|
Translation Factor: RPS14 (NCBI Gene ID:6208) |
|
Gene Summary |
Gene Information | Gene Name: RPS14 | Gene ID: 6208 | Gene Symbol | RPS14 | Gene ID | 6208 |
Gene Name | ribosomal protein S14 | |
Synonyms | EMTB|S14 | |
Cytomap | 5q33.1 | |
Type of Gene | protein-coding | |
Description | 40S ribosomal protein S14emetine resistancesmall ribosomal subunit protein uS11 | |
Modification date | 20200313 | |
UniProtAcc | P62263 |
Child GO biological process term(s) under GO:0006412 |
GO ID | GO term |
GO:0006417 | Regulation of translation |
GO:0005840 | Ribosome |
GO:0002181 | Cytoplasmic translation |
GO:0006412 | Translation |
Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | RPS14 | GO:0000122 | negative regulation of transcription by RNA polymerase II | 7867928 |
Inferred gene age of translation factor. |
Gene | Inferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25 |
RPS14 | >1119.25 |
Top |
|
We searched PubMed using 'RPS14[title] AND translation [title] AND human.' |
Gene | Title | PMID |
RPS14 | Integrated analyses of translatome and proteome identify the rules of translation selectivity in RPS14-deficient cells | 32327500 |
Top |
|
Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. For more annotations, please visit our ExonSkipDB. |
Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ENST | Exon skip start (DNA) | Exon Skip end (DNA) | ORF |
Exon skipping position in the amino acid sequence. |
ENST | Exon skip start (DNA) | Exon Skip end (DNA) | Len(transcript seq) | Exon skip start (mRNA) | Exon Skip end (mRNA) | Len(amino acid seq) | Exon skip start (AA) | Exon Skip end (AA) |
Potentially (partially) lost protein functional features of UniProt. |
UniProtAcc | Exon skip start (AA) | Exon Skip end (AA) | Function feature start (AA) | Function feature end (AA) | Functional feature type | Functional feature desc. |
Top |
|
Gene expression level across TCGA pancancer |
Gene expression level across GTEx pantissue |
Expression level of gene isoforms across TCGA pancancer |
Expression level of gene isoforms across GTEx pantissue |
Cancer(tissue) type-specific expression level of Translation factor using z-score distriution |
Differential expression between tumor and matched normal (in the cancer types with more than 10 matched samples) |
Cancer type | Translation factor | FC | adj.pval |
KIRP | RPS14 | -1.10710481020121 | 0.00114433001726866 |
THCA | RPS14 | 1.18855682463527 | 0.0484049760061147 |
Top |
|
Translation factor expression regulation through miRNA binding |
Cancer type | Gene | miRNA | TargetScan binding score (Context++ score percentile) | Coefficient | Pvalue |
