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Translation Factor: RPS5 (NCBI Gene ID:6193) |
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Gene Summary |
Gene Information | Gene Name: RPS5 | Gene ID: 6193 | Gene Symbol | RPS5 | Gene ID | 6193 |
Gene Name | ribosomal protein S5 | |
Synonyms | S5 | |
Cytomap | 19q13.43 | |
Type of Gene | protein-coding | |
Description | 40S ribosomal protein S5small ribosomal subunit protein uS7 | |
Modification date | 20200313 | |
UniProtAcc | P46782 |
Child GO biological process term(s) under GO:0006412 |
GO ID | GO term |
GO:0005840 | Ribosome |
GO:0002181 | Cytoplasmic translation |
GO:0006413 | Translational initiation |
GO:0006412 | Translation |
Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Inferred gene age of translation factor. |
Gene | Inferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25 |
RPS5 | >1119.25 |
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We searched PubMed using 'RPS5[title] AND translation [title] AND human.' |
Gene | Title | PMID |
RPS5 | The β-hairpin of 40S exit channel protein Rps5/uS7 promotes efficient and accurate translation initiation in vivo | 26134896 |
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Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. For more annotations, please visit our ExonSkipDB. |
Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ENST | Exon skip start (DNA) | Exon Skip end (DNA) | ORF |
ENST00000196551 | 58904342 | 58904552 | In-frame |
ENST00000596046 | 58904342 | 58904552 | In-frame |
ENST00000601521 | 58904342 | 58904552 | In-frame |
ENST00000196551 | 58904725 | 58904854 | In-frame |
ENST00000596046 | 58904725 | 58904854 | In-frame |
ENST00000601521 | 58904725 | 58904854 | In-frame |
ENST00000196551 | 58905863 | 58905962 | In-frame |
ENST00000596046 | 58905863 | 58905962 | In-frame |
ENST00000601521 | 58905863 | 58905962 | In-frame |
Exon skipping position in the amino acid sequence. |
ENST | Exon skip start (DNA) | Exon Skip end (DNA) | Len(transcript seq) | Exon skip start (mRNA) | Exon Skip end (mRNA) | Len(amino acid seq) | Exon skip start (AA) | Exon Skip end (AA) |
ENST00000196551 | 58904342 | 58904552 | 757 | 181 | 390 | 204 | 36 | 106 |
ENST00000601521 | 58904342 | 58904552 | 1220 | 641 | 850 | 204 | 36 | 106 |
ENST00000596046 | 58904342 | 58904552 | 1537 | 958 | 1167 | 204 | 36 | 106 |
ENST00000196551 | 58904725 | 58904854 | 757 | 391 | 519 | 204 | 106 | 149 |
ENST00000601521 | 58904725 | 58904854 | 1220 | 851 | 979 | 204 | 106 | 149 |
ENST00000596046 | 58904725 | 58904854 | 1537 | 1168 | 1296 | 204 | 106 | 149 |
ENST00000196551 | 58905863 | 58905962 | 757 | 520 | 618 | 204 | 149 | 182 |
ENST00000601521 | 58905863 | 58905962 | 1220 | 980 | 1078 | 204 | 149 | 182 |
ENST00000596046 | 58905863 | 58905962 | 1537 | 1297 | 1395 | 204 | 149 | 182 |
Potentially (partially) lost protein functional features of UniProt. |
UniProtAcc | Exon skip start (AA) | Exon Skip end (AA) | Function feature start (AA) | Function feature end (AA) | Functional feature type | Functional feature desc. |
P46782 | 106 | 149 | 1 | 204 | Chain | ID=PRO_0000370369;Note=40S ribosomal protein S5 |
P46782 | 36 | 106 | 1 | 204 | Chain | ID=PRO_0000370369;Note=40S ribosomal protein S5 |
P46782 | 149 | 182 | 1 | 204 | Chain | ID=PRO_0000370369;Note=40S ribosomal protein S5 |
P46782 | 106 | 149 | 1 | 204 | Chain | ID=PRO_0000370369;Note=40S ribosomal protein S5 |
P46782 | 36 | 106 | 1 | 204 | Chain | ID=PRO_0000370369;Note=40S ribosomal protein S5 |
P46782 | 149 | 182 | 1 | 204 | Chain | ID=PRO_0000370369;Note=40S ribosomal protein S5 |
P46782 | 106 | 149 | 1 | 204 | Chain | ID=PRO_0000370369;Note=40S ribosomal protein S5 |
P46782 | 36 | 106 | 1 | 204 | Chain | ID=PRO_0000370369;Note=40S ribosomal protein S5 |
P46782 | 149 | 182 | 1 | 204 | Chain | ID=PRO_0000370369;Note=40S ribosomal protein S5 |
P46782 | 106 | 149 | 2 | 204 | Chain | ID=PRO_0000124526;Note=40S ribosomal protein S5%2C N-terminally processed |
P46782 | 36 | 106 | 2 | 204 | Chain | ID=PRO_0000124526;Note=40S ribosomal protein S5%2C N-terminally processed |
P46782 | 149 | 182 | 2 | 204 | Chain | ID=PRO_0000124526;Note=40S ribosomal protein S5%2C N-terminally processed |
P46782 | 106 | 149 | 2 | 204 | Chain | ID=PRO_0000124526;Note=40S ribosomal protein S5%2C N-terminally processed |
P46782 | 36 | 106 | 2 | 204 | Chain | ID=PRO_0000124526;Note=40S ribosomal protein S5%2C N-terminally processed |
P46782 | 149 | 182 | 2 | 204 | Chain | ID=PRO_0000124526;Note=40S ribosomal protein S5%2C N-terminally processed |
P46782 | 106 | 149 | 2 | 204 | Chain | ID=PRO_0000124526;Note=40S ribosomal protein S5%2C N-terminally processed |
P46782 | 36 | 106 | 2 | 204 | Chain | ID=PRO_0000124526;Note=40S ribosomal protein S5%2C N-terminally processed |
P46782 | 149 | 182 | 2 | 204 | Chain | ID=PRO_0000124526;Note=40S ribosomal protein S5%2C N-terminally processed |
P46782 | 36 | 106 | 47 | 47 | Modified residue | Note=N6-acetyllysine%3B alternate;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:19608861;Dbxref=PMID:19608861 |
