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Center for Computational Systems Medicine
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Gene Summary

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Translation studies in PubMed

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Exon Skipping Events

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Expression

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Expression Regulation

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Associated Genes

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Protein 3D Structure

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Protein-Protein Interaction

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Mutations

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Prognostic Analysis

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Gender Association

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Age Association

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Related Drugs

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Related Diseases

Translation Factor: RPS9 (NCBI Gene ID:6203)


Gene Summary

check button Gene Summary
Gene InformationGene Name: RPS9
Gene ID: 6203
Gene Symbol

RPS9

Gene ID

6203

Gene Nameribosomal protein S9
SynonymsS9
Cytomap

19q13.42

Type of Geneprotein-coding
Description40S ribosomal protein S9small ribosomal subunit protein uS4
Modification date20200313
UniProtAcc

P46781


check button Child GO biological process term(s) under GO:0006412
GO IDGO term
GO:0006417Regulation of translation
GO:0005840Ribosome
GO:0045727Positive regulation of translation
GO:0002181Cytoplasmic translation
GO:0006412Translation


check button Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID


check button Inferred gene age of translation factor.
GeneInferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25
RPS9>1119.25


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Translation Studies in PubMed

check button We searched PubMed using 'RPS9[title] AND translation [title] AND human.'
GeneTitlePMID
RPS9..


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Exon Skipping Events

check buttonSkipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
For more annotations, please visit our ExonSkipDB.
all structure

check button Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ENSTExon skip start (DNA)Exon Skip end (DNA)ORF

check button Exon skipping position in the amino acid sequence.
ENSTExon skip start (DNA)Exon Skip end (DNA)Len(transcript seq)Exon skip start (mRNA)Exon Skip end (mRNA)Len(amino acid seq)Exon skip start (AA)Exon Skip end (AA)

check button Potentially (partially) lost protein functional features of UniProt.
UniProtAccExon skip start (AA)Exon Skip end (AA)Function feature start (AA)Function feature end (AA)Functional feature typeFunctional feature desc.


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Expression


check buttonGene expression level across TCGA pancancer
all structure

check buttonGene expression level across GTEx pantissue
all structure

check buttonExpression level of gene isoforms across TCGA pancancer
all structure

check buttonExpression level of gene isoforms across GTEx pantissue
all structure

check buttonCancer(tissue) type-specific expression level of Translation factor using z-score distriution
all structure

check buttonDifferential expression between tumor and matched normal (in the cancer types with more than 10 matched samples)
all structure
Cancer typeTranslation factorFCadj.pval
COADRPS91.186120144022350.0381683111190796
BRCARPS91.93314775463492.31299392089389e-07
KIRCRPS9-1.326808164409876.53264115309597e-07


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Expression Regulation


check buttonTranslation factor expression regulation through miRNA binding
Cancer typeGenemiRNATargetScan binding score (Context++ score percentile)CoefficientPvalue
DLBCRPS9hsa-miR-218-5p800.3155642923219240.0311713710863107
UVMRPS9hsa-miR-218-5p800.3185978578383640.00437572418638372


check buttonTranslation factor expression regulation through methylation in the promoter of Translation factor
all structure
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a
LIHCRPS9120.02320168914876890.1654029914529910.279364516129032-0.2463603766598460.250435156838695

check buttonTranslation factor expression regulation through methylation in the gene body of Translation factor (positive regulation)
all structure
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a

check buttonTranslation factor expression regulation through copy number variation of Translation factor
all structure
Cancer typeGeneCoefficientPvalue
KIRCRPS9-0.0709166480.00196807
THYMRPS90.0804354230.036976411