Translation factor expression regulation through methylation in the promoter of Translation factor |
Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
Translation factor expression regulation through methylation in the gene body of Translation factor (positive regulation) |
Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
HNSC | RPS14 | 1 | 2 | 0.0382181799942628 | 0.181864817927171 | 0.216873538461538 | 0.101728852830054 | 0.00381763714386424 |
UVM | RPS14 | 1 | 2 | 0.0126154604073817 | 0.184651948051948 | 0.216613793103448 | -0.623623999221273 | 0.028451706108069 |
Translation factor expression regulation through copy number variation of Translation factor |
Cancer type | Gene | Coefficient | Pvalue |
PCPG | RPS14 | 0.076385995 | 0.018723248 |
Top |
|
Strongly correlated genes belong to cellular important gene groups with RPS14 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green) |
Cancer type | Gene group | Translation factor | Correlated gene | Coefficient | Pvalue |
ACC | TSG | RPS14 | GNB2L1 | 0.850745978 | 3.27E-23 |
BLCA | TSG | RPS14 | GNB2L1 | 0.895120595 | 7.61E-151 |
BRCA | TSG | RPS14 | GNB2L1 | 0.828188812 | 4.58E-308 |
CESC | TSG | RPS14 | GNB2L1 | 0.890090344 | 1.95E-106 |
CHOL | Cell metabolism gene | RPS14 | PFDN5 | 0.807990775 | 1.96E-11 |
CHOL | CGC | RPS14 | NACA | 0.879571893 | 1.83E-15 |
CHOL | Epifactor | RPS14 | FBL | 0.805858513 | 2.42E-11 |
CHOL | TSG | RPS14 | GNB2L1 | 0.925280013 | 1.02E-19 |
COAD | TSG | RPS14 | GNB2L1 | 0.857398528 | 2.38E-96 |
DLBC | Cell metabolism gene | RPS14 | GFER | 0.806769767 | 4.42E-12 |
DLBC | Cell metabolism gene | RPS14 | PGLS | 0.82484826 | 5.68E-13 |
DLBC | Cell metabolism gene | RPS14 | TOMM22 | 0.827972863 | 3.89E-13 |
DLBC | Cell metabolism gene | RPS14 | GEMIN7 | 0.83610218 | 1.40E-13 |
DLBC | Cell metabolism gene | RPS14 | TIMM9 | 0.843599326 | 5.20E-14 |
DLBC | Cell metabolism gene | RPS14 | FAU | 0.845373474 | 4.08E-14 |
DLBC | Cell metabolism gene | RPS14 | PFDN5 | 0.855481606 | 9.67E-15 |
DLBC | Cell metabolism gene | RPS14 | SNRPD2 | 0.855795814 | 9.23E-15 |
DLBC | Cell metabolism gene | RPS14 | NME2 | 0.859228201 | 5.51E-15 |
DLBC | CGC | RPS14 | NACA | 0.879038103 | 2.10E-16 |
DLBC | Epifactor | RPS14 | FBL | 0.806471272 | 4.56E-12 |
DLBC | TF | RPS14 | ZNF581 | 0.818470458 | 1.20E-12 |
DLBC | TF | RPS14 | NME2 | 0.859228201 | 5.51E-15 |
DLBC | TSG | RPS14 | GADD45GIP1 | 0.812810112 | 2.28E-12 |
DLBC | TSG | RPS14 | HINT1 | 0.828016941 | 3.87E-13 |
DLBC | TSG | RPS14 | GLTSCR2 | 0.833753345 | 1.89E-13 |
DLBC | TSG | RPS14 | GNB2L1 | 0.945064818 | 5.67E-24 |
GBM | Cell metabolism gene | RPS14 | ZNRD1 | 0.801362935 | 8.75E-40 |
