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Center for Computational Systems Medicine
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Gene Summary

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Translation studies in PubMed

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Exon Skipping Events

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Expression

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Expression Regulation

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Associated Genes

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Protein 3D Structure

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Protein-Protein Interaction

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Mutations

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Prognostic Analysis

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Gender Association

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Age Association

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Related Drugs

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Related Diseases

Translation Factor: MRPL2 (NCBI Gene ID:51069)


Gene Summary

check button Gene Summary
Gene InformationGene Name: MRPL2
Gene ID: 51069
Gene Symbol

MRPL2

Gene ID

51069

Gene Namemitochondrial ribosomal protein L2
SynonymsCGI-22|MRP-L14|RPML14
Cytomap

6p21.1

Type of Geneprotein-coding
Description39S ribosomal protein L2, mitochondrialL2mtMRP-L2mitochondrial large ribosomal subunit protein uL2m
Modification date20200313
UniProtAcc

Q5T653


check button Child GO biological process term(s) under GO:0006412
GO IDGO term
GO:0032543Mitochondrial translation
GO:0005840Ribosome
GO:0006412Translation


check button Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID


check button Inferred gene age of translation factor.
GeneInferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25
MRPL2>1119.25


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Translation Studies in PubMed

check button We searched PubMed using 'MRPL2[title] AND translation [title] AND human.'
GeneTitlePMID
MRPL2..


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Exon Skipping Events

check buttonSkipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
For more annotations, please visit our ExonSkipDB.
all structure

check button Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ENSTExon skip start (DNA)Exon Skip end (DNA)ORF
ENST000003887524302328243023356Frame-shift
ENST000003887524302363443023745In-frame
ENST000003887524302404443024183Frame-shift

check button Exon skipping position in the amino acid sequence.
ENSTExon skip start (DNA)Exon Skip end (DNA)Len(transcript seq)Exon skip start (mRNA)Exon Skip end (mRNA)Len(amino acid seq)Exon skip start (AA)Exon Skip end (AA)
ENST00000388752430236344302374516059461056305173210

check button Potentially (partially) lost protein functional features of UniProt.
UniProtAccExon skip start (AA)Exon Skip end (AA)Function feature start (AA)Function feature end (AA)Functional feature typeFunctional feature desc.
Q5T65317321061305ChainID=PRO_0000261640;Note=39S ribosomal protein L2%2C mitochondrial
Q5T653173210181183Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:5OOM
Q5T653173210184186HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:5OOM
Q5T653173210192196Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:5OOM
Q5T653173210200202TurnOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:5OOL
Q5T653173210204207Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:5OOL


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Expression


check buttonGene expression level across TCGA pancancer
all structure

check buttonGene expression level across GTEx pantissue
all structure

check buttonExpression level of gene isoforms across TCGA pancancer
all structure

check buttonExpression level of gene isoforms across GTEx pantissue
all structure

check buttonCancer(tissue) type-specific expression level of Translation factor using z-score distriution
all structure

check buttonDifferential expression between tumor and matched normal (in the cancer types with more than 10 matched samples)
all structure
Cancer typeTranslation factorFCadj.pval
CHOLMRPL2-1.499263014667520.00390625
BLCAMRPL2-3.292106574771780.0445594787597656
LUADMRPL2-1.267276467410241.07341296213058e-06
LUSCMRPL2-2.667102227067837.24218086307245e-08


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Expression Regulation


check buttonTranslation factor expression regulation through miRNA binding
Cancer typeGenemiRNATargetScan binding score (Context++ score percentile)CoefficientPvalue


check buttonTranslation factor expression regulation through methylation in the promoter of Translation factor
all structure
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a

check buttonTranslation factor expression regulation through methylation in the gene body of Translation factor (positive regulation)
all structure
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a

check buttonTranslation factor expression regulation through copy number variation of Translation factor
all structure
Cancer typeGeneCoefficientPvalue
KIRCMRPL2-0.0295063330.006482864

