolism genePA2G4TIMM17B0.8023431891.15E-28
THYMCell metabolism genePA2G4TKT0.8061437954.05E-29
THYMCell metabolism genePA2G4PSME10.8062188733.96E-29
THYMCell metabolism genePA2G4SNRPG0.8084251172.14E-29
THYMCell metabolism genePA2G4POLR2H0.8100840331.34E-29
THYMCell metabolism genePA2G4GNA150.8131682815.53E-30
THYMCell metabolism genePA2G4ZNRD10.8138803834.50E-30
THYMCell metabolism genePA2G4TXN0.8181488871.28E-30
THYMCell metabolism genePA2G4ANP32A0.8186196761.11E-30
THYMCell metabolism genePA2G4SNRPE0.8193654568.90E-31
THYMCell metabolism genePA2G4TIMM130.8196896458.08E-31
THYMCell metabolism genePA2G4DUT0.8200541597.24E-31
THYMCell metabolism genePA2G4PHKG20.8218256054.23E-31
THYMCell metabolism genePA2G4POLD20.8227034463.23E-31
THYMCell metabolism genePA2G4NME10.8237721942.33E-31
THYMCell metabolism genePA2G4EXOSC10.8245143031.85E-31
THYMCell metabolism genePA2G4ACOT80.8249352071.62E-31
THYMCell metabolism genePA2G4LSM30.8285343565.23E-32
THYMCell metabolism genePA2G4POLD10.8289938224.52E-32
THYMCell metabolism genePA2G4PSMA50.8297769973.51E-32
THYMCell metabolism genePA2G4GALK10.8357629614.96E-33
THYMCell metabolism genePA2G4PGP0.8365280983.84E-33
THYMCell metabolism genePA2G4EBP0.8386877511.85E-33
THYMCell metabolism genePA2G4PSMB70.8431389883.97E-34
THYMCell metabolism genePA2G4PSMA60.845165141.94E-34
THYMCell metabolism genePA2G4DGUOK0.8507633332.53E-35
THYMCell metabolism genePA2G4POLA20.8523227351.42E-35
THYMCell metabolism genePA2G4TOMM400.8524262221.36E-35
THYMCell metabolism genePA2G4LSM50.8527613091.20E-35
THYMCell metabolism genePA2G4TUBA1C0.8584797971.33E-36
THYMCell metabolism genePA2G4GEMIN60.8598297037.83E-37
THYMCell metabolism genePA2G4LSM20.8605203945.95E-37
THYMCell metabolism genePA2G4TIMM8B0.8608894745.13E-37
THYMCell metabolism genePA2G4PAFAH1B30.8644843281.19E-37
THYMCell metabolism genePA2G4SNRPD20.8646104231.13E-37
THYMCell metabolism genePA2G4TK10.8680188512.72E-38
THYMCell metabolism genePA2G4NOP560.8686100652.12E-38
THYMCell metabolism genePA2G4PSMB30.8748500741.39E-39
THYMCell metabolism genePA2G4POLR3K0.8773728144.42E-40
THYMCell metabolism genePA2G4PSMC30.8792687971.84E-40
THYMCell metabolism genePA2G4PSMD130.883437852.54E-41
THYMCell metabolism genePA2G4SNRPB0.8859595997.39E-42
THYMCell metabolism genePA2G4PSMA40.8883646262.21E-42
THYMCell metabolism genePA2G4SNRPF0.8965673022.92E-44
THYMCell metabolism genePA2G4LSM40.9013253942.00E-45
THYMCell metabolism genePA2G4AAAS0.9043642083.36E-46
THYMCell metabolism genePA2G4DTYMK0.9061202861.17E-46
THYMCell metabolism genePA2G4SNRPD10.9262398781.11E-52
THYMCGCPA2G4FANCG0.8043364216.66E-29
THYMCGCPA2G4CDK40.8065672973.60E-29
THYMCGCPA2G4TFPT0.8126510516.42E-30
THYMCGCPA2G4POLD10.8289938224.52E-32
THYMCGCPA2G4FEN10.8340984058.61E-33