GBM | Cell metabolism gene | RPS14 | LSM1 | 0.809968025 | 3.01E-41 |
GBM | Cell metabolism gene | RPS14 | TIMM8B | 0.81317546 | 8.20E-42 |
GBM | Cell metabolism gene | RPS14 | PIGC | 0.814574567 | 4.61E-42 |
GBM | Cell metabolism gene | RPS14 | PSMB3 | 0.814595046 | 4.58E-42 |
GBM | Cell metabolism gene | RPS14 | SSR2 | 0.820125292 | 4.49E-43 |
GBM | Cell metabolism gene | RPS14 | LSM2 | 0.821360787 | 2.64E-43 |
GBM | Cell metabolism gene | RPS14 | PSMB4 | 0.823781124 | 9.25E-44 |
GBM | Cell metabolism gene | RPS14 | PSMA5 | 0.824219881 | 7.64E-44 |
GBM | Cell metabolism gene | RPS14 | SSR4 | 0.8297281 | 6.55E-45 |
GBM | Cell metabolism gene | RPS14 | FAU | 0.846518733 | 2.05E-48 |
GBM | Cell metabolism gene | RPS14 | SNRPD2 | 0.852074012 | 1.15E-49 |
GBM | Cell metabolism gene | RPS14 | PFDN5 | 0.86822012 | 1.27E-53 |
GBM | Cell metabolism gene | RPS14 | SNRPG | 0.873031898 | 6.68E-55 |
GBM | Epifactor | RPS14 | DPY30 | 0.815293895 | 3.43E-42 |
GBM | TF | RPS14 | GTF2B | 0.809594601 | 3.50E-41 |
HNSC | TSG | RPS14 | GNB2L1 | 0.883309045 | 1.03E-187 |
KICH | Cell metabolism gene | RPS14 | TBCA | 0.811946609 | 1.61E-22 |
KICH | TSG | RPS14 | GNB2L1 | 0.890290312 | 3.73E-32 |
KIRP | Cell metabolism gene | RPS14 | FAU | 0.806687098 | 2.60E-75 |
KIRP | Cell metabolism gene | RPS14 | SNRPD2 | 0.813465745 | 1.53E-77 |
KIRP | TSG | RPS14 | GNB2L1 | 0.873825215 | 1.53E-102 |
LGG | Cell metabolism gene | RPS14 | FAU | 0.855074061 | 9.96E-153 |
LGG | TSG | RPS14 | GNB2L1 | 0.827651923 | 1.49E-134 |
LIHC | TSG | RPS14 | GNB2L1 | 0.884650031 | 1.36E-141 |
MESO | TSG | RPS14 | GNB2L1 | 0.930076997 | 1.00E-38 |
OV | TSG | RPS14 | GNB2L1 | 0.810008307 | 6.62E-73 |
PAAD | TSG | RPS14 | GNB2L1 | 0.872783262 | 2.83E-58 |
PCPG | Epifactor | RPS14 | FBL | 0.813593106 | 1.94E-45 |
PCPG | TSG | RPS14 | GNB2L1 | 0.90552909 | 8.45E-71 |
PRAD | Cell metabolism gene | RPS14 | NME2 | 0.815931975 | 1.65E-132 |
PRAD | Cell metabolism gene | RPS14 | TIMM9 | 0.821550828 | 7.82E-136 |
PRAD | Cell metabolism gene | RPS14 | SNRPD2 | 0.852190575 | 2.79E-156 |
PRAD | Cell metabolism gene | RPS14 | FAU | 0.855655131 | 6.98E-159 |
PRAD | CGC | RPS14 | NACA | 0.856739963 | 1.04E-159 |
PRAD | Epifactor | RPS14 | FBL | 0.882439216 | 1.29E-181 |
PRAD | TF | RPS14 | NME2 | 0.815931975 | 1.65E-132 |
PRAD | TSG | RPS14 | GNB2L1 | 0.895914651 | 2.93E-195 |
READ | TSG | RPS14 | GNB2L1 | 0.837394781 | 8.91E-29 |
SKCM | TSG | RPS14 | GNB2L1 | 0.870955791 | 9.24E-148 |
TGCT | Epifactor | RPS14 | FBL | 0.817320004 | 1.05E-38 |
TGCT | TSG | RPS14 | GNB2L1 | 0.887161789 | 1.37E-53 |
THCA | Cell metabolism gene | RPS14 | PFDN5 | 0.822736683 | 5.90E-142 |