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Associated Genes


check button Strongly correlated genes belong to cellular important gene groups with MRPL2 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green)
all structure
Cancer typeGene groupTranslation factorCorrelated geneCoefficientPvalue
CHOLCell metabolism geneMRPL2SLC25A110.8501412041.48E-13
CHOLIUPHARMRPL2SLC25A110.8501412041.48E-13
DLBCCell metabolism geneMRPL2PSMC50.8074030654.13E-12
DLBCCell metabolism geneMRPL2MIF0.812786512.29E-12
DLBCCell metabolism geneMRPL2DTYMK0.8164213991.52E-12
DLBCCell metabolism geneMRPL2POLR2L0.8166355731.48E-12
DLBCCell metabolism geneMRPL2SNRPD30.8228163157.24E-13
DLBCCell metabolism geneMRPL2PSMD130.8228387917.22E-13
DLBCCell metabolism geneMRPL2IDH3B0.8278023343.97E-13
DLBCCell metabolism geneMRPL2TIMM100.8292662763.32E-13
DLBCCell metabolism geneMRPL2PSMB70.830601872.81E-13
DLBCCell metabolism geneMRPL2TIMM8B0.8306648332.79E-13
DLBCCell metabolism geneMRPL2PTDSS20.8311985152.61E-13
DLBCCell metabolism geneMRPL2TIMM8A0.8334012231.98E-13
DLBCCell metabolism geneMRPL2SNRPD20.8343832481.75E-13
DLBCCell metabolism geneMRPL2EXOSC50.8379066641.11E-13
DLBCCell metabolism geneMRPL2TOMM220.8399464598.49E-14
DLBCCell metabolism geneMRPL2TIMM90.8442898524.74E-14
DLBCCell metabolism geneMRPL2SNRPE0.8445726754.56E-14
DLBCCell metabolism geneMRPL2PSMC30.8470252633.25E-14
DLBCCell metabolism geneMRPL2PMPCA0.8507021391.94E-14
DLBCCell metabolism geneMRPL2ADSL0.8511732791.81E-14
DLBCCell metabolism geneMRPL2ITPA0.8528023231.43E-14
DLBCCell metabolism geneMRPL2NME20.8536601691.26E-14
DLBCCell metabolism geneMRPL2EXOSC40.855751359.29E-15
DLBCCell metabolism geneMRPL2PSMB30.8621039983.54E-15
DLBCCell metabolism geneMRPL2POLR2I0.8700139719.95E-16
DLBCCell metabolism geneMRPL2ATP5G10.8705115329.16E-16
DLBCCell metabolism geneMRPL2TIMM500.8768237783.12E-16
DLBCCell metabolism geneMRPL2PFDN60.88012111.73E-16
DLBCCell metabolism geneMRPL2POLR2F0.8820844781.21E-16
DLBCCell metabolism geneMRPL2TIMM130.8877395474.16E-17
DLBCCGCMRPL2HRAS0.8016309037.61E-12
DLBCCGCMRPL2U2AF10.8389957849.62E-14
DLBCEpifactorMRPL2RUVBL20.8202227549.81E-13
DLBCEpifactorMRPL2EXOSC50.8379066641.11E-13
DLBCEpifactorMRPL2FBL0.8427470485.84E-14
DLBCEpifactorMRPL2EXOSC40.855751359.29E-15
DLBCIUPHARMRPL2UCHL30.8003129138.73E-12
DLBCIUPHARMRPL2HRAS0.8016309037.61E-12
DLBCIUPHARMRPL2MFSD2B0.8534139111.31E-14
DLBCTFMRPL2THAP40.8387822739.90E-14
DLBCTFMRPL2NME20.8536601691.26E-14
DLBCTSGMRPL2PARK70.801484497.73E-12
DLBCTSGMRPL2PHB0.8851788326.80E-17
DLBCTSGMRPL2GADD45GIP10.8860477095.76E-17
LAMLCell metabolism geneMRPL2AAAS0.8145220212.73E-42
LAMLCell metabolism geneMRPL2MIF0.815100342.14E-42
LAMLCell metabolism geneMRPL2POLR2I0.8269755091.27E-44
LAMLTSGMRPL2GADD45GIP10.806402627.32E-41
LUSCCell metabolism geneMRPL2POLR1C0.81360157.17E-132
PCPGCell metabolism geneMRPL2PFDN60.8082027882.08E-44
PRADCell metabolism geneMRPL2PSMB10.8590301211.75E-161
PRADIUPHARMRPL2PSMB10.8590301211.75E-161
READCell metabolism geneMRPL2POLR1C0.8094893331.46E-25
SKCMIUPHARMRPL2CSNK2B0.8121311021.65E-112
THCACell metabolism geneMRPL2EXOSC40.8031480962.61E-130
THCACell metabolism geneMRPL2GAMT0.8036216721.42E-130
THCACell metabolism geneMRPL2UROD0.8062195664.79E-132
THCACell metabolism geneMRPL2PSMB30.8074917268.94E-133
THCACell metabolism geneMRPL2TOMM400.8086206461.99E-133
THCACell metabolism geneMRPL2TIMM500.8103200582.05E-134
THCACell metabolism geneMRPL2TIMM8B0.8123690691.28E-135
THCACell metabolism geneMRPL2PSMB60.8131626464.31E-136
THCACell metabolism geneMRPL2APRT0.8184705112.67E-139
THCACell metabolism geneMRPL2POLR2J0.8251642551.69E-143
THCACell metabolism geneMRPL2IDH3G0.8266187561.96E-144
THCACell metabolism geneMRPL2DPM30.8507579242.23E-161
THCACell metabolism geneMRPL2TIMM130.8508433571.91E-161
THCACell metabolism geneMRPL2MTX10.8512047631.01E-161
THCACell metabolism geneMRPL2POLR2I0.856050541.69E-165
THCACGCMRPL2ASPSCR10.821679942.72E-141
THCACGCMRPL2COX6C0.8473549728.16E-159
THCAEpifactorMRPL2EXOSC40.8031480962.61E-130
THCAEpifactorMRPL2CCDC1010.8060912765.66E-132
THCAEpifactorMRPL2BRMS10.8199693733.17E-140
THCAEpifactorMRPL2RUVBL20.8453134362.63E-157
THCAEpifactorMRPL2ZNHIT10.8492346493.19E-160
THCAIUPHARMRPL2PSMB60.8131626464.31E-136
