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Translation Factor: RPS9 (NCBI Gene ID:6203) |
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Gene Summary |
Gene Information | Gene Name: RPS9 | Gene ID: 6203 | Gene Symbol | RPS9 | Gene ID | 6203 |
Gene Name | ribosomal protein S9 | |
Synonyms | S9 | |
Cytomap | 19q13.42 | |
Type of Gene | protein-coding | |
Description | 40S ribosomal protein S9small ribosomal subunit protein uS4 | |
Modification date | 20200313 | |
UniProtAcc | P46781 |
Child GO biological process term(s) under GO:0006412 |
GO ID | GO term |
GO:0006417 | Regulation of translation |
GO:0005840 | Ribosome |
GO:0045727 | Positive regulation of translation |
GO:0002181 | Cytoplasmic translation |
GO:0006412 | Translation |
Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Inferred gene age of translation factor. |
Gene | Inferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25 |
RPS9 | >1119.25 |
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We searched PubMed using 'RPS9[title] AND translation [title] AND human.' |
Gene | Title | PMID |
RPS9 | . | . |
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Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. For more annotations, please visit our ExonSkipDB. |
Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ENST | Exon skip start (DNA) | Exon Skip end (DNA) | ORF |
Exon skipping position in the amino acid sequence. |
ENST | Exon skip start (DNA) | Exon Skip end (DNA) | Len(transcript seq) | Exon skip start (mRNA) | Exon Skip end (mRNA) | Len(amino acid seq) | Exon skip start (AA) | Exon Skip end (AA) |
Potentially (partially) lost protein functional features of UniProt. |
UniProtAcc | Exon skip start (AA) | Exon Skip end (AA) | Function feature start (AA) | Function feature end (AA) | Functional feature type | Functional feature desc. |
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Gene expression level across TCGA pancancer |
Gene expression level across GTEx pantissue |
Expression level of gene isoforms across TCGA pancancer |
Expression level of gene isoforms across GTEx pantissue |
Cancer(tissue) type-specific expression level of Translation factor using z-score distriution |
Differential expression between tumor and matched normal (in the cancer types with more than 10 matched samples) |
Cancer type | Translation factor | FC | adj.pval |
COAD | RPS9 | 1.18612014402235 | 0.0381683111190796 |
BRCA | RPS9 | 1.9331477546349 | 2.31299392089389e-07 |
KIRC | RPS9 | -1.32680816440987 | 6.53264115309597e-07 |
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Translation factor expression regulation through miRNA binding |
Cancer type | Gene | miRNA | TargetScan binding score (Context++ score percentile) | Coefficient | Pvalue |
DLBC | RPS9 | hsa-miR-218-5p | 80 | 0.315564292321924 | 0.0311713710863107 |
UVM | RPS9 | hsa-miR-218-5p | 80 | 0.318597857838364 | 0.00437572418638372 |
Translation factor expression regulation through methylation in the promoter of Translation factor |
Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
LIHC | RPS9 | 1 | 2 | 0.0232016891487689 | 0.165402991452991 | 0.279364516129032 | -0.246360376659846 | 0.250435156838695 |
Translation factor expression regulation through methylation in the gene body of Translation factor (positive regulation) |
Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
Translation factor expression regulation through copy number variation of Translation factor |
Cancer type | Gene | Coefficient | Pvalue |
KIRC | RPS9 | -0.070916648 | 0.00196807 |
THYM | RPS9 | 0.080435423 | 0.036976411 |
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Strongly correlated genes belong to cellular important gene groups with RPS9 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green) |
Cancer type | Gene group | Translation factor | Correlated gene | Coefficient | Pvalue |
BRCA | Cell metabolism gene | RPS9 | FAU | 0.813524709 | 1.48E-288 |
BRCA | TSG | RPS9 | GLTSCR2 | 0.839031692 | 1e-323 |
CHOL | Cell metabolism gene | RPS9 | TOMM7 | 0.814891662 | 9.59E-12 |
CHOL | Cell metabolism gene | RPS9 | PFDN5 | 0.856456671 | 6.29E-14 |
CHOL | TSG | RPS9 | GLTSCR2 | 0.88809041 | 4.14E-16 |
DLBC | Cell metabolism gene | RPS9 | TOMM7 | 0.800502999 | 8.56E-12 |
DLBC | Cell metabolism gene | RPS9 | LSM4 | 0.802453871 | 6.98E-12 |
DLBC | Cell metabolism gene | RPS9 | MIF | 0.807392616 | 4.13E-12 |
DLBC | Cell metabolism gene | RPS9 | PSMB6 | 0.811087487 | 2.76E-12 |
DLBC | Cell metabolism gene | RPS9 | PHPT1 | 0.81279725 | 2.29E-12 |
DLBC | Cell metabolism gene | RPS9 | PTDSS2 | 0.814094387 | 1.98E-12 |