THCA | Cell metabolism gene | RPS14 | FAU | 0.853976256 | 7.29E-164 |
THCA | Cell metabolism gene | RPS14 | SNRPD2 | 0.869829751 | 4.83E-177 |
THCA | Epifactor | RPS14 | FBL | 0.838342634 | 2.58E-152 |
THCA | TSG | RPS14 | GNB2L1 | 0.834107901 | 2.13E-149 |
THYM | Cell metabolism gene | RPS14 | POLR2J | 0.8009647 | 1.67E-28 |
THYM | Cell metabolism gene | RPS14 | EXOSC4 | 0.801085349 | 1.61E-28 |
THYM | Cell metabolism gene | RPS14 | SNRPD3 | 0.802140022 | 1.21E-28 |
THYM | Cell metabolism gene | RPS14 | POLR2H | 0.806570164 | 3.59E-29 |
THYM | Cell metabolism gene | RPS14 | DPM3 | 0.807963609 | 2.44E-29 |
THYM | Cell metabolism gene | RPS14 | APRT | 0.809005749 | 1.82E-29 |
THYM | Cell metabolism gene | RPS14 | IMPDH2 | 0.817231224 | 1.68E-30 |
THYM | Cell metabolism gene | RPS14 | TIMM50 | 0.820420154 | 6.48E-31 |
THYM | Cell metabolism gene | RPS14 | PSMB7 | 0.824063338 | 2.13E-31 |
THYM | Cell metabolism gene | RPS14 | TIMM8B | 0.82862294 | 5.08E-32 |
THYM | Cell metabolism gene | RPS14 | LCMT1 | 0.833535353 | 1.04E-32 |
THYM | Cell metabolism gene | RPS14 | GFER | 0.837064787 | 3.20E-33 |
THYM | Cell metabolism gene | RPS14 | TIMM13 | 0.842498562 | 4.97E-34 |
THYM | Cell metabolism gene | RPS14 | TOMM7 | 0.844891049 | 2.14E-34 |
THYM | Cell metabolism gene | RPS14 | POLR2I | 0.853101742 | 1.06E-35 |
THYM | Cell metabolism gene | RPS14 | POLR2F | 0.853273457 | 9.91E-36 |
THYM | Cell metabolism gene | RPS14 | SLC27A5 | 0.857993354 | 1.61E-36 |
THYM | Cell metabolism gene | RPS14 | SNRPD2 | 0.860583698 | 5.80E-37 |
THYM | Cell metabolism gene | RPS14 | PGLS | 0.864357157 | 1.26E-37 |
THYM | Cell metabolism gene | RPS14 | DPM2 | 0.883993193 | 1.94E-41 |
THYM | Cell metabolism gene | RPS14 | SSR2 | 0.888517751 | 2.05E-42 |
THYM | Cell metabolism gene | RPS14 | PFDN5 | 0.900502077 | 3.21E-45 |
THYM | Cell metabolism gene | RPS14 | FAU | 0.90607359 | 1.20E-46 |
THYM | CGC | RPS14 | RBM10 | 0.811191471 | 9.76E-30 |
THYM | Epifactor | RPS14 | EXOSC4 | 0.801085349 | 1.61E-28 |
THYM | Epifactor | RPS14 | C17orf49 | 0.80544487 | 4.91E-29 |
THYM | Epifactor | RPS14 | TAF10 | 0.818708639 | 1.08E-30 |
THYM | Epifactor | RPS14 | BRMS1 | 0.819443779 | 8.69E-31 |
THYM | Epifactor | RPS14 | ZNHIT1 | 0.823008011 | 2.94E-31 |
THYM | Epifactor | RPS14 | SIRT6 | 0.826008749 | 1.16E-31 |
THYM | Epifactor | RPS14 | PRPF31 | 0.842564986 | 4.85E-34 |
THYM | Epifactor | RPS14 | FBL | 0.907167041 | 6.14E-47 |
THYM | IUPHAR | RPS14 | SIRT3 | 0.811693081 | 8.46E-30 |
THYM | IUPHAR | RPS14 | IMPDH2 | 0.817231224 | 1.68E-30 |
THYM | IUPHAR | RPS14 | SIRT6 | 0.826008749 | 1.16E-31 |
THYM | IUPHAR | RPS14 | SLC27A5 | 0.857993354 | 1.61E-36 |