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Associated Genes


check button Strongly correlated genes belong to cellular important gene groups with RPS9 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green)
all structure
Cancer typeGene groupTranslation factorCorrelated geneCoefficientPvalue
BRCACell metabolism geneRPS9FAU0.8135247091.48E-288
BRCATSGRPS9GLTSCR20.8390316921e-323
CHOLCell metabolism geneRPS9TOMM70.8148916629.59E-12
CHOLCell metabolism geneRPS9PFDN50.8564566716.29E-14
CHOLTSGRPS9GLTSCR20.888090414.14E-16
DLBCCell metabolism geneRPS9TOMM70.8005029998.56E-12
DLBCCell metabolism geneRPS9LSM40.8024538716.98E-12
DLBCCell metabolism geneRPS9MIF0.8073926164.13E-12
DLBCCell metabolism geneRPS9PSMB60.8110874872.76E-12
DLBCCell metabolism geneRPS9PHPT10.812797252.29E-12
DLBCCell metabolism geneRPS9PTDSS20.8140943871.98E-12
DLBCCell metabolism geneRPS9POLR2I0.8167659741.46E-12
DLBCCell metabolism geneRPS9LSM20.8243746826.01E-13
DLBCCell metabolism geneRPS9PSMC50.8276674634.04E-13
DLBCCell metabolism geneRPS9PSMD130.8282489613.76E-13
DLBCCell metabolism geneRPS9POLR2F0.8370463221.24E-13
DLBCCell metabolism geneRPS9TOMM220.8415523546.86E-14
DLBCCell metabolism geneRPS9ECHS10.8440691264.88E-14
DLBCCell metabolism geneRPS9PGLS0.846348343.57E-14
DLBCCell metabolism geneRPS9PSMB30.8555242759.61E-15
DLBCCell metabolism geneRPS9TIMM90.862096633.55E-15
DLBCCell metabolism geneRPS9GEMIN70.8650886462.21E-15
DLBCCell metabolism geneRPS9TIMM130.8711111198.29E-16
DLBCCell metabolism geneRPS9GFER0.8795904111.91E-16
DLBCCell metabolism geneRPS9NME20.8853264736.61E-17
DLBCCell metabolism geneRPS9PFDN50.8879745113.98E-17
DLBCCell metabolism geneRPS9FAU0.8985644614.56E-18
DLBCCell metabolism geneRPS9SNRPD20.9107745162.73E-19
DLBCCGCRPS9MAP2K20.8094106353.32E-12
DLBCCGCRPS9NACA0.8247652145.74E-13
DLBCCGCRPS9NTHL10.8372474851.21E-13
DLBCEpifactorRPS9ANP32B0.8080216383.86E-12
DLBCEpifactorRPS9PAF10.8089375083.49E-12
DLBCEpifactorRPS9RBX10.8210397978.92E-13
DLBCEpifactorRPS9PRPF310.8230884247.01E-13
DLBCEpifactorRPS9SIRT60.8250773455.53E-13
DLBCEpifactorRPS9MBD30.8268733234.45E-13
DLBCEpifactorRPS9ZNHIT10.8278823343.94E-13
DLBCEpifactorRPS9DMAP10.8326419382.18E-13
DLBCEpifactorRPS9FBL0.8776003912.72E-16
DLBCIUPHARRPS9SLC25A30.807718613.99E-12
DLBCIUPHARRPS9MAP2K20.8094106353.32E-12
DLBCIUPHARRPS9PSMB60.8110874872.76E-12
DLBCIUPHARRPS9SIRT60.8250773455.53E-13
DLBCIUPHARRPS9SLC25A260.8341786291.79E-13
DLBCKinaseRPS9MAP2K20.8094106353.32E-12
DLBCTFRPS9PIN10.8041191385.86E-12
DLBCTFRPS9ZNF4440.8138119052.04E-12
DLBCTFRPS9ZNF4280.8190757461.12E-12
DLBCTFRPS9IRF30.8191011111.12E-12
DLBCTFRPS9MBD30.8268733234.45E-13
DLBCTFRPS9ZNF5810.8337755771.89E-13
DLBCTFRPS9THAP30.8340397961.83E-13
DLBCTFRPS9THAP70.8818262781.27E-16
DLBCTFRPS9NME20.8853264736.61E-17
DLBCTSGRPS9PIN10.8041191385.86E-12
DLBCTSGRPS9TSSC40.8083947443.71E-12
DLBCTSGRPS9PARK70.8140935681.98E-12
DLBCTSGRPS9IRF30.8191011111.12E-12
DLBCTSGRPS9SIRT60.8250773455.53E-13
DLBCTSGRPS9GADD45GIP10.879166242.06E-16
DLBCTSGRPS9GLTSCR20.8800856291.74E-16
DLBCTSGRPS9GNB2L10.9006336182.90E-18
GBMCell metabolism geneRPS9NME20.8003250991.30E-39
GBMCell metabolism geneRPS9GEMIN70.8359548333.66E-46
GBMCell metabolism geneRPS9FAU0.8408620023.45E-47
GBMCell metabolism geneRPS9PFDN50.8603583081.24E-51
GBMCell metabolism geneRPS9SNRPD20.8731362746.26E-55
GBMTFRPS9NME20.8003250991.30E-39
GBMTSGRPS9GADD45GIP10.8085112665.39E-41
HNSCCell metabolism geneRPS9PFDN50.8536739946.32E-162
KIRPCell metabolism geneRPS9SNRPD20.8191171711.80E-79
KIRPCell metabolism geneRPS9FAU0.8706117176.62E-101
KIRPEpifactorRPS9FBL0.802089727.56E-74
KIRPTSGRPS9GLTSCR20.8159744122.17E-78
LAMLCell metabolism geneRPS9FAU0.8174150588.12E-43
LGGCell metabolism geneRPS9FAU0.8323337732.03E-137