THCAKinaseMRPL2FASTK0.8083178592.98E-133
THCATFMRPL2THAP30.8059065967.22E-132
THCATFMRPL2ZNF6880.8200139712.98E-140
THCATSGMRPL2NPRL20.8096763694.86E-134
THCATSGMRPL2PARK70.8164332924.68E-138
THCATSGMRPL2BRMS10.8199693733.17E-140
THCATSGMRPL2GADD45GIP10.8366707093.74E-151
THYMCell metabolism geneMRPL2GUK10.8002587462.02E-28
THYMCell metabolism geneMRPL2PSMC10.801628811.39E-28
THYMCell metabolism geneMRPL2POLR2F0.8022803981.17E-28
THYMCell metabolism geneMRPL2SLC27A50.8043385446.66E-29
THYMCell metabolism geneMRPL2PSMD90.8049848835.58E-29
THYMCell metabolism geneMRPL2LSM40.808608592.03E-29
THYMCell metabolism geneMRPL2PFDN50.8089127211.86E-29
THYMCell metabolism geneMRPL2PSMA40.8089219341.86E-29
THYMCell metabolism geneMRPL2PSMB100.8124277766.85E-30
THYMCell metabolism geneMRPL2MVD0.8132016395.48E-30
THYMCell metabolism geneMRPL2TIMM8B0.8133136765.30E-30
THYMCell metabolism geneMRPL2DPM20.8172873711.66E-30
THYMCell metabolism geneMRPL2ACOT80.8197967357.82E-31
THYMCell metabolism geneMRPL2SLC25A110.8205158366.29E-31
THYMCell metabolism geneMRPL2ITPA0.8230257312.93E-31
THYMCell metabolism geneMRPL2IDH3G0.8248398021.67E-31
THYMCell metabolism geneMRPL2TIMM500.8302207293.05E-32
THYMCell metabolism geneMRPL2POLR2I0.8358036314.89E-33
THYMCell metabolism geneMRPL2FAU0.8363043714.13E-33
THYMCell metabolism geneMRPL2APRT0.838125522.24E-33
THYMCell metabolism geneMRPL2PSMB30.8381475062.22E-33
THYMCell metabolism geneMRPL2PSMD130.8466961241.12E-34
THYMCell metabolism geneMRPL2PFDN60.8472673469.11E-35
THYMCell metabolism geneMRPL2PSMB70.8483197176.22E-35
THYMCell metabolism geneMRPL2PSMB60.85411637.20E-36
THYMCell metabolism geneMRPL2TIMM130.8548473815.45E-36
THYMCell metabolism geneMRPL2PGLS0.8596259738.48E-37
THYMCell metabolism geneMRPL2SNRPD20.8600485537.17E-37
THYMCell metabolism geneMRPL2UROD0.873249252.83E-39
THYMCell metabolism geneMRPL2PSMC30.8735559592.47E-39
THYMCell metabolism geneMRPL2LSM20.8940721171.13E-43
THYMCell metabolism geneMRPL2PSMB10.9033013016.32E-46
THYMCGCMRPL2RBM100.8009831811.66E-28
THYMCGCMRPL2U2AF10.8048827955.73E-29
THYMCGCMRPL2TFPT0.8751820911.20E-39
THYMCGCMRPL2MAP2K20.8784566012.68E-40
THYMEpifactorMRPL2BRMS10.8055529434.77E-29
THYMEpifactorMRPL2INO80E0.8100080611.37E-29
THYMEpifactorMRPL2TRIM280.8155598452.76E-30
THYMEpifactorMRPL2SIRT60.8217931254.27E-31
THYMEpifactorMRPL2FBL0.8315235862.00E-32
THYMEpifactorMRPL2TAF100.8330913311.20E-32
THYMEpifactorMRPL2ZNHIT10.8352223245.93E-33
THYMEpifactorMRPL2PPP4C0.8401816771.11E-33
THYMEpifactorMRPL2PAF10.8523269041.41E-35
THYMEpifactorMRPL2C17orf490.8527067251.23E-35
THYMEpifactorMRPL2CCDC1010.8615588643.92E-37
THYMEpifactorMRPL2DMAP10.8646271641.12E-37
THYMEpifactorMRPL2MBD30.8665293515.10E-38
THYMEpifactorMRPL2TFPT0.8751820911.20E-39
THYMEpifactorMRPL2RUVBL20.8766345716.19E-40
THYMEpifactorMRPL2PRPF310.8863326976.14E-42
THYMIUPHARMRPL2SLC27A50.8043385446.66E-29
THYMIUPHARMRPL2MVD0.8132016395.48E-30
THYMIUPHARMRPL2TRIM280.8155598452.76E-30
THYMIUPHARMRPL2SLC25A110.8205158366.29E-31
THYMIUPHARMRPL2SIRT60.8217931254.27E-31
THYMIUPHARMRPL2PSMB60.85411637.20E-36
THYMIUPHARMRPL2MMP240.8643931511.24E-37
THYMIUPHARMRPL2MAP2K20.8784566012.68E-40
THYMIUPHARMRPL2CSNK2B0.8819815355.12E-41
THYMIUPHARMRPL2PSMB10.9033013016.32E-46
THYMKinaseMRPL2TRIM280.8155598452.76E-30
THYMKinaseMRPL2MAP2K20.8784566012.68E-40
THYMTFMRPL2SNAPC20.8031839249.14E-29
THYMTFMRPL2AKAP8L0.8093932981.63E-29
THYMTFMRPL2DNTTIP10.8122215277.27E-30
THYMTFMRPL2ZNF6680.8128433996.08E-30
THYMTFMRPL2ZNF4440.8200123277.33E-31
THYMTFMRPL2ZNF6530.8265796799.70E-32
THYMTFMRPL2ZNF7870.8293629744.01E-32
THYMTFMRPL2DRAP10.8465050471.20E-34
THYMTFMRPL2ZNF320.8471541029.50E-35
THYMTFMRPL2THYN10.8473199848.94E-35
THYMTFMRPL2MBD30.8665293515.10E-38
THYMTFMRPL2THAP30.8682896982.43E-38
THYMTFMRPL2ZNF4280.8790757832.01E-40
THYMTSGMRPL2BRMS10.8055529434.77E-29
THYMTSGMRPL2ZNF6680.8128433996.08E-30
THYMTSGMRPL2MAD1L10.8144465773.82E-30
THYMTSGMRPL2PFN10.8199404257.49E-31
THYMTSGMRPL2SIRT60.8217931254.27E-31
THYMTSGMRPL2PARK70.8230862662.87E-31
THYMTSGMRPL2GNB2L10.8261941341.09E-31
THYMTSGMRPL2GADD45GIP10.8354476085.51E-33
THYMTSGMRPL2GLTSCR20.8389253261.70E-33
THYMTSGMRPL2TSSC40.8452205171.90E-34
THYMTSGMRPL2HTRA20.8495123874.02E-35
UCECCell metabolism geneMRPL2POLR1C0.8201607933.79E-50