THYM | TF | RPS14 | ZNF32 | 0.810303746 | 1.26E-29 |
THYM | TF | RPS14 | REXO4 | 0.812962466 | 5.87E-30 |
THYM | TF | RPS14 | ZNF428 | 0.819355831 | 8.93E-31 |
THYM | TF | RPS14 | THAP3 | 0.830182784 | 3.08E-32 |
THYM | TF | RPS14 | ZNF787 | 0.833079158 | 1.20E-32 |
THYM | TF | RPS14 | ZNF524 | 0.833424301 | 1.08E-32 |
THYM | TF | RPS14 | THAP7 | 0.834129641 | 8.52E-33 |
THYM | TF | RPS14 | ZNF581 | 0.844272304 | 2.66E-34 |
THYM | TSG | RPS14 | GABARAP | 0.804726003 | 5.99E-29 |
THYM | TSG | RPS14 | SIRT3 | 0.811693081 | 8.46E-30 |
THYM | TSG | RPS14 | BRMS1 | 0.819443779 | 8.69E-31 |
THYM | TSG | RPS14 | SIRT6 | 0.826008749 | 1.16E-31 |
THYM | TSG | RPS14 | GLTSCR2 | 0.834166666 | 8.42E-33 |
THYM | TSG | RPS14 | GADD45GIP1 | 0.845841713 | 1.52E-34 |
THYM | TSG | RPS14 | TSSC4 | 0.845930753 | 1.47E-34 |
THYM | TSG | RPS14 | GNB2L1 | 0.886363813 | 6.04E-42 |
UCEC | TSG | RPS14 | GNB2L1 | 0.883825044 | 1.41E-67 |
UCS | Cell metabolism gene | RPS14 | POLR2J | 0.8009647 | 1.67E-28 |
UCS | Cell metabolism gene | RPS14 | EXOSC4 | 0.801085349 | 1.61E-28 |
UCS | Cell metabolism gene | RPS14 | SNRPD3 | 0.802140022 | 1.21E-28 |
UCS | Cell metabolism gene | RPS14 | POLR2H | 0.806570164 | 3.59E-29 |
UCS | Cell metabolism gene | RPS14 | DPM3 | 0.807963609 | 2.44E-29 |
UCS | Cell metabolism gene | RPS14 | APRT | 0.809005749 | 1.82E-29 |
UCS | Cell metabolism gene | RPS14 | IMPDH2 | 0.817231224 | 1.68E-30 |
UCS | Cell metabolism gene | RPS14 | TIMM50 | 0.820420154 | 6.48E-31 |
UCS | Cell metabolism gene | RPS14 | PSMB7 | 0.824063338 | 2.13E-31 |
UCS | Cell metabolism gene | RPS14 | TIMM8B | 0.82862294 | 5.08E-32 |
UCS | Cell metabolism gene | RPS14 | LCMT1 | 0.833535353 | 1.04E-32 |
UCS | Cell metabolism gene | RPS14 | GFER | 0.837064787 | 3.20E-33 |
UCS | Cell metabolism gene | RPS14 | TIMM13 | 0.842498562 | 4.97E-34 |
UCS | Cell metabolism gene | RPS14 | TOMM7 | 0.844891049 | 2.14E-34 |
UCS | Cell metabolism gene | RPS14 | POLR2I | 0.853101742 | 1.06E-35 |
UCS | Cell metabolism gene | RPS14 | POLR2F | 0.853273457 | 9.91E-36 |
UCS | Cell metabolism gene | RPS14 | SLC27A5 | 0.857993354 | 1.61E-36 |
UCS | Cell metabolism gene | RPS14 | SNRPD2 | 0.860583698 | 5.80E-37 |
UCS | Cell metabolism gene | RPS14 | PGLS | 0.864357157 | 1.26E-37 |
UCS | Cell metabolism gene | RPS14 | DPM2 | 0.883993193 | 1.94E-41 |
UCS | Cell metabolism gene | RPS14 | SSR2 | 0.888517751 | 2.05E-42 |
UCS | Cell metabolism gene | RPS14 | PFDN5 | 0.900502077 | 3.21E-45 |
UCS | Cell metabolism gene | RPS14 | FAU | 0.90607359 | 1.20E-46 |
UCS | CGC | RPS14 | RBM10 | 0.811191471 | 9.76E-30 |
UCS | Epifactor | RPS14 | EXOSC4 | 0.801085349 | 1.61E-28 |