THYMCGCPA2G4RECQL40.8375319672.74E-33
THYMCGCPA2G4SDHAF20.8454917481.72E-34
THYMEpifactorPA2G4EXOSC50.8011005741.61E-28
THYMEpifactorPA2G4SS18L20.8013336361.51E-28
THYMEpifactorPA2G4NOC2L0.80287479.94E-29
THYMEpifactorPA2G4HIST1H3F0.803797477.73E-29
THYMEpifactorPA2G4SIRT60.8082421082.25E-29
THYMEpifactorPA2G4INO80C0.8113179999.42E-30
THYMEpifactorPA2G4TFPT0.8126510516.42E-30
THYMEpifactorPA2G4HIST1H2AJ0.8175098421.55E-30
THYMEpifactorPA2G4ANP32A0.8186196761.11E-30
THYMEpifactorPA2G4AURKB0.8191608279.47E-31
THYMEpifactorPA2G4SIRT70.8230265722.93E-31
THYMEpifactorPA2G4EXOSC10.8245143031.85E-31
THYMEpifactorPA2G4CXXC10.8288493084.73E-32
THYMEpifactorPA2G4BRMS10.8370957863.17E-33
THYMEpifactorPA2G4TAF100.8379630872.36E-33
THYMEpifactorPA2G4SUV39H10.8455547441.69E-34
THYMEpifactorPA2G4MCRS10.8678166272.97E-38
THYMEpifactorPA2G4NAP1L40.8681759652.55E-38
THYMEpifactorPA2G4TRIM280.8710545237.41E-39
THYMEpifactorPA2G4H2AFX0.8743337741.75E-39
THYMEpifactorPA2G4MAZ0.8930861651.91E-43
THYMEpifactorPA2G4PPP4C0.8941023021.11E-43
THYMEpifactorPA2G4RUVBL20.8987581288.64E-45
THYMEpifactorPA2G4PPM1G0.9136694369.59E-49
THYMIUPHARPA2G4DYRK40.8060180534.19E-29
THYMIUPHARPA2G4ECE20.8065209893.64E-29
THYMIUPHARPA2G4CDK40.8065672973.60E-29
THYMIUPHARPA2G4SIRT60.8082421082.25E-29
THYMIUPHARPA2G4AURKB0.8191608279.47E-31
THYMIUPHARPA2G4PHKG20.8218256054.23E-31
THYMIUPHARPA2G4SIRT70.8230265722.93E-31
THYMIUPHARPA2G4PKMYT10.8333554851.10E-32
THYMIUPHARPA2G4MFSD2B0.8363803854.03E-33
THYMIUPHARPA2G4PPIA0.8436061583.37E-34
THYMIUPHARPA2G4SUV39H10.8455547441.69E-34
THYMIUPHARPA2G4TOP1MT0.8575719841.90E-36
THYMIUPHARPA2G4BIRC50.8621381043.10E-37
THYMIUPHARPA2G4TRIM280.8710545237.41E-39
THYMKinasePA2G4DYRK40.8060180534.19E-29
THYMKinasePA2G4CDK40.8065672973.60E-29
THYMKinasePA2G4AURKB0.8191608279.47E-31
THYMKinasePA2G4PHKG20.8218256054.23E-31
THYMKinasePA2G4PKMYT10.8333554851.10E-32
THYMKinasePA2G4TRIM280.8710545237.41E-39
THYMTFPA2G4PIN10.8227647123.17E-31
THYMTFPA2G4CXXC10.8288493084.73E-32
THYMTFPA2G4MYBL20.8296473093.66E-32
THYMTFPA2G4THYN10.8338698949.29E-33
THYMTFPA2G4E2F10.8391092421.60E-33
THYMTFPA2G4MXD30.8431667113.93E-34
THYMTFPA2G4ZNF4440.8457881821.55E-34
THYMTFPA2G4ZNF6680.8556131024.06E-36
THYMTFPA2G4GTF3A0.8713938766.39E-39
THYMTFPA2G4MAZ0.8930861651.91E-43
THYMTSGPA2G4FANCG0.8043364216.66E-29
THYMTSGPA2G4SIRT60.8082421082.25E-29
THYMTSGPA2G4ANP32A0.8186196761.11E-30
THYMTSGPA2G4PIN10.8227647123.17E-31
THYMTSGPA2G4NME10.8237721942.33E-31
THYMTSGPA2G4HTRA20.8256805931.29E-31
THYMTSGPA2G4MYO1A0.834541897.44E-33
THYMTSGPA2G4PFN10.8348002586.83E-33
THYMTSGPA2G4AIP0.8353622095.66E-33
THYMTSGPA2G4BRMS10.8370957863.17E-33
THYMTSGPA2G4E2F10.8391092421.60E-33
THYMTSGPA2G4ZNF6680.8556131024.06E-36