DLBC | Cell metabolism gene | RPS9 | POLR2I | 0.816765974 | 1.46E-12 |
DLBC | Cell metabolism gene | RPS9 | LSM2 | 0.824374682 | 6.01E-13 |
DLBC | Cell metabolism gene | RPS9 | PSMC5 | 0.827667463 | 4.04E-13 |
DLBC | Cell metabolism gene | RPS9 | PSMD13 | 0.828248961 | 3.76E-13 |
DLBC | Cell metabolism gene | RPS9 | POLR2F | 0.837046322 | 1.24E-13 |
DLBC | Cell metabolism gene | RPS9 | TOMM22 | 0.841552354 | 6.86E-14 |
DLBC | Cell metabolism gene | RPS9 | ECHS1 | 0.844069126 | 4.88E-14 |
DLBC | Cell metabolism gene | RPS9 | PGLS | 0.84634834 | 3.57E-14 |
DLBC | Cell metabolism gene | RPS9 | PSMB3 | 0.855524275 | 9.61E-15 |
DLBC | Cell metabolism gene | RPS9 | TIMM9 | 0.86209663 | 3.55E-15 |
DLBC | Cell metabolism gene | RPS9 | GEMIN7 | 0.865088646 | 2.21E-15 |
DLBC | Cell metabolism gene | RPS9 | TIMM13 | 0.871111119 | 8.29E-16 |
DLBC | Cell metabolism gene | RPS9 | GFER | 0.879590411 | 1.91E-16 |
DLBC | Cell metabolism gene | RPS9 | NME2 | 0.885326473 | 6.61E-17 |
DLBC | Cell metabolism gene | RPS9 | PFDN5 | 0.887974511 | 3.98E-17 |
DLBC | Cell metabolism gene | RPS9 | FAU | 0.898564461 | 4.56E-18 |
DLBC | Cell metabolism gene | RPS9 | SNRPD2 | 0.910774516 | 2.73E-19 |
DLBC | CGC | RPS9 | MAP2K2 | 0.809410635 | 3.32E-12 |
DLBC | CGC | RPS9 | NACA | 0.824765214 | 5.74E-13 |
DLBC | CGC | RPS9 | NTHL1 | 0.837247485 | 1.21E-13 |
DLBC | Epifactor | RPS9 | ANP32B | 0.808021638 | 3.86E-12 |
DLBC | Epifactor | RPS9 | PAF1 | 0.808937508 | 3.49E-12 |
DLBC | Epifactor | RPS9 | RBX1 | 0.821039797 | 8.92E-13 |
DLBC | Epifactor | RPS9 | PRPF31 | 0.823088424 | 7.01E-13 |
DLBC | Epifactor | RPS9 | SIRT6 | 0.825077345 | 5.53E-13 |
DLBC | Epifactor | RPS9 | MBD3 | 0.826873323 | 4.45E-13 |
DLBC | Epifactor | RPS9 | ZNHIT1 | 0.827882334 | 3.94E-13 |
DLBC | Epifactor | RPS9 | DMAP1 | 0.832641938 | 2.18E-13 |
DLBC | Epifactor | RPS9 | FBL | 0.877600391 | 2.72E-16 |
DLBC | IUPHAR | RPS9 | SLC25A3 | 0.80771861 | 3.99E-12 |
DLBC | IUPHAR | RPS9 | MAP2K2 | 0.809410635 | 3.32E-12 |
DLBC | IUPHAR | RPS9 | PSMB6 | 0.811087487 | 2.76E-12 |
DLBC | IUPHAR | RPS9 | SIRT6 | 0.825077345 | 5.53E-13 |
DLBC | IUPHAR | RPS9 | SLC25A26 | 0.834178629 | 1.79E-13 |
DLBC | Kinase | RPS9 | MAP2K2 | 0.809410635 | 3.32E-12 |
DLBC | TF | RPS9 | PIN1 | 0.804119138 | 5.86E-12 |
DLBC | TF | RPS9 | ZNF444 | 0.813811905 | 2.04E-12 |
DLBC | TF | RPS9 | ZNF428 | 0.819075746 | 1.12E-12 |
DLBC | TF | RPS9 | IRF3 | 0.819101111 | 1.12E-12 |
DLBC | TF | RPS9 | MBD3 | 0.826873323 | 4.45E-13 |
DLBC | TF | RPS9 | ZNF581 | 0.833775577 | 1.89E-13 |
DLBC | TF | RPS9 | THAP3 | 0.834039796 | 1.83E-13 |
DLBC | TF | RPS9 | THAP7 | 0.881826278 | 1.27E-16 |
DLBC | TF | RPS9 | NME2 | 0.885326473 | 6.61E-17 |
DLBC | TSG | RPS9 | PIN1 | 0.804119138 | 5.86E-12 |
DLBC | TSG | RPS9 | TSSC4 | 0.808394744 | 3.71E-12 |
DLBC | TSG | RPS9 | PARK7 | 0.814093568 | 1.98E-12 |
DLBC | TSG | RPS9 | IRF3 | 0.819101111 | 1.12E-12 |
DLBC | TSG | RPS9 | SIRT6 | 0.825077345 | 5.53E-13 |
DLBC | TSG | RPS9 | GADD45GIP1 | 0.87916624 | 2.06E-16 |
DLBC | TSG | RPS9 | GLTSCR2 | 0.880085629 | 1.74E-16 |
DLBC | TSG | RPS9 | GNB2L1 | 0.900633618 | 2.90E-18 |
GBM | Cell metabolism gene | RPS9 | NME2 | 0.800325099 | 1.30E-39 |
GBM | Cell metabolism gene | RPS9 | GEMIN7 | 0.835954833 | 3.66E-46 |
GBM | Cell metabolism gene | RPS9 | FAU | 0.840862002 | 3.45E-47 |
GBM | Cell metabolism gene | RPS9 | PFDN5 | 0.860358308 | 1.24E-51 |
GBM | Cell metabolism gene | RPS9 | SNRPD2 | 0.873136274 | 6.26E-55 |
GBM | TF | RPS9 | NME2 | 0.800325099 | 1.30E-39 |
GBM | TSG | RPS9 | GADD45GIP1 | 0.808511266 | 5.39E-41 |
HNSC | Cell metabolism gene | RPS9 | PFDN5 | 0.853673994 | 6.32E-162 |
KIRP | Cell metabolism gene | RPS9 | SNRPD2 | 0.819117171 | 1.80E-79 |
KIRP | Cell metabolism gene | RPS9 | FAU | 0.870611717 | 6.62E-101 |
KIRP | Epifactor | RPS9 | FBL | 0.80208972 | 7.56E-74 |
KIRP | TSG | RPS9 | GLTSCR2 | 0.815974412 | 2.17E-78 |
LAML | Cell metabolism gene | RPS9 | FAU | 0.817415058 | 8.12E-43 |
LGG | Cell metabolism gene | RPS9 | FAU | 0.832333773 | 2.03E-137 |
LGG | Epifactor | RPS9 | FBL | 0.817427064 | 1.39E-128 |
LGG | TF | RPS9 | ZNF581 | 0.816819734 | 3.06E-128 |
LGG | TSG | RPS9 | GLTSCR2 | 0.87498505 | 1.85E-168 |
LIHC | Cell metabolism gene | RPS9 | PFDN5 | 0.834681628 | 4.02E-111 |
MESO | Cell metabolism gene | RPS9 | PFDN5 | 0.805629736 | 5.02E-21 |
MESO | Cell metabolism gene | RPS9 | FAU | 0.828548943 | 4.04E-23 |
MESO | TSG | RPS9 | GLTSCR2 | 0.871516844 | 4.88E-28 |
PAAD | Cell metabolism gene | RPS9 | FAU | 0.821823608 | 4.31E-46 |
PCPG | Epifactor | RPS9 | FBL | 0.844930623 | 3.69E-52 |
PCPG | TSG | RPS9 | GNB2L1 | 0.814746192 | 1.16E-45 |