UCS | Epifactor | RPS14 | C17orf49 | 0.80544487 | 4.91E-29 |
UCS | Epifactor | RPS14 | TAF10 | 0.818708639 | 1.08E-30 |
UCS | Epifactor | RPS14 | BRMS1 | 0.819443779 | 8.69E-31 |
UCS | Epifactor | RPS14 | ZNHIT1 | 0.823008011 | 2.94E-31 |
UCS | Epifactor | RPS14 | SIRT6 | 0.826008749 | 1.16E-31 |
UCS | Epifactor | RPS14 | PRPF31 | 0.842564986 | 4.85E-34 |
UCS | Epifactor | RPS14 | FBL | 0.907167041 | 6.14E-47 |
UCS | IUPHAR | RPS14 | SIRT3 | 0.811693081 | 8.46E-30 |
UCS | IUPHAR | RPS14 | IMPDH2 | 0.817231224 | 1.68E-30 |
UCS | IUPHAR | RPS14 | SIRT6 | 0.826008749 | 1.16E-31 |
UCS | IUPHAR | RPS14 | SLC27A5 | 0.857993354 | 1.61E-36 |
UCS | TF | RPS14 | ZNF32 | 0.810303746 | 1.26E-29 |
UCS | TF | RPS14 | REXO4 | 0.812962466 | 5.87E-30 |
UCS | TF | RPS14 | ZNF428 | 0.819355831 | 8.93E-31 |
UCS | TF | RPS14 | THAP3 | 0.830182784 | 3.08E-32 |
UCS | TF | RPS14 | ZNF787 | 0.833079158 | 1.20E-32 |
UCS | TF | RPS14 | ZNF524 | 0.833424301 | 1.08E-32 |
UCS | TF | RPS14 | THAP7 | 0.834129641 | 8.52E-33 |
UCS | TF | RPS14 | ZNF581 | 0.844272304 | 2.66E-34 |
UCS | TSG | RPS14 | GABARAP | 0.804726003 | 5.99E-29 |
UCS | TSG | RPS14 | SIRT3 | 0.811693081 | 8.46E-30 |
UCS | TSG | RPS14 | BRMS1 | 0.819443779 | 8.69E-31 |
UCS | TSG | RPS14 | SIRT6 | 0.826008749 | 1.16E-31 |
UCS | TSG | RPS14 | GLTSCR2 | 0.834166666 | 8.42E-33 |
UCS | TSG | RPS14 | GADD45GIP1 | 0.845841713 | 1.52E-34 |
UCS | TSG | RPS14 | TSSC4 | 0.845930753 | 1.47E-34 |
UCS | TSG | RPS14 | GNB2L1 | 0.886363813 | 6.04E-42 |
UVM | Cell metabolism gene | RPS14 | POLR1D | 0.803218534 | 3.15E-19 |
UVM | Cell metabolism gene | RPS14 | TOMM7 | 0.80435259 | 2.57E-19 |
UVM | Cell metabolism gene | RPS14 | FAU | 0.848945522 | 2.63E-23 |
UVM | CGC | RPS14 | NACA | 0.860295841 | 1.57E-24 |
UVM | Epifactor | RPS14 | FBL | 0.840186541 | 1.99E-22 |
UVM | TF | RPS14 | ZNF581 | 0.803207477 | 3.15E-19 |
UVM | TSG | RPS14 | GAS5 | 0.815968103 | 2.99E-20 |
UVM | TSG | RPS14 | GLTSCR2 | 0.845341314 | 6.14E-23 |
UVM | TSG | RPS14 | GNB2L1 | 0.912386167 | 5.43E-32 |
Top |
|
Protein 3D structure Visit iCn3D. |
Top |
|
Protein-protein interaction networks * Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
Overlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
* Edge colors based on TCGA cancer types. |
* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P)) |
Cancer type | Translation factor | Interacting protein coding gene | FC | adj.pval |
KIRP | RPS14 | RPL18A | -1.51651392808885 | 0.00016188295558095 |
KICH | RPS14 | RPS27A | 1.75396693785956 | 0.000187873840332031 |
KIRP | RPS14 | RPS16 | -1.35957043617517 | 0.00019507110118866 |