THYMTSGPA2G4H2AFX0.8743337741.75E-39
UCSCell metabolism genePA2G4EXOSC50.8011005741.61E-28
UCSCell metabolism genePA2G4TIMM17B0.8023431891.15E-28
UCSCell metabolism genePA2G4TKT0.8061437954.05E-29
UCSCell metabolism genePA2G4PSME10.8062188733.96E-29
UCSCell metabolism genePA2G4SNRPG0.8084251172.14E-29
UCSCell metabolism genePA2G4POLR2H0.8100840331.34E-29
UCSCell metabolism genePA2G4GNA150.8131682815.53E-30
UCSCell metabolism genePA2G4ZNRD10.8138803834.50E-30
UCSCell metabolism genePA2G4TXN0.8181488871.28E-30
UCSCell metabolism genePA2G4ANP32A0.8186196761.11E-30
UCSCell metabolism genePA2G4SNRPE0.8193654568.90E-31
UCSCell metabolism genePA2G4TIMM130.8196896458.08E-31
UCSCell metabolism genePA2G4DUT0.8200541597.24E-31
UCSCell metabolism genePA2G4PHKG20.8218256054.23E-31
UCSCell metabolism genePA2G4POLD20.8227034463.23E-31
UCSCell metabolism genePA2G4NME10.8237721942.33E-31
UCSCell metabolism genePA2G4EXOSC10.8245143031.85E-31
UCSCell metabolism genePA2G4ACOT80.8249352071.62E-31
UCSCell metabolism genePA2G4LSM30.8285343565.23E-32
UCSCell metabolism genePA2G4POLD10.8289938224.52E-32
UCSCell metabolism genePA2G4PSMA50.8297769973.51E-32
UCSCell metabolism genePA2G4GALK10.8357629614.96E-33
UCSCell metabolism genePA2G4PGP0.8365280983.84E-33
UCSCell metabolism genePA2G4EBP0.8386877511.85E-33
UCSCell metabolism genePA2G4PSMB70.8431389883.97E-34
UCSCell metabolism genePA2G4PSMA60.845165141.94E-34
UCSCell metabolism genePA2G4DGUOK0.8507633332.53E-35
UCSCell metabolism genePA2G4POLA20.8523227351.42E-35
UCSCell metabolism genePA2G4TOMM400.8524262221.36E-35
UCSCell metabolism genePA2G4LSM50.8527613091.20E-35
UCSCell metabolism genePA2G4TUBA1C0.8584797971.33E-36
UCSCell metabolism genePA2G4GEMIN60.8598297037.83E-37
UCSCell metabolism genePA2G4LSM20.8605203945.95E-37
UCSCell metabolism genePA2G4TIMM8B0.8608894745.13E-37
UCSCell metabolism genePA2G4PAFAH1B30.8644843281.19E-37
UCSCell metabolism genePA2G4SNRPD20.8646104231.13E-37
UCSCell metabolism genePA2G4TK10.8680188512.72E-38
UCSCell metabolism genePA2G4NOP560.8686100652.12E-38
UCSCell metabolism genePA2G4PSMB30.8748500741.39E-39
UCSCell metabolism genePA2G4POLR3K0.8773728144.42E-40
UCSCell metabolism genePA2G4PSMC30.8792687971.84E-40
UCSCell metabolism genePA2G4PSMD130.883437852.54E-41
UCSCell metabolism genePA2G4SNRPB0.8859595997.39E-42
UCSCell metabolism genePA2G4PSMA40.8883646262.21E-42
UCSCell metabolism genePA2G4SNRPF0.8965673022.92E-44
UCSCell metabolism genePA2G4LSM40.9013253942.00E-45
UCSCell metabolism genePA2G4AAAS0.9043642083.36E-46
UCSCell metabolism genePA2G4DTYMK0.9061202861.17E-46
UCSCell metabolism genePA2G4SNRPD10.9262398781.11E-52
UCSCGCPA2G4FANCG0.8043364216.66E-29
UCSCGCPA2G4CDK40.8065672973.60E-29
UCSCGCPA2G4TFPT0.8126510516.42E-30