PCPG | TSG | RPS9 | GLTSCR2 | 0.840557099 | 3.90E-51 |
PRAD | Cell metabolism gene | RPS9 | ZNRD1 | 0.800215683 | 8.74E-124 |
PRAD | Cell metabolism gene | RPS9 | PSMB7 | 0.801839058 | 1.19E-124 |
PRAD | Cell metabolism gene | RPS9 | NME2 | 0.802150989 | 8.13E-125 |
PRAD | Cell metabolism gene | RPS9 | PGLS | 0.803424623 | 1.68E-125 |
PRAD | Cell metabolism gene | RPS9 | POLR2F | 0.803585024 | 1.37E-125 |
PRAD | Cell metabolism gene | RPS9 | TIMM13 | 0.815031493 | 5.49E-132 |
PRAD | Cell metabolism gene | RPS9 | PFDN5 | 0.817855702 | 1.24E-133 |
PRAD | Cell metabolism gene | RPS9 | TOMM7 | 0.819201156 | 1.98E-134 |
PRAD | Cell metabolism gene | RPS9 | POLR2I | 0.835984068 | 6.15E-145 |
PRAD | Cell metabolism gene | RPS9 | SNRPD2 | 0.861892859 | 9.63E-164 |
PRAD | Cell metabolism gene | RPS9 | FAU | 0.874355473 | 3.29E-174 |
PRAD | Epifactor | RPS9 | FBL | 0.892075184 | 3.45E-191 |
PRAD | TF | RPS9 | NME2 | 0.802150989 | 8.13E-125 |
PRAD | TF | RPS9 | ZNF581 | 0.835916352 | 6.81E-145 |
PRAD | TF | RPS9 | ZNF524 | 0.856669591 | 1.17E-159 |
PRAD | TSG | RPS9 | GNB2L1 | 0.849233945 | 4.11E-154 |
PRAD | TSG | RPS9 | GLTSCR2 | 0.852846944 | 9.08E-157 |
READ | Cell metabolism gene | RPS9 | PFDN5 | 0.823278607 | 4.43E-27 |
SKCM | TSG | RPS9 | GLTSCR2 | 0.848866138 | 9.01E-133 |
THCA | Cell metabolism gene | RPS9 | SNRPD2 | 0.81087997 | 9.62E-135 |
THCA | Cell metabolism gene | RPS9 | FAU | 0.816503022 | 4.25E-138 |
THYM | Cell metabolism gene | RPS9 | PTGES2 | 0.800157925 | 2.07E-28 |
THYM | Cell metabolism gene | RPS9 | MPST | 0.801014287 | 1.65E-28 |
THYM | Cell metabolism gene | RPS9 | TIMM10 | 0.801561712 | 1.42E-28 |
THYM | Cell metabolism gene | RPS9 | POLE4 | 0.802933955 | 9.78E-29 |
THYM | Cell metabolism gene | RPS9 | NT5C | 0.804409823 | 6.53E-29 |
THYM | Cell metabolism gene | RPS9 | HMBS | 0.810394861 | 1.23E-29 |
THYM | Cell metabolism gene | RPS9 | LCMT1 | 0.811579117 | 8.74E-30 |
THYM | Cell metabolism gene | RPS9 | POLD4 | 0.811984059 | 7.78E-30 |
THYM | Cell metabolism gene | RPS9 | PMPCA | 0.815855072 | 2.53E-30 |
THYM | Cell metabolism gene | RPS9 | SMPD2 | 0.816627654 | 2.01E-30 |
THYM | Cell metabolism gene | RPS9 | PSMB1 | 0.817226544 | 1.69E-30 |
THYM | Cell metabolism gene | RPS9 | TOMM22 | 0.817391642 | 1.60E-30 |
THYM | Cell metabolism gene | RPS9 | GUK1 | 0.819123379 | 9.57E-31 |
THYM | Cell metabolism gene | RPS9 | POLR2H | 0.819863027 | 7.66E-31 |
THYM | Cell metabolism gene | RPS9 | PSMD13 | 0.821126773 | 5.23E-31 |
THYM | Cell metabolism gene | RPS9 | IDH3G | 0.822037093 | 3.96E-31 |
THYM | Cell metabolism gene | RPS9 | EXOSC5 | 0.82233172 | 3.62E-31 |
THYM | Cell metabolism gene | RPS9 | FPGS | 0.823268488 | 2.72E-31 |
THYM | Cell metabolism gene | RPS9 | ITPA | 0.826879934 | 8.83E-32 |
THYM | Cell metabolism gene | RPS9 | LSM2 | 0.829992369 | 3.28E-32 |
THYM | Cell metabolism gene | RPS9 | GMPPA | 0.8304016 | 2.88E-32 |
THYM | Cell metabolism gene | RPS9 | PSMB3 | 0.834683228 | 7.10E-33 |
THYM | Cell metabolism gene | RPS9 | POLD2 | 0.835079971 | 6.22E-33 |
THYM | Cell metabolism gene | RPS9 | GFER | 0.840021567 | 1.17E-33 |
THYM | Cell metabolism gene | RPS9 | IMPDH2 | 0.843316077 | 3.73E-34 |
THYM | Cell metabolism gene | RPS9 | APRT | 0.844029374 | 2.90E-34 |
THYM | Cell metabolism gene | RPS9 | ACOT8 | 0.846295055 | 1.29E-34 |
THYM | Cell metabolism gene | RPS9 | TIMM50 | 0.847413904 | 8.64E-35 |
THYM | Cell metabolism gene | RPS9 | POLR2I | 0.848597574 | 5.62E-35 |
THYM | Cell metabolism gene | RPS9 | PSMB7 | 0.849389534 | 4.21E-35 |
THYM | Cell metabolism gene | RPS9 | TALDO1 | 0.849532553 | 3.99E-35 |
THYM | Cell metabolism gene | RPS9 | POLR2F | 0.850165114 | 3.16E-35 |
THYM | Cell metabolism gene | RPS9 | MVD | 0.855493937 | 4.25E-36 |
THYM | Cell metabolism gene | RPS9 | PSMC3 | 0.855837662 | 3.73E-36 |
THYM | Cell metabolism gene | RPS9 | EXOSC4 | 0.857633712 | 1.86E-36 |
THYM | Cell metabolism gene | RPS9 | TIMM8B | 0.860058196 | 7.15E-37 |
THYM | Cell metabolism gene | RPS9 | DPM2 | 0.870002332 | 1.17E-38 |
THYM | Cell metabolism gene | RPS9 | SSR2 | 0.88073234 | 9.26E-41 |
THYM | Cell metabolism gene | RPS9 | SNRPD2 | 0.891793204 | 3.78E-43 |
THYM | Cell metabolism gene | RPS9 | TIMM13 | 0.894279321 | 1.01E-43 |
THYM | Cell metabolism gene | RPS9 | SLC27A5 | 0.897043256 | 2.25E-44 |
THYM | Cell metabolism gene | RPS9 | PFDN5 | 0.899879663 | 4.58E-45 |
THYM | Cell metabolism gene | RPS9 | PGLS | 0.900448877 | 3.31E-45 |
THYM | Cell metabolism gene | RPS9 | FAU | 0.937306759 | 9.00E-57 |
THYM | CGC | RPS9 | MAP2K2 | 0.801998614 | 1.26E-28 |
THYM | CGC | RPS9 | MGMT | 0.816618511 | 2.02E-30 |
THYM | CGC | RPS9 | SDHAF2 | 0.837415107 | 2.85E-33 |