UCECIUPHARMRPL2CSNK2B0.8251997112.94E-51
UCSCell metabolism geneMRPL2GUK10.8002587462.02E-28
UCSCell metabolism geneMRPL2PSMC10.801628811.39E-28
UCSCell metabolism geneMRPL2POLR2F0.8022803981.17E-28
UCSCell metabolism geneMRPL2SLC27A50.8043385446.66E-29
UCSCell metabolism geneMRPL2PSMD90.8049848835.58E-29
UCSCell metabolism geneMRPL2LSM40.808608592.03E-29
UCSCell metabolism geneMRPL2PFDN50.8089127211.86E-29
UCSCell metabolism geneMRPL2PSMA40.8089219341.86E-29
UCSCell metabolism geneMRPL2PSMB100.8124277766.85E-30
UCSCell metabolism geneMRPL2MVD0.8132016395.48E-30
UCSCell metabolism geneMRPL2TIMM8B0.8133136765.30E-30
UCSCell metabolism geneMRPL2DPM20.8172873711.66E-30
UCSCell metabolism geneMRPL2ACOT80.8197967357.82E-31
UCSCell metabolism geneMRPL2SLC25A110.8205158366.29E-31
UCSCell metabolism geneMRPL2ITPA0.8230257312.93E-31
UCSCell metabolism geneMRPL2IDH3G0.8248398021.67E-31
UCSCell metabolism geneMRPL2TIMM500.8302207293.05E-32
UCSCell metabolism geneMRPL2POLR2I0.8358036314.89E-33
UCSCell metabolism geneMRPL2FAU0.8363043714.13E-33
UCSCell metabolism geneMRPL2APRT0.838125522.24E-33
UCSCell metabolism geneMRPL2PSMB30.8381475062.22E-33
UCSCell metabolism geneMRPL2PSMD130.8466961241.12E-34
UCSCell metabolism geneMRPL2PFDN60.8472673469.11E-35
UCSCell metabolism geneMRPL2PSMB70.8483197176.22E-35
UCSCell metabolism geneMRPL2PSMB60.85411637.20E-36
UCSCell metabolism geneMRPL2TIMM130.8548473815.45E-36
UCSCell metabolism geneMRPL2PGLS0.8596259738.48E-37
UCSCell metabolism geneMRPL2SNRPD20.8600485537.17E-37
UCSCell metabolism geneMRPL2UROD0.873249252.83E-39
UCSCell metabolism geneMRPL2PSMC30.8735559592.47E-39
UCSCell metabolism geneMRPL2LSM20.8940721171.13E-43
UCSCell metabolism geneMRPL2PSMB10.9033013016.32E-46
UCSCGCMRPL2RBM100.8009831811.66E-28
UCSCGCMRPL2U2AF10.8048827955.73E-29
UCSCGCMRPL2TFPT0.8751820911.20E-39
UCSCGCMRPL2MAP2K20.8784566012.68E-40
UCSEpifactorMRPL2BRMS10.8055529434.77E-29
UCSEpifactorMRPL2INO80E0.8100080611.37E-29
UCSEpifactorMRPL2TRIM280.8155598452.76E-30
UCSEpifactorMRPL2SIRT60.8217931254.27E-31
UCSEpifactorMRPL2FBL0.8315235862.00E-32
UCSEpifactorMRPL2TAF100.8330913311.20E-32
UCSEpifactorMRPL2ZNHIT10.8352223245.93E-33
UCSEpifactorMRPL2PPP4C0.8401816771.11E-33
UCSEpifactorMRPL2PAF10.8523269041.41E-35
UCSEpifactorMRPL2C17orf490.8527067251.23E-35
UCSEpifactorMRPL2CCDC1010.8615588643.92E-37
UCSEpifactorMRPL2DMAP10.8646271641.12E-37
UCSEpifactorMRPL2MBD30.8665293515.10E-38
UCSEpifactorMRPL2TFPT0.8751820911.20E-39
UCSEpifactorMRPL2RUVBL20.8766345716.19E-40
UCSEpifactorMRPL2PRPF310.8863326976.14E-42
UCSIUPHARMRPL2SLC27A50.8043385446.66E-29
UCSIUPHARMRPL2MVD0.8132016395.48E-30
UCSIUPHARMRPL2TRIM280.8155598452.76E-30
UCSIUPHARMRPL2SLC25A110.8205158366.29E-31
UCSIUPHARMRPL2SIRT60.8217931254.27E-31
UCSIUPHARMRPL2PSMB60.85411637.20E-36
UCSIUPHARMRPL2MMP240.8643931511.24E-37
UCSIUPHARMRPL2MAP2K20.8784566012.68E-40
UCSIUPHARMRPL2CSNK2B0.8819815355.12E-41
UCSIUPHARMRPL2PSMB10.9033013016.32E-46
UCSKinaseMRPL2TRIM280.8155598452.76E-30
UCSKinaseMRPL2MAP2K20.8784566012.68E-40
UCSTFMRPL2SNAPC20.8031839249.14E-29
UCSTFMRPL2AKAP8L0.8093932981.63E-29
UCSTFMRPL2DNTTIP10.8122215277.27E-30
UCSTFMRPL2ZNF6680.8128433996.08E-30
UCSTFMRPL2ZNF4440.8200123277.33E-31
UCSTFMRPL2ZNF6530.8265796799.70E-32
UCSTFMRPL2ZNF7870.8293629744.01E-32
UCSTFMRPL2DRAP10.8465050471.20E-34
UCSTFMRPL2ZNF320.8471541029.50E-35
UCSTFMRPL2THYN10.8473199848.94E-35
UCSTFMRPL2MBD30.8665293515.10E-38
UCSTFMRPL2THAP30.8682896982.43E-38
UCSTFMRPL2ZNF4280.8790757832.01E-40
UCSTSGMRPL2BRMS10.8055529434.77E-29
UCSTSGMRPL2ZNF6680.8128433996.08E-30
UCSTSGMRPL2MAD1L10.8144465773.82E-30
UCSTSGMRPL2PFN10.8199404257.49E-31
UCSTSGMRPL2SIRT60.8217931254.27E-31
UCSTSGMRPL2PARK70.8230862662.87E-31
UCSTSGMRPL2GNB2L10.8261941341.09E-31
UCSTSGMRPL2GADD45GIP10.8354476085.51E-33
UCSTSGMRPL2GLTSCR20.8389253261.70E-33
UCSTSGMRPL2TSSC40.8452205171.90E-34
UCSTSGMRPL2HTRA20.8495123874.02E-35
UVMCell metabolism geneMRPL2PPP2R5D0.8337848828.09E-22
UVMCGCMRPL2HMGA10.8145633333.91E-20
UVMEpifactorMRPL2FOXP40.8006287514.97E-19
UVMEpifactorMRPL2RNF400.8111926477.38E-20
UVMEpifactorMRPL2PELP10.8127486255.51E-20
UVMIUPHARMRPL2TUBB0.8337645818.12E-22
UVMIUPHARMRPL2CSNK2B0.8559376744.76E-24
UVMTFMRPL2FOXP40.8006287514.97E-19
UVMTFMRPL2HMGA10.8145633333.91E-20