P46782 | 36 | 106 | 47 | 47 | Modified residue | Note=N6-acetyllysine%3B alternate;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:19608861;Dbxref=PMID:19608861 |
P46782 | 36 | 106 | 47 | 47 | Modified residue | Note=N6-acetyllysine%3B alternate;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:19608861;Dbxref=PMID:19608861 |
P46782 | 106 | 149 | 142 | 142 | Modified residue | Note=Phosphoserine;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:23186163;Dbxref=PMID:23186163 |
P46782 | 106 | 149 | 142 | 142 | Modified residue | Note=Phosphoserine;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:23186163;Dbxref=PMID:23186163 |
P46782 | 106 | 149 | 142 | 142 | Modified residue | Note=Phosphoserine;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:23186163;Dbxref=PMID:23186163 |
P46782 | 36 | 106 | 47 | 47 | Cross-link | Note=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)%3B alternate;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:28112733;Dbxref=PMID:28112733 |
P46782 | 36 | 106 | 47 | 47 | Cross-link | Note=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)%3B alternate;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:28112733;Dbxref=PMID:28112733 |
P46782 | 36 | 106 | 47 | 47 | Cross-link | Note=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)%3B alternate;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:28112733;Dbxref=PMID:28112733 |
P46782 | 36 | 106 | 59 | 60 | Sequence conflict | Note=KR->NA;Ontology_term=ECO:0000305;evidence=ECO:0000305 |
P46782 | 36 | 106 | 59 | 60 | Sequence conflict | Note=KR->NA;Ontology_term=ECO:0000305;evidence=ECO:0000305 |
P46782 | 36 | 106 | 59 | 60 | Sequence conflict | Note=KR->NA;Ontology_term=ECO:0000305;evidence=ECO:0000305 |
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Gene expression level across TCGA pancancer |
Gene expression level across GTEx pantissue |
Expression level of gene isoforms across TCGA pancancer |
Expression level of gene isoforms across GTEx pantissue |
Cancer(tissue) type-specific expression level of Translation factor using z-score distriution |
Differential expression between tumor and matched normal (in the cancer types with more than 10 matched samples) |
Cancer type | Translation factor | FC | adj.pval |
BRCA | RPS5 | 1.85428655007552 | 0.00025235746216315 |
PRAD | RPS5 | 1.17578127105964 | 0.00341288625679289 |
COAD | RPS5 | 2.00837988822908 | 0.00355097651481629 |
LUAD | RPS5 | -1.37520271628786 | 0.0182052890234661 |
KIRP | RPS5 | -1.83720109968731 | 2.84211710095406e-05 |
KIRC | RPS5 | -2.18493604007757 | 6.35837741288648e-10 |
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Translation factor expression regulation through miRNA binding |
Cancer type | Gene | miRNA | TargetScan binding score (Context++ score percentile) | Coefficient | Pvalue |
Translation factor expression regulation through methylation in the promoter of Translation factor |
Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
Translation factor expression regulation through methylation in the gene body of Translation factor (positive regulation) |
Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
Translation factor expression regulation through copy number variation of Translation factor |
Cancer type | Gene | Coefficient | Pvalue |
MESO | RPS5 | 0.064164958 | 0.021232494 |
KIRC | RPS5 | -0.054323715 | 0.030131338 |
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Strongly correlated genes belong to cellular important gene groups with RPS5 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green) |
Cancer type | Gene group | Translation factor | Correlated gene | Coefficient | Pvalue |
ACC | Epifactor | RPS5 | TRIM28 | 0.826751999 | 6.32E-21 |
ACC | IUPHAR | RPS5 | TRIM28 | 0.826751999 | 6.32E-21 |
ACC | Kinase | RPS5 | TRIM28 | 0.826751999 | 6.32E-21 |
ACC | TF | RPS5 | ZNF581 | 0.823841824 | 1.13E-20 |
ACC | TSG | RPS5 | GLTSCR2 | 0.817174957 | 4.14E-20 |
CESC | Cell metabolism gene | RPS5 | SNRPD2 | 0.813830391 | 4.06E-74 |
CESC | TF | RPS5 | ZNF581 | 0.835753043 | 1.18E-81 |
CHOL | Cell metabolism gene | RPS5 | SNRPD2 | 0.841619855 | 4.46E-13 |
CHOL | Epifactor | RPS5 | FBL | 0.831523378 | 1.51E-12 |
CHOL | TF | RPS5 | ZNF581 | 0.845779673 | 2.63E-13 |
CHOL | TSG | RPS5 | GNB2L1 | 0.8177511 | 7.07E-12 |
CHOL | TSG | RPS5 | GLTSCR2 | 0.864442004 | 2.00E-14 |
DLBC | Cell metabolism gene | RPS5 | ATP5G1 | 0.803566615 | 6.21E-12 |
DLBC | Cell metabolism gene | RPS5 | EXOSC5 | 0.804179029 | 5.82E-12 |
DLBC | Cell metabolism gene | RPS5 | MIF | 0.806932178 | 4.34E-12 |
DLBC | Cell metabolism gene | RPS5 | TOMM22 | 0.810064847 | 3.09E-12 |
DLBC | Cell metabolism gene | RPS5 | PPP2R1A | 0.820108544 | 9.94E-13 |
DLBC | Cell metabolism gene | RPS5 | SNRPB | 0.820571287 | 9.42E-13 |
DLBC | Cell metabolism gene | RPS5 | TIMM50 | 0.825780114 | 5.08E-13 |
DLBC | Cell metabolism gene | RPS5 | GEMIN7 | 0.834451452 | 1.73E-13 |
DLBC | Cell metabolism gene | RPS5 | TIMM9 | 0.83604345 | 1.41E-13 |