COAD | RPS14 | RPS3 | 1.48730375143014 | 0.000411599874496461 |
KIRP | RPS14 | RPS11 | -1.01861570565103 | 0.00105937570333481 |
LIHC | RPS14 | RPL8 | -4.84588284974558 | 0.00110314154326131 |
PRAD | RPS14 | RPL18A | 1.40600175748499 | 0.00205137828390396 |
KICH | RPS14 | RPL19 | 1.36901182894089 | 0.00250792503356934 |
KICH | RPS14 | RPS12 | 1.26997381758431 | 0.00308787822723389 |
LUAD | RPS14 | RPL19 | -1.31398026615725 | 0.00993159558412698 |
THCA | RPS14 | RPS16 | -6.16322798156577 | 0.0115764821363307 |
BLCA | RPS14 | RPS12 | -1.47804673440421 | 0.0204124450683594 |
BLCA | RPS14 | RPS27A | -1.04747470069188 | 0.0258216857910156 |
HNSC | RPS14 | RPS3 | -4.73505819095135 | 0.0273726439852453 |
COAD | RPS14 | RPS11 | 1.35307548998204 | 0.0312207043170929 |
LUSC | RPS14 | RPL19 | -2.14669889516666 | 0.044366810398747 |
KIRC | RPS14 | RPL19 | -2.73485271276676 | 1.33980982873695e-10 |
BRCA | RPS14 | RPS12 | -4.91239327478244 | 1.85340619742495e-09 |
KIRP | RPS14 | RPL37 | -1.17421621947139 | 2.26888805627823e-05 |
KIRC | RPS14 | RPL35 | -1.06475238059392 | 2.72286325678163e-08 |
KIRC | RPS14 | RPL8 | -1.18252459971773 | 5.64962994208288e-07 |
KIRP | RPS14 | RPL8 | -1.53003692350119 | 6.0301274061203e-05 |
KIRC | RPS14 | RPS16 | -1.66149869889384 | 7.8509870430991e-09 |
BRCA | RPS14 | RPS27A | -4.28512148200424 | 7.8788217967112e-14 |
KIRC | RPS14 | RPL37 | -2.87198822058464 | 8.03913394748564e-12 |
KIRP | RPS14 | RPL35 | -1.52981101975496 | 9.0546440333128e-05 |
KIRC | RPS14 | RPS3 | -1.29560847926387 | 9.05905681935088e-10 |
KIRC | RPS14 | RPL18A | -4.43079304960843 | 9.2516163152192e-11 |
Protein-protein interactors with this translation factor (BIOGRID-3.4.160) |
PPI interactors with RPS14 |
TAF9, MAGEB2, RIPK2, TRIP6, NELFCD, RBBP6, MEPCE, Mapk13, CALM1, EBNA-LP, VHL, RAD21, MDM2, SIRT7, CUL3, CUL4A, CUL4B, CUL5, CUL2, CDK2, CUL1, COPS5, COPS6, CAND1, RPS4X, APP, RPL11, RPL15, RPL18, RPL19, RPL30, RPL31, RPL37A, RPL4, RPL6, RPL7, RPL9, RPS11, RPS13, RPS15A, RPS23, RPS24, RPS2, RPS6, RPS7, RPS8, RPL23, RPS3, RPL5, RPS5, RPS10, RPL18A, RPL23A, RPLP2, RPSA, RPS19, RPLP0, RPS16, RPS25, RPL7A, RPS15, RPS9, RPS26, RPS3A, RPS29, EEF1A1, NOLC1, MYBBP1A, FBL, NOP58, U2AF1, NHP2L1, HNRNPM, TOP1, ILF3, HNRNPU, DHX9, GNL3, RPLP0P6, NCSTN, PRPF8, RANBP2, RBM39, RPL10L, HIST1H2AA, HP1BP3, ESR1, SENP8, SMURF1, FN1, VCAM1, SMAD2, UBL4A, ITGA4, PAN2, CD81, IGSF8, ICAM1, PEX6, RLIM, TMEM33, TARDBP, PARK2, LARP1, RPS12, RPS18, RPS20, RPS27, RPS28, WIBG, SERBP1, TSR1, ZBTB1, AURKA, CEP250, CEP57, CEP76, TP53, TUBG1, TUBGCP3, HUWE1, FUS, CUL7, CCDC8, EED, RPS6KB2, HNRNPUL2, NDUFS4, RPL10A, RPL12, RPL17, RPL27A, RPL28