LGGEpifactorRPS9FBL0.8174270641.39E-128
LGGTFRPS9ZNF5810.8168197343.06E-128
LGGTSGRPS9GLTSCR20.874985051.85E-168
LIHCCell metabolism geneRPS9PFDN50.8346816284.02E-111
MESOCell metabolism geneRPS9PFDN50.8056297365.02E-21
MESOCell metabolism geneRPS9FAU0.8285489434.04E-23
MESOTSGRPS9GLTSCR20.8715168444.88E-28
PAADCell metabolism geneRPS9FAU0.8218236084.31E-46
PCPGEpifactorRPS9FBL0.8449306233.69E-52
PCPGTSGRPS9GNB2L10.8147461921.16E-45
PCPGTSGRPS9GLTSCR20.8405570993.90E-51
PRADCell metabolism geneRPS9ZNRD10.8002156838.74E-124
PRADCell metabolism geneRPS9PSMB70.8018390581.19E-124
PRADCell metabolism geneRPS9NME20.8021509898.13E-125
PRADCell metabolism geneRPS9PGLS0.8034246231.68E-125
PRADCell metabolism geneRPS9POLR2F0.8035850241.37E-125
PRADCell metabolism geneRPS9TIMM130.8150314935.49E-132
PRADCell metabolism geneRPS9PFDN50.8178557021.24E-133
PRADCell metabolism geneRPS9TOMM70.8192011561.98E-134
PRADCell metabolism geneRPS9POLR2I0.8359840686.15E-145
PRADCell metabolism geneRPS9SNRPD20.8618928599.63E-164
PRADCell metabolism geneRPS9FAU0.8743554733.29E-174
PRADEpifactorRPS9FBL0.8920751843.45E-191
PRADTFRPS9NME20.8021509898.13E-125
PRADTFRPS9ZNF5810.8359163526.81E-145
PRADTFRPS9ZNF5240.8566695911.17E-159
PRADTSGRPS9GNB2L10.8492339454.11E-154
PRADTSGRPS9GLTSCR20.8528469449.08E-157
READCell metabolism geneRPS9PFDN50.8232786074.43E-27
SKCMTSGRPS9GLTSCR20.8488661389.01E-133
THCACell metabolism geneRPS9SNRPD20.810879979.62E-135
THCACell metabolism geneRPS9FAU0.8165030224.25E-138
THYMCell metabolism geneRPS9PTGES20.8001579252.07E-28
THYMCell metabolism geneRPS9MPST0.8010142871.65E-28
THYMCell metabolism geneRPS9TIMM100.8015617121.42E-28
THYMCell metabolism geneRPS9POLE40.8029339559.78E-29
THYMCell metabolism geneRPS9NT5C0.8044098236.53E-29
THYMCell metabolism geneRPS9HMBS0.8103948611.23E-29
THYMCell metabolism geneRPS9LCMT10.8115791178.74E-30
THYMCell metabolism geneRPS9POLD40.8119840597.78E-30
THYMCell metabolism geneRPS9PMPCA0.8158550722.53E-30
THYMCell metabolism geneRPS9SMPD20.8166276542.01E-30
THYMCell metabolism geneRPS9PSMB10.8172265441.69E-30
THYMCell metabolism geneRPS9TOMM220.8173916421.60E-30
THYMCell metabolism geneRPS9GUK10.8191233799.57E-31
THYMCell metabolism geneRPS9POLR2H0.8198630277.66E-31
THYMCell metabolism geneRPS9PSMD130.8211267735.23E-31
THYMCell metabolism geneRPS9IDH3G0.8220370933.96E-31
THYMCell metabolism geneRPS9EXOSC50.822331723.62E-31
THYMCell metabolism geneRPS9FPGS0.8232684882.72E-31
THYMCell metabolism geneRPS9ITPA0.8268799348.83E-32
THYMCell metabolism geneRPS9LSM20.8299923693.28E-32
THYMCell metabolism geneRPS9GMPPA0.83040162.88E-32
THYMCell metabolism geneRPS9PSMB30.8346832287.10E-33
THYMCell metabolism geneRPS9POLD20.8350799716.22E-33
THYMCell metabolism geneRPS9GFER0.8400215671.17E-33
THYMCell metabolism geneRPS9IMPDH20.8433160773.73E-34
THYMCell metabolism geneRPS9APRT0.8440293742.90E-34
THYMCell metabolism geneRPS9ACOT80.8462950551.29E-34
THYMCell metabolism geneRPS9TIMM500.8474139048.64E-35
THYMCell metabolism geneRPS9POLR2I0.8485975745.62E-35
THYMCell metabolism geneRPS9PSMB70.8493895344.21E-35
THYMCell metabolism geneRPS9TALDO10.8495325533.99E-35
THYMCell metabolism geneRPS9POLR2F0.8501651143.16E-35
THYMCell metabolism geneRPS9MVD0.8554939374.25E-36
THYMCell metabolism geneRPS9PSMC30.8558376623.73E-36
THYMCell metabolism geneRPS9EXOSC40.8576337121.86E-36
THYMCell metabolism geneRPS9TIMM8B0.8600581967.15E-37
THYMCell metabolism geneRPS9DPM20.8700023321.17E-38
THYMCell metabolism geneRPS9SSR20.880732349.26E-41
THYMCell metabolism geneRPS9SNRPD20.8917932043.78E-43
THYMCell metabolism geneRPS9TIMM130.8942793211.01E-43
THYMCell metabolism geneRPS9SLC27A50.8970432562.25E-44
THYMCell metabolism geneRPS9PFDN50.8998796634.58E-45
THYMCell metabolism geneRPS9PGLS0.9004488773.31E-45