DLBC | Cell metabolism gene | RPS5 | TIMM13 | 0.850598641 | 1.97E-14 |
DLBC | Cell metabolism gene | RPS5 | NME2 | 0.854181138 | 1.17E-14 |
DLBC | Cell metabolism gene | RPS5 | SNRPD2 | 0.885724616 | 6.13E-17 |
DLBC | CGC | RPS5 | PPP2R1A | 0.820108544 | 9.94E-13 |
DLBC | CGC | RPS5 | NTHL1 | 0.822517859 | 7.50E-13 |
DLBC | Epifactor | RPS5 | EXOSC5 | 0.804179029 | 5.82E-12 |
DLBC | Epifactor | RPS5 | PRPF31 | 0.841988788 | 6.47E-14 |
DLBC | Epifactor | RPS5 | RUVBL2 | 0.877201543 | 2.91E-16 |
DLBC | Epifactor | RPS5 | FBL | 0.908982991 | 4.23E-19 |
DLBC | IUPHAR | RPS5 | SLC25A3 | 0.835272069 | 1.56E-13 |
DLBC | TF | RPS5 | ZNF581 | 0.84080433 | 7.58E-14 |
DLBC | TF | RPS5 | NME2 | 0.854181138 | 1.17E-14 |
DLBC | TSG | RPS5 | GLTSCR2 | 0.865578299 | 2.05E-15 |
DLBC | TSG | RPS5 | GNB2L1 | 0.87120537 | 8.16E-16 |
GBM | Cell metabolism gene | RPS5 | SSR2 | 0.801668189 | 7.79E-40 |
GBM | Cell metabolism gene | RPS5 | ZNRD1 | 0.802560228 | 5.53E-40 |
GBM | Cell metabolism gene | RPS5 | AHCY | 0.80334499 | 4.09E-40 |
GBM | Cell metabolism gene | RPS5 | PSMD8 | 0.806717666 | 1.10E-40 |
GBM | Cell metabolism gene | RPS5 | LSM2 | 0.811207445 | 1.83E-41 |
GBM | Cell metabolism gene | RPS5 | GEMIN7 | 0.813737212 | 6.51E-42 |
GBM | Cell metabolism gene | RPS5 | SNRPD2 | 0.886027895 | 1.22E-58 |
GBM | Epifactor | RPS5 | PRMT1 | 0.823646594 | 9.81E-44 |
GBM | IUPHAR | RPS5 | AHCY | 0.80334499 | 4.09E-40 |
GBM | IUPHAR | RPS5 | PRMT1 | 0.823646594 | 9.81E-44 |
GBM | TF | RPS5 | ZNF581 | 0.807299455 | 8.72E-41 |
GBM | TF | RPS5 | ZNF627 | 0.812117467 | 1.26E-41 |
KICH | Cell metabolism gene | RPS5 | SNRPD2 | 0.843379958 | 9.74E-26 |
KIRP | TF | RPS5 | ZNF581 | 0.841492842 | 7.77E-88 |
LGG | Epifactor | RPS5 | FBL | 0.843222136 | 1.91E-144 |
LGG | TF | RPS5 | ZNF581 | 0.807173185 | 5.82E-123 |
LIHC | Epifactor | RPS5 | FBL | 0.833388689 | 1.79E-110 |
LIHC | TF | RPS5 | ZNF581 | 0.854164816 | 1.25E-121 |
MESO | TF | RPS5 | ZNF581 | 0.827477275 | 5.14E-23 |
PCPG | Epifactor | RPS5 | FBL | 0.83399637 | 1.18E-49 |
PCPG | TSG | RPS5 | GLTSCR2 | 0.803262121 | 1.71E-43 |
PRAD | Epifactor | RPS5 | FBL | 0.83663369 | 2.28E-145 |
PRAD | TF | RPS5 | ZNF581 | 0.836983245 | 1.34E-145 |
PRAD | TSG | RPS5 | GNB2L1 | 0.880837435 | 4.19E-180 |
SKCM | TF | RPS5 | ZNF581 | 0.82696595 | 4.11E-120 |
TGCT | Epifactor | RPS5 | FBL | 0.824885368 | 5.50E-40 |
THYM | Cell metabolism gene | RPS5 | UCKL1 | 0.800945422 | 1.68E-28 |
THYM | Cell metabolism gene | RPS5 | MIF | 0.803214836 | 9.06E-29 |
THYM | Cell metabolism gene | RPS5 | DPM3 | 0.803253715 | 8.96E-29 |
THYM | Cell metabolism gene | RPS5 | PSMD13 | 0.804688616 | 6.05E-29 |
THYM | Cell metabolism gene | RPS5 | PSME1 | 0.807342337 | 2.90E-29 |
THYM | Cell metabolism gene | RPS5 | ALG3 | 0.807385774 | 2.86E-29 |
THYM | Cell metabolism gene | RPS5 | MTX1 | 0.808465661 | 2.12E-29 |
THYM | Cell metabolism gene | RPS5 | HMOX2 | 0.808738692 | 1.96E-29 |
THYM | Cell metabolism gene | RPS5 | TOMM40 | 0.810023014 | 1.36E-29 |
THYM | Cell metabolism gene | RPS5 | NOP56 | 0.812846215 | 6.07E-30 |
THYM | Cell metabolism gene | RPS5 | GCDH | 0.816724817 | 1.96E-30 |
THYM | Cell metabolism gene | RPS5 | FPGS | 0.81720408 | 1.70E-30 |
THYM | Cell metabolism gene | RPS5 | IDH3B | 0.819390864 | 8.83E-31 |
THYM | Cell metabolism gene | RPS5 | PSMD4 | 0.819900688 | 7.58E-31 |
THYM | Cell metabolism gene | RPS5 | LSM2 | 0.82054827 | 6.23E-31 |
THYM | Cell metabolism gene | RPS5 | POLE4 | 0.820918678 | 5.57E-31 |
THYM | Cell metabolism gene | RPS5 | POLR2E | 0.822225562 | 3.74E-31 |
THYM | Cell metabolism gene | RPS5 | TIMM10 | 0.822450155 | 3.49E-31 |
THYM | Cell metabolism gene | RPS5 | SRM | 0.823120059 | 2.84E-31 |
THYM | Cell metabolism gene | RPS5 | OAZ1 | 0.824676225 | 1.76E-31 |
THYM | Cell metabolism gene | RPS5 | ITPA | 0.825099268 | 1.54E-31 |
THYM | Cell metabolism gene | RPS5 | SNRPE | 0.825268021 | 1.46E-31 |
THYM | Cell metabolism gene | RPS5 | DTYMK | 0.825775184 | 1.25E-31 |
THYM | Cell metabolism gene | RPS5 | PFDN5 | 0.825897124 | 1.20E-31 |
THYM | Cell metabolism gene | RPS5 | EBP | 0.829080468 | 4.39E-32 |
THYM | Cell metabolism gene | RPS5 | PTGES2 | 0.829225755 | 4.19E-32 |
THYM | Cell metabolism gene | RPS5 | NANS | 0.832223696 | 1.59E-32 |
THYM | Cell metabolism gene | RPS5 | PSMD8 | 0.833975528 | 8.97E-33 |
THYM | Cell metabolism gene | RPS5 | POLR2F | 0.835903423 | 4.73E-33 |
THYM | Cell metabolism gene | RPS5 | GEMIN7 | 0.836515445 | 3.85E-33 |
THYM | Cell metabolism gene | RPS5 | TALDO1 | 0.837746292 | 2.54E-33 |
THYM | Cell metabolism gene | RPS5 | APRT | 0.838942158 | 1.70E-33 |
THYM | Cell metabolism gene | RPS5 | HMBS | 0.839558337 | 1.37E-33 |
THYM | Cell metabolism gene | RPS5 | MVD | 0.841823688 | 6.28E-34 |
THYM | Cell metabolism gene | RPS5 | POLR2H | 0.84210826 | 5.69E-34 |
THYM | Cell metabolism gene | RPS5 | GUK1 | 0.842265383 | 5.39E-34 |
THYM | Cell metabolism gene | RPS5 | TIMM8B | 0.842828685 | 4.42E-34 |
THYM | Cell metabolism gene | RPS5 | POLR2I | 0.843282378 | 3.77E-34 |
THYM | Cell metabolism gene | RPS5 | GMPPA | 0.84588821 | 1.50E-34 |
THYM | Cell metabolism gene | RPS5 | DPM2 | 0.849186426 | 4.53E-35 |
THYM | Cell metabolism gene | RPS5 | PSMB3 | 0.850008004 | 3.35E-35 |
THYM | Cell metabolism gene | RPS5 | PSMC3 | 0.851799917 | 1.72E-35 |
THYM | Cell metabolism gene | RPS5 | FAU | 0.85804305 | 1.58E-36 |
THYM | Cell metabolism gene | RPS5 | EXOSC5 | 0.861203904 | 4.52E-37 |
THYM | Cell metabolism gene | RPS5 | TOMM22 | 0.862802797 | 2.37E-37 |
THYM | Cell metabolism gene | RPS5 | PMPCA | 0.863687121 | 1.65E-37 |
THYM | Cell metabolism gene | RPS5 | IMPDH2 | 0.866021939 | 6.31E-38 |
THYM | Cell metabolism gene | RPS5 | ACOT8 | 0.866420357 | 5.34E-38 |
THYM | Cell metabolism gene | RPS5 | PSMB7 | 0.869233585 | 1.62E-38 |
THYM | Cell metabolism gene | RPS5 | TIMM50 | 0.877941549 | 3.40E-40 |
THYM | Cell metabolism gene | RPS5 | SSR2 | 0.882708017 | 3.61E-41 |
THYM | Cell metabolism gene | RPS5 | EXOSC4 | 0.883593132 | 2.36E-41 |
THYM | Cell metabolism gene | RPS5 | PGLS | 0.886861823 | 4.72E-42 |
THYM | Cell metabolism gene | RPS5 | POLD2 | 0.888139611 | 2.48E-42 |
THYM | Cell metabolism gene | RPS5 | SLC27A5 | 0.892423216 | 2.72E-43 |
THYM | Cell metabolism gene | RPS5 | SNRPD2 | 0.90720109 | 6.02E-47 |
THYM | Cell metabolism gene | RPS5 | TIMM13 | 0.923883068 | 6.84E-52 |
THYM | CGC | RPS5 | ASPSCR1 | 0.809403524 | 1.62E-29 |
THYM | CGC | RPS5 | RBM10 | 0.845150404 | 1.95E-34 |
THYM | CGC | RPS5 | SDHAF2 | 0.850765037 | 2.53E-35 |
THYM | CGC | RPS5 | TFPT | 0.866501738 | 5.16E-38 |
THYM | Epifactor | RPS5 | PPP4C | 0.812904541 | 5.97E-30 |
THYM | Epifactor | RPS5 | PAF1 | 0.813596803 | 4.89E-30 |
THYM | Epifactor | RPS5 | ZNHIT1 | 0.823086383 | 2.87E-31 |
THYM | Epifactor | RPS5 | RUVBL2 | 0.830049693 | 3.22E-32 |
THYM | Epifactor | RPS5 | C17orf49 | 0.832207233 | 1.60E-32 |
THYM | Epifactor | RPS5 | TAF10 | 0.835770679 | 4.94E-33 |
THYM | Epifactor | RPS5 | SIRT6 | 0.840369595 | 1.04E-33 |
THYM | Epifactor | RPS5 | LAS1L | 0.850857643 | 2.45E-35 |
THYM | Epifactor | RPS5 | RRP8 | 0.852663726 | 1.25E-35 |
THYM | Epifactor | RPS5 | MBD3 | 0.85384766 | 7.97E-36 |
THYM | Epifactor | RPS5 | PRMT1 | 0.858966186 | 1.10E-36 |
THYM | Epifactor | RPS5 | NOC2L | 0.859746034 | 8.09E-37 |
THYM | Epifactor | RPS5 | EXOSC5 | 0.861203904 | 4.52E-37 |
THYM | Epifactor | RPS5 | TFPT | 0.866501738 | 5.16E-38 |
THYM | Epifactor | RPS5 | BRMS1 | 0.878964665 | 2.12E-40 |
THYM | Epifactor | RPS5 | EXOSC4 | 0.883593132 | 2.36E-41 |
THYM | Epifactor | RPS5 | PRPF31 | 0.892958431 | 2.05E-43 |
THYM | Epifactor | RPS5 | FBL | 0.943644214 | 1.82E-59 |
THYM | IUPHAR | RPS5 | HMOX2 | 0.808738692 | 1.96E-29 |
THYM | IUPHAR | RPS5 | PTGES2 | 0.829225755 | 4.19E-32 |
THYM | IUPHAR | RPS5 | SIRT6 | 0.840369595 | 1.04E-33 |
THYM | IUPHAR | RPS5 | MVD | 0.841823688 | 6.28E-34 |
THYM | IUPHAR | RPS5 | EGLN2 | 0.850891664 | 2.42E-35 |
THYM | IUPHAR | RPS5 | PRMT1 | 0.858966186 | 1.10E-36 |
THYM | IUPHAR | RPS5 | IMPDH2 | 0.866021939 | 6.31E-38 |
THYM | IUPHAR | RPS5 | SLC27A5 | 0.892423216 | 2.72E-43 |
THYM | Kinase | RPS5 | ADCK4 | 0.836580219 | 3.77E-33 |
THYM | TF | RPS5 | USF1 | 0.801854191 | 1.31E-28 |
THYM | TF | RPS5 | ZNF688 | 0.803197221 | 9.10E-29 |
THYM | TF | RPS5 | ZNF428 | 0.807689598 | 2.63E-29 |
THYM | TF | RPS5 | ZNF524 | 0.808247308 | 2.25E-29 |
THYM | TF | RPS5 | ZNF787 | 0.833075956 | 1.21E-32 |
THYM | TF | RPS5 | MBD3 | 0.85384766 | 7.97E-36 |
THYM | TF | RPS5 | REXO4 | 0.860275653 | 6.55E-37 |
THYM | TF | RPS5 | ZNF581 | 0.909584503 | 1.36E-47 |
THYM | TSG | RPS5 | NPRL2 | 0.804824958 | 5.83E-29 |
THYM | TSG | RPS5 | STUB1 | 0.827207303 | 7.96E-32 |
THYM | TSG | RPS5 | PHB | 0.828964026 | 4.56E-32 |
THYM | TSG | RPS5 | GADD45GIP1 | 0.838598102 | 1.91E-33 |
THYM | TSG | RPS5 | SIRT6 | 0.840369595 | 1.04E-33 |
THYM | TSG | RPS5 | GLTSCR2 | 0.858365378 | 1.39E-36 |
THYM | TSG | RPS5 | GNB2L1 | 0.867447642 | 3.47E-38 |
THYM | TSG | RPS5 | BRMS1 | 0.878964665 | 2.12E-40 |
THYM | TSG | RPS5 | TSSC4 | 0.893995845 | 1.18E-43 |
UCS | Cell metabolism gene | RPS5 | UCKL1 | 0.800945422 | 1.68E-28 |
UCS | Cell metabolism gene | RPS5 | MIF | 0.803214836 | 9.06E-29 |
UCS | Cell metabolism gene | RPS5 | DPM3 | 0.803253715 | 8.96E-29 |
UCS | Cell metabolism gene | RPS5 | PSMD13 | 0.804688616 | 6.05E-29 |
UCS | Cell metabolism gene | RPS5 | PSME1 | 0.807342337 | 2.90E-29 |
UCS | Cell metabolism gene | RPS5 | ALG3 | 0.807385774 | 2.86E-29 |
UCS | Cell metabolism gene | RPS5 | MTX1 | 0.808465661 | 2.12E-29 |
UCS | Cell metabolism gene | RPS5 | HMOX2 | 0.808738692 | 1.96E-29 |
UCS | Cell metabolism gene | RPS5 | TOMM40 | 0.810023014 | 1.36E-29 |
UCS | Cell metabolism gene | RPS5 | NOP56 | 0.812846215 | 6.07E-30 |
UCS | Cell metabolism gene | RPS5 | GCDH | 0.816724817 | 1.96E-30 |
UCS | Cell metabolism gene | RPS5 | FPGS | 0.81720408 | 1.70E-30 |
UCS | Cell metabolism gene | RPS5 | IDH3B | 0.819390864 | 8.83E-31 |
UCS | Cell metabolism gene | RPS5 | PSMD4 | 0.819900688 | 7.58E-31 |
UCS | Cell metabolism gene | RPS5 | LSM2 | 0.82054827 | 6.23E-31 |
UCS | Cell metabolism gene | RPS5 | POLE4 | 0.820918678 | 5.57E-31 |