, AK3, GGPS1, MRPL15, MRPL3, RPL10, RPL13, RPL13A, RPL14, RPL21, RPL22, RPL24, RPL26, RPL27, RPL3, RPL34, RPL35, RPL35A, RPL36, RPL38, RPL8, RPLP1, LOC101929876, SEC61A1, UBA52, BLM, XPO1, HIST1H3E, AHSA1, NPM1, NOP56, CENPQ, CBX8, Cbx1, Eif3a, Eif3e, Rpl35, Srp72, Rrbp1, Fbxo21, TP73, CRY1, CRY2, MCM2, Ksr1, Mdm2, ESRRB, RC3H1, PCMTD1, NOB1, FRMD8, CENPV, RRP12, ZNF430, RBM19, CCZ1, TAF1D, SDAD1, CEBPZ, TAF1C, KRR1, RPL26L1, NAT10, NOC4L, RPL36AL, KRI1, NOC2L, RRS1, BMS1, YTHDC2, DDX18, LTV1, ZNF121, PDCD11, PPAN-P2RY11, RBM28, NGDN, PRKRIR, BUD13, REXO4, DDX31, CCDC137, STAU1, NOP14, PRPF4B, DDX24, DCAF5, RPL32, CDK12, KIAA0020, NKTR, RRP8, SPTY2D1, ZNF574, SRPK1, TTF1, RPF2, DDX54, NSA2, GTPBP4, RBM42, RBMX2, ZBTB24, DHX57, CCDC59, DHX30, L3HYPDH, NOP9, NCL, CYLD, TRIM25, HEY1, BRCA1, ACO2, APOE, WDR77, CTNNB1, IQGAP1, TRIP4, CCNT1, HDAC4, KRAS, MATN2, PCBP1, YAP1, UBE2M, EFTUD2, AAR2, PIH1D1, TNIP2, CHD3, CHD4, RNF31, CDC34, SPDL1, RIOK1, HEXIM1, LARP7, RNF123, SNAI1, AGR2, RECQL4, DCPS, REST, MYC, Prkaa1, Prkab1, AURKAIP1, METTL3, METTL14, KIAA1429, EIF4B, RC3H2, ZBTB7A, PHB, USP14, NR2C2, PPP1CC, CTCF, ATXN3, VRK1, VRK3, HIST1H4A, SNRNP70, ITFG1, ARAF, HMGB1, PPP1CA, BIRC3, NFX1, WWP2, SOX2, TRIM28, ARIH2, PINK1, TFCP2, FANCD2, HCVgp1, ZC3H18, CERK, FGD5, PTCHD2, SNIP1, NEK4, DUX4, CIT, ANLN, AURKB, CHMP4B, CHMP4C, ECT2, KIF14, KIF20A, KIF23, PRC1, C1QBP, INS, NDN, Rnf183, BRD4, RBM45, CIC, Apc2, FBP1, LGALS9, RIN3, POU2F1, SPOP, UFL1, DDRGK1, TRIM37, ATG10, ATG3, FZR1, WDR5, NUDCD2, RSL1D1, URB1, PURG, CCDC86, RPL23AP32, RPL7L1, PRKRA, H1FOO, NVL, SPOCK2, FGF13, LY86, DDX27, HIST1H1B, PPP1R9B, FGFBP1, CUEDC1, SPECC1L, HIST1H2AM, LIN28A, MTX3, RPSAP58, NEIL1, SRSF6, MYO18A, ZNF346, MTX2, SPRTN, BTF3, SLFN11, FBXW7, RCHY1, CCNF, MAP1LC3B, PSMD9, ZEB1, |
Top |
|
Clinically associated variants from ClinVar. |
Gene | Chr | Position | RefSeq | VarSeq | RefSeeq | VarType | Pathogenic | Disease | VarInfo |
nsSNVs with sample frequency (size of circle) from TCGA 33 cancers. |
SNVs and Indels |
Gene | Cancer type | Chromosome | Start | End | RefSeeq | MutSeq | Mutation type | AAchange | # samples |
RPS14 | ESCA | chr5 | 149827198 | 149827198 | G | C | Missense_Mutation | p.I33M | 5 |
RPS14 | KIRP | chr5 | 149827271 | 149827271 | T | C | Missense_Mutation | p.K9R | 4 |
RPS14 | SKCM | chr5 | 149826385 | 149826385 | G | A | Silent | p.L97L | 4 |
RPS14 | ESCA | chr5 | 149827257 | 149827257 | C | T | Missense_Mutation | p.V14I | 3 |
RPS14 | BRCA | chr5 | 149826455 | 149826455 | G | C | Missense_Mutation | p.A74G | 3 |
RPS14 | CESC | chr5 | 149826526 | 149826526 | C | T | Silent | 2 | |
RPS14 | UCS | chr5 | