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Translation Factor: PA2G4 (NCBI Gene ID:5036) |
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Gene Summary |
Gene Information | Gene Name: PA2G4 | Gene ID: 5036 | Gene Symbol | PA2G4 | Gene ID | 5036 |
Gene Name | proliferation-associated 2G4 | |
Synonyms | EBP1|HG4-1|p38-2G4 | |
Cytomap | 12q13.2 | |
Type of Gene | protein-coding | |
Description | proliferation-associated protein 2G4ErbB-3 binding protein 1ErbB3-binding protein Ebp1cell cycle protein p38-2G4 homologerbB3-binding protein 1proliferation-associated 2G4, 38kDproliferation-associated 2G4, 38kDa | |
Modification date | 20200313 | |
UniProtAcc | Q9UQ80 |
Child GO biological process term(s) under GO:0006412 |
GO ID | GO term |
GO:0006417 | Regulation of translation |
GO:0006412 | Translation |
Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | PA2G4 | GO:0045892 | negative regulation of transcription, DNA-templated | 15073182 |
Inferred gene age of translation factor. |
Gene | Inferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25 |
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We searched PubMed using 'PA2G4[title] AND translation [title] AND human.' |
Gene | Title | PMID |
PA2G4 | . | . |
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Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. For more annotations, please visit our ExonSkipDB. |
Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ENST | Exon skip start (DNA) | Exon Skip end (DNA) | ORF |
ENST00000303305 | 56505259 | 56505313 | In-frame |
Exon skipping position in the amino acid sequence. |
ENST | Exon skip start (DNA) | Exon Skip end (DNA) | Len(transcript seq) | Exon skip start (mRNA) | Exon Skip end (mRNA) | Len(amino acid seq) | Exon skip start (AA) | Exon Skip end (AA) |
Potentially (partially) lost protein functional features of UniProt. |
UniProtAcc | Exon skip start (AA) | Exon Skip end (AA) | Function feature start (AA) | Function feature end (AA) | Functional feature type | Functional feature desc. |
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Gene expression level across TCGA pancancer |
Gene expression level across GTEx pantissue |
Expression level of gene isoforms across TCGA pancancer |
Expression level of gene isoforms across GTEx pantissue |
Cancer(tissue) type-specific expression level of Translation factor using z-score distriution |
Differential expression between tumor and matched normal (in the cancer types with more than 10 matched samples) |
Cancer type | Translation factor | FC | adj.pval |
PRAD | PA2G4 | -1.39525821465227 | 0.000305145157975212 |
BRCA | PA2G4 | -1.29091766707702 | 0.000664421590817696 |
LIHC | PA2G4 | -2.11966355213965 | 1.52957264107439e-06 |
LUAD | PA2G4 | -1.77916485674617 | 2.04592776341023e-07 |
KIRC | PA2G4 | -1.18793742823904 | 2.15831756070263e-10 |
KIRP | PA2G4 | -1.71581840025124 | 2.49594449996948e-07 |
STAD | PA2G4 | -2.25448780422398 | 6.68526627123356e-05 |
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Translation factor expression regulation through miRNA binding |
Cancer type | Gene | miRNA | TargetScan binding score (Context++ score percentile) | Coefficient | Pvalue |
PCPG | PA2G4 | hsa-miR-223-3p | 73 | -0.325827653359299 | 0.00353146501612761 |
Translation factor expression regulation through methylation in the promoter of Translation factor |
Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
LIHC | PA2G4 | 2 | 1 | 0.0237395061418053 | 0.215880534488985 | 0.180041310541311 | -0.646959035498517 | -0.539436532890182 |
MESO | PA2G4 | 2 | 1 | 0.0108361377218407 | 0.206107878787879 | 0.178573245614035 | 0.517273273507291 | 0.141276503172518 |
Translation factor expression regulation through methylation in the gene body of Translation factor (positive regulation) |
Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
Translation factor expression regulation through copy number variation of Translation factor |
Cancer type | Gene | Coefficient | Pvalue |
READ | PA2G4 | 0.171431794 | 0.001392133 |
GBM | PA2G4 | 0.320554873 | 0.012450356 |
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Strongly correlated genes belong to cellular important gene groups with PA2G4 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green) |
Cancer type | Gene group | Translation factor | Correlated gene | Coefficient | Pvalue |
COAD | Cell metabolism gene | PA2G4 | HSPD1 | 0.801780342 | 4.27E-75 |
COAD | Cell metabolism gene | PA2G4 | NME1 | 0.806106675 | 1.70E-76 |
COAD | Cell metabolism gene | PA2G4 | NUP37 | 0.827023874 | 8.55E-84 |
COAD | Cell metabolism gene | PA2G4 | CCT2 | 0.857649532 | 1.82E-96 |
COAD | Cell metabolism gene | PA2G4 | SNRPF | 0.863564051 | 2.95E-99 |