UCSCGCPA2G4POLD10.8289938224.52E-32
UCSCGCPA2G4FEN10.8340984058.61E-33
UCSCGCPA2G4RECQL40.8375319672.74E-33
UCSCGCPA2G4SDHAF20.8454917481.72E-34
UCSEpifactorPA2G4EXOSC50.8011005741.61E-28
UCSEpifactorPA2G4SS18L20.8013336361.51E-28
UCSEpifactorPA2G4NOC2L0.80287479.94E-29
UCSEpifactorPA2G4HIST1H3F0.803797477.73E-29
UCSEpifactorPA2G4SIRT60.8082421082.25E-29
UCSEpifactorPA2G4INO80C0.8113179999.42E-30
UCSEpifactorPA2G4TFPT0.8126510516.42E-30
UCSEpifactorPA2G4HIST1H2AJ0.8175098421.55E-30
UCSEpifactorPA2G4ANP32A0.8186196761.11E-30
UCSEpifactorPA2G4AURKB0.8191608279.47E-31
UCSEpifactorPA2G4SIRT70.8230265722.93E-31
UCSEpifactorPA2G4EXOSC10.8245143031.85E-31
UCSEpifactorPA2G4CXXC10.8288493084.73E-32
UCSEpifactorPA2G4BRMS10.8370957863.17E-33
UCSEpifactorPA2G4TAF100.8379630872.36E-33
UCSEpifactorPA2G4SUV39H10.8455547441.69E-34
UCSEpifactorPA2G4MCRS10.8678166272.97E-38
UCSEpifactorPA2G4NAP1L40.8681759652.55E-38
UCSEpifactorPA2G4TRIM280.8710545237.41E-39
UCSEpifactorPA2G4H2AFX0.8743337741.75E-39
UCSEpifactorPA2G4MAZ0.8930861651.91E-43
UCSEpifactorPA2G4PPP4C0.8941023021.11E-43
UCSEpifactorPA2G4RUVBL20.8987581288.64E-45
UCSEpifactorPA2G4PPM1G0.9136694369.59E-49
UCSIUPHARPA2G4DYRK40.8060180534.19E-29
UCSIUPHARPA2G4ECE20.8065209893.64E-29
UCSIUPHARPA2G4CDK40.8065672973.60E-29
UCSIUPHARPA2G4SIRT60.8082421082.25E-29
UCSIUPHARPA2G4AURKB0.8191608279.47E-31
UCSIUPHARPA2G4PHKG20.8218256054.23E-31
UCSIUPHARPA2G4SIRT70.8230265722.93E-31
UCSIUPHARPA2G4PKMYT10.8333554851.10E-32
UCSIUPHARPA2G4MFSD2B0.8363803854.03E-33
UCSIUPHARPA2G4PPIA0.8436061583.37E-34
UCSIUPHARPA2G4SUV39H10.8455547441.69E-34
UCSIUPHARPA2G4TOP1MT0.8575719841.90E-36
UCSIUPHARPA2G4BIRC50.8621381043.10E-37
UCSIUPHARPA2G4TRIM280.8710545237.41E-39
UCSKinasePA2G4DYRK40.8060180534.19E-29
UCSKinasePA2G4CDK40.8065672973.60E-29
UCSKinasePA2G4AURKB0.8191608279.47E-31
UCSKinasePA2G4PHKG20.8218256054.23E-31
UCSKinasePA2G4PKMYT10.8333554851.10E-32
UCSKinasePA2G4TRIM280.8710545237.41E-39
UCSTFPA2G4PIN10.8227647123.17E-31
UCSTFPA2G4CXXC10.8288493084.73E-32
UCSTFPA2G4MYBL20.8296473093.66E-32
UCSTFPA2G4THYN10.8338698949.29E-33
UCSTFPA2G4E2F10.8391092421.60E-33
UCSTFPA2G4MXD30.8431667113.93E-34
UCSTFPA2G4ZNF4440.8457881821.55E-34
UCSTFPA2G4ZNF6680.8556131024.06E-36
UCSTFPA2G4GTF3A0.8713938766.39E-39
UCSTFPA2G4MAZ0.8930861651.91E-43
UCSTSGPA2G4FANCG0.8043364216.66E-29
UCSTSGPA2G4SIRT60.8082421082.25E-29
UCSTSGPA2G4ANP32A0.8186196761.11E-30
UCSTSGPA2G4PIN10.8227647123.17E-31
UCSTSGPA2G4NME10.8237721942.33E-31
UCSTSGPA2G4HTRA20.8256805931.29E-31
UCSTSGPA2G4MYO1A0.834541897.44E-33
UCSTSGPA2G4PFN10.8348002586.83E-33
UCSTSGPA2G4AIP0.8353622095.66E-33
UCSTSGPA2G4BRMS10.8370957863.17E-33
UCSTSGPA2G4E2F10.8391092421.60E-33
UCSTSGPA2G4ZNF6680.8556131024.06E-36
UCSTSGPA2G4H2AFX0.8743337741.75E-39


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Protein structure


check button Protein 3D structure
Visit iCn3D.


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Protein-Protein Interaction


check button Protein-protein interaction networks
* Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure

check buttonOverlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure
check button
* Edge colors based on TCGA cancer types.

check button* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P))
all structure
Cancer typeTranslation factorInteracting protein coding geneFCadj.pval
LIHCPA2G4NMD3-1.372286570830660.000137265065605683
KIRPPA2G4RPL18A-1.516513928088850.00016188295558095
BLCAPA2G4RPL5-3.505815513675550.00026702880859375
STADPA2G4RPL52.243619288562790.000433447770774365
COADPA2G4RPL132.117453144829120.000465095043182374
KIRCPA2G4NMD31.429724811111170.000552342824201752
THCAPA2G4RPLP0-1.748886805920940.000772056397653126
THCAPA2G4RPL41.387940635413070.00128543522995411
PRADPA2G4RPL41.25897758922730.00136912931788367
PRADPA2G4RPL18A1.406001757484990.00205137828390396
KICHPA2G4RPLP0-1.28401328947610.00341922044754028
CHOLPA2G4NMD3-4.913339630049690.00390625
ESCAPA2G4RPL151.766294175356440.0048828125
STADPA2G4RPL41.505417101290020.00647870777174831
COADPA2G4RPLP01.2732037523870.011966735124588
BLCAPA2G4RPL4-1.272082912879920.0180816650390625
BRCAPA2G4RPL23A-1.007088397872020.0188078315893149
KICHPA2G4RPL51.793802414896290.0219083428382874
STADPA2G4RPL13-1.170787228548760.0294188209809363
KICHPA2G4RPL13-5.956180471753940.0366820693016052
KIRPPA2G4RPL23A-1.529364559767511.2875534594059e-06
KIRCPA2G4RPLP0-3.515942657256191.68239022549371e-11
KIRCPA2G4RPL13-3.440155711112922.58914497097505e-10
LUADPA2G4LSG1-2.263908639574152.83612198579349e-08
KIRCPA2G4RPL4-2.620090405077813.30026076039221e-08
LUADPA2G4RPLP0-1.809128846658763.32622703073417e-05
KIRPPA2G4RPLP0-2.443521640228925.8719888329506e-07
STADPA2G4LSG1-1.599610501606945.8719888329506e-07
LUADPA2G4RPL23A-2.225261085351877.13242533835451e-05
KIRCPA2G4RPL18A-4.430793049608439.2516163152192e-11


check button Protein-protein interactors with this translation factor (BIOGRID-3.4.160)
PPI interactors with PA2G4
SGK1, ATR, HDAC2, RB1, ERBB3, MTOR, AR, USP39, ATG101, DDA1, GBAS, NRBF2, PDPK1, PIK3C2A, PRKAA1, PRKAG1, SH3GLB2, UBA5, RNF20, IKBKG, SIN3A, MDM2, AKT1, HDAC5, AI837181, TERF1, CDK2, FUS, UBE2I, NPM1, ATP6V0A1, SERBP1, ATP5B, EIF2A, LIG4, NCL, TOP1, IGF2BP2, RPLP0, HIST1H1A, RPL4, RPL8, RPL15, RPL18, RPL18A, RPL21, RPL11, RPL12, RPL28, RPL27, RPL30, RPLP2, EEF2K, FN1, UBL4A, ITGA4, HMGA1, HMGA2, EXOSC5, NELFB, DIMT1, EIF3K, MAP2, NMT1, FAU, G3BP1, IGF2BP3, KRT17, RPS27L, RPL23A, YBX1, HSPA4, STUB1, DHX9, LAMB1, DDX21, HSPA1B, PKN1, VIM, ACTB, HNRNPA2B1, MOV10, CUL7, OBSL1, CCDC8, CDKN2A, HNRNPK, ESR1, TMED7, NTRK1, MYCBP, OFD1, SPICE1, RPL10, Eif3a, Tmed2, Rpl35, Rrbp1, FOXB1, FOXH1, FOXI2, FOXL1, MCM2, Ksr1, U2AF2, EIF2S2, FBXW7, PTP4A1, PTPN6, ANXA5, GPI, TRAP1, UBE2N, SND1, SNRPB2, NANS, PLS3, EIF5B, IDH2, PDIA3, MRPL12, CRNN, ZNF207, CPNE3, CS, PYGL, SF3A3, DNAJC8, CPSF6, PPA1, HPRT1, SF3A1, ECHS1, SRP68, MYL12B, AIMP1, CBS, BRCA1, YAP1, KCTD12, PPTC7, PHOSPHO1, CTNNB1, HDAC4, PRPF8, EFTUD2, AAR2, PIH1D1, RPTOR, ESR2, MYC, ATG16L1, ACTC1, PHB, MAPT, USP14, NR2C2, AGRN, DDX60, IRF2, MAP3K14, MAB21L2, VAMP5, RRN3, ITFG1, BIRC3, LMBR1L, NFX1, WWP2, TRIM28, PARK2, LRRK2, CMTR1, PINK1, HCVgp1, ZC3H18, HSPA5, MYBPC2, PDIA6, CETN3, TARBP1, M, nsp4, CIT, CHMP4C, KIF14, PRC1, ARHGAP36, DOCK8, ARHGAP39, ARHGEF39, Pik3r2, NDN, ZNF263, NUPR1, BRD4, Apc2, RBM39, YWHAE, ASXL1, EIF3H, DNAJC2, TRIM24, OGT, CD274, DDRGK1, LRRC59, TRIM37, FZR1, NAA40, TMED2, EP300, SUV39H1, RBFOX2, Eif5, ORF7a, RCHY1,


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Mutations


check button Clinically associated variants from ClinVar.
GeneChrPositionRefSeqVarSeqRefSeeqVarTypePathogenicDiseaseVarInfo


check button nsSNVs with sample frequency (size of circle) from TCGA 33 cancers.
all structure


check button SNVs and Indels
GeneCancer typeChromosomeStartEndRefSeeqMutSeqMutation typeAAchange# samples
PA2G4BLCAchr125650529556505295GCMissense_Mutationp.Q367H4
PA2G4CHOLchr125650367656503676GTMissense_Mutationp.D196Y4
PA2G4HNSCchr125650665656506656AGMissense_Mutationp.N390S3
PA2G4PAADchr125650503056505030CASilentp.T334T3
PA2G4SKCMchr125650423656504236TCMissense_Mutationp.V228A3
PA2G4SKCMchr125650438756504387CTSilentp.P251P3
PA2G4BLCAchr125650529556505295GCMissense_Mutation2
PA2G4CESCchr125650368056503680GCMissense_Mutation2
PA2G4HNSCchr125649859056498590GAMissense_Mutationp.M23I2
PA2G4SARCchr125650132656501327AA-Frame_Shift_Delp.K139fs2
PA2G4CESCchr125650438656504386CTMissense_Mutation2
PA2G4STADchr125650530256505303-AFrame_Shift_Insp.K369fs2
PA2G4LIHCchr125650441256504412A-Frame_Shift_Delp.K260fs2
PA2G4PAADchr125650503056505030CASilent2
PA2G4HNSCchr125650420856504208GAMissense_Mutationp.E219K2
PA2G4LGGchr125650424056504240CTSilent2
PA2G4HNSCchr125650421756504217GTNonsense_Mutationp.E222*2
PA2G4TGCTchr125650526856505268CTSilent2
PA2G4BLCAchr125650445456504454GAMissense_Mutation2
PA2G4KIRCchr125650530256505302A-Frame_Shift_Delp.K369fs2
PA2G4LGGchr125650434556504345CTSilent2
PA2G4TGCTchr125650526856505268CTSilentp.L358L2
PA2G4UCECchr125650437956504379CTNonsense_Mutationp.R249*2
PA2G4KIRCchr125650419456504194A-Frame_Shift_Delp.E214fs2
PA2G4LGGchr125650477356504773CTMissense_Mutation2
PA2G4UCECchr125650531056505310GTMissense_Mutationp.K372N2
PA2G4LAMLchr125478726954787269GAMissense_Mutationp.A119T2
PA2G4LGGchr125650477356504773CTMissense_Mutationp.R290W2
PA2G4THCAchr125650044156500441AGMissense_Mutationp.D53G2
PA2G4ACCchr125650420556504205TAMissense_Mutationp.F218I2
PA2G4BLCAchr125650080456500804AGMissense_Mutationp.N83S2
PA2G4LGGchr125650131956501319AGSilentp.T136T2
PA2G4COADchr125650050356500504AA-Splice_Site.2
PA2G4THYMchr125649858956498589TAMissense_Mutation2
PA2G4LGGchr125650434556504345CTSilentp.A237A2
PA2G4STADchr125650500056505000GASilentp.L324L2
PA2G4LIHCchr125649859056498590G-Frame_Shift_Delp.M23fs2
PA2G4HNSCchr125650476656504766GCMissense_Mutationp.K287N2
PA2G4LGGchr125650424056504240CTSilentp.L229L2
PA2G4STADchr125650444856504448CTMissense_Mutationp.R272C2
PA2G4COADchr125650050356500506AAAA-Splice_Site.1
PA2G4LIHCchr125650370856503708AGSilentp.T206T1
PA2G4LUADchr125650097856500979GGTTMissense_Mutationp.G111L1
PA2G4THYMchr125650442156504421CTMissense_Mutation1
PA2G4SARCchr125650504556505045GTMissense_Mutation1
PA2G4LGGchr125650501156505011AGMissense_Mutationp.N328S1
PA2G4STADchr125650500856505008CAMissense_Mutationp.P327H1
PA2G4ESCAchr125650529656505296A-Frame_Shift_Delp.K369fs1
PA2G4LIHCchr125650508956505090-AFrame_Shift_Insp.Q354fs1
PA2G4LUSCchr125650049756500497ATNonsense_Mutationp.K72*1
PA2G4THYMchr125650041456500414CTMissense_Mutationp.S44L1
PA2G4BLCAchr125650503856505038CGMissense_Mutation1
PA2G4LGGchr125650477156504771CAMissense_Mutationp.A289D1
PA2G4ESCAchr125650529656505296A-Frame_Shift_Del1
PA2G4THYMchr125650442156504421CTMissense_Mutationp.R263C1
PA2G4BLCAchr125650080456500804AGMissense_Mutation1
PA2G4SARCchr125650132956501330-CFrame_Shift_Insp.D141fs1
PA2G4CESCchr125650424856504248CGMissense_Mutation1
PA2G4TGCTchr125650042156500421GTSilent1
PA2G4ESCAchr125650529656505296A-Frame_Shift_Delp.Q367fs1
PA2G4LIHCchr125650098956500989G-Frame_Shift_Delp.V114fs1
PA2G4THYMchr125649855056498550AGMissense_Mutationp.Q10R1
PA2G4BLCAchr125650049656500496GASilent1
PA2G4SARCchr125650133256501332GAMissense_Mutationp.D141N1
PA2G4CESCchr125650424856504248CGNonsense_Mutationp.S232*1
PA2G4LGGchr125650131956501319AGSilent1
PA2G4ESCAchr125650529656505296A-Frame_Shift_Delp.K373fs1
PA2G4LIHCchr125650078556500785C-Frame_Shift_Delp.P77fs1
PA2G4PRADchr125650366656503666GASilentp.Q192Q1
PA2G4THYMchr125650436056504360GTMissense_Mutationp.Q242H1
PA2G4CESCchr125650438656504386CTMissense_Mutationp.P251L1
PA2G4GBMchr125650103956501039AGMissense_Mutationp.Q131_splice1
PA2G4LIHCchr125650503756505037C-Frame_Shift_Delp.P337fs1
PA2G4READchr125650436256504362GTMissense_Mutationp.R243I1
PA2G4BLCAchr125650135056501350CTMissense_Mutationp.H147Y1
PA2G4CESCchr125650368056503680GCMissense_Mutationp.G197A1
PA2G4TGCTchr125650138956501389GAMissense_Mutationp.G160R1
PA2G4SARCchr125650132656501327AA-Frame_Shift_Del1
PA2G4GBMchr125650502256505022CTMissense_Mutationp.R332W1
PA2G4SKCMchr125650528456505284CTNonsense_Mutationp.R364*1
PA2G4LGGchr125650501156505011AGMissense_Mutation1
PA2G4LIHCchr125650530256505302A-Frame_Shift_Delp.K373fs1
PA2G4THCAchr125650044156500441AGMissense_Mutation1
PA2G4SARCchr125650132956501330--Frame_Shift_Ins1
PA2G4HNSCchr125650420856504208GAMissense_Mutation1
PA2G4BLCAchr125650503856505038CGMissense_Mutationp.P337R1
PA2G4SKCMchr125650499156504991TCSilentp.F321F1
PA2G4COADchr125650050356500503A-Splice_Site.1
PA2G4LIHCchr125650079156500791AGMissense_Mutation1
PA2G4LUADchr125650085456500854CTMissense_Mutationp.L100F1
PA2G4SARCchr125650133256501332GAMissense_Mutation1
PA2G4HNSCchr125649859056498590GAMissense_Mutation1
PA2G4SKCMchr125650369756503697CGMissense_Mutationp.Q203E1
PA2G4LIHCchr125650366556503665AGMissense_Mutation1
PA2G4LUADchr125650085656500856CTSilentp.L100L1
PA2G4SARCchr125649836556498365CGMissense_Mutation1
PA2G4ACCchr125650446556504465GASilentp.P277P1
PA2G4HNSCchr125650665656506656AGMissense_Mutation1
PA2G4BLCAchr125650445456504454GAMissense_Mutationp.D274N1
PA2G4COADchr125650050356500505AAA-Splice_Site.1
PA2G4LUADchr125649849956498499GATranslation_Start_Site1
PA2G4THYMchr125649855056498550AGMissense_Mutation1
PA2G4SARCchr125650526556505265CASilent1
PA2G4BLCAchr125650135056501350CTMissense_Mutation1
PA2G4CESCchr125650098356500983CASilent1

check buttonCopy number variation (CNV) of PA2G4
* Click on the image to open the original image in a new window.
all structure

check buttonFusion gene breakpoints (product of the structural variants (SVs)) across PA2G4
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


check button Fusion genes with this translation factor from FusionGDB2.0.
FusionGDB2 IDDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
96169BLCATCGA-DK-A6B6-01AESYT1chr1256522493+PA2G4chr1256500372+
96169N/AEC544564LINC00886chr3156527157-PA2G4chr1256506739+
87232LUADTCGA-86-7955-01APA2G4chr1256498609+ANKRD52chr1256651695-
103309N/ACV396726PA2G4chr1256507469-JAK1chr165362875-
62174N/ACA488250PA2G4chr1256504252+KIF26Achr14104640623+
62174N/AAI199410PA2G4chr1256506605-LINC00886chr3156527088+
72858SARCTCGA-DX-A3LY-01BPA2G4chr1256498609+MARK1chr1220752696+
96169N/AEC571880PA2G4chr1256506839-PA2G4chr1256506860+
62174UCECTCGA-AJ-A3BFPA2G4chr1256503719+RAB5Bchr1256385880+
62174UCECTCGA-AJ-A3BF-01APA2G4chr1256503719+RAB5Bchr1256385881+
74660N/ABM014946PA2G4chr1256506934+TIMMDC1chr3119239138+
96169N/AAA603936SEMA4Dchr992066501-PA2G4chr1256507691-
96173GBMTCGA-32-1982UBE2L3chr2221922060+PA2G4chr1256503013+


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Prognostic Analysis


check button Kaplan-Meier plots with logrank tests of overall survival (OS)
all structure
Cancer typeTranslation factorCoefficentHazard ratioWald test pvalLikelihool ratio pvalLogrank test pval# samples


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Translation factor and Gender


check button Differential gene expression between female and male. (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
LUADPA2G40.002224402767154970.062

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Translation factor and Age


check button Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
LUSCPA2G40.009136918955507990.29
THCAPA2G40.03327334268575331
LAMLPA2G40.008820500893627940.29
THYMPA2G40.02270281638488290.7

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Related Drugs


check button Drugs targeting genes involved in this translation factor.
(DrugBank Version 5.1.8 2021-05-08)
UniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases


check button Diseases associated with this translation factor.
(DisGeNet 4.0)
Disease IDDisease Name# PubMedsDisease source
C0024623Malignant neoplasm of stomach1CTD_human
C1708349Hereditary Diffuse Gastric Cancer1CTD_human