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Protein structure


check button Protein 3D structure
Visit iCn3D.


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Protein-Protein Interaction


check button Protein-protein interaction networks
* Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure

check buttonOverlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure
check button
* Edge colors based on TCGA cancer types.

check button* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P))
all structure
Cancer typeTranslation factorInteracting protein coding geneFCadj.pval
BRCAMRPL2MRPL32-3.79791341817940.000134327661287861
KIRCMRPL2MRPL11-1.049668376255570.000354478033746394
LIHCMRPL2MRPL131.544024721076140.000655351190157038
KIRCMRPL2MRPL46-7.360814219449090.0011460554764592
LUADMRPL2MRPL32-2.19662394182640.00121089428940613
KIRPMRPL2MRPL46-7.176716850139060.00123529229313135
ESCAMRPL2MRPL47-2.263737117967150.001953125
CHOLMRPL2MRPL46-2.737917438173210.00390625
ESCAMRPL2MRPL13-1.077460884749950.0068359375
COADMRPL2MRPL47-2.295823818382460.00863465666770936
KICHMRPL2MRPL43-2.181791020098940.00963503122329712
ESCAMRPL2MRPL17-1.187561782149980.009765625
STADMRPL2MRPL47-1.40086856871550.0118026207201183
LIHCMRPL2MRPL17-1.062257297709150.0124123499319886
STADMRPL2MRPL41.43935391356820.0279771662317216
KIRCMRPL2MRPL32-2.796643275788990.0376051795400881
LIHCMRPL2MRPL47-6.595868509485380.0416658979324166
KIRCMRPL2MRPL471.747584753647011.00533732476669e-06
PRADMRPL2MRPL111.125816533946281.15996224044503e-05
STADMRPL2MRPL17-3.908807054491861.49570405483246e-06
LIHCMRPL2MRPL32-1.200741446987532.24402029682138e-06
COADMRPL2MRPL42.777058975144732.98023223876954e-07
LUSCMRPL2MRPL40-8.459972144074983.09303724812157e-05
LUSCMRPL2MRPL17-6.834096832927496.93230040561614e-07
LUADMRPL2MRPL47-1.749909098795679.53955602455483e-07