COAD | CGC | PA2G4 | CDK4 | 0.830966101 | 2.79E-85 |
COAD | IUPHAR | PA2G4 | CDK4 | 0.830966101 | 2.79E-85 |
COAD | Kinase | PA2G4 | CDK4 | 0.830966101 | 2.79E-85 |
COAD | TSG | PA2G4 | HSPD1 | 0.801780342 | 4.27E-75 |
COAD | TSG | PA2G4 | NME1 | 0.806106675 | 1.70E-76 |
DLBC | Cell metabolism gene | PA2G4 | EXOSC2 | 0.81438278 | 1.91E-12 |
DLBC | Cell metabolism gene | PA2G4 | CCT2 | 0.822772771 | 7.27E-13 |
DLBC | Cell metabolism gene | PA2G4 | NOP56 | 0.826515989 | 4.65E-13 |
DLBC | Epifactor | PA2G4 | EXOSC2 | 0.81438278 | 1.91E-12 |
LAML | Cell metabolism gene | PA2G4 | NME1 | 0.80308002 | 2.69E-40 |
LAML | CGC | PA2G4 | CDK4 | 0.81864063 | 4.83E-43 |
LAML | IUPHAR | PA2G4 | CDK4 | 0.81864063 | 4.83E-43 |
LAML | Kinase | PA2G4 | CDK4 | 0.81864063 | 4.83E-43 |
LAML | TSG | PA2G4 | NME1 | 0.80308002 | 2.69E-40 |
READ | Cell metabolism gene | PA2G4 | SNRPF | 0.846355544 | 6.11E-30 |
READ | CGC | PA2G4 | CDK4 | 0.83179091 | 4.39E-28 |
READ | IUPHAR | PA2G4 | CDK4 | 0.83179091 | 4.39E-28 |
READ | Kinase | PA2G4 | CDK4 | 0.83179091 | 4.39E-28 |
TGCT | Cell metabolism gene | PA2G4 | TUBA1C | 0.80804611 | 3.23E-37 |
TGCT | Cell metabolism gene | PA2G4 | NME1 | 0.815817503 | 1.85E-38 |
TGCT | Cell metabolism gene | PA2G4 | TIMM44 | 0.821779431 | 1.88E-39 |
TGCT | Cell metabolism gene | PA2G4 | TIMM50 | 0.827915661 | 1.63E-40 |
TGCT | Cell metabolism gene | PA2G4 | SNRPD1 | 0.835546937 | 6.75E-42 |
TGCT | Cell metabolism gene | PA2G4 | PFDN4 | 0.835662731 | 6.43E-42 |
TGCT | Cell metabolism gene | PA2G4 | TOMM40 | 0.838719859 | 1.71E-42 |
TGCT | Cell metabolism gene | PA2G4 | PSMC4 | 0.855341819 | 7.75E-46 |
TGCT | Cell metabolism gene | PA2G4 | SNRPF | 0.870833755 | 2.35E-49 |
TGCT | Epifactor | PA2G4 | DNAJC2 | 0.80416329 | 1.29E-36 |
TGCT | IUPHAR | PA2G4 | PPIA | 0.803814565 | 1.46E-36 |
TGCT | TSG | PA2G4 | NME1 | 0.815817503 | 1.85E-38 |
THYM | Cell metabolism gene | PA2G4 | EXOSC5 | 0.801100574 | 1.61E-28 |
THYM | Cell metabolism gene | PA2G4 | TIMM17B | 0.802343189 | 1.15E-28 |
THYM | Cell metabolism gene | PA2G4 | TKT | 0.806143795 | 4.05E-29 |
THYM | Cell metabolism gene | PA2G4 | PSME1 | 0.806218873 | 3.96E-29 |
THYM | Cell metabolism gene | PA2G4 | SNRPG | 0.808425117 | 2.14E-29 |
THYM | Cell metabolism gene | PA2G4 | POLR2H | 0.810084033 | 1.34E-29 |
THYM | Cell metabolism gene | PA2G4 | GNA15 | 0.813168281 | 5.53E-30 |
THYM | Cell metabolism gene | PA2G4 | ZNRD1 | 0.813880383 | 4.50E-30 |
THYM | Cell metabolism gene | PA2G4 | TXN | 0.818148887 | 1.28E-30 |
THYM | Cell metabolism gene | PA2G4 | ANP32A | 0.818619676 | 1.11E-30 |
THYM | Cell metabolism gene | PA2G4 | SNRPE | 0.819365456 | 8.90E-31 |
THYM | Cell metabolism gene | PA2G4 | TIMM13 | 0.819689645 | 8.08E-31 |
THYM | Cell metabolism gene | PA2G4 | DUT | 0.820054159 | 7.24E-31 |
THYM | Cell metabolism gene | PA2G4 | PHKG2 | 0.821825605 | 4.23E-31 |
THYM | Cell metabolism gene | PA2G4 | POLD2 | 0.822703446 | 3.23E-31 |
THYM | Cell metabolism gene | PA2G4 | NME1 | 0.823772194 | 2.33E-31 |
THYM | Cell metabolism gene | PA2G4 | EXOSC1 | 0.824514303 | 1.85E-31 |
THYM | Cell metabolism gene | PA2G4 | ACOT8 | 0.824935207 | 1.62E-31 |
THYM | Cell metabolism gene | PA2G4 | LSM3 | 0.828534356 | 5.23E-32 |
THYM | Cell metabolism gene | PA2G4 | POLD1 | 0.828993822 | 4.52E-32 |
THYM | Cell metabolism gene | PA2G4 | PSMA5 | 0.829776997 | 3.51E-32 |
THYM | Cell metabolism gene | PA2G4 | GALK1 | 0.835762961 | 4.96E-33 |
THYM | Cell metabolism gene | PA2G4 | PGP | 0.836528098 | 3.84E-33 |
THYM | Cell metabolism gene | PA2G4 | EBP | 0.838687751 | 1.85E-33 |
THYM | Cell metabolism gene | PA2G4 | PSMB7 | 0.843138988 | 3.97E-34 |
THYM | Cell metabolism gene | PA2G4 | PSMA6 | 0.84516514 | 1.94E-34 |
THYM | Cell metabolism gene | PA2G4 | DGUOK | 0.850763333 | 2.53E-35 |
THYM | Cell metabolism gene | PA2G4 | POLA2 | 0.852322735 | 1.42E-35 |
THYM | Cell metabolism gene | PA2G4 | TOMM40 | 0.852426222 | 1.36E-35 |
THYM | Cell metabolism gene | PA2G4 | LSM5 | 0.852761309 | 1.20E-35 |
THYM | Cell metabolism gene | PA2G4 | TUBA1C | 0.858479797 | 1.33E-36 |
THYM | Cell metabolism gene | PA2G4 | GEMIN6 | 0.859829703 | 7.83E-37 |
THYM | Cell metabolism gene | PA2G4 | LSM2 | 0.860520394 | 5.95E-37 |
THYM | Cell metabolism gene | PA2G4 | TIMM8B | 0.860889474 | 5.13E-37 |
THYM | Cell metabolism gene | PA2G4 | PAFAH1B3 | 0.864484328 | 1.19E-37 |
THYM | Cell metabolism gene | PA2G4 | SNRPD2 | 0.864610423 | 1.13E-37 |
THYM | Cell metabolism gene | PA2G4 | TK1 | 0.868018851 | 2.72E-38 |
THYM | Cell metabolism gene | PA2G4 | NOP56 | 0.868610065 | 2.12E-38 |
THYM | Cell metabolism gene | PA2G4 | PSMB3 | 0.874850074 | 1.39E-39 |
THYM | Cell metabolism gene | PA2G4 | POLR3K | 0.877372814 | 4.42E-40 |
THYM | Cell metabolism gene | PA2G4 | PSMC3 | 0.879268797 | 1.84E-40 |
THYM | Cell metabolism gene | PA2G4 | PSMD13 | 0.88343785 | 2.54E-41 |
THYM | Cell metabolism gene | PA2G4 | SNRPB | 0.885959599 | 7.39E-42 |
THYM | Cell metabolism gene | PA2G4 | PSMA4 | 0.888364626 | 2.21E-42 |
THYM | Cell metabolism gene | PA2G4 | SNRPF | 0.896567302 | 2.92E-44 |
THYM | Cell metabolism gene | PA2G4 | LSM4 | 0.901325394 | 2.00E-45 |
THYM | Cell metabolism gene | PA2G4 | AAAS | 0.904364208 | 3.36E-46 |
THYM | Cell metabolism gene | PA2G4 | DTYMK | 0.906120286 | 1.17E-46 |
THYM | Cell metabolism gene | PA2G4 | SNRPD1 | 0.926239878 | 1.11E-52 |
THYM | CGC | PA2G4 | FANCG | 0.804336421 | 6.66E-29 |
THYM | CGC | PA2G4 | CDK4 | 0.806567297 | 3.60E-29 |
THYM | CGC | PA2G4 | TFPT | 0.812651051 | 6.42E-30 |
THYM | CGC | PA2G4 | POLD1 | 0.828993822 | 4.52E-32 |
THYM | CGC | PA2G4 | FEN1 | 0.834098405 | 8.61E-33 |
THYM | CGC | PA2G4 | RECQL4 | 0.837531967 | 2.74E-33 |
THYM | CGC | PA2G4 | SDHAF2 | 0.845491748 | 1.72E-34 |
THYM | Epifactor | PA2G4 | EXOSC5 | 0.801100574 | 1.61E-28 |
THYM | Epifactor | PA2G4 | SS18L2 | 0.801333636 | 1.51E-28 |
THYM | Epifactor | PA2G4 | NOC2L | 0.8028747 | 9.94E-29 |
THYM | Epifactor | PA2G4 | HIST1H3F | 0.80379747 | 7.73E-29 |
THYM | Epifactor | PA2G4 | SIRT6 | 0.808242108 | 2.25E-29 |
THYM | Epifactor | PA2G4 | INO80C | 0.811317999 | 9.42E-30 |
THYM | Epifactor | PA2G4 | TFPT | 0.812651051 | 6.42E-30 |
THYM | Epifactor | PA2G4 | HIST1H2AJ | 0.817509842 | 1.55E-30 |
THYM | Epifactor | PA2G4 | ANP32A | 0.818619676 | 1.11E-30 |
THYM | Epifactor | PA2G4 | AURKB | 0.819160827 | 9.47E-31 |
THYM | Epifactor | PA2G4 | SIRT7 | 0.823026572 | 2.93E-31 |
THYM | Epifactor | PA2G4 | EXOSC1 | 0.824514303 | 1.85E-31 |
THYM | Epifactor | PA2G4 | CXXC1 | 0.828849308 | 4.73E-32 |
THYM | Epifactor | PA2G4 | BRMS1 | 0.837095786 | 3.17E-33 |
THYM | Epifactor | PA2G4 | TAF10 | 0.837963087 | 2.36E-33 |
THYM | Epifactor | PA2G4 | SUV39H1 | 0.845554744 | 1.69E-34 |
THYM | Epifactor | PA2G4 | MCRS1 | 0.867816627 | 2.97E-38 |
THYM | Epifactor | PA2G4 | NAP1L4 | 0.868175965 | 2.55E-38 |
THYM | Epifactor | PA2G4 | TRIM28 | 0.871054523 | 7.41E-39 |
THYM | Epifactor | PA2G4 | H2AFX | 0.874333774 | 1.75E-39 |
THYM | Epifactor | PA2G4 | MAZ | 0.893086165 | 1.91E-43 |
THYM | Epifactor | PA2G4 | PPP4C | 0.894102302 | 1.11E-43 |
THYM | Epifactor | PA2G4 | RUVBL2 | 0.898758128 | 8.64E-45 |
THYM | Epifactor | PA2G4 | PPM1G | 0.913669436 | 9.59E-49 |
THYM | IUPHAR | PA2G4 | DYRK4 | 0.806018053 | 4.19E-29 |
THYM | IUPHAR | PA2G4 | ECE2 | 0.806520989 | 3.64E-29 |
THYM | IUPHAR | PA2G4 | CDK4 | 0.806567297 | 3.60E-29 |
THYM | IUPHAR | PA2G4 | SIRT6 | 0.808242108 | 2.25E-29 |
THYM | IUPHAR | PA2G4 | AURKB | 0.819160827 | 9.47E-31 |
THYM | IUPHAR | PA2G4 | PHKG2 | 0.821825605 | 4.23E-31 |
THYM | IUPHAR | PA2G4 | SIRT7 | 0.823026572 | 2.93E-31 |
THYM | IUPHAR | PA2G4 | PKMYT1 | 0.833355485 | 1.10E-32 |
THYM | IUPHAR | PA2G4 | MFSD2B | 0.836380385 | 4.03E-33 |
THYM | IUPHAR | PA2G4 | PPIA | 0.843606158 | 3.37E-34 |
THYM | IUPHAR | PA2G4 | SUV39H1 | 0.845554744 | 1.69E-34 |
THYM | IUPHAR | PA2G4 | TOP1MT | 0.857571984 | 1.90E-36 |
THYM | IUPHAR | PA2G4 | BIRC5 | 0.862138104 | 3.10E-37 |
THYM | IUPHAR | PA2G4 | TRIM28 | 0.871054523 | 7.41E-39 |
THYM | Kinase | PA2G4 | DYRK4 | 0.806018053 | 4.19E-29 |
THYM | Kinase | PA2G4 | CDK4 | 0.806567297 | 3.60E-29 |
THYM | Kinase | PA2G4 | AURKB | 0.819160827 | 9.47E-31 |
THYM | Kinase | PA2G4 | PHKG2 | 0.821825605 | 4.23E-31 |
THYM | Kinase | PA2G4 | PKMYT1 | 0.833355485 | 1.10E-32 |
THYM | Kinase | PA2G4 | TRIM28 | 0.871054523 | 7.41E-39 |
THYM | TF | PA2G4 | PIN1 | 0.822764712 | 3.17E-31 |
THYM | TF | PA2G4 | CXXC1 | 0.828849308 | 4.73E-32 |
THYM | TF | PA2G4 | MYBL2 | 0.829647309 | 3.66E-32 |
THYM | TF | PA2G4 | THYN1 | 0.833869894 | 9.29E-33 |
THYM | TF | PA2G4 | E2F1 | 0.839109242 | 1.60E-33 |
THYM | TF | PA2G4 | MXD3 | 0.843166711 | 3.93E-34 |
THYM | TF | PA2G4 | ZNF444 | 0.845788182 | 1.55E-34 |
THYM | TF | PA2G4 | ZNF668 | 0.855613102 | 4.06E-36 |
THYM | TF | PA2G4 | GTF3A | 0.871393876 | 6.39E-39 |
THYM | TF | PA2G4 | MAZ | 0.893086165 | 1.91E-43 |
THYM | TSG | PA2G4 | FANCG | 0.804336421 | 6.66E-29 |
THYM | TSG | PA2G4 | SIRT6 | 0.808242108 | 2.25E-29 |
THYM | TSG | PA2G4 | ANP32A | 0.818619676 | 1.11E-30 |
THYM | TSG | PA2G4 | PIN1 | 0.822764712 | 3.17E-31 |
THYM | TSG | PA2G4 | NME1 | 0.823772194 | 2.33E-31 |
THYM | TSG | PA2G4 | HTRA2 | 0.825680593 | 1.29E-31 |
THYM | TSG | PA2G4 | MYO1A | 0.83454189 | 7.44E-33 |
THYM | TSG | PA2G4 | PFN1 | 0.834800258 | 6.83E-33 |
THYM | TSG | PA2G4 | AIP | 0.835362209 | 5.66E-33 |
THYM | TSG | PA2G4 | BRMS1 | 0.837095786 | 3.17E-33 |
THYM | TSG | PA2G4 | E2F1 | 0.839109242 | 1.60E-33 |
THYM | TSG | PA2G4 | ZNF668 | 0.855613102 | 4.06E-36 |
THYM | TSG | PA2G4 | H2AFX | 0.874333774 | 1.75E-39 |
UCS | Cell metabolism gene | PA2G4 | EXOSC5 | 0.801100574 | 1.61E-28 |
UCS | Cell metabolism gene | PA2G4 | TIMM17B | 0.802343189 | 1.15E-28 |
UCS | Cell metabolism gene | PA2G4 | TKT | 0.806143795 | 4.05E-29 |
UCS | Cell metabolism gene | PA2G4 | PSME1 | 0.806218873 | 3.96E-29 |
UCS | Cell metabolism gene | PA2G4 | SNRPG | 0.808425117 | 2.14E-29 |
UCS | Cell metabolism gene | PA2G4 | POLR2H | 0.810084033 | 1.34E-29 |
UCS | Cell metabolism gene | PA2G4 | GNA15 | 0.813168281 | 5.53E-30 |
UCS | Cell metabolism gene | PA2G4 | ZNRD1 | 0.813880383 | 4.50E-30 |
UCS | Cell metabolism gene | PA2G4 | TXN | 0.818148887 | 1.28E-30 |
UCS | Cell metabolism gene | PA2G4 | ANP32A | 0.818619676 | 1.11E-30 |
UCS | Cell metabolism gene | PA2G4 | SNRPE | 0.819365456 | 8.90E-31 |
UCS | Cell metabolism gene | PA2G4 | TIMM13 | 0.819689645 | 8.08E-31 |
UCS | Cell metabolism gene | PA2G4 | DUT | 0.820054159 | 7.24E-31 |
UCS | Cell metabolism gene | PA2G4 | PHKG2 | 0.821825605 | 4.23E-31 |
UCS | Cell metabolism gene | PA2G4 | POLD2 | 0.822703446 | 3.23E-31 |
UCS | Cell metabolism gene | PA2G4 | NME1 | 0.823772194 | 2.33E-31 |
UCS | Cell metabolism gene | PA2G4 | EXOSC1 | 0.824514303 | 1.85E-31 |
UCS | Cell metabolism gene | PA2G4 | ACOT8 | 0.824935207 | 1.62E-31 |
UCS | Cell metabolism gene | PA2G4 | LSM3 | 0.828534356 | 5.23E-32 |
UCS | Cell metabolism gene | PA2G4 | POLD1 | 0.828993822 | 4.52E-32 |
UCS | Cell metabolism gene | PA2G4 | PSMA5 | 0.829776997 | 3.51E-32 |
UCS | Cell metabolism gene | PA2G4 | GALK1 | 0.835762961 | 4.96E-33 |
UCS | Cell metabolism gene | PA2G4 | PGP | 0.836528098 | 3.84E-33 |
UCS | Cell metabolism gene | PA2G4 | EBP | 0.838687751 | 1.85E-33 |
UCS | Cell metabolism gene | PA2G4 | PSMB7 | 0.843138988 | 3.97E-34 |
UCS | Cell metabolism gene | PA2G4 | PSMA6 | 0.84516514 | 1.94E-34 |
UCS | Cell metabolism gene | PA2G4 | DGUOK | 0.850763333 | 2.53E-35 |
UCS | Cell metabolism gene | PA2G4 | POLA2 | 0.852322735 | 1.42E-35 |
UCS | Cell metabolism gene | PA2G4 | TOMM40 | 0.852426222 | 1.36E-35 |
UCS | Cell metabolism gene | PA2G4 | LSM5 | 0.852761309 | 1.20E-35 |
UCS | Cell metabolism gene | PA2G4 | TUBA1C | 0.858479797 | 1.33E-36 |
UCS | Cell metabolism gene | PA2G4 | GEMIN6 | 0.859829703 | 7.83E-37 |
UCS | Cell metabolism gene | PA2G4 | LSM2 | 0.860520394 | 5.95E-37 |
UCS | Cell metabolism gene | PA2G4 | TIMM8B | 0.860889474 | 5.13E-37 |
UCS | Cell metabolism gene | PA2G4 | PAFAH1B3 | 0.864484328 | 1.19E-37 |
UCS | Cell metabolism gene | PA2G4 | SNRPD2 | 0.864610423 | 1.13E-37 |
UCS | Cell metabolism gene | PA2G4 | TK1 | 0.868018851 | 2.72E-38 |
UCS | Cell metabolism gene | PA2G4 | NOP56 | 0.868610065 | 2.12E-38 |
UCS | Cell metabolism gene | PA2G4 | PSMB3 | 0.874850074 | 1.39E-39 |
UCS | Cell metabolism gene | PA2G4 | POLR3K | 0.877372814 | 4.42E-40 |
UCS | Cell metabolism gene | PA2G4 | PSMC3 | 0.879268797 | 1.84E-40 |
UCS | Cell metabolism gene | PA2G4 | PSMD13 | 0.88343785 | 2.54E-41 |
UCS | Cell metabolism gene | PA2G4 | SNRPB | 0.885959599 | 7.39E-42 |
UCS | Cell metabolism gene | PA2G4 | PSMA4 | 0.888364626 | 2.21E-42 |
UCS | Cell metabolism gene | PA2G4 | SNRPF | 0.896567302 | 2.92E-44 |
UCS | Cell metabolism gene | PA2G4 | LSM4 | 0.901325394 | 2.00E-45 |
UCS | Cell metabolism gene | PA2G4 | AAAS | 0.904364208 | 3.36E-46 |
UCS | Cell metabolism gene | PA2G4 | DTYMK | 0.906120286 | 1.17E-46 |
UCS | Cell metabolism gene | PA2G4 | SNRPD1 | 0.926239878 | 1.11E-52 |
UCS | CGC | PA2G4 | FANCG | 0.804336421 | 6.66E-29 |
UCS | CGC | PA2G4 | CDK4 | 0.806567297 | 3.60E-29 |
UCS | CGC | PA2G4 | TFPT | 0.812651051 | 6.42E-30 |
UCS | CGC | PA2G4 | POLD1 | 0.828993822 | 4.52E-32 |
UCS | CGC | PA2G4 | FEN1 | 0.834098405 | 8.61E-33 |
UCS | CGC | PA2G4 | RECQL4 | 0.837531967 | 2.74E-33 |
UCS | CGC | PA2G4 | SDHAF2 | 0.845491748 | 1.72E-34 |
UCS | Epifactor | PA2G4 | EXOSC5 | 0.801100574 | 1.61E-28 |
UCS | Epifactor | PA2G4 | SS18L2 | 0.801333636 | 1.51E-28 |
UCS | Epifactor | PA2G4 | NOC2L | 0.8028747 | 9.94E-29 |
UCS | Epifactor | PA2G4 | HIST1H3F | 0.80379747 | 7.73E-29 |
UCS | Epifactor | PA2G4 | SIRT6 | 0.808242108 | 2.25E-29 |
UCS | Epifactor | PA2G4 | INO80C | 0.811317999 | 9.42E-30 |
UCS | Epifactor | PA2G4 | TFPT | 0.812651051 | 6.42E-30 |
UCS | Epifactor | PA2G4 | HIST1H2AJ | 0.817509842 | 1.55E-30 |
UCS | Epifactor | PA2G4 | ANP32A | 0.818619676 | 1.11E-30 |
UCS | Epifactor | PA2G4 | AURKB | 0.819160827 | 9.47E-31 |
UCS | Epifactor | PA2G4 | SIRT7 | 0.823026572 | 2.93E-31 |
UCS | Epifactor | PA2G4 | EXOSC1 | 0.824514303 | 1.85E-31 |
UCS | Epifactor | PA2G4 | CXXC1 | 0.828849308 | 4.73E-32 |
UCS | Epifactor | PA2G4 | BRMS1 | 0.837095786 | 3.17E-33 |
UCS | Epifactor | PA2G4 | TAF10 | 0.837963087 | 2.36E-33 |
UCS | Epifactor | PA2G4 | SUV39H1 | 0.845554744 | 1.69E-34 |
UCS | Epifactor | PA2G4 | MCRS1 | 0.867816627 | 2.97E-38 |
UCS | Epifactor | PA2G4 | NAP1L4 | 0.868175965 | 2.55E-38 |
UCS | Epifactor | PA2G4 | TRIM28 | 0.871054523 | 7.41E-39 |
UCS | Epifactor | PA2G4 | H2AFX | 0.874333774 | 1.75E-39 |
UCS | Epifactor | PA2G4 | MAZ | 0.893086165 | 1.91E-43 |
UCS | Epifactor | PA2G4 | PPP4C | 0.894102302 | 1.11E-43 |
UCS | Epifactor | PA2G4 | RUVBL2 | 0.898758128 | 8.64E-45 |
UCS | Epifactor | PA2G4 | PPM1G | 0.913669436 | 9.59E-49 |
UCS | IUPHAR | PA2G4 | DYRK4 | 0.806018053 | 4.19E-29 |
UCS | IUPHAR | PA2G4 | ECE2 | 0.806520989 | 3.64E-29 |
UCS | IUPHAR | PA2G4 | CDK4 | 0.806567297 | 3.60E-29 |
UCS | IUPHAR | PA2G4 | SIRT6 | 0.808242108 | 2.25E-29 |
UCS | IUPHAR | PA2G4 | AURKB | 0.819160827 | 9.47E-31 |
UCS | IUPHAR | PA2G4 | PHKG2 | 0.821825605 | 4.23E-31 |
UCS | IUPHAR | PA2G4 | SIRT7 | 0.823026572 | 2.93E-31 |
UCS | IUPHAR | PA2G4 | PKMYT1 | 0.833355485 | 1.10E-32 |
UCS | IUPHAR | PA2G4 | MFSD2B | 0.836380385 | 4.03E-33 |
UCS | IUPHAR | PA2G4 | PPIA | 0.843606158 | 3.37E-34 |
UCS | IUPHAR | PA2G4 | SUV39H1 | 0.845554744 | 1.69E-34 |
UCS | IUPHAR | PA2G4 | TOP1MT | 0.857571984 | 1.90E-36 |
UCS | IUPHAR | PA2G4 | BIRC5 | 0.862138104 | 3.10E-37 |
UCS | IUPHAR | PA2G4 | TRIM28 | 0.871054523 | 7.41E-39 |
UCS | Kinase | PA2G4 | DYRK4 | 0.806018053 | 4.19E-29 |
UCS | Kinase | PA2G4 | CDK4 | 0.806567297 | 3.60E-29 |
UCS | Kinase | PA2G4 | AURKB | 0.819160827 | 9.47E-31 |
UCS | Kinase | PA2G4 | PHKG2 | 0.821825605 | 4.23E-31 |
UCS | Kinase | PA2G4 | PKMYT1 | 0.833355485 | 1.10E-32 |
UCS | Kinase | PA2G4 | TRIM28 | 0.871054523 | 7.41E-39 |
UCS | TF | PA2G4 | PIN1 | 0.822764712 | 3.17E-31 |
UCS | TF | PA2G4 | CXXC1 | 0.828849308 | 4.73E-32 |
UCS | TF | PA2G4 | MYBL2 | 0.829647309 | 3.66E-32 |
UCS | TF | PA2G4 | THYN1 | 0.833869894 | 9.29E-33 |
UCS | TF | PA2G4 | E2F1 | 0.839109242 | 1.60E-33 |
UCS | TF | PA2G4 | MXD3 | 0.843166711 | 3.93E-34 |
UCS | TF | PA2G4 | ZNF444 | 0.845788182 | 1.55E-34 |
UCS | TF | PA2G4 | ZNF668 | 0.855613102 | 4.06E-36 |
UCS | TF | PA2G4 | GTF3A | 0.871393876 | 6.39E-39 |
UCS | TF | PA2G4 | MAZ | 0.893086165 | 1.91E-43 |
UCS | TSG | PA2G4 | FANCG | 0.804336421 | 6.66E-29 |
UCS | TSG | PA2G4 | SIRT6 | 0.808242108 | 2.25E-29 |
UCS | TSG | PA2G4 | ANP32A | 0.818619676 | 1.11E-30 |
UCS | TSG | PA2G4 | PIN1 | 0.822764712 | 3.17E-31 |
UCS | TSG | PA2G4 | NME1 | 0.823772194 | 2.33E-31 |
UCS | TSG | PA2G4 | HTRA2 | 0.825680593 | 1.29E-31 |
UCS | TSG | PA2G4 | MYO1A | 0.83454189 | 7.44E-33 |
UCS | TSG | PA2G4 | PFN1 | 0.834800258 | 6.83E-33 |
UCS | TSG | PA2G4 | AIP | 0.835362209 | 5.66E-33 |
UCS | TSG | PA2G4 | BRMS1 | 0.837095786 | 3.17E-33 |
UCS | TSG | PA2G4 | E2F1 | 0.839109242 | 1.60E-33 |
UCS | TSG | PA2G4 | ZNF668 | 0.855613102 | 4.06E-36 |
UCS | TSG | PA2G4 | H2AFX | 0.874333774 | 1.75E-39 |
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Protein 3D structure Visit iCn3D. |
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Protein-protein interaction networks * Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
Overlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
* Edge colors based on TCGA cancer types. |
* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P)) |
Cancer type | Translation factor | Interacting protein coding gene | FC | adj.pval |
LIHC | PA2G4 | NMD3 | -1.37228657083066 | 0.000137265065605683 |
KIRP | PA2G4 | RPL18A | -1.51651392808885 | 0.00016188295558095 |
BLCA | PA2G4 | RPL5 | -3.50581551367555 | 0.00026702880859375 |
STAD | PA2G4 | RPL5 | 2.24361928856279 | 0.000433447770774365 |
COAD | PA2G4 | RPL13 | 2.11745314482912 | 0.000465095043182374 |
KIRC | PA2G4 | NMD3 | 1.42972481111117 | 0.000552342824201752 |
THCA | PA2G4 | RPLP0 | -1.74888680592094 | 0.000772056397653126 |
THCA | PA2G4 | RPL4 | 1.38794063541307 | 0.00128543522995411 |
PRAD | PA2G4 | RPL4 | 1.2589775892273 | 0.00136912931788367 |
PRAD | PA2G4 | RPL18A | 1.40600175748499 | 0.00205137828390396 |
KICH | PA2G4 | RPLP0 | -1.2840132894761 | 0.00341922044754028 |
CHOL | PA2G4 | NMD3 | -4.91333963004969 | 0.00390625 |
ESCA | PA2G4 | RPL15 | 1.76629417535644 | 0.0048828125 |
STAD | PA2G4 | RPL4 | 1.50541710129002 | 0.00647870777174831 |
COAD | PA2G4 | RPLP0 | 1.273203752387 | 0.011966735124588 |
BLCA | PA2G4 | RPL4 | -1.27208291287992 | 0.0180816650390625 |
BRCA | PA2G4 | RPL23A | -1.00708839787202 | 0.0188078315893149 |
KICH | PA2G4 | RPL5 | 1.79380241489629 | 0.0219083428382874 |
STAD | PA2G4 | RPL13 | -1.17078722854876 | 0.0294188209809363 |
KICH | PA2G4 | RPL13 | -5.95618047175394 | 0.0366820693016052 |
KIRP | PA2G4 | RPL23A | -1.52936455976751 | 1.2875534594059e-06 |
KIRC | PA2G4 | RPLP0 | -3.51594265725619 | 1.68239022549371e-11 |
KIRC | PA2G4 | RPL13 | -3.44015571111292 | 2.58914497097505e-10 |
LUAD | PA2G4 | LSG1 | -2.26390863957415 | 2.83612198579349e-08 |
KIRC | PA2G4 | RPL4 | -2.62009040507781 | 3.30026076039221e-08 |
LUAD | PA2G4 | RPLP0 | -1.80912884665876 | 3.32622703073417e-05 |
KIRP | PA2G4 | RPLP0 | -2.44352164022892 | 5.8719888329506e-07 |
STAD | PA2G4 | LSG1 | -1.59961050160694 | 5.8719888329506e-07 |
LUAD | PA2G4 | RPL23A | -2.22526108535187 | 7.13242533835451e-05 |
KIRC | PA2G4 | RPL18A | -4.43079304960843 | 9.2516163152192e-11 |
Protein-protein interactors with this translation factor (BIOGRID-3.4.160) |
PPI interactors with PA2G4 |
SGK1, ATR, HDAC2, RB1, ERBB3, MTOR, AR, USP39, ATG101, DDA1, GBAS, NRBF2, PDPK1, PIK3C2A, PRKAA1, PRKAG1, SH3GLB2, UBA5, RNF20, IKBKG, SIN3A, MDM2, AKT1, HDAC5, AI837181, TERF1, CDK2, FUS, UBE2I, NPM1, ATP6V0A1, SERBP1, ATP5B, EIF2A, LIG4, NCL, TOP1, IGF2BP2, RPLP0, HIST1H1A, RPL4, RPL8, RPL15, RPL18, RPL18A, RPL21, RPL11, RPL12, RPL28, RPL27, RPL30, RPLP2, EEF2K, FN1, UBL4A, ITGA4, HMGA1, HMGA2, EXOSC5, NELFB, DIMT1, EIF3K, MAP2, NMT1, FAU, G3BP1, IGF2BP3, KRT17, RPS27L, RPL23A, YBX1, HSPA4, STUB1, DHX9, LAMB1, DDX21, HSPA1B, PKN1, VIM, ACTB, HNRNPA2B1, MOV10, CUL7, OBSL1, CCDC8, CDKN2A, HNRNPK, ESR1, TMED7, NTRK1, MYCBP, OFD1, SPICE1, RPL10, Eif3a, Tmed2, Rpl35, Rrbp1, FOXB1, FOXH1, FOXI2, FOXL1, MCM2, Ksr1, U2AF2, EIF2S2, FBXW7, PTP4A1, PTPN6, ANXA5, GPI, TRAP1, UBE2N, SND1, SNRPB2, NANS, PLS3, EIF5B, IDH2, PDIA3, MRPL12, CRNN, ZNF207, CPNE3, CS, PYGL, SF3A3, DNAJC8, CPSF6, PPA1, HPRT1, SF3A1, ECHS1, SRP68, MYL12B, AIMP1, CBS, BRCA1, YAP1, KCTD12, PPTC7, PHOSPHO1, CTNNB1, HDAC4, PRPF8, EFTUD2, AAR2, PIH1D1, RPTOR, ESR2, MYC, ATG16L1, ACTC1, PHB, MAPT, USP14, NR2C2, AGRN, DDX60, IRF2, MAP3K14, MAB21L2, VAMP5, RRN3, ITFG1, BIRC3, LMBR1L, NFX1, WWP2, TRIM28, PARK2, LRRK2, CMTR1, PINK1, HCVgp1, ZC3H18, HSPA5, MYBPC2, PDIA6, CETN3, TARBP1, M, nsp4, CIT, CHMP4C, KIF14, PRC1, ARHGAP36, DOCK8, ARHGAP39, ARHGEF39, Pik3r2, NDN, ZNF263, NUPR1, BRD4, Apc2, RBM39, YWHAE, ASXL1, EIF3H, DNAJC2, TRIM24, OGT, CD274, DDRGK1, LRRC59, TRIM37, FZR1, NAA40, TMED2, EP300, SUV39H1, RBFOX2, Eif5, ORF7a, RCHY1, |
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Clinically associated variants from ClinVar. |
Gene | Chr | Position | RefSeq | VarSeq | RefSeeq | VarType | Pathogenic | Disease | VarInfo |
nsSNVs with sample frequency (size of circle) from TCGA 33 cancers. |
SNVs and Indels |
Gene | Cancer type | Chromosome | Start | End | RefSeeq | MutSeq | Mutation type | AAchange | # samples |
PA2G4 | BLCA | chr12 | 56505295 | 56505295 | G | C | Missense_Mutation | p.Q367H | 4 |
PA2G4 | CHOL | chr12 | 56503676 | 56503676 | G | T | Missense_Mutation | p.D196Y | 4 |
PA2G4 | HNSC | chr12 | 56506656 | 56506656 | A | G | Missense_Mutation | p.N390S | 3 |
PA2G4 | PAAD | chr12 | 56505030 | 56505030 | C | A | Silent | p.T334T | 3 |
PA2G4 | SKCM | chr12 | 56504236 | 56504236 | T | C | Missense_Mutation | p.V228A | 3 |
PA2G4 | SKCM | chr12 | 56504387 | 56504387 | C | T | Silent | p.P251P | 3 |
PA2G4 | BLCA | chr12 | 56505295 | 56505295 | G | C | Missense_Mutation | 2 | |
PA2G4 | CESC | chr12 | 56503680 | 56503680 | G | C | Missense_Mutation | 2 | |
PA2G4 | HNSC | chr12 | 56498590 | 56498590 | G | A | Missense_Mutation | p.M23I | 2 |
PA2G4 | SARC | chr12 | 56501326 | 56501327 | AA | - | Frame_Shift_Del | p.K139fs | 2 |
PA2G4 | CESC | chr12 | 56504386 | 56504386 | C | T | Missense_Mutation | 2 | |
PA2G4 | STAD | chr12 | 56505302 | 56505303 | - | A | Frame_Shift_Ins | p.K369fs | 2 |
PA2G4 | LIHC | chr12 | 56504412 | 56504412 | A | - | Frame_Shift_Del | p.K260fs | 2 |
PA2G4 | PAAD | chr12 | 56505030 | 56505030 | C | A | Silent | 2 | |
PA2G4 | HNSC | chr12 | 56504208 | 56504208 | G | A | Missense_Mutation | p.E219K | 2 |
PA2G4 | LGG | chr12 | 56504240 | 56504240 | C | T | Silent | 2 | |
PA2G4 | HNSC | chr12 | 56504217 | 56504217 | G | T | Nonsense_Mutation | p.E222* | 2 |
PA2G4 | TGCT | chr12 | 56505268 | 56505268 | C | T | Silent | 2 | |
PA2G4 | BLCA | chr12 | 56504454 | 56504454 | G | A | Missense_Mutation | 2 | |
PA2G4 | KIRC | chr12 | 56505302 | 56505302 | A | - | Frame_Shift_Del | p.K369fs | 2 |
PA2G4 | LGG | chr12 | 56504345 | 56504345 | C | T | Silent | 2 | |
PA2G4 | TGCT | chr12 | 56505268 | 56505268 | C | T | Silent | p.L358L | 2 |
PA2G4 | UCEC | chr12 | 56504379 | 56504379 | C | T | Nonsense_Mutation | p.R249* | 2 |
PA2G4 | KIRC | chr12 | 56504194 | 56504194 | A | - | Frame_Shift_Del | p.E214fs | 2 |
PA2G4 | LGG | chr12 | 56504773 | 56504773 | C | T | Missense_Mutation | 2 | |
PA2G4 | UCEC | chr12 | 56505310 | 56505310 | G | T | Missense_Mutation | p.K372N | 2 |
PA2G4 | LAML | chr12 | 54787269 | 54787269 | G | A | Missense_Mutation | p.A119T | 2 |
PA2G4 | LGG | chr12 | 56504773 | 56504773 | C | T | Missense_Mutation | p.R290W | 2 |
PA2G4 | THCA | chr12 | 56500441 | 56500441 | A | G | Missense_Mutation | p.D53G | 2 |
PA2G4 | ACC | chr12 | 56504205 | 56504205 | T | A | Missense_Mutation | p.F218I | 2 |
PA2G4 | BLCA | chr12 | 56500804 | 56500804 | A | G | Missense_Mutation | p.N83S | 2 |
PA2G4 | LGG | chr12 | 56501319 | 56501319 | A | G | Silent | p.T136T | 2 |
PA2G4 | COAD | chr12 | 56500503 | 56500504 | AA | - | Splice_Site | . | 2 |
PA2G4 | THYM | chr12 | 56498589 | 56498589 | T | A | Missense_Mutation | 2 | |
PA2G4 | LGG | chr12 | 56504345 | 56504345 | C | T | Silent | p.A237A | 2 |
PA2G4 | STAD | chr12 | 56505000 | 56505000 | G | A | Silent | p.L324L | 2 |
PA2G4 | LIHC | chr12 | 56498590 | 56498590 | G | - | Frame_Shift_Del | p.M23fs | 2 |
PA2G4 | HNSC | chr12 | 56504766 | 56504766 | G | C | Missense_Mutation | p.K287N | 2 |
PA2G4 | LGG | chr12 | 56504240 | 56504240 | C | T | Silent | p.L229L | 2 |
PA2G4 | STAD | chr12 | 56504448 | 56504448 | C | T | Missense_Mutation | p.R272C | 2 |
PA2G4 | COAD | chr12 | 56500503 | 56500506 | AAAA | - | Splice_Site | . | 1 |
PA2G4 | LIHC | chr12 | 56503708 | 56503708 | A | G | Silent | p.T206T | 1 |
PA2G4 | LUAD | chr12 | 56500978 | 56500979 | GG | TT | Missense_Mutation | p.G111L | 1 |
PA2G4 | THYM | chr12 | 56504421 | 56504421 | C | T | Missense_Mutation | 1 | |
PA2G4 | SARC | chr12 | 56505045 | 56505045 | G | T | Missense_Mutation | 1 | |
PA2G4 | LGG | chr12 | 56505011 | 56505011 | A | G | Missense_Mutation | p.N328S | 1 |
PA2G4 | STAD | chr12 | 56505008 | 56505008 | C | A | Missense_Mutation | p.P327H | 1 |
PA2G4 | ESCA | chr12 | 56505296 | 56505296 | A | - | Frame_Shift_Del | p.K369fs | 1 |
PA2G4 | LIHC | chr12 | 56505089 | 56505090 | - | A | Frame_Shift_Ins | p.Q354fs | 1 |
PA2G4 | LUSC | chr12 | 56500497 | 56500497 | A | T | Nonsense_Mutation | p.K72* | 1 |
PA2G4 | THYM | chr12 | 56500414 | 56500414 | C | T | Missense_Mutation | p.S44L | 1 |
PA2G4 | BLCA | chr12 | 56505038 | 56505038 | C | G | Missense_Mutation | 1 | |
PA2G4 | LGG | chr12 | 56504771 | 56504771 | C | A | Missense_Mutation | p.A289D | 1 |
PA2G4 | ESCA | chr12 | 56505296 | 56505296 | A | - | Frame_Shift_Del | 1 | |
PA2G4 | THYM | chr12 | 56504421 | 56504421 | C | T | Missense_Mutation | p.R263C | 1 |
PA2G4 | BLCA | chr12 | 56500804 | 56500804 | A | G | Missense_Mutation | 1 | |
PA2G4 | SARC | chr12 | 56501329 | 56501330 | - | C | Frame_Shift_Ins | p.D141fs | 1 |
PA2G4 | CESC | chr12 | 56504248 | 56504248 | C | G | Missense_Mutation | 1 | |
PA2G4 | TGCT | chr12 | 56500421 | 56500421 | G | T | Silent | 1 | |
PA2G4 | ESCA | chr12 | 56505296 | 56505296 | A | - | Frame_Shift_Del | p.Q367fs | 1 |
PA2G4 | LIHC | chr12 | 56500989 | 56500989 | G | - | Frame_Shift_Del | p.V114fs | 1 |
PA2G4 | THYM | chr12 | 56498550 | 56498550 | A | G | Missense_Mutation | p.Q10R | 1 |
PA2G4 | BLCA | chr12 | 56500496 | 56500496 | G | A | Silent | 1 | |
PA2G4 | SARC | chr12 | 56501332 | 56501332 | G | A | Missense_Mutation | p.D141N | 1 |
PA2G4 | CESC | chr12 | 56504248 | 56504248 | C | G | Nonsense_Mutation | p.S232* | 1 |
PA2G4 | LGG | chr12 | 56501319 | 56501319 | A | G | Silent | 1 | |
PA2G4 | ESCA | chr12 | 56505296 | 56505296 | A | - | Frame_Shift_Del | p.K373fs | 1 |
PA2G4 | LIHC | chr12 | 56500785 | 56500785 | C | - | Frame_Shift_Del | p.P77fs | 1 |
PA2G4 | PRAD | chr12 | 56503666 | 56503666 | G | A | Silent | p.Q192Q | 1 |
PA2G4 | THYM | chr12 | 56504360 | 56504360 | G | T | Missense_Mutation | p.Q242H | 1 |
PA2G4 | CESC | chr12 | 56504386 | 56504386 | C | T | Missense_Mutation | p.P251L | 1 |
PA2G4 | GBM | chr12 | 56501039 | 56501039 | A | G | Missense_Mutation | p.Q131_splice | 1 |
PA2G4 | LIHC | chr12 | 56505037 | 56505037 | C | - | Frame_Shift_Del | p.P337fs | 1 |
PA2G4 | READ | chr12 | 56504362 | 56504362 | G | T | Missense_Mutation | p.R243I | 1 |
PA2G4 | BLCA | chr12 | 56501350 | 56501350 | C | T | Missense_Mutation | p.H147Y | 1 |
PA2G4 | CESC | chr12 | 56503680 | 56503680 | G | C | Missense_Mutation | p.G197A | 1 |
PA2G4 | TGCT | chr12 | 56501389 | 56501389 | G | A | Missense_Mutation | p.G160R | 1 |
PA2G4 | SARC | chr12 | 56501326 | 56501327 | AA | - | Frame_Shift_Del | 1 | |
PA2G4 | GBM | chr12 | 56505022 | 56505022 | C | T | Missense_Mutation | p.R332W | 1 |
PA2G4 | SKCM | chr12 | 56505284 | 56505284 | C | T | Nonsense_Mutation | p.R364* | 1 |
PA2G4 | LGG | chr12 | 56505011 | 56505011 | A | G | Missense_Mutation | 1 | |
PA2G4 | LIHC | chr12 | 56505302 | 56505302 | A | - | Frame_Shift_Del | p.K373fs | 1 |
PA2G4 | THCA | chr12 | 56500441 | 56500441 | A | G | Missense_Mutation | 1 | |
PA2G4 | SARC | chr12 | 56501329 | 56501330 | - | - | Frame_Shift_Ins | 1 | |
PA2G4 | HNSC | chr12 | 56504208 | 56504208 | G | A | Missense_Mutation | 1 | |
PA2G4 | BLCA | chr12 | 56505038 | 56505038 | C | G | Missense_Mutation | p.P337R | 1 |
PA2G4 | SKCM | chr12 | 56504991 | 56504991 | T | C | Silent | p.F321F | 1 |
PA2G4 | COAD | chr12 | 56500503 | 56500503 | A | - | Splice_Site | . | 1 |
PA2G4 | LIHC | chr12 | 56500791 | 56500791 | A | G | Missense_Mutation | 1 | |
PA2G4 | LUAD | chr12 | 56500854 | 56500854 | C | T | Missense_Mutation | p.L100F | 1 |
PA2G4 | SARC | chr12 | 56501332 | 56501332 | G | A | Missense_Mutation | 1 | |
PA2G4 | HNSC | chr12 | 56498590 | 56498590 | G | A | Missense_Mutation | 1 | |
PA2G4 | SKCM | chr12 | 56503697 | 56503697 | C | G | Missense_Mutation | p.Q203E | 1 |
PA2G4 | LIHC | chr12 | 56503665 | 56503665 | A | G | Missense_Mutation | 1 | |
PA2G4 | LUAD | chr12 | 56500856 | 56500856 | C | T | Silent | p.L100L | 1 |
PA2G4 | SARC | chr12 | 56498365 | 56498365 | C | G | Missense_Mutation | 1 | |
PA2G4 | ACC | chr12 | 56504465 | 56504465 | G | A | Silent | p.P277P | 1 |
PA2G4 | HNSC | chr12 | 56506656 | 56506656 | A | G | Missense_Mutation | 1 | |
PA2G4 | BLCA | chr12 | 56504454 | 56504454 | G | A | Missense_Mutation | p.D274N | 1 |
PA2G4 | COAD | chr12 | 56500503 | 56500505 | AAA | - | Splice_Site | . | 1 |
PA2G4 | LUAD | chr12 | 56498499 | 56498499 | G | A | Translation_Start_Site | 1 | |
PA2G4 | THYM | chr12 | 56498550 | 56498550 | A | G | Missense_Mutation | 1 | |
PA2G4 | SARC | chr12 | 56505265 | 56505265 | C | A | Silent | 1 | |
PA2G4 | BLCA | chr12 | 56501350 | 56501350 | C | T | Missense_Mutation | 1 | |
PA2G4 | CESC | chr12 | 56500983 | 56500983 | C | A | Silent | 1 |
Copy number variation (CNV) of PA2G4 * Click on the image to open the original image in a new window. |
Fusion gene breakpoints (product of the structural variants (SVs)) across PA2G4 * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion genes with this translation factor from FusionGDB2.0. |
FusionGDB2 ID | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
96169 | BLCA | TCGA-DK-A6B6-01A | ESYT1 | chr12 | 56522493 | + | PA2G4 | chr12 | 56500372 | + |
96169 | N/A | EC544564 | LINC00886 | chr3 | 156527157 | - | PA2G4 | chr12 | 56506739 | + |
87232 | LUAD | TCGA-86-7955-01A | PA2G4 | chr12 | 56498609 | + | ANKRD52 | chr12 | 56651695 | - |
103309 | N/A | CV396726 | PA2G4 | chr12 | 56507469 | - | JAK1 | chr1 | 65362875 | - |
62174 | N/A | CA488250 | PA2G4 | chr12 | 56504252 | + | KIF26A | chr14 | 104640623 | + |
62174 | N/A | AI199410 | PA2G4 | chr12 | 56506605 | - | LINC00886 | chr3 | 156527088 | + |
72858 | SARC | TCGA-DX-A3LY-01B | PA2G4 | chr12 | 56498609 | + | MARK1 | chr1 | 220752696 | + |
96169 | N/A | EC571880 | PA2G4 | chr12 | 56506839 | - | PA2G4 | chr12 | 56506860 | + |
62174 | UCEC | TCGA-AJ-A3BF | PA2G4 | chr12 | 56503719 | + | RAB5B | chr12 | 56385880 | + |
62174 | UCEC | TCGA-AJ-A3BF-01A | PA2G4 | chr12 | 56503719 | + | RAB5B | chr12 | 56385881 | + |
74660 | N/A | BM014946 | PA2G4 | chr12 | 56506934 | + | TIMMDC1 | chr3 | 119239138 | + |
96169 | N/A | AA603936 | SEMA4D | chr9 | 92066501 | - | PA2G4 | chr12 | 56507691 | - |
96173 | GBM | TCGA-32-1982 | UBE2L3 | chr22 | 21922060 | + | PA2G4 | chr12 | 56503013 | + |
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Kaplan-Meier plots with logrank tests of overall survival (OS) |
Cancer type | Translation factor | Coefficent | Hazard ratio | Wald test pval | Likelihool ratio pval | Logrank test pval | # samples |
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Differential gene expression between female and male. (Wilcoxon test, pval<0.05) |
Cancer type | Translation factor | pval | adj.p |
LUAD | PA2G4 | 0.00222440276715497 | 0.062 |
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Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05) |
Cancer type | Translation factor | pval | adj.p |
LUSC | PA2G4 | 0.00913691895550799 | 0.29 |
THCA | PA2G4 | 0.0332733426857533 | 1 |
LAML | PA2G4 | 0.00882050089362794 | 0.29 |
THYM | PA2G4 | 0.0227028163848829 | 0.7 |
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Drugs targeting genes involved in this translation factor. (DrugBank Version 5.1.8 2021-05-08) |
UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Diseases associated with this translation factor. (DisGeNet 4.0) |
Disease ID | Disease Name | # PubMeds | Disease source |
C0024623 | Malignant neoplasm of stomach | 1 | CTD_human |
C1708349 | Hereditary Diffuse Gastric Cancer | 1 | CTD_human |