THYM | CGC | RPS9 | TFPT | 0.850064316 | 3.28E-35 |
THYM | CGC | RPS9 | RBM10 | 0.857555926 | 1.91E-36 |
THYM | Epifactor | RPS9 | TADA3 | 0.80608319 | 4.11E-29 |
THYM | Epifactor | RPS9 | LAS1L | 0.806209829 | 3.97E-29 |
THYM | Epifactor | RPS9 | PPP4C | 0.812953404 | 5.89E-30 |
THYM | Epifactor | RPS9 | RRP8 | 0.814293317 | 3.99E-30 |
THYM | Epifactor | RPS9 | RUVBL2 | 0.816405324 | 2.15E-30 |
THYM | Epifactor | RPS9 | PRMT1 | 0.816609897 | 2.02E-30 |
THYM | Epifactor | RPS9 | CCDC101 | 0.821260148 | 5.02E-31 |
THYM | Epifactor | RPS9 | EXOSC5 | 0.82233172 | 3.62E-31 |
THYM | Epifactor | RPS9 | ZNHIT1 | 0.830831229 | 2.50E-32 |
THYM | Epifactor | RPS9 | DMAP1 | 0.835907244 | 4.72E-33 |
THYM | Epifactor | RPS9 | TFPT | 0.850064316 | 3.28E-35 |
THYM | Epifactor | RPS9 | SIRT6 | 0.851915858 | 1.65E-35 |
THYM | Epifactor | RPS9 | EXOSC4 | 0.857633712 | 1.86E-36 |
THYM | Epifactor | RPS9 | NOC2L | 0.859801776 | 7.91E-37 |
THYM | Epifactor | RPS9 | MBD3 | 0.860982933 | 4.94E-37 |
THYM | Epifactor | RPS9 | C17orf49 | 0.866374205 | 5.44E-38 |
THYM | Epifactor | RPS9 | BRMS1 | 0.869206437 | 1.64E-38 |
THYM | Epifactor | RPS9 | TAF10 | 0.869697365 | 1.33E-38 |
THYM | Epifactor | RPS9 | PRPF31 | 0.871324421 | 6.59E-39 |
THYM | Epifactor | RPS9 | FBL | 0.930315132 | 4.15E-54 |
THYM | IUPHAR | RPS9 | PTGES2 | 0.800157925 | 2.07E-28 |
THYM | IUPHAR | RPS9 | MPST | 0.801014287 | 1.65E-28 |
THYM | IUPHAR | RPS9 | MAP2K2 | 0.801998614 | 1.26E-28 |
THYM | IUPHAR | RPS9 | NT5C | 0.804409823 | 6.53E-29 |
THYM | IUPHAR | RPS9 | PRMT1 | 0.816609897 | 2.02E-30 |
THYM | IUPHAR | RPS9 | SMPD2 | 0.816627654 | 2.01E-30 |
THYM | IUPHAR | RPS9 | PSMB1 | 0.817226544 | 1.69E-30 |
THYM | IUPHAR | RPS9 | IMPDH2 | 0.843316077 | 3.73E-34 |
THYM | IUPHAR | RPS9 | EGLN2 | 0.848383545 | 6.08E-35 |
THYM | IUPHAR | RPS9 | SIRT6 | 0.851915858 | 1.65E-35 |
THYM | IUPHAR | RPS9 | MVD | 0.855493937 | 4.25E-36 |
THYM | IUPHAR | RPS9 | SLC27A5 | 0.897043256 | 2.25E-44 |
THYM | Kinase | RPS9 | MAP2K2 | 0.801998614 | 1.26E-28 |
THYM | TF | RPS9 | ZNF688 | 0.80335583 | 8.72E-29 |
THYM | TF | RPS9 | CENPB | 0.804171386 | 6.97E-29 |
THYM | TF | RPS9 | ZNF408 | 0.821887187 | 4.15E-31 |
THYM | TF | RPS9 | THAP7 | 0.832578201 | 1.42E-32 |
THYM | TF | RPS9 | ZNF524 | 0.835176871 | 6.02E-33 |
THYM | TF | RPS9 | REXO4 | 0.837126079 | 3.14E-33 |
THYM | TF | RPS9 | ZNF787 | 0.844407055 | 2.54E-34 |
THYM | TF | RPS9 | ZNF428 | 0.848370042 | 6.11E-35 |
THYM | TF | RPS9 | MBD3 | 0.860982933 | 4.94E-37 |
THYM | TF | RPS9 | THAP3 | 0.862290105 | 2.92E-37 |
THYM | TF | RPS9 | ZNF581 | 0.878975671 | 2.11E-40 |
THYM | TSG | RPS9 | NPRL2 | 0.811786774 | 8.23E-30 |
THYM | TSG | RPS9 | PARK7 | 0.818207599 | 1.26E-30 |
THYM | TSG | RPS9 | GABARAP | 0.821840984 | 4.21E-31 |
THYM | TSG | RPS9 | SIRT6 | 0.851915858 | 1.65E-35 |
THYM | TSG | RPS9 | GADD45GIP1 | 0.853823272 | 8.05E-36 |
THYM | TSG | RPS9 | BRMS1 | 0.869206437 | 1.64E-38 |
THYM | TSG | RPS9 | GNB2L1 | 0.893460862 | 1.57E-43 |
THYM | TSG | RPS9 | GLTSCR2 | 0.898707187 | 8.90E-45 |
THYM | TSG | RPS9 | TSSC4 | 0.905195359 | 2.04E-46 |
UCEC | TF | RPS9 | ZNF581 | 0.803692202 | 9.58E-47 |
UCS | Cell metabolism gene | RPS9 | PTGES2 | 0.800157925 | 2.07E-28 |
UCS | Cell metabolism gene | RPS9 | MPST | 0.801014287 | 1.65E-28 |
UCS | Cell metabolism gene | RPS9 | TIMM10 | 0.801561712 | 1.42E-28 |
UCS | Cell metabolism gene | RPS9 | POLE4 | 0.802933955 | 9.78E-29 |
UCS | Cell metabolism gene | RPS9 | NT5C | 0.804409823 | 6.53E-29 |
UCS | Cell metabolism gene | RPS9 | HMBS | 0.810394861 | 1.23E-29 |
UCS | Cell metabolism gene | RPS9 | LCMT1 | 0.811579117 | 8.74E-30 |
UCS | Cell metabolism gene | RPS9 | POLD4 | 0.811984059 | 7.78E-30 |
UCS | Cell metabolism gene | RPS9 | PMPCA | 0.815855072 | 2.53E-30 |
UCS | Cell metabolism gene | RPS9 | SMPD2 | 0.816627654 | 2.01E-30 |
UCS | Cell metabolism gene | RPS9 | PSMB1 | 0.817226544 | 1.69E-30 |
UCS | Cell metabolism gene | RPS9 | TOMM22 | 0.817391642 | 1.60E-30 |
UCS | Cell metabolism gene | RPS9 | GUK1 | 0.819123379 | 9.57E-31 |
UCS | Cell metabolism gene | RPS9 | POLR2H | 0.819863027 | 7.66E-31 |
UCS | Cell metabolism gene | RPS9 | PSMD13 | 0.821126773 | 5.23E-31 |
UCS | Cell metabolism gene | RPS9 | IDH3G | 0.822037093 | 3.96E-31 |
UCS | Cell metabolism gene | RPS9 | EXOSC5 | 0.82233172 | 3.62E-31 |
UCS | Cell metabolism gene | RPS9 | FPGS | 0.823268488 | 2.72E-31 |
UCS | Cell metabolism gene | RPS9 | ITPA | 0.826879934 | 8.83E-32 |
UCS | Cell metabolism gene | RPS9 | LSM2 | 0.829992369 | 3.28E-32 |
UCS | Cell metabolism gene | RPS9 | GMPPA | 0.8304016 | 2.88E-32 |
UCS | Cell metabolism gene | RPS9 | PSMB3 | 0.834683228 | 7.10E-33 |