THYMCell metabolism geneRPS9FAU0.9373067599.00E-57
THYMCGCRPS9MAP2K20.8019986141.26E-28
THYMCGCRPS9MGMT0.8166185112.02E-30
THYMCGCRPS9SDHAF20.8374151072.85E-33
THYMCGCRPS9TFPT0.8500643163.28E-35
THYMCGCRPS9RBM100.8575559261.91E-36
THYMEpifactorRPS9TADA30.806083194.11E-29
THYMEpifactorRPS9LAS1L0.8062098293.97E-29
THYMEpifactorRPS9PPP4C0.8129534045.89E-30
THYMEpifactorRPS9RRP80.8142933173.99E-30
THYMEpifactorRPS9RUVBL20.8164053242.15E-30
THYMEpifactorRPS9PRMT10.8166098972.02E-30
THYMEpifactorRPS9CCDC1010.8212601485.02E-31
THYMEpifactorRPS9EXOSC50.822331723.62E-31
THYMEpifactorRPS9ZNHIT10.8308312292.50E-32
THYMEpifactorRPS9DMAP10.8359072444.72E-33
THYMEpifactorRPS9TFPT0.8500643163.28E-35
THYMEpifactorRPS9SIRT60.8519158581.65E-35
THYMEpifactorRPS9EXOSC40.8576337121.86E-36
THYMEpifactorRPS9NOC2L0.8598017767.91E-37
THYMEpifactorRPS9MBD30.8609829334.94E-37
THYMEpifactorRPS9C17orf490.8663742055.44E-38
THYMEpifactorRPS9BRMS10.8692064371.64E-38
THYMEpifactorRPS9TAF100.8696973651.33E-38
THYMEpifactorRPS9PRPF310.8713244216.59E-39
THYMEpifactorRPS9FBL0.9303151324.15E-54
THYMIUPHARRPS9PTGES20.8001579252.07E-28
THYMIUPHARRPS9MPST0.8010142871.65E-28
THYMIUPHARRPS9MAP2K20.8019986141.26E-28
THYMIUPHARRPS9NT5C0.8044098236.53E-29
THYMIUPHARRPS9PRMT10.8166098972.02E-30
THYMIUPHARRPS9SMPD20.8166276542.01E-30
THYMIUPHARRPS9PSMB10.8172265441.69E-30
THYMIUPHARRPS9IMPDH20.8433160773.73E-34
THYMIUPHARRPS9EGLN20.8483835456.08E-35
THYMIUPHARRPS9SIRT60.8519158581.65E-35
THYMIUPHARRPS9MVD0.8554939374.25E-36
THYMIUPHARRPS9SLC27A50.8970432562.25E-44
THYMKinaseRPS9MAP2K20.8019986141.26E-28
THYMTFRPS9ZNF6880.803355838.72E-29
THYMTFRPS9CENPB0.8041713866.97E-29
THYMTFRPS9ZNF4080.8218871874.15E-31
THYMTFRPS9THAP70.8325782011.42E-32
THYMTFRPS9ZNF5240.8351768716.02E-33
THYMTFRPS9REXO40.8371260793.14E-33
THYMTFRPS9ZNF7870.8444070552.54E-34
THYMTFRPS9ZNF4280.8483700426.11E-35
THYMTFRPS9MBD30.8609829334.94E-37
THYMTFRPS9THAP30.8622901052.92E-37
THYMTFRPS9ZNF5810.8789756712.11E-40
THYMTSGRPS9NPRL20.8117867748.23E-30
THYMTSGRPS9PARK70.8182075991.26E-30
THYMTSGRPS9GABARAP0.8218409844.21E-31
THYMTSGRPS9SIRT60.8519158581.65E-35
THYMTSGRPS9GADD45GIP10.8538232728.05E-36
THYMTSGRPS9BRMS10.8692064371.64E-38
THYMTSGRPS9GNB2L10.8934608621.57E-43
THYMTSGRPS9GLTSCR20.8987071878.90E-45
THYMTSGRPS9TSSC40.9051953592.04E-46
UCECTFRPS9ZNF5810.8036922029.58E-47
UCSCell metabolism geneRPS9PTGES20.8001579252.07E-28
UCSCell metabolism geneRPS9MPST0.8010142871.65E-28
UCSCell metabolism geneRPS9TIMM100.8015617121.42E-28
UCSCell metabolism geneRPS9POLE40.8029339559.78E-29
UCSCell metabolism geneRPS9NT5C0.8044098236.53E-29
UCSCell metabolism geneRPS9HMBS0.8103948611.23E-29
UCSCell metabolism geneRPS9LCMT10.8115791178.74E-30
UCSCell metabolism geneRPS9POLD40.8119840597.78E-30
UCSCell metabolism geneRPS9PMPCA0.8158550722.53E-30
UCSCell metabolism geneRPS9SMPD20.8166276542.01E-30
UCSCell metabolism geneRPS9PSMB10.8172265441.69E-30
UCSCell metabolism geneRPS9TOMM220.8173916421.60E-30
UCSCell metabolism geneRPS9GUK10.8191233799.57E-31
UCSCell metabolism geneRPS9POLR2H0.8198630277.66E-31
UCSCell metabolism geneRPS9PSMD130.8211267735.23E-31
UCSCell metabolism geneRPS9IDH3G0.8220370933.96E-31
UCSCell metabolism geneRPS9EXOSC50.822331723.62E-31
UCSCell metabolism geneRPS9FPGS0.8232684882.72E-31
UCSCell metabolism geneRPS9ITPA0.8268799348.83E-32
UCSCell metabolism geneRPS9LSM20.8299923693.28E-32
UCSCell metabolism geneRPS9GMPPA0.83040162.88E-32
UCSCell metabolism geneRPS9PSMB30.8346832287.10E-33
UCSCell metabolism geneRPS9POLD20.8350799716.22E-33
UCSCell metabolism geneRPS9GFER0.8400215671.17E-33
UCSCell metabolism geneRPS9IMPDH20.8433160773.73E-34
UCSCell metabolism geneRPS9APRT0.8440293742.90E-34
UCSCell metabolism geneRPS9ACOT80.8462950551.29E-34
UCSCell metabolism geneRPS9TIMM500.8474139048.64E-35