check button Protein-protein interactors with this translation factor (BIOGRID-3.4.160)
PPI interactors with MRPL2
ICT1, CUL3, MRPL11, MRPL9, MRPL37, MRPL4, MRPL23, MRPL14, MRPL24, MRPL40, MRPL13, MRPL16, RPS18, RPS15, FUBP1, SLC25A3, TUFM, DDX28, EIF3C, CMTM4, GRSF1, MRPL28, RPS8, MRPL39, MRPS30, MRPL47, GFM2, GTPBP4, MRPL17, MRPL18, MRPL22, MRPL32, TSR1, TUBA1C, MRPS7, PHB2, POLR3A, EZH2, MRPL50, MRPL1, MASTL, Ncstn, Brwd3, C6orf203, MRPL10, MRPL42, MRPL35, CYLD, DLST, PDHA1, ESR2, MEPCE, LARP7, RECQL4, MRM1, TRMT61B, LTN1, SNRNP70, Dppa3, NFX1, LRRK2, PRKCI, RAB5A, RASA1, nsp6, KIF14, DOCK8, ACAD9, AUH, C12orf65, C17orf80, C1QBP, C21orf33, CCDC90B, CS, GFM1, HINT2, LRPPRC, MDH2, METTL15, METTL17, MRPS12, MRRF, MTERF3, MTG1, MTG2, MTIF3, MTRF1, MTRF1L, NGRN, PMPCA, PMPCB, RPUSD4, TACO1, TBRG4, TMEM70, TRUB2, TSFM, VWA8, HSCB, MRPL33, MRPS22, MRPL44, MRPL41, MRPL38, GADD45GIP1, DDX54, RPL37, MOV10, MRPL53, RBMS2, RPL26, MRPL20, MRPL46, RPL17, HP1BP3, MRPL51, MRPL52, ZCRB1, MRPL55, COX1, MRPL19, RPL27A, MRPS18C, MRPL12, NSA2, MRPL45, DDX21, MRPL48, MRPS24, SUPV3L1, ZNF326, H1FNT, SRSF12, DAP3, MRPL27, MRPL57, YBX2, FTL, ZC3HAV1, RBM45, RPS3A, FASTKD2, DKC1, MRPL15, YARS2, LIN28A, MRPL34, MALSU1, MRPS18A, YBX1, MSI1, RPL26L1, PIPSL, RPL19, MRPS27, MRPS31, RPUSD3, KLHL3, FTSJ3, RPL13A, MRPS5, RBM19, RNMTL1, MRPL21, MRPS35, PTCD1, RPS10, RPS9, SRSF3, HNRNPU, PPP1R9A, MRPL49, MRPL3, MRPS9, GTPBP10, MRPL30, MRPS21, NDUFAB1, RPL35, KRR1, FAHD1, MRPS33, RBMS3, PTCD3, MRPS25, MRPS2, MRPS17, TFB1M, WBSCR16, YBX3, MRPS26, RPS4Y2, MRPS10, MRPS11, MRPS16, ND5, MRPL43, RPL10, OXA1L, MRPS34, APOBEC3D, MRPL54, RPL23A, EXOSC8, CLK2, KLF12,


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Mutations


check button Clinically associated variants from ClinVar.
GeneChrPositionRefSeqVarSeqRefSeeqVarTypePathogenicDiseaseVarInfo


check button nsSNVs with sample frequency (size of circle) from TCGA 33 cancers.
all structure


check button SNVs and Indels
GeneCancer typeChromosomeStartEndRefSeeqMutSeqMutation typeAAchange# samples
MRPL2BRCAchr64302220643022206CAMissense_Mutationp.A242S4
MRPL2KIRPchr64302364643023646ACMissense_Mutationp.I207S4
MRPL2COADchr64302382743023827CTMissense_Mutationp.R171Q4
MRPL2STADchr64302335643023356CAMissense_Mutationp.G211V4
MRPL2COADchr64302205743022057G-Nonsense_Mutationp.M292X3
MRPL2LUADchr64302584843025848TAMissense_Mutationp.I74F3
MRPL2BRCAchr64302596643025966CTMissense_Mutationp.M34I3
MRPL2PRADchr64302365443023654GASilentp.A204A3
MRPL2ESCAchr64302411743024117CTMissense_Mutationp.R111H3
MRPL2UCECchr64302414943024149GASilentp.H1002
MRPL2SARCchr64302387243023872TAMissense_Mutation2
MRPL2STADchr64302584243025842GAMissense_Mutationp.P76S2
MRPL2LGGchr64302389343023893CTMissense_Mutationp.R149H2
MRPL2STADchr64302407143024071ACSilentp.V126V2
MRPL2CHOLchr64302217043022170TCMissense_Mutation2
MRPL2SKCMchr64302366243023662GAMissense_Mutationp.R202W2
MRPL2CHOLchr64302217043022170TCMissense_Mutationp.K254E2
MRPL2LUADchr64302390943023909CAMissense_Mutationp.G144W2
MRPL2SKCMchr64302406343024063ACMissense_Mutationp.V129G2
MRPL2SKCMchr64302417643024176GASilentp.I91I2
MRPL2UCECchr64302207543022075CAMissense_Mutationp.K285N2
MRPL2SKCMchr64302592343025923GAMissense_Mutationp.P49S2
MRPL2BRCAchr64302209543022095CTMissense_Mutationp.G279R2
MRPL2UCECchr64302214543022145CTMissense_Mutationp.R262H2
MRPL2KIRCchr64302413043024130TGMissense_Mutationp.I107L2
MRPL2SKCMchr64302388343023883GASilentp.I152I2
MRPL2STADchr64302205743022057G-Frame_Shift_Delp.P291fs2
MRPL2UCECchr64302366043023660CASilentp.R2022
MRPL2PRADchr64302405043024050GTSilentp.P133P2
MRPL2UCECchr64302367543023675TGMissense_Mutationp.E197D2
MRPL2UCECchr64302372343023723CTSilentp.A1812
MRPL2LIHCchr64302706743027067G-Frame_Shift_Delp.P18fs2
MRPL2UCECchr64302373743023737GAMissense_Mutationp.R177W2
MRPL2STADchr64302217443022174AGSilentp.H252H2
MRPL2CESCchr64302695443026954CGMissense_Mutationp.E56Q1
MRPL2LIHCchr64302213043022130C-Frame_Shift_Delp.G267fs1
MRPL2GBMchr64302413543024135CTMissense_Mutation1
MRPL2KIRPchr64302364643023646ACMissense_Mutation1
MRPL2THYMchr64302703243027032CTMissense_Mutationp.A30T1
MRPL2UCSchr64302372343023723CTSilent1
MRPL2CESCchr64302709243027092GASilentp.L101
MRPL2LIHCchr64302408643024086G-Frame_Shift_Delp.P121fs1
MRPL2HNSCchr64302219543022195GAMissense_Mutation1
MRPL2SARCchr64302209943022099GTSilent1
MRPL2THYMchr64302214643022146GTMissense_Mutationp.R262S1
MRPL2UCSchr64302372343023723CTSilentp.A181A1
MRPL2LIHCchr64302578343025783C-Frame_Shift_Delp.G95fs1
MRPL2HNSCchr64302387643023876CTMissense_Mutation1
MRPL2LGGchr64302392143023921CTMissense_Mutationp.A140T1
MRPL2UCECchr64302366043023660CASilentp.R202R1
MRPL2HNSCchr64302219543022195GAMissense_Mutationp.P221S1
MRPL2STADchr64302364443023644GANonsense_Mutationp.R208X1
MRPL2LGGchr64302389343023893CTMissense_Mutation1
MRPL2UCECchr64302335643023356CAMissense_Mutationp.G211_splice1
MRPL2HNSCchr64302387643023876CTMissense_Mutationp.E155K1
MRPL2STADchr64302364443023644GANonsense_Mutationp.R208*1
MRPL2BLCAchr64302207143022071GAMissense_Mutationp.R287W1
MRPL2LGGchr64302392143023921CTMissense_Mutation1
MRPL2COADchr64302210043022100CTMissense_Mutationp.R277H1
MRPL2MESOchr64302694943026949CASilent1
MRPL2HNSCchr64302333443023335-CGCAGTIn_Frame_Insp.218_218Q>HCE1
MRPL2STADchr64302374543023745AGMissense_Mutationp.V174A1
MRPL2LIHCchr64302366143023661CTMissense_Mutation1
MRPL2COADchr64302333643023336GAMissense_Mutationp.R218W1
MRPL2OVchr64313172443131724CTSplice_Sitee5-11
MRPL2LIHCchr64302364443023644GTSilent1
MRPL2COADchr64302588143025881ACMissense_Mutationp.F63V1
MRPL2SKCMchr64302206043022060GASilentp.P290P1
MRPL2STADchr64302205743022057G-Frame_Shift_Delp.M292fs1
MRPL2LIHCchr64302391743023917AGMissense_Mutationp.L141P1
MRPL2KIRPchr64302380743023820GCCATCTCTCACCT-Splice_Sitep.A175_splice1
MRPL2SKCMchr64302331043023310GASilentp.I226I1
MRPL2THYMchr64302213943022139CTMissense_Mutation1
MRPL2CESCchr64302709243027092GASilent1
MRPL2LIHCchr64302366143023661CTMissense_Mutationp.R202Q1
MRPL2SARCchr64302372243023722GTMissense_Mutation1
MRPL2KIRPchr64302380743023820GCCATCTCTCACCT-Frame_Shift_Delp.174_174del1
MRPL2THYMchr64302703243027032CTMissense_Mutation1
MRPL2CESCchr64302695443026954CGMissense_Mutation1
MRPL2ESCAchr64302411743024117CTMissense_Mutation1
MRPL2SARCchr64302405943024059GTSilent1
MRPL2KIRPchr64302380743023820GCCATCTCTCACCT-Splice_Sitep.V174_splice1
MRPL2THYMchr64302411043024110CTSilentp.R113R1

check buttonCopy number variation (CNV) of MRPL2
* Click on the image to open the original image in a new window.
all structure

check buttonFusion gene breakpoints (product of the structural variants (SVs)) across MRPL2
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


check button Fusion genes with this translation factor from FusionGDB2.0.
FusionGDB2 IDDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
101039N/AAV682978MRPL2chr643024044-DSCAMchr2142032682-
98382COADTCGA-AA-A02FOBSL1chr2220429963-MRPL2chr643024183-
98382CHOLTCGA-3X-AAVC-01APAFAH1B2chr11117015134+MRPL2chr643025971-
98382Non-CancerTCGA-BR-6454-11APSMB5chr1423502576-MRPL2chr643022224-
98382STADTCGA-FP-7735TBC1D22Bchr637237426+MRPL2chr643025971-
98384STADTCGA-B7-5818VPS33Bchr1591542906-MRPL2chr643022224-


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Prognostic Analysis


check button Kaplan-Meier plots with logrank tests of overall survival (OS)
all structure
Cancer typeTranslation factorCoefficentHazard ratioWald test pvalLikelihool ratio pvalLogrank test pval# samples
KIRCMRPL21.552648146249360.4399619545880940.0003594828020322970.0005184320874416980.000365464784786177604
KIRCMRPL21.552648146249360.4399619545880940.0003594828020322970.0005184320874416980.000365464784786177604
UVMMRPL23.414450966196061.228016708852010.0007948026662843140.001055733560967880.00061632433196036580
KIRCMRPL21.306846863360180.2676172612589420.001289781211159660.001916786579934410.00137904539519825604
KIRCMRPL21.306846863360180.2676172612589420.001289781211159660.001916786579934410.00137904539519825604
BRCAMRPL20.752938740047833-0.2837714090098520.003081012575335720.002665830349396610.003065083359190871200
LGGMRPL20.499934868605716-0.6932774518334470.006591349524162050.005344738307069460.00749724951316792525
BRCAMRPL20.773803325375214-0.2564375392640970.006726455221129510.006847574935833960.006900010509184741200
KIRCMRPL21.314604064275130.2735355284865060.01075407594248680.01481668161086940.0123755993844851604
KIRCMRPL21.314604064275130.2735355284865060.01075407594248680.01481668161086940.0123755993844851604
BRCAMRPL20.767596778026304-0.2644907123218310.01206973899010620.009473773830735130.01220467660449591200
SKCMMRPL21.296710498185510.2598306716188250.012107898873920.01412327012792720.0121885074481852462
SKCMMRPL21.296710498185510.2598306716188250.012107898873920.01412327012792720.0121885074481852462
UVMMRPL22.759207899541381.014943645618920.01407651436051460.0133191941235960.01290950306706380
LGGMRPL20.614942350614612-0.4862267544074070.02798386787402480.02470099031525090.0285717916307552525
SKCMMRPL21.263350567075450.2337673718177020.03134246613966880.03237151498870170.0314353456226912462
SKCMMRPL21.263350567075450.2337673718177020.03134246613966880.03237151498870170.0314353456226912462
LUSCMRPL20.82234335587782-0.1955972632610480.0363411428910630.03467608563174920.0361443925535271545
LAMLMRPL21.533961011638970.4278532864805860.03713708244843640.03674091348094130.0376829592768664160
BLCAMRPL20.771992720519477-0.2587801583807340.03879403993370930.03688523952294820.0387531847263431422
LAMLMRPL20.505907127042516-0.6814021699350580.04160456552285450.04334131270808560.04188293241739160
BRCAMRPL20.702472512127359-0.353149007184113.61410249191058e-053.34909284479143e-054.03597905430731e-051200


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Translation factor and Gender


check button Differential gene expression between female and male. (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
KIRPMRPL20.00776803626715280.22
HNSCMRPL20.01928417012773870.52
MESOMRPL20.02366923300552140.62

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Translation factor and Age


check button Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
LIHCMRPL20.01065159774108360.31
STADMRPL20.02592072347554630.73
LUSCMRPL20.009247051369221940.28
THCAMRPL20.006006933288976540.19
LGGMRPL24.7236458459573e-060.00016
PAADMRPL20.003737369555034830.12

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Related Drugs


check button Drugs targeting genes involved in this translation factor.
(DrugBank Version 5.1.8 2021-05-08)
UniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases


check button Diseases associated with this translation factor.
(DisGeNet 4.0)
Disease IDDisease Name# PubMedsDisease source