UCS | Cell metabolism gene | RPS9 | POLD2 | 0.835079971 | 6.22E-33 |
UCS | Cell metabolism gene | RPS9 | GFER | 0.840021567 | 1.17E-33 |
UCS | Cell metabolism gene | RPS9 | IMPDH2 | 0.843316077 | 3.73E-34 |
UCS | Cell metabolism gene | RPS9 | APRT | 0.844029374 | 2.90E-34 |
UCS | Cell metabolism gene | RPS9 | ACOT8 | 0.846295055 | 1.29E-34 |
UCS | Cell metabolism gene | RPS9 | TIMM50 | 0.847413904 | 8.64E-35 |
UCS | Cell metabolism gene | RPS9 | POLR2I | 0.848597574 | 5.62E-35 |
UCS | Cell metabolism gene | RPS9 | PSMB7 | 0.849389534 | 4.21E-35 |
UCS | Cell metabolism gene | RPS9 | TALDO1 | 0.849532553 | 3.99E-35 |
UCS | Cell metabolism gene | RPS9 | POLR2F | 0.850165114 | 3.16E-35 |
UCS | Cell metabolism gene | RPS9 | MVD | 0.855493937 | 4.25E-36 |
UCS | Cell metabolism gene | RPS9 | PSMC3 | 0.855837662 | 3.73E-36 |
UCS | Cell metabolism gene | RPS9 | EXOSC4 | 0.857633712 | 1.86E-36 |
UCS | Cell metabolism gene | RPS9 | TIMM8B | 0.860058196 | 7.15E-37 |
UCS | Cell metabolism gene | RPS9 | DPM2 | 0.870002332 | 1.17E-38 |
UCS | Cell metabolism gene | RPS9 | SSR2 | 0.88073234 | 9.26E-41 |
UCS | Cell metabolism gene | RPS9 | SNRPD2 | 0.891793204 | 3.78E-43 |
UCS | Cell metabolism gene | RPS9 | TIMM13 | 0.894279321 | 1.01E-43 |
UCS | Cell metabolism gene | RPS9 | SLC27A5 | 0.897043256 | 2.25E-44 |
UCS | Cell metabolism gene | RPS9 | PFDN5 | 0.899879663 | 4.58E-45 |
UCS | Cell metabolism gene | RPS9 | PGLS | 0.900448877 | 3.31E-45 |
UCS | Cell metabolism gene | RPS9 | FAU | 0.937306759 | 9.00E-57 |
UCS | CGC | RPS9 | MAP2K2 | 0.801998614 | 1.26E-28 |
UCS | CGC | RPS9 | MGMT | 0.816618511 | 2.02E-30 |
UCS | CGC | RPS9 | SDHAF2 | 0.837415107 | 2.85E-33 |
UCS | CGC | RPS9 | TFPT | 0.850064316 | 3.28E-35 |
UCS | CGC | RPS9 | RBM10 | 0.857555926 | 1.91E-36 |
UCS | Epifactor | RPS9 | TADA3 | 0.80608319 | 4.11E-29 |
UCS | Epifactor | RPS9 | LAS1L | 0.806209829 | 3.97E-29 |
UCS | Epifactor | RPS9 | PPP4C | 0.812953404 | 5.89E-30 |
UCS | Epifactor | RPS9 | RRP8 | 0.814293317 | 3.99E-30 |
UCS | Epifactor | RPS9 | RUVBL2 | 0.816405324 | 2.15E-30 |
UCS | Epifactor | RPS9 | PRMT1 | 0.816609897 | 2.02E-30 |
UCS | Epifactor | RPS9 | CCDC101 | 0.821260148 | 5.02E-31 |
UCS | Epifactor | RPS9 | EXOSC5 | 0.82233172 | 3.62E-31 |
UCS | Epifactor | RPS9 | ZNHIT1 | 0.830831229 | 2.50E-32 |
UCS | Epifactor | RPS9 | DMAP1 | 0.835907244 | 4.72E-33 |
UCS | Epifactor | RPS9 | TFPT | 0.850064316 | 3.28E-35 |
UCS | Epifactor | RPS9 | SIRT6 | 0.851915858 | 1.65E-35 |
UCS | Epifactor | RPS9 | EXOSC4 | 0.857633712 | 1.86E-36 |
UCS | Epifactor | RPS9 | NOC2L | 0.859801776 | 7.91E-37 |
UCS | Epifactor | RPS9 | MBD3 | 0.860982933 | 4.94E-37 |
UCS | Epifactor | RPS9 | C17orf49 | 0.866374205 | 5.44E-38 |
UCS | Epifactor | RPS9 | BRMS1 | 0.869206437 | 1.64E-38 |
UCS | Epifactor | RPS9 | TAF10 | 0.869697365 | 1.33E-38 |
UCS | Epifactor | RPS9 | PRPF31 | 0.871324421 | 6.59E-39 |
UCS | Epifactor | RPS9 | FBL | 0.930315132 | 4.15E-54 |
UCS | IUPHAR | RPS9 | PTGES2 | 0.800157925 | 2.07E-28 |
UCS | IUPHAR | RPS9 | MPST | 0.801014287 | 1.65E-28 |
UCS | IUPHAR | RPS9 | MAP2K2 | 0.801998614 | 1.26E-28 |
UCS | IUPHAR | RPS9 | NT5C | 0.804409823 | 6.53E-29 |
UCS | IUPHAR | RPS9 | PRMT1 | 0.816609897 | 2.02E-30 |
UCS | IUPHAR | RPS9 | SMPD2 | 0.816627654 | 2.01E-30 |
UCS | IUPHAR | RPS9 | PSMB1 | 0.817226544 | 1.69E-30 |
UCS | IUPHAR | RPS9 | IMPDH2 | 0.843316077 | 3.73E-34 |
UCS | IUPHAR | RPS9 | EGLN2 | 0.848383545 | 6.08E-35 |
UCS | IUPHAR | RPS9 | SIRT6 | 0.851915858 | 1.65E-35 |
UCS | IUPHAR | RPS9 | MVD | 0.855493937 | 4.25E-36 |
UCS | IUPHAR | RPS9 | SLC27A5 | 0.897043256 | 2.25E-44 |
UCS | Kinase | RPS9 | MAP2K2 | 0.801998614 | 1.26E-28 |
UCS | TF | RPS9 | ZNF688 | 0.80335583 | 8.72E-29 |
UCS | TF | RPS9 | CENPB | 0.804171386 | 6.97E-29 |
UCS | TF | RPS9 | ZNF408 | 0.821887187 | 4.15E-31 |
UCS | TF | RPS9 | THAP7 | 0.832578201 | 1.42E-32 |
UCS | TF | RPS9 | ZNF524 | 0.835176871 | 6.02E-33 |
UCS | TF | RPS9 | REXO4 | 0.837126079 | 3.14E-33 |
UCS | TF | RPS9 | ZNF787 | 0.844407055 | 2.54E-34 |
UCS | TF | RPS9 | ZNF428 | 0.848370042 | 6.11E-35 |
UCS | TF | RPS9 | MBD3 | 0.860982933 | 4.94E-37 |
UCS | TF | RPS9 | THAP3 | 0.862290105 | 2.92E-37 |
UCS | TF | RPS9 | ZNF581 | 0.878975671 | 2.11E-40 |
UCS | TSG | RPS9 | NPRL2 | 0.811786774 | 8.23E-30 |
UCS | TSG | RPS9 | PARK7 | 0.818207599 | 1.26E-30 |
UCS | TSG | RPS9 | GABARAP | 0.821840984 | 4.21E-31 |
UCS | TSG | RPS9 | SIRT6 | 0.851915858 | 1.65E-35 |
UCS | TSG | RPS9 | GADD45GIP1 | 0.853823272 | 8.05E-36 |
UCS | TSG | RPS9 | BRMS1 | 0.869206437 | 1.64E-38 |
UCS | TSG | RPS9 | GNB2L1 | 0.893460862 | 1.57E-43 |
UCS | TSG | RPS9 | GLTSCR2 | 0.898707187 | 8.90E-45 |
UCS | TSG | RPS9 | TSSC4 | 0.905195359 | 2.04E-46 |
UVM | Cell metabolism gene | RPS9 | MPST | 0.805481496 | 2.10E-19 |
UVM | Cell metabolism gene | RPS9 | LCMT1 | 0.806979589 | 1.60E-19 |
UVM | Cell metabolism gene | RPS9 | SAT2 | 0.812686881 | 5.58E-20 |
UVM | Cell metabolism gene | RPS9 | IMPDH2 | 0.838517541 | 2.88E-22 |
UVM | Cell metabolism gene | RPS9 | SSR2 | 0.844099393 | 8.18E-23 |
UVM | Cell metabolism gene | RPS9 | FAU | 0.894594267 | 5.20E-29 |
UVM | CGC | RPS9 | TRAF7 | 0.834294696 | 7.25E-22 |
UVM | Epifactor | RPS9 | TRIM28 | 0.821929411 | 9.35E-21 |
UVM | Epifactor | RPS9 | FBL | 0.928114288 | 3.28E-35 |
UVM | IUPHAR | RPS9 | MPST | 0.805481496 | 2.10E-19 |
UVM | IUPHAR | RPS9 | TRIM28 | 0.821929411 | 9.35E-21 |
UVM | IUPHAR | RPS9 | IMPDH2 | 0.838517541 | 2.88E-22 |
UVM | Kinase | RPS9 | TRIM28 | 0.821929411 | 9.35E-21 |
UVM | TF | RPS9 | REXO4 | 0.822861254 | 7.77E-21 |
UVM | TF | RPS9 | ZNF581 | 0.910828979 | 1.05E-31 |
UVM | TSG | RPS9 | GLTSCR2 | 0.89546954 | 3.82E-29 |
UVM | TSG | RPS9 | GNB2L1 | 0.901211134 | 4.72E-30 |
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Protein 3D structure Visit iCn3D. |
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Protein-protein interaction networks * Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
Overlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
* Edge colors based on TCGA cancer types. |
* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P)) |
Cancer type | Translation factor | Interacting protein coding gene | FC | adj.pval |
KIRP | RPS9 | RPL18A | -1.51651392808885 | 0.00016188295558095 |
KICH | RPS9 | RPS27A | 1.75396693785956 | 0.000187873840332031 |
KIRP | RPS9 | RPS16 | -1.35957043617517 | 0.00019507110118866 |
COAD | RPS9 | RPS3 | 1.48730375143014 | 0.000411599874496461 |
KIRP | RPS9 | RPS11 | -1.01861570565103 | 0.00105937570333481 |
LIHC | RPS9 | RPL8 | -4.84588284974558 | 0.00110314154326131 |
PRAD | RPS9 | RPL18A | 1.40600175748499 | 0.00205137828390396 |
KICH | RPS9 | RPL19 | 1.36901182894089 | 0.00250792503356934 |
KICH | RPS9 | RPS12 | 1.26997381758431 | 0.00308787822723389 |
LUAD | RPS9 | RPL19 | -1.31398026615725 | 0.00993159558412698 |
THCA | RPS9 | RPS16 | -6.16322798156577 | 0.0115764821363307 |
BLCA | RPS9 | RPS12 | -1.47804673440421 | 0.0204124450683594 |
BLCA | RPS9 | RPS27A | -1.04747470069188 | 0.0258216857910156 |
HNSC | RPS9 | RPS3 | -4.73505819095135 | 0.0273726439852453 |
COAD | RPS9 | RPS11 | 1.35307548998204 | 0.0312207043170929 |
LUSC | RPS9 | RPL19 | -2.14669889516666 | 0.044366810398747 |
KIRC | RPS9 | RPL19 | -2.73485271276676 | 1.33980982873695e-10 |
BRCA | RPS9 | RPS12 | -4.91239327478244 | 1.85340619742495e-09 |
KIRP | RPS9 | RPL37 | -1.17421621947139 | 2.26888805627823e-05 |
KIRC | RPS9 | RPL35 | -1.06475238059392 | 2.72286325678163e-08 |
KIRC | RPS9 | RPL8 | -1.18252459971773 | 5.64962994208288e-07 |
KIRP | RPS9 | RPL8 | -1.53003692350119 | 6.0301274061203e-05 |
KIRC | RPS9 | RPS16 | -1.66149869889384 | 7.8509870430991e-09 |
BRCA | RPS9 | RPS27A | -4.28512148200424 | 7.8788217967112e-14 |
KIRC | RPS9 | RPL37 | -2.87198822058464 | 8.03913394748564e-12 |
KIRP | RPS9 | RPL35 | -1.52981101975496 | 9.0546440333128e-05 |
KIRC | RPS9 | RPS3 | -1.29560847926387 | 9.05905681935088e-10 |
KIRC | RPS9 | RPL18A | -4.43079304960843 | 9.2516163152192e-11 |
Protein-protein interactors with this translation factor (BIOGRID-3.4.160) |
PPI interactors with RPS9 |
DDX56, LYAR, EIF1B, MAGEB2, DSTYK, VHL, MEPCE, CHAF1A, ESR1, AGO4, CD4, NOP56, EBNA-LP, NDRG1, CUL3, CUL5, CUL2, CDK2, CUL1, COPS5, CAND1, RPS4X, APP, RPL10A, RPL7A, RPS3, RPL4, RPL6, RPL21, RPS3A, RPL12, RPL30, RPL8, RPL27, RPS17, RPS6, RPS23, RPS16, RPS2, RPS7, RPS8, RPL18, RPSA, RPL11, RPL19, RPS24, RPL5, RPS19, RPS13, RPS14, RPS28, RPS25, RPL23A, RPS29, FAU, RPL37, CCNT1, PRPF40A, MAGOH, EIF4A3, SMURF1, VCP, FN1, VCAM1, UBL4A, ITGA4, PAN2, CD81, IGSF8, ICAM1, STAT3, FBXO6, TARDBP, LARP1, PNO1, RPS10, RPS12, RPS15A, RPS20, RPS21, RPS26, RPS27, RPS5, DDX3X, EIF3A, EIF3D, EIF3E, EIF3L, EIF3H, GNB2L1, RPS11, RPS15, RPS18, SND1, WIBG, TSR1, RPA1, RPA2, RPA3, ZBTB1, Fbxl16, STAU1, CDKN1A, CEP250, CEP76, NEDD1, TP53, TUBG1, TUBGCP3, HUWE1, FUS, CUL7, OBSL1, NTRK1, RNPS1, RPL13A, RPL14, RPL15, RPL17, RPL27A, RPL32, RPL35, RPL35A, RPL37A, RPL38, RPL7, RPLP2, LOC101929876, ATP1B3, BCLAF1, PABPC4, POLR2C, RPL10, RPL13, RPL18A, RPL22, RPL23, RPL24, RPL26, RPL26L1, RPL3, RPL31, RPL34, RPL36, RPL39, RPL3L, RPL9, RPLP0, SFN, PTEN, XPO1, HNRNPU, NPM1, IBTK, Rpl35, Srp72, Rrbp1, Ormdl1, GAN, MCM2, Ksr1, Mdm2, SEC61B, ZNF746, RRS1, H2AFX, EBNA1BP2, NCL, CYLD, TRIM25, UBE2A, BRCA1, MTF1, ZNF598, IQGAP1, TMPO, BMP4, PCBP1, PPIE, ACO2, GSK3A, KRAS, UBE2L6, UBE2M, PRPF8, EFTUD2, AAR2, PIH1D1, CHD3, CHD4, SPDL1, RIOK1, HEXIM1, LARP7, RNF123, HERC2, SNAI1, AGR2, RECQL4, RNF144A, REST, MYC, CDK9, Prkaa1, Prkab1, FBL, HIST1H3A, METTL14, KIAA1429, EIF4B, ACTC1, PHB, USP14, NR2C2, UBQLN2, PPP1CC, CTCF, ATXN3, VRK1, SNRNP70, Dppa3, ITFG1, ARAF, HMGB1, BIRC3, NFX1, WWP2, MATR3, Dnajc17, CMTR1, PLEKHA4, PINK1, YAP1, TFCP2, FANCD2, HCVgp1, ZC3H18, FKBP1A, DHX29, EXOC8, NKX2-6, SNIP1, ANKRD55, E, M, nsp13, nsp14, nsp4, nsp5, nsp6, ORF3a, ORF6, ORF7a, ORF7b, NEK4, DUX4, CIT, ANLN, AURKB, CHMP4B, CHMP4C, ECT2, KIF14, KIF20A, KIF23, PRC1, INS, NDN, BRD4, CIC, N, Apc2, RBM39, FBP1, MKRN1, LGALS9, RIN3, AR, PARK2, UFL1, DDRGK1, CD3EAP, LCK, MARCKS, NUP155, PANX1, PEX3, REEP5, ATG10, ATG3, USP15, FZR1, UBC, PAGE4, NUDCD2, NAA40, PRDM15, NGDN, MRPS15, CMSS1, MRPS28, DNTTIP2, TOE1, MRPS24, ZC3H8, MTERF3, RSL1D1, DDX50, GNL2, YBX1, MRPL21, VPRBP, SNRPA1, ZBTB24, PURG, GLYR1, SRSF5, FTSJ3, KNOP1, YBX2, CCDC137, CCDC140, MRPL41, MRPL17, MRPL24, MRPS18B, KRI1, MRPL52, MRPL30, BRIX1, SRSF6, DAP3, RRP12, MRPS35, DDX18, RRP8, MRPS31, MRPS33, CSNK2A2, MRPS9, RRP15, MRPS7, MRPS30, MRPS5, GLTSCR2, NPM3, HP1BP3, ZNF770, MRPL51, MRPS23, MRPS2, RBM34, DKC1, ZBTB48, MRPL49, KMT2A, ZFP62, SRSF12, RBM19, DDX54, WHSC1, MRPS10, MRPS26, MRPS18C, ZNF638, DHX57, MRPS22, ZCCHC3, NOM1, PRKRA, DDX21, GADD45GIP1, CTNNBL1, MRPS34, MRPL27, MPHOSPH10, ZBTB11, MRS2, LIN28B, CSNK2A1, MRPL2, RPL7L1, ECD, C1QBP, PRR3, ZNF48, MRPS25, CNBP, ZSCAN25, NOP16, MRPS21, ZNF384, ZNF512, KRR1, MRPL13, PTCD3, PRDM10, ZNF668, HIST1H1B, DDX27, HIST1H1E, HIST1H1A, RPSAP58, ZNF346, SPRTN, BTF3, FBXW7, UBR5, RCHY1, CCNF, HECTD1, RB1CC1, ZEB1, |
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Clinically associated variants from ClinVar. |
Gene | Chr | Position | RefSeq | VarSeq | RefSeeq | VarType | Pathogenic | Disease | VarInfo |
nsSNVs with sample frequency (size of circle) from TCGA 33 cancers. |
SNVs and Indels |
Gene | Cancer type | Chromosome | Start | End | RefSeeq | MutSeq | Mutation type | AAchange | # samples |
RPS9 | UVM | chr19 | 54705418 | 54705418 | G | A | Missense_Mutation | 3 | |
RPS9 | ESCA | chr19 | 54711426 | 54711426 | G | T | Missense_Mutation | p.D190Y | 3 |
RPS9 | ESCA | chr19 | 54711426 | 54711426 | G | T | Missense_Mutation | 2 | |
RPS9 | BLCA | chr19 | 54705081 | 54705081 | G | C | Missense_Mutation | p.R10P | 2 |
RPS9 | STAD | chr19 | 54710190 | 54710190 | G | T | Missense_Mutation | p.E89D | 2 |
RPS9 | STAD | chr19 | 54711410 | 54711410 | G | T | Silent | p.G184G | 2 |
RPS9 | KIRC | chr19 | 54710275 | 54710275 | G | T | Missense_Mutation | p.G118C | 2 |
RPS9 | CESC | chr19 | 54710305 | 54710305 | G | A | Missense_Mutation | 2 | |
RPS9 | UCEC | chr19 | 54710426 | 54710426 | G | A | Missense_Mutation | p.R138Q | 2 |
RPS9 | LIHC | chr19 | 54705416 | 54705416 | C | - | Frame_Shift_Del | p.I53fs | 2 |
RPS9 | LIHC | chr19 | 54711365 | 54711365 | C | - | Frame_Shift_Del | p.R169fs | 2 |
RPS9 | SKCM | chr19 | 54710250 | 54710250 | C | T | Silent | p.R109R | 2 |
RPS9 | STAD | chr19 | 54710226 | 54710226 | G | A | Silent | p.K101K | 2 |
RPS9 | LUAD | chr19 | 54711356 | 54711356 | G | T | Silent | p.G166G | 1 |
RPS9 | GBM | chr19 | 54705394 | 54705394 | T | C | Missense_Mutation | 1 | |
RPS9 | LUSC | chr19 | 54711428 | 54711428 | C | T | Silent | p.D190D | 1 |
RPS9 | BLCA | chr19 | 54710425 | 54710425 | C | T | Missense_Mutation | p.R138W | 1 |
RPS9 | GBM | chr19 | 54710298 | 54710298 | C | T | Silent | 1 | |
RPS9 | OV | chr19 | 59403115 | 59403115 | G | A | Missense_Mutation | p.V149I | 1 |
RPS9 | BLCA | chr19 | 54711337 | 54711337 | C | T | Missense_Mutation | p.S160F | 1 |
RPS9 | STAD | chr19 | 54710193 | 54710193 | C | T | Silent | 1 | |
RPS9 | PRAD | chr19 | 54710365 | 54710365 | A | C | Missense_Mutation | p.T148P | 1 |
RPS9 | CESC | chr19 | 54711329 | 54711329 | C | T | Silent | 1 | |
RPS9 | THYM | chr19 | 54710171 | 54710171 | G | A | Missense_Mutation | 1 | |
RPS9 | LIHC | chr19 | 54705111 | 54705111 | T | C | Missense_Mutation | 1 | |
RPS9 | PRAD | chr19 | 54710321 | 54710321 | G | C | Missense_Mutation | p.R133P | 1 |
RPS9 | THYM | chr19 | 54710171 | 54710171 | G | A | Missense_Mutation | p.R83H | 1 |
RPS9 | LIHC | chr19 | 54705416 | 54705416 | C | - | Frame_Shift_Del | 1 | |
RPS9 | PRAD | chr19 | 54710322 | 54710322 | C | T | Silent | p.R133R | 1 |
RPS9 | CESC | chr19 | 54705008 | 54705008 | C | G | Missense_Mutation | 1 | |
RPS9 | SARC | chr19 | 54705454 | 54705454 | A | G | Missense_Mutation | 1 | |
RPS9 | CESC | chr19 | 54711421 | 54711421 | G | C | Missense_Mutation | 1 | |
RPS9 | COAD | chr19 | 54711398 | 54711398 | G | T | Missense_Mutation | p.K180N | 1 |
RPS9 | LIHC | chr19 | 54710370 | 54710370 | C | - | Frame_Shift_Del | p.C149fs | 1 |
RPS9 | SKCM | chr19 | 54705403 | 54705403 | C | T | Missense_Mutation | p.T49I | 1 |
RPS9 | COAD | chr19 | 54710158 | 54710158 | C | T | Missense_Mutation | p.R79W | 1 |
RPS9 | LIHC | chr19 | 54705083 | 54705083 | A | - | Frame_Shift_Del | p.K11fs | 1 |
RPS9 | ACC | chr19 | 54705408 | 54705408 | G | T | Missense_Mutation | p.A51S | 1 |
RPS9 | SKCM | chr19 | 54705103 | 54705103 | G | A | Silent | p.R17R | 1 |
RPS9 | LIHC | chr19 | 54711297 | 54711297 | T | - | Frame_Shift_Del | p.F147fs | 1 |
RPS9 | BLCA | chr19 | 54705081 | 54705081 | G | C | Missense_Mutation | 1 |
Copy number variation (CNV) of RPS9 * Click on the image to open the original image in a new window. |
Fusion gene breakpoints (product of the structural variants (SVs)) across RPS9 * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion genes with this translation factor from FusionGDB2.0. |
FusionGDB2 ID | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
95429 | STAD | TCGA-BR-8284-01A | ARF5 | chr7 | 127229648 | + | RPS9 | chr19 | 54711266 | + |
95429 | STAD | TCGA-VQ-A928 | CNOT3 | chr19 | 54641709 | + | RPS9 | chr19 | 54705027 | + |
95429 | OV | TCGA-31-1956 | COL6A3 | chr2 | 238305369 | - | RPS9 | chr19 | 54710143 | + |
95429 | STAD | TCGA-CD-8531 | FADS3 | chr11 | 61644337 | - | RPS9 | chr19 | 54711265 | + |
95429 | N/A | AX397221 | FLRT2 | chr14 | 86078400 | - | RPS9 | chr19 | 54711515 | - |
95429 | N/A | AA531389 | NUP155 | chr5 | 37335260 | - | RPS9 | chr19 | 54711515 | - |
95429 | OV | TCGA-24-1850-01A | PLD3 | chr19 | 40854631 | + | RPS9 | chr19 | 54735617 | + |
95429 | OV | TCGA-24-1850-01A | PLD3 | chr19 | 40854675 | + | RPS9 | chr19 | 54735617 | + |
95429 | COAD | TCGA-A6-2679-01A | PYROXD1 | chr12 | 21590946 | + | RPS9 | chr19 | 54705034 | + |
78184 | N/A | BI858487 | RPS9 | chr19 | 54711512 | + | ADAMTS9 | chr3 | 64664203 | - |
101248 | N/A | BQ924718 | RPS9 | chr19 | 54711515 | + | BAIAP2L1 | chr7 | 98016023 | - |
78184 | LAML | TCGA-AB-2894 | RPS9 | chr19 | 54705477 | + | CDC45 | chr22 | 19468475 | + |
97030 | OV | TCGA-29-1777 | RPS9 | chr19 | 54705149 | + | CLTA | chr9 | 36197547 | + |
101694 | N/A | AW771764 | RPS9 | chr19 | 54711406 | - | COMMD5 | chr8 | 146067596 | - |
91571 | N/A | AA533482 | RPS9 | chr19 | 54711512 | + | DHRS7B | chr17 | 21039824 | + |
101590 | READ | TCGA-AG-3878 | RPS9 | chr19 | 54711350 | + | EEF1D | chr8 | 144679593 | - |
102278 | COAD | TCGA-AZ-4308-01A | RPS9 | chr19 | 54705058 | + | HNRNPUL1 | chr19 | 41782087 | + |
99572 | HNSC | TCGA-F7-A50G | RPS9 | chr19 | 54711294 | + | KRT17 | chr17 | 39780378 | - |
93822 | Non-Cancer | ERR315395 | RPS9 | chr19 | 54705149 | + | MYADM | chr19 | 54376782 | + |
82531 | N/A | AW410007 | RPS9 | chr19 | 54705054 | + | P4HB | chr17 | 79804852 | - |
98891 | COAD | TCGA-AA-3529-01A | RPS9 | chr19 | 54705152 | + | PDE6A | chr5 | 149246799 | - |
78184 | N/A | BU590293 | RPS9 | chr19 | 54711372 | + | PSMD4 | chr1 | 151239761 | + |
90875 | N/A | DB097076 | RPS9 | chr19 | 54705457 | + | SCAF8 | chr6 | 155143480 | + |
78184 | BRCA | TCGA-D8-A1XQ-01A | RPS9 | chr19 | 54705477 | + | TSEN34 | chr19 | 54697030 | + |
95429 | N/A | CD743028 | SRM | chr1 | 11116695 | + | RPS9 | chr19 | 54705463 | - |
95431 | N/A | BQ063558 | TUFM | chr16 | 28857291 | - | RPS9 | chr19 | 54705436 | + |
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Kaplan-Meier plots with logrank tests of overall survival (OS) |
Cancer type | Translation factor | Coefficent | Hazard ratio | Wald test pval | Likelihool ratio pval | Logrank test pval | # samples |
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Differential gene expression between female and male. (Wilcoxon test, pval<0.05) |
Cancer type | Translation factor | pval | adj.p |
KIRC | RPS9 | 0.000162191290161684 | 0.0045 |
SARC | RPS9 | 0.0104857253514913 | 0.28 |
LGG | RPS9 | 0.0471299329342534 | 1 |
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Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05) |
Cancer type | Translation factor | pval | adj.p |
LUSC | RPS9 | 0.015475595202452 | 0.51 |
PAAD | RPS9 | 0.0235242490170122 | 0.75 |
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Drugs targeting genes involved in this translation factor. (DrugBank Version 5.1.8 2021-05-08) |
UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Diseases associated with this translation factor. (DisGeNet 4.0) |
Disease ID | Disease Name | # PubMeds | Disease source |