UCSCell metabolism geneRPS9POLR2I0.8485975745.62E-35
UCSCell metabolism geneRPS9PSMB70.8493895344.21E-35
UCSCell metabolism geneRPS9TALDO10.8495325533.99E-35
UCSCell metabolism geneRPS9POLR2F0.8501651143.16E-35
UCSCell metabolism geneRPS9MVD0.8554939374.25E-36
UCSCell metabolism geneRPS9PSMC30.8558376623.73E-36
UCSCell metabolism geneRPS9EXOSC40.8576337121.86E-36
UCSCell metabolism geneRPS9TIMM8B0.8600581967.15E-37
UCSCell metabolism geneRPS9DPM20.8700023321.17E-38
UCSCell metabolism geneRPS9SSR20.880732349.26E-41
UCSCell metabolism geneRPS9SNRPD20.8917932043.78E-43
UCSCell metabolism geneRPS9TIMM130.8942793211.01E-43
UCSCell metabolism geneRPS9SLC27A50.8970432562.25E-44
UCSCell metabolism geneRPS9PFDN50.8998796634.58E-45
UCSCell metabolism geneRPS9PGLS0.9004488773.31E-45
UCSCell metabolism geneRPS9FAU0.9373067599.00E-57
UCSCGCRPS9MAP2K20.8019986141.26E-28
UCSCGCRPS9MGMT0.8166185112.02E-30
UCSCGCRPS9SDHAF20.8374151072.85E-33
UCSCGCRPS9TFPT0.8500643163.28E-35
UCSCGCRPS9RBM100.8575559261.91E-36
UCSEpifactorRPS9TADA30.806083194.11E-29
UCSEpifactorRPS9LAS1L0.8062098293.97E-29
UCSEpifactorRPS9PPP4C0.8129534045.89E-30
UCSEpifactorRPS9RRP80.8142933173.99E-30
UCSEpifactorRPS9RUVBL20.8164053242.15E-30
UCSEpifactorRPS9PRMT10.8166098972.02E-30
UCSEpifactorRPS9CCDC1010.8212601485.02E-31
UCSEpifactorRPS9EXOSC50.822331723.62E-31
UCSEpifactorRPS9ZNHIT10.8308312292.50E-32
UCSEpifactorRPS9DMAP10.8359072444.72E-33
UCSEpifactorRPS9TFPT0.8500643163.28E-35
UCSEpifactorRPS9SIRT60.8519158581.65E-35
UCSEpifactorRPS9EXOSC40.8576337121.86E-36
UCSEpifactorRPS9NOC2L0.8598017767.91E-37
UCSEpifactorRPS9MBD30.8609829334.94E-37
UCSEpifactorRPS9C17orf490.8663742055.44E-38
UCSEpifactorRPS9BRMS10.8692064371.64E-38
UCSEpifactorRPS9TAF100.8696973651.33E-38
UCSEpifactorRPS9PRPF310.8713244216.59E-39
UCSEpifactorRPS9FBL0.9303151324.15E-54
UCSIUPHARRPS9PTGES20.8001579252.07E-28
UCSIUPHARRPS9MPST0.8010142871.65E-28
UCSIUPHARRPS9MAP2K20.8019986141.26E-28
UCSIUPHARRPS9NT5C0.8044098236.53E-29
UCSIUPHARRPS9PRMT10.8166098972.02E-30
UCSIUPHARRPS9SMPD20.8166276542.01E-30
UCSIUPHARRPS9PSMB10.8172265441.69E-30
UCSIUPHARRPS9IMPDH20.8433160773.73E-34
UCSIUPHARRPS9EGLN20.8483835456.08E-35
UCSIUPHARRPS9SIRT60.8519158581.65E-35
UCSIUPHARRPS9MVD0.8554939374.25E-36
UCSIUPHARRPS9SLC27A50.8970432562.25E-44
UCSKinaseRPS9MAP2K20.8019986141.26E-28
UCSTFRPS9ZNF6880.803355838.72E-29
UCSTFRPS9CENPB0.8041713866.97E-29
UCSTFRPS9ZNF4080.8218871874.15E-31
UCSTFRPS9THAP70.8325782011.42E-32
UCSTFRPS9ZNF5240.8351768716.02E-33
UCSTFRPS9REXO40.8371260793.14E-33
UCSTFRPS9ZNF7870.8444070552.54E-34
UCSTFRPS9ZNF4280.8483700426.11E-35
UCSTFRPS9MBD30.8609829334.94E-37
UCSTFRPS9THAP30.8622901052.92E-37
UCSTFRPS9ZNF5810.8789756712.11E-40
UCSTSGRPS9NPRL20.8117867748.23E-30
UCSTSGRPS9PARK70.8182075991.26E-30
UCSTSGRPS9GABARAP0.8218409844.21E-31
UCSTSGRPS9SIRT60.8519158581.65E-35
UCSTSGRPS9GADD45GIP10.8538232728.05E-36
UCSTSGRPS9BRMS10.8692064371.64E-38
UCSTSGRPS9GNB2L10.8934608621.57E-43
UCSTSGRPS9GLTSCR20.8987071878.90E-45
UCSTSGRPS9TSSC40.9051953592.04E-46
UVMCell metabolism geneRPS9MPST0.8054814962.10E-19
UVMCell metabolism geneRPS9LCMT10.8069795891.60E-19
UVMCell metabolism geneRPS9SAT20.8126868815.58E-20
UVMCell metabolism geneRPS9IMPDH20.8385175412.88E-22
UVMCell metabolism geneRPS9SSR20.8440993938.18E-23
UVMCell metabolism geneRPS9FAU0.8945942675.20E-29
UVMCGCRPS9TRAF70.8342946967.25E-22
UVMEpifactorRPS9TRIM280.8219294119.35E-21
UVMEpifactorRPS9FBL0.9281142883.28E-35
UVMIUPHARRPS9MPST0.8054814962.10E-19
UVMIUPHARRPS9TRIM280.8219294119.35E-21
UVMIUPHARRPS9IMPDH20.8385175412.88E-22
UVMKinaseRPS9TRIM280.8219294119.35E-21
UVMTFRPS9REXO40.8228612547.77E-21
UVMTFRPS9ZNF5810.9108289791.05E-31
UVMTSGRPS9GLTSCR20.895469543.82E-29
UVMTSGRPS9GNB2L10.9012111344.72E-30


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Protein structure


check button Protein 3D structure
Visit iCn3D.


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Protein-Protein Interaction


check button Protein-protein interaction networks
* Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure

check buttonOverlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure
check button
* Edge colors based on TCGA cancer types.

check button* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P))
all structure
Cancer typeTranslation factorInteracting protein coding geneFCadj.pval
KIRPRPS9RPL18A-1.516513928088850.00016188295558095
KICHRPS9RPS27A1.753966937859560.000187873840332031
KIRPRPS9RPS16-1.359570436175170.00019507110118866
COADRPS9RPS31.487303751430140.000411599874496461
KIRPRPS9RPS11-1.018615705651030.00105937570333481
LIHCRPS9RPL8-4.845882849745580.00110314154326131
PRADRPS9RPL18A1.406001757484990.00205137828390396
KICHRPS9RPL191.369011828940890.00250792503356934
KICHRPS9RPS121.269973817584310.00308787822723389
LUADRPS9RPL19-1.313980266157250.00993159558412698
THCARPS9RPS16-6.163227981565770.0115764821363307
BLCARPS9RPS12-1.478046734404210.0204124450683594
BLCARPS9RPS27A-1.047474700691880.0258216857910156
HNSCRPS9RPS3-4.735058190951350.0273726439852453
COADRPS9RPS111.353075489982040.0312207043170929
LUSCRPS9RPL19-2.146698895166660.044366810398747
KIRCRPS9RPL19-2.734852712766761.33980982873695e-10
BRCARPS9RPS12-4.912393274782441.85340619742495e-09
KIRPRPS9RPL37-1.174216219471392.26888805627823e-05
KIRCRPS9RPL35-1.064752380593922.72286325678163e-08
KIRCRPS9RPL8-1.182524599717735.64962994208288e-07
KIRPRPS9RPL8-1.530036923501196.0301274061203e-05
KIRCRPS9RPS16-1.661498698893847.8509870430991e-09
BRCARPS9RPS27A-4.285121482004247.8788217967112e-14
KIRCRPS9RPL37-2.871988220584648.03913394748564e-12
KIRPRPS9RPL35-1.529811019754969.0546440333128e-05
KIRCRPS9RPS3-1.295608479263879.05905681935088e-10
KIRCRPS9RPL18A-4.430793049608439.2516163152192e-11


check button Protein-protein interactors with this translation factor (BIOGRID-3.4.160)
PPI interactors with RPS9
DDX56, LYAR, EIF1B, MAGEB2, DSTYK, VHL, MEPCE, CHAF1A, ESR1, AGO4, CD4, NOP56, EBNA-LP, NDRG1, CUL3, CUL5, CUL2, CDK2, CUL1, COPS5, CAND1, RPS4X, APP, RPL10A, RPL7A, RPS3, RPL4, RPL6, RPL21, RPS3A, RPL12, RPL30, RPL8, RPL27, RPS17, RPS6, RPS23, RPS16, RPS2, RPS7, RPS8, RPL18, RPSA, RPL11, RPL19, RPS24, RPL5, RPS19, RPS13, RPS14, RPS28, RPS25, RPL23A, RPS29, FAU, RPL37, CCNT1, PRPF40A, MAGOH, EIF4A3, SMURF1, VCP, FN1, VCAM1, UBL4A, ITGA4, PAN2, CD81, IGSF8, ICAM1, STAT3, FBXO6, TARDBP, LARP1, PNO1, RPS10, RPS12, RPS15A, RPS20, RPS21, RPS26, RPS27, RPS5, DDX3X, EIF3A, EIF3D, EIF3E, EIF3L, EIF3H, GNB2L1, RPS11, RPS15, RPS18, SND1, WIBG, TSR1, RPA1, RPA2, RPA3, ZBTB1, Fbxl16, STAU1, CDKN1A, CEP250, CEP76, NEDD1, TP53, TUBG1, TUBGCP3, HUWE1, FUS, CUL7, OBSL1, NTRK1, RNPS1, RPL13A, RPL14, RPL15, RPL17, RPL27A, RPL32, RPL35, RPL35A, RPL37A, RPL38, RPL7, RPLP2, LOC101929876, ATP1B3, BCLAF1, PABPC4, POLR2C, RPL10, RPL13, RPL18A, RPL22, RPL23, RPL24, RPL26, RPL26L1, RPL3, RPL31, RPL34, RPL36, RPL39, RPL3L, RPL9, RPLP0, SFN, PTEN, XPO1, HNRNPU, NPM1, IBTK, Rpl35, Srp72, Rrbp1, Ormdl1, GAN, MCM2, Ksr1, Mdm2, SEC61B, ZNF746, RRS1, H2AFX, EBNA1BP2, NCL, CYLD, TRIM25, UBE2A, BRCA1, MTF1, ZNF598, IQGAP1, TMPO, BMP4, PCBP1, PPIE, ACO2, GSK3A, KRAS, UBE2L6, UBE2M, PRPF8, EFTUD2, AAR2, PIH1D1, CHD3, CHD4, SPDL1, RIOK1, HEXIM1, LARP7, RNF123, HERC2, SNAI1, AGR2, RECQL4, RNF144A, REST, MYC, CDK9, Prkaa1, Prkab1, FBL, HIST1H3A, METTL14, KIAA1429, EIF4B, ACTC1, PHB, USP14, NR2C2, UBQLN2, PPP1CC, CTCF, ATXN3, VRK1, SNRNP70, Dppa3, ITFG1, ARAF, HMGB1, BIRC3, NFX1, WWP2, MATR3, Dnajc17, CMTR1, PLEKHA4, PINK1, YAP1, TFCP2, FANCD2, HCVgp1, ZC3H18, FKBP1A, DHX29, EXOC8, NKX2-6, SNIP1, ANKRD55, E, M, nsp13, nsp14, nsp4, nsp5, nsp6, ORF3a, ORF6, ORF7a, ORF7b, NEK4, DUX4, CIT, ANLN, AURKB, CHMP4B, CHMP4C, ECT2, KIF14, KIF20A, KIF23, PRC1, INS, NDN, BRD4, CIC, N, Apc2, RBM39, FBP1, MKRN1, LGALS9, RIN3, AR, PARK2, UFL1, DDRGK1, CD3EAP, LCK, MARCKS, NUP155, PANX1, PEX3, REEP5, ATG10, ATG3, USP15, FZR1, UBC, PAGE4, NUDCD2, NAA40, PRDM15, NGDN, MRPS15, CMSS1, MRPS28, DNTTIP2, TOE1, MRPS24, ZC3H8, MTERF3, RSL1D1, DDX50, GNL2, YBX1, MRPL21, VPRBP, SNRPA1, ZBTB24, PURG, GLYR1, SRSF5, FTSJ3, KNOP1, YBX2, CCDC137, CCDC140, MRPL41, MRPL17, MRPL24, MRPS18B, KRI1, MRPL52, MRPL30, BRIX1, SRSF6, DAP3, RRP12, MRPS35, DDX18, RRP8, MRPS31, MRPS33, CSNK2A2, MRPS9, RRP15, MRPS7, MRPS30, MRPS5, GLTSCR2, NPM3, HP1BP3, ZNF770, MRPL51, MRPS23, MRPS2, RBM34, DKC1, ZBTB48, MRPL49, KMT2A, ZFP62, SRSF12, RBM19, DDX54, WHSC1, MRPS10, MRPS26, MRPS18C, ZNF638, DHX57, MRPS22, ZCCHC3, NOM1, PRKRA, DDX21, GADD45GIP1, CTNNBL1, MRPS34, MRPL27, MPHOSPH10, ZBTB11, MRS2, LIN28B, CSNK2A1, MRPL2, RPL7L1, ECD, C1QBP, PRR3, ZNF48, MRPS25, CNBP, ZSCAN25, NOP16, MRPS21, ZNF384, ZNF512, KRR1, MRPL13, PTCD3, PRDM10, ZNF668, HIST1H1B, DDX27, HIST1H1E, HIST1H1A, RPSAP58, ZNF346, SPRTN, BTF3, FBXW7, UBR5, RCHY1, CCNF, HECTD1, RB1CC1, ZEB1,


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Mutations


check button Clinically associated variants from ClinVar.
GeneChrPositionRefSeqVarSeqRefSeeqVarTypePathogenicDiseaseVarInfo


check button nsSNVs with sample frequency (size of circle) from TCGA 33 cancers.
all structure


check button SNVs and Indels
GeneCancer typeChromosomeStartEndRefSeeqMutSeqMutation typeAAchange# samples
RPS9UVMchr195470541854705418GAMissense_Mutation3
RPS9ESCAchr195471142654711426GTMissense_Mutationp.D190Y3
RPS9ESCAchr195471142654711426GTMissense_Mutation2
RPS9BLCAchr195470508154705081GCMissense_Mutationp.R10P2
RPS9STADchr195471019054710190GTMissense_Mutationp.E89D2
RPS9STADchr195471141054711410GTSilentp.G184G2
RPS9KIRCchr195471027554710275GTMissense_Mutationp.G118C2
RPS9CESCchr195471030554710305GAMissense_Mutation2
RPS9UCECchr195471042654710426GAMissense_Mutationp.R138Q2
RPS9LIHCchr195470541654705416C-Frame_Shift_Delp.I53fs2
RPS9LIHCchr195471136554711365C-Frame_Shift_Delp.R169fs2
RPS9SKCMchr195471025054710250CTSilentp.R109R2
RPS9STADchr195471022654710226GASilentp.K101K2
RPS9LUADchr195471135654711356GTSilentp.G166G1
RPS9GBMchr195470539454705394TCMissense_Mutation1
RPS9LUSCchr195471142854711428CTSilentp.D190D1
RPS9BLCAchr195471042554710425CTMissense_Mutationp.R138W1
RPS9GBMchr195471029854710298CTSilent1
RPS9OVchr195940311559403115GAMissense_Mutationp.V149I1
RPS9BLCAchr195471133754711337CTMissense_Mutationp.S160F1
RPS9STADchr195471019354710193CTSilent1
RPS9PRADchr195471036554710365ACMissense_Mutationp.T148P1
RPS9CESCchr195471132954711329CTSilent1
RPS9THYMchr195471017154710171GAMissense_Mutation1
RPS9LIHCchr195470511154705111TCMissense_Mutation1
RPS9PRADchr195471032154710321GCMissense_Mutationp.R133P1
RPS9THYMchr195471017154710171GAMissense_Mutationp.R83H1
RPS9LIHCchr195470541654705416C-Frame_Shift_Del1
RPS9PRADchr195471032254710322CTSilentp.R133R1
RPS9CESCchr195470500854705008CGMissense_Mutation1
RPS9SARCchr195470545454705454AGMissense_Mutation1
RPS9CESCchr195471142154711421GCMissense_Mutation1
RPS9COADchr195471139854711398GTMissense_Mutationp.K180N1
RPS9LIHCchr195471037054710370C-Frame_Shift_Delp.C149fs1
RPS9SKCMchr195470540354705403CTMissense_Mutationp.T49I1
RPS9COADchr195471015854710158CTMissense_Mutationp.R79W1
RPS9LIHCchr195470508354705083A-Frame_Shift_Delp.K11fs1
RPS9ACCchr195470540854705408GTMissense_Mutationp.A51S1
RPS9SKCMchr195470510354705103GASilentp.R17R1
RPS9LIHCchr195471129754711297T-Frame_Shift_Delp.F147fs1
RPS9BLCAchr195470508154705081GCMissense_Mutation1

check buttonCopy number variation (CNV) of RPS9
* Click on the image to open the original image in a new window.
all structure

check buttonFusion gene breakpoints (product of the structural variants (SVs)) across RPS9
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


check button Fusion genes with this translation factor from FusionGDB2.0.
FusionGDB2 IDDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
95429STADTCGA-BR-8284-01AARF5chr7127229648+RPS9chr1954711266+
95429STADTCGA-VQ-A928CNOT3chr1954641709+RPS9chr1954705027+
95429OVTCGA-31-1956COL6A3chr2238305369-RPS9chr1954710143+
95429STADTCGA-CD-8531FADS3chr1161644337-RPS9chr1954711265+
95429N/AAX397221FLRT2chr1486078400-RPS9chr1954711515-
95429N/AAA531389NUP155chr537335260-RPS9chr1954711515-
95429OVTCGA-24-1850-01APLD3chr1940854631+RPS9chr1954735617+
95429OVTCGA-24-1850-01APLD3chr1940854675+RPS9chr1954735617+
95429COADTCGA-A6-2679-01APYROXD1chr1221590946+RPS9chr1954705034+
78184N/ABI858487RPS9chr1954711512+ADAMTS9chr364664203-
101248N/ABQ924718RPS9chr1954711515+BAIAP2L1chr798016023-
78184LAMLTCGA-AB-2894RPS9chr1954705477+CDC45chr2219468475+
97030OVTCGA-29-1777RPS9chr1954705149+CLTAchr936197547+
101694N/AAW771764RPS9chr1954711406-COMMD5chr8146067596-
91571N/AAA533482RPS9chr1954711512+DHRS7Bchr1721039824+
101590READTCGA-AG-3878RPS9chr1954711350+EEF1Dchr8144679593-
102278COADTCGA-AZ-4308-01ARPS9chr1954705058+HNRNPUL1chr1941782087+
99572HNSCTCGA-F7-A50GRPS9chr1954711294+KRT17chr1739780378-
93822Non-CancerERR315395RPS9chr1954705149+MYADMchr1954376782+
82531N/AAW410007RPS9chr1954705054+P4HBchr1779804852-
98891COADTCGA-AA-3529-01ARPS9chr1954705152+PDE6Achr5149246799-
78184N/ABU590293RPS9chr1954711372+PSMD4chr1151239761+
90875N/ADB097076RPS9chr1954705457+SCAF8chr6155143480+
78184BRCATCGA-D8-A1XQ-01ARPS9chr1954705477+TSEN34chr1954697030+
95429N/ACD743028SRMchr111116695+RPS9chr1954705463-
95431N/ABQ063558TUFMchr1628857291-RPS9chr1954705436+


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Prognostic Analysis


check button Kaplan-Meier plots with logrank tests of overall survival (OS)
all structure
Cancer typeTranslation factorCoefficentHazard ratioWald test pvalLikelihool ratio pvalLogrank test pval# samples


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Translation factor and Gender


check button Differential gene expression between female and male. (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
KIRCRPS90.0001621912901616840.0045
SARCRPS90.01048572535149130.28
LGGRPS90.04712993293425341

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Translation factor and Age


check button Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
LUSCRPS90.0154755952024520.51
PAADRPS90.02352424901701220.75

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Related Drugs


check button Drugs targeting genes involved in this translation factor.
(DrugBank Version 5.1.8 2021-05-08)
UniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases


check button Diseases associated with this translation factor.
(DisGeNet 4.0)
Disease IDDisease Name# PubMedsDisease source