UCS | Cell metabolism gene | RPS5 | POLR2E | 0.822225562 | 3.74E-31 |
UCS | Cell metabolism gene | RPS5 | TIMM10 | 0.822450155 | 3.49E-31 |
UCS | Cell metabolism gene | RPS5 | SRM | 0.823120059 | 2.84E-31 |
UCS | Cell metabolism gene | RPS5 | OAZ1 | 0.824676225 | 1.76E-31 |
UCS | Cell metabolism gene | RPS5 | ITPA | 0.825099268 | 1.54E-31 |
UCS | Cell metabolism gene | RPS5 | SNRPE | 0.825268021 | 1.46E-31 |
UCS | Cell metabolism gene | RPS5 | DTYMK | 0.825775184 | 1.25E-31 |
UCS | Cell metabolism gene | RPS5 | PFDN5 | 0.825897124 | 1.20E-31 |
UCS | Cell metabolism gene | RPS5 | EBP | 0.829080468 | 4.39E-32 |
UCS | Cell metabolism gene | RPS5 | PTGES2 | 0.829225755 | 4.19E-32 |
UCS | Cell metabolism gene | RPS5 | NANS | 0.832223696 | 1.59E-32 |
UCS | Cell metabolism gene | RPS5 | PSMD8 | 0.833975528 | 8.97E-33 |
UCS | Cell metabolism gene | RPS5 | POLR2F | 0.835903423 | 4.73E-33 |
UCS | Cell metabolism gene | RPS5 | GEMIN7 | 0.836515445 | 3.85E-33 |
UCS | Cell metabolism gene | RPS5 | TALDO1 | 0.837746292 | 2.54E-33 |
UCS | Cell metabolism gene | RPS5 | APRT | 0.838942158 | 1.70E-33 |
UCS | Cell metabolism gene | RPS5 | HMBS | 0.839558337 | 1.37E-33 |
UCS | Cell metabolism gene | RPS5 | MVD | 0.841823688 | 6.28E-34 |
UCS | Cell metabolism gene | RPS5 | POLR2H | 0.84210826 | 5.69E-34 |
UCS | Cell metabolism gene | RPS5 | GUK1 | 0.842265383 | 5.39E-34 |
UCS | Cell metabolism gene | RPS5 | TIMM8B | 0.842828685 | 4.42E-34 |
UCS | Cell metabolism gene | RPS5 | POLR2I | 0.843282378 | 3.77E-34 |
UCS | Cell metabolism gene | RPS5 | GMPPA | 0.84588821 | 1.50E-34 |
UCS | Cell metabolism gene | RPS5 | DPM2 | 0.849186426 | 4.53E-35 |
UCS | Cell metabolism gene | RPS5 | PSMB3 | 0.850008004 | 3.35E-35 |
UCS | Cell metabolism gene | RPS5 | PSMC3 | 0.851799917 | 1.72E-35 |
UCS | Cell metabolism gene | RPS5 | FAU | 0.85804305 | 1.58E-36 |
UCS | Cell metabolism gene | RPS5 | EXOSC5 | 0.861203904 | 4.52E-37 |
UCS | Cell metabolism gene | RPS5 | TOMM22 | 0.862802797 | 2.37E-37 |
UCS | Cell metabolism gene | RPS5 | PMPCA | 0.863687121 | 1.65E-37 |
UCS | Cell metabolism gene | RPS5 | IMPDH2 | 0.866021939 | 6.31E-38 |
UCS | Cell metabolism gene | RPS5 | ACOT8 | 0.866420357 | 5.34E-38 |
UCS | Cell metabolism gene | RPS5 | PSMB7 | 0.869233585 | 1.62E-38 |
UCS | Cell metabolism gene | RPS5 | TIMM50 | 0.877941549 | 3.40E-40 |
UCS | Cell metabolism gene | RPS5 | SSR2 | 0.882708017 | 3.61E-41 |
UCS | Cell metabolism gene | RPS5 | EXOSC4 | 0.883593132 | 2.36E-41 |
UCS | Cell metabolism gene | RPS5 | PGLS | 0.886861823 | 4.72E-42 |
UCS | Cell metabolism gene | RPS5 | POLD2 | 0.888139611 | 2.48E-42 |
UCS | Cell metabolism gene | RPS5 | SLC27A5 | 0.892423216 | 2.72E-43 |
UCS | Cell metabolism gene | RPS5 | SNRPD2 | 0.90720109 | 6.02E-47 |
UCS | Cell metabolism gene | RPS5 | TIMM13 | 0.923883068 | 6.84E-52 |
UCS | CGC | RPS5 | ASPSCR1 | 0.809403524 | 1.62E-29 |
UCS | CGC | RPS5 | RBM10 | 0.845150404 | 1.95E-34 |
UCS | CGC | RPS5 | SDHAF2 | 0.850765037 | 2.53E-35 |
UCS | CGC | RPS5 | TFPT | 0.866501738 | 5.16E-38 |
UCS | Epifactor | RPS5 | PPP4C | 0.812904541 | 5.97E-30 |
UCS | Epifactor | RPS5 | PAF1 | 0.813596803 | 4.89E-30 |
UCS | Epifactor | RPS5 | ZNHIT1 | 0.823086383 | 2.87E-31 |
UCS | Epifactor | RPS5 | RUVBL2 | 0.830049693 | 3.22E-32 |
UCS | Epifactor | RPS5 | C17orf49 | 0.832207233 | 1.60E-32 |
UCS | Epifactor | RPS5 | TAF10 | 0.835770679 | 4.94E-33 |
UCS | Epifactor | RPS5 | SIRT6 | 0.840369595 | 1.04E-33 |
UCS | Epifactor | RPS5 | LAS1L | 0.850857643 | 2.45E-35 |
UCS | Epifactor | RPS5 | RRP8 | 0.852663726 | 1.25E-35 |
UCS | Epifactor | RPS5 | MBD3 | 0.85384766 | 7.97E-36 |
UCS | Epifactor | RPS5 | PRMT1 | 0.858966186 | 1.10E-36 |
UCS | Epifactor | RPS5 | NOC2L | 0.859746034 | 8.09E-37 |
UCS | Epifactor | RPS5 | EXOSC5 | 0.861203904 | 4.52E-37 |
UCS | Epifactor | RPS5 | TFPT | 0.866501738 | 5.16E-38 |
UCS | Epifactor | RPS5 | BRMS1 | 0.878964665 | 2.12E-40 |
UCS | Epifactor | RPS5 | EXOSC4 | 0.883593132 | 2.36E-41 |
UCS | Epifactor | RPS5 | PRPF31 | 0.892958431 | 2.05E-43 |
UCS | Epifactor | RPS5 | FBL | 0.943644214 | 1.82E-59 |
UCS | IUPHAR | RPS5 | HMOX2 | 0.808738692 | 1.96E-29 |
UCS | IUPHAR | RPS5 | PTGES2 | 0.829225755 | 4.19E-32 |
UCS | IUPHAR | RPS5 | SIRT6 | 0.840369595 | 1.04E-33 |
UCS | IUPHAR | RPS5 | MVD | 0.841823688 | 6.28E-34 |
UCS | IUPHAR | RPS5 | EGLN2 | 0.850891664 | 2.42E-35 |
UCS | IUPHAR | RPS5 | PRMT1 | 0.858966186 | 1.10E-36 |
UCS | IUPHAR | RPS5 | IMPDH2 | 0.866021939 | 6.31E-38 |
UCS | IUPHAR | RPS5 | SLC27A5 | 0.892423216 | 2.72E-43 |
UCS | Kinase | RPS5 | ADCK4 | 0.836580219 | 3.77E-33 |
UCS | TF | RPS5 | USF1 | 0.801854191 | 1.31E-28 |
UCS | TF | RPS5 | ZNF688 | 0.803197221 | 9.10E-29 |
UCS | TF | RPS5 | ZNF428 | 0.807689598 | 2.63E-29 |
UCS | TF | RPS5 | ZNF524 | 0.808247308 | 2.25E-29 |
UCS | TF | RPS5 | ZNF787 | 0.833075956 | 1.21E-32 |
UCS | TF | RPS5 | MBD3 | 0.85384766 | 7.97E-36 |
UCS | TF | RPS5 | REXO4 | 0.860275653 | 6.55E-37 |
UCS | TF | RPS5 | ZNF581 | 0.909584503 | 1.36E-47 |
UCS | TSG | RPS5 | NPRL2 | 0.804824958 | 5.83E-29 |
UCS | TSG | RPS5 | STUB1 | 0.827207303 | 7.96E-32 |
UCS | TSG | RPS5 | PHB | 0.828964026 | 4.56E-32 |
UCS | TSG | RPS5 | GADD45GIP1 | 0.838598102 | 1.91E-33 |
UCS | TSG | RPS5 | SIRT6 | 0.840369595 | 1.04E-33 |
UCS | TSG | RPS5 | GLTSCR2 | 0.858365378 | 1.39E-36 |
UCS | TSG | RPS5 | GNB2L1 | 0.867447642 | 3.47E-38 |
UCS | TSG | RPS5 | BRMS1 | 0.878964665 | 2.12E-40 |
UCS | TSG | RPS5 | TSSC4 | 0.893995845 | 1.18E-43 |
UVM | Cell metabolism gene | RPS5 | SLC27A5 | 0.803577158 | 2.95E-19 |
UVM | Cell metabolism gene | RPS5 | SLC25A6 | 0.828031547 | 2.72E-21 |
UVM | Cell metabolism gene | RPS5 | IMPDH2 | 0.841716904 | 1.41E-22 |
UVM | Cell metabolism gene | RPS5 | SSR2 | 0.87303169 | 4.84E-26 |
UVM | Cell metabolism gene | RPS5 | FAU | 0.875005941 | 2.73E-26 |
UVM | CGC | RPS5 | TRAF7 | 0.822794011 | 7.87E-21 |
UVM | Epifactor | RPS5 | TRIM28 | 0.833312642 | 8.95E-22 |
UVM | Epifactor | RPS5 | FBL | 0.932002046 | 4.04E-36 |
UVM | IUPHAR | RPS5 | SLC27A5 | 0.803577158 | 2.95E-19 |
UVM | IUPHAR | RPS5 | SLC25A6 | 0.828031547 | 2.72E-21 |
UVM | IUPHAR | RPS5 | TRIM28 | 0.833312642 | 8.95E-22 |
UVM | IUPHAR | RPS5 | IMPDH2 | 0.841716904 | 1.41E-22 |
UVM | Kinase | RPS5 | TRIM28 | 0.833312642 | 8.95E-22 |
UVM | TF | RPS5 | REXO4 | 0.802710995 | 3.44E-19 |
UVM | TF | RPS5 | ZNF581 | 0.88214779 | 3.17E-27 |
UVM | TSG | RPS5 | GNB2L1 | 0.912069516 | 6.22E-32 |
UVM | TSG | RPS5 | GLTSCR2 | 0.914318703 | 2.36E-32 |
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Protein 3D structure Visit iCn3D. |
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Protein-protein interaction networks * Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
Overlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
* Edge colors based on TCGA cancer types. |
* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P)) |
Cancer type | Translation factor | Interacting protein coding gene | FC | adj.pval |
KIRP | RPS5 | RPL18A | -1.51651392808885 | 0.00016188295558095 |
KICH | RPS5 | RPS27A | 1.75396693785956 | 0.000187873840332031 |
KIRP | RPS5 | RPS16 | -1.35957043617517 | 0.00019507110118866 |
COAD | RPS5 | RPS3 | 1.48730375143014 | 0.000411599874496461 |
KIRP | RPS5 | RPS11 | -1.01861570565103 | 0.00105937570333481 |
LIHC | RPS5 | RPL8 | -4.84588284974558 | 0.00110314154326131 |
LIHC | RPS5 | FBL | -1.52440225286776 | 0.00135114801221843 |
ESCA | RPS5 | FBL | -3.20818772056068 | 0.001953125 |
PRAD | RPS5 | RPL18A | 1.40600175748499 | 0.00205137828390396 |
KICH | RPS5 | RPL19 | 1.36901182894089 | 0.00250792503356934 |
KICH | RPS5 | RPS12 | 1.26997381758431 | 0.00308787822723389 |
LUAD | RPS5 | RPL19 | -1.31398026615725 | 0.00993159558412698 |
THCA | RPS5 | RPS16 | -6.16322798156577 | 0.0115764821363307 |
STAD | RPS5 | FBL | -3.09283533727097 | 0.0118026207201183 |
BLCA | RPS5 | RPS12 | -1.47804673440421 | 0.0204124450683594 |
BLCA | RPS5 | RPS27A | -1.04747470069188 | 0.0258216857910156 |
HNSC | RPS5 | RPS3 | -4.73505819095135 | 0.0273726439852453 |
COAD | RPS5 | RPS11 | 1.35307548998204 | 0.0312207043170929 |
LUSC | RPS5 | RPL19 | -2.14669889516666 | 0.044366810398747 |
KIRC | RPS5 | RPL19 | -2.73485271276676 | 1.33980982873695e-10 |
BRCA | RPS5 | RPS12 | -4.91239327478244 | 1.85340619742495e-09 |
KIRC | RPS5 | RPL35 | -1.06475238059392 | 2.72286325678163e-08 |
KIRC | RPS5 | FBL | -1.48689317058746 | 4.1409317182671e-10 |
KIRC | RPS5 | RPL8 | -1.18252459971773 | 5.64962994208288e-07 |
KIRP | RPS5 | RPL8 | -1.53003692350119 | 6.0301274061203e-05 |
LUAD | RPS5 | FBL | -1.63102492950895 | 7.73559543739736e-08 |
KIRC | RPS5 | RPS16 | -1.66149869889384 | 7.8509870430991e-09 |
BRCA | RPS5 | RPS27A | -4.28512148200424 | 7.8788217967112e-14 |
KIRP | RPS5 | RPL35 | -1.52981101975496 | 9.0546440333128e-05 |
KIRC | RPS5 | RPS3 | -1.29560847926387 | 9.05905681935088e-10 |
KIRC | RPS5 | RPL18A | -4.43079304960843 | 9.2516163152192e-11 |
Protein-protein interactors with this translation factor (BIOGRID-3.4.160) |
PPI interactors with RPS5 |
SRRM1, SRRM2, AGO4, RICTOR, VHL, RAD21, SIRT7, CUL3, CUL5, CDK2, CUL1, CAND1, PIK3R2, CRK, RPS4X, UBE2D3, RPL10A, RPL12, RPL15, RPL18A, RPL18, RPL19, RPL21, RPL24, RPL30, RPL31, RPL5, RPL6, RPL7A, RPL9, RPS11, RPS13, RPS15A, RPS16, RPS19, RPS23, RPS24, RPS2, RPS3A, RPS3, RPS6, RPS8, RPSA, RPL4, RPS7, RPL11, RPL7, RPL23A, RPL14, RPS14, RPL37A, RPLP2, RPL23, RPS26, RPS12, RPLP1, RPLP0, RPL17, RPS21, RPS27A, EEF1A1, EEF2, NOP56, FBL, GNL3, DHX9, NCL, NHP2L1, TUFM, HNRNPM, HNRNPA1, EIF6, RPL10L, RPLP0P6, RBM14, SNRPA1, LOC255308, NOP2, ATP6V1B2, CA9, SMURF1, FN1, VCAM1, UBL4A, ITGA4, PAN2, NPM1, ADRB2, FBXO6, EIF3CL, GNB2L1, LARP1, NCAPD2, PNO1, RPS10, RPS20, RPS25, RPS27, RPS28, RPS29, DYNC1H1, DYNC1I2, DYNC1LI2, DYNLL1, EIF2A, EIF3L, PRUNE2, RPS18, RPS9, TSR1, WIBG, rev, RPA3, RPA2, RPA1, AURKA, FUS, MOV10, NXF1, CUL7, UBC, HIST1H1A, NOL12, RPS6KB2, CANX, CLGN, GFM2, HBS1L, HNRNPK, KRR1, MRPL11, MRPL22, MRPL24, MRPS10, MSH2, NAT10, NOL6, POLR1A, RPL13A, RPL22, RPL27, RPL27A, RPL35, RPL38, RPL8, RPS15, LOC101929876, MRPL3, POLR1B, POLR2B, POLR2E, POLR3A, RPL10, RPL13, RPL26, RPL3, RPL35A, RPL36, SEC63, SPDL1, RRP7A, SEC61A1, SLC25A1, UBA52, WDR36, NTRK1, gag, XPO1, HNRNPU, Rpl35, Srp72, Rrbp1, GAN, MCM2, NF2, Ksr1, RC3H1, CDC73, RRS1, ZCRB1, HIST1H1T, H2AFX, CYLD, FOXA1, HEY1, BRCA1, HDAC6, ACO2, WDR77, CDK9, ARNT, COPE, CTNNB1, HDAC4, TGFB1, PRPF8, EFTUD2, AAR2, PIH1D1, CHD3, CHD4, RIOK1, HEXIM1, MEPCE, LARP7, MDM2, SENP2, SNAI1, RECQL4, ZBTB38, GPC1, ZFP36L2, MYC, METTL14, EIF4B, RC3H2, ACTC1, PHB, RBX1, NR2C2, PPP1CC, CTCF, HIST1H4A, LUCAT1, SNRNP70, ITFG1, HMGB1, BIRC3, NFX1, WWP2, SQSTM1, PLEKHA4, MAGEA3, YAP1, TFCP2, FANCD2, PTEN, HCVgp1, ZC3H18, NEK4, DUX4, CIT, ANLN, AURKB, CHMP4C, ECT2, KIF14, KIF20A, KIF23, PRC1, FASN, MKI67, LRRC59, INS, Rnf183, BRD4, RBM45, CIC, Apc2, FBP1, BKRF1, RIN3, SPOP, AR, PARK2, UFL1, DDRGK1, TRIM37, ATG7, FZR1, MYCBP2, WDR5, PAGE4, NUDCD2, PRR3, HIST1H2AM, FGF13, HIST1H1D, LIN28B, YBX2, DDX21, RPL23AP32, THAP3, H1FNT, ZNF668, FGF17, HIST1H1C, PURG, LLPH, H2AFB2, HIST1H1B, SRSF6, SRSF5, ABT1, SURF6, RPL26L1, LIN28A, UTP23, RSL1D1, ZNF346, FGFBP1, NEIL1, RPSAP58, HIST1H1E, BTF3, FBXW7, M, nsp6, UBE2N, RCHY1, CCNF, MAP1LC3B, N, SIRT6, PSMD9, KLF15, KLF16, KLF4, KLF5, KLF8, |
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Clinically associated variants from ClinVar. |
Gene | Chr | Position | RefSeq | VarSeq | RefSeeq | VarType | Pathogenic | Disease | VarInfo |
nsSNVs with sample frequency (size of circle) from TCGA 33 cancers. |
SNVs and Indels |
Gene | Cancer type | Chromosome | Start | End | RefSeeq | MutSeq | Mutation type | AAchange | # samples |
RPS5 | STAD | chr19 | 58904820 | 58904820 | C | T | Missense_Mutation | p.A138V | 4 |
RPS5 | BRCA | chr19 | 58904526 | 58904526 | G | A | Missense_Mutation | p.E98K | 4 |
RPS5 | CESC | chr19 | 58904396 | 58904396 | G | A | Silent | 3 | |
RPS5 | BLCA | chr19 | 58904758 | 58904758 | C | G | Missense_Mutation | 3 | |
RPS5 | BRCA | chr19 | 58899562 | 58899562 | T | C | Missense_Mutation | p.F20L | 3 |
RPS5 | BRCA | chr19 | 58904744 | 58904744 | G | C | Missense_Mutation | p.V113L | 3 |
RPS5 | BRCA | chr19 | 58904783 | 58904783 | A | G | Missense_Mutation | p.T126A | 3 |
RPS5 | SKCM | chr19 | 58906062 | 58906062 | C | T | Missense_Mutation | p.S187F | 3 |
RPS5 | ESCA | chr19 | 58904399 | 58904399 | G | T | Silent | p.R55R | 2 |
RPS5 | UCEC | chr19 | 58904549 | 58904549 | C | T | Silent | p.G105 | 2 |
RPS5 | CESC | chr19 | 58906057 | 58906057 | G | A | Silent | 2 | |
RPS5 | STAD | chr19 | 58904472 | 58904472 | G | A | Missense_Mutation | p.G80S | 2 |
RPS5 | TGCT | chr19 | 58904766 | 58904766 | G | T | Missense_Mutation | 2 | |
RPS5 | TGCT | chr19 | 58904766 | 58904766 | G | T | Missense_Mutation | p.G120V | 2 |
RPS5 | BLCA | chr19 | 58904758 | 58904758 | C | G | Missense_Mutation | p.I117M | 2 |
RPS5 | HNSC | chr19 | 58899511 | 58899511 | G | C | Missense_Mutation | p.E3Q | 2 |
RPS5 | LUAD | chr19 | 58904809 | 58904809 | G | A | Silent | p.V134V | 2 |
RPS5 | SKCM | chr19 | 58904729 | 58904729 | C | T | Missense_Mutation | p.P108S | 2 |
RPS5 | UCEC | chr19 | 58904471 | 58904471 | C | T | Silent | p.H79 | 2 |
RPS5 | ESCA | chr19 | 58904399 | 58904399 | G | T | Silent | 2 | |
RPS5 | UCEC | chr19 | 58904474 | 58904474 | C | A | Silent | p.G80 | 2 |
RPS5 | LUAD | chr19 | 58905907 | 58905907 | G | C | Missense_Mutation | p.R164P | 1 |
RPS5 | SKCM | chr19 | 58899606 | 58899606 | C | T | Silent | p.S34S | 1 |
RPS5 | LUAD | chr19 | 58904406 | 58904406 | G | A | Missense_Mutation | p.A58T | 1 |
RPS5 | GBM | chr19 | 58904370 | 58904370 | G | T | Missense_Mutation | p.A46S | 1 |
RPS5 | ACC | chr19 | 58905869 | 58905869 | C | A | Silent | p.I151I | 1 |
RPS5 | LUSC | chr19 | 58906108 | 58906108 | C | G | Silent | p.S202S | 1 |
RPS5 | CESC | chr19 | 58906057 | 58906057 | G | A | Silent | p.S185S | 1 |
RPS5 | GBM | chr19 | 58904836 | 58904836 | C | A | Silent | 1 | |
RPS5 | PAAD | chr19 | 58904398 | 58904398 | G | T | Missense_Mutation | 1 | |
RPS5 | CESC | chr19 | 58906057 | 58906057 | G | A | Silent | p.S185 | 1 |
RPS5 | STAD | chr19 | 58906110 | 58906110 | A | G | Missense_Mutation | p.N203S | 1 |
RPS5 | GBM | chr19 | 58899533 | 58899533 | C | T | Missense_Mutation | 1 | |
RPS5 | BLCA | chr19 | 58905891 | 58905891 | C | A | Missense_Mutation | 1 | |
RPS5 | PRAD | chr19 | 58904796 | 58904796 | G | A | Missense_Mutation | p.R130H | 1 |
RPS5 | COAD | chr19 | 58904396 | 58904396 | G | A | Silent | p.G54G | 1 |
RPS5 | GBM | chr19 | 58904370 | 58904370 | G | T | Missense_Mutation | 1 | |
RPS5 | BLCA | chr19 | 58904543 | 58904543 | C | T | Silent | 1 | |
RPS5 | SARC | chr19 | 58904510 | 58904510 | C | T | Silent | 1 | |
RPS5 | COAD | chr19 | 58904801 | 58904801 | G | A | Missense_Mutation | p.G132R | 1 |
RPS5 | HNSC | chr19 | 58899511 | 58899511 | G | C | Missense_Mutation | 1 | |
RPS5 | SARC | chr19 | 58904510 | 58904510 | C | T | Silent | p.I92I | 1 |
RPS5 | THYM | chr19 | 58905906 | 58905906 | C | T | Missense_Mutation | 1 | |
RPS5 | COAD | chr19 | 58906065 | 58906065 | A | G | Missense_Mutation | p.Y188C | 1 |
RPS5 | HNSC | chr19 | 58904798 | 58904798 | G | T | Missense_Mutation | 1 | |
RPS5 | SARC | chr19 | 58904844 | 58904844 | G | A | Missense_Mutation | p.R146H | 1 |
RPS5 | COAD | chr19 | 58906084 | 58906084 | C | T | Silent | p.D194D | 1 |
RPS5 | THYM | chr19 | 58905931 | 58905931 | G | T | Missense_Mutation | 1 | |
RPS5 | SARC | chr19 | 58904510 | 58904510 | C | T | Silent | p.I92 | 1 |
RPS5 | ESCA | chr19 | 58904399 | 58904399 | G | T | Silent | p.R55 | 1 |
RPS5 | THYM | chr19 | 58905938 | 58905938 | A | G | Silent | p.A174A | 1 |
RPS5 | ESCA | chr19 | 58904798 | 58904798 | G | A | Missense_Mutation | p.A131T | 1 |
RPS5 | LUAD | chr19 | 58899552 | 58899552 | C | T | Silent | p.D16D | 1 |
Copy number variation (CNV) of RPS5 * Click on the image to open the original image in a new window. |
Fusion gene breakpoints (product of the structural variants (SVs)) across RPS5 * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion genes with this translation factor from FusionGDB2.0. |
FusionGDB2 ID | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
102445 | N/A | BQ227834 | ACTG1 | chr17 | 79477287 | + | RPS5 | chr19 | 58898661 | + |
102445 | N/A | CF128579 | CD63 | chr12 | 56119614 | - | RPS5 | chr19 | 58904396 | + |
102445 | LUAD | TCGA-05-4398-01A | CLPTM1 | chr19 | 45458724 | + | RPS5 | chr19 | 58904726 | + |
102445 | N/A | BQ432456 | CTDSP1 | chr2 | 219264765 | + | RPS5 | chr19 | 58904350 | + |
102445 | N/A | BM971373 | DSE | chr6 | 116580306 | + | RPS5 | chr19 | 58906169 | - |
102445 | N/A | BG231158 | IFT46 | chr11 | 118419101 | + | RPS5 | chr19 | 58906167 | - |
102445 | N/A | BU175700 | MRPS21 | chr1 | 150280782 | + | RPS5 | chr19 | 58904724 | + |
102445 | PAAD | TCGA-IB-7885 | RPL23AP79 | chr19 | 59086955 | + | RPS5 | chr19 | 58904343 | + |
100956 | PRAD | TCGA-CH-5771-01A | RPS5 | chr19 | 58906170 | - | CALD1 | chr7 | 134430218 | + |
97057 | N/A | BG574864 | RPS5 | chr19 | 58906167 | + | CCDC129 | chr7 | 31693666 | + |
77972 | N/A | BG575270 | RPS5 | chr19 | 58906169 | + | CDH7 | chr18 | 63533540 | + |
77972 | N/A | BF337147 | RPS5 | chr19 | 58906168 | + | CLMN | chr14 | 95746325 | - |
102507 | CESC | TCGA-LP-A5U2-01A | RPS5 | chr19 | 58906170 | - | DDX21 | chr10 | 70723858 | + |
94838 | N/A | AA528326 | RPS5 | chr19 | 58904328 | - | DSE | chr6 | 116579851 | + |
94838 | N/A | AA877012 | RPS5 | chr19 | 58906171 | + | DSE | chr6 | 116579677 | - |
94838 | N/A | BF437270 | RPS5 | chr19 | 58905862 | - | DSE | chr6 | 116579611 | + |
94838 | N/A | BG031186 | RPS5 | chr19 | 58906171 | + | DSE | chr6 | 116579684 | - |
94838 | N/A | BM014279 | RPS5 | chr19 | 58906171 | + | DSE | chr6 | 116579639 | - |
94838 | N/A | CF123717 | RPS5 | chr19 | 58906165 | + | DSE | chr6 | 116579684 | - |
78381 | N/A | BF337460 | RPS5 | chr19 | 58906167 | + | DTNBP1 | chr6 | 15637088 | - |
103029 | STAD | TCGA-BR-4292 | RPS5 | chr19 | 58905962 | + | EEF2 | chr19 | 3980707 | - |
102493 | N/A | U50079 | RPS5 | chr19 | 58898660 | - | HDAC1 | chr1 | 32757757 | + |
97196 | N/A | CF272432 | RPS5 | chr19 | 58906171 | + | MFN1 | chr3 | 179078333 | + |
103124 | LAML | TCGA-AB-2874-03A | RPS5 | chr19 | 58905918 | + | MPO | chr17 | 56347363 | - |
77972 | N/A | AA535498 | RPS5 | chr19 | 58906171 | + | RAB41 | chrX | 69504089 | - |
102445 | N/A | EC459447 | RPS5 | chr19 | 58904826 | + | RPS5 | chr19 | 58904438 | + |
84556 | SARC | TCGA-MJ-A68H-01A | RPS5 | chr19 | 58899612 | + | SLC27A5 | chr19 | 59012777 | - |
90439 | N/A | BF339864 | RPS5 | chr19 | 58906167 | + | STIM2 | chr4 | 26873343 | - |
91991 | N/A | BG575553 | RPS5 | chr19 | 58906169 | + | TMEM246 | chr9 | 104266500 | - |
102445 | N/A | BG929094 | SPIN3 | chrX | 57017834 | - | RPS5 | chr19 | 58905861 | + |
102445 | N/A | AA533269 | TAB2 | chr6 | 149645982 | + | RPS5 | chr19 | 58906171 | - |
102445 | BRCA | TCGA-B6-A40B | TM6SF2 | chr19 | 19383929 | - | RPS5 | chr19 | 58905863 | + |
102445 | PAAD | TCGA-3A-A9J0 | ZNF584 | chr19 | 58913029 | + | RPS5 | chr19 | 58899504 | + |
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Kaplan-Meier plots with logrank tests of overall survival (OS) |
Cancer type | Translation factor | Coefficent | Hazard ratio | Wald test pval | Likelihool ratio pval | Logrank test pval | # samples |
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Differential gene expression between female and male. (Wilcoxon test, pval<0.05) |
Cancer type | Translation factor | pval | adj.p |
KIRC | RPS5 | 0.00253769109112375 | 0.071 |
COAD | RPS5 | 0.00641786815096913 | 0.17 |
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Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05) |
Cancer type | Translation factor | pval | adj.p |
LUSC | RPS5 | 0.0425286733559275 | 1 |
BRCA | RPS5 | 0.00286472908320581 | 0.095 |
PAAD | RPS5 | 0.0094276956613236 | 0.3 |
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Drugs targeting genes involved in this translation factor. (DrugBank Version 5.1.8 2021-05-08) |
UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Diseases associated with this translation factor. (DisGeNet 4.0) |
Disease ID | Disease Name | # PubMeds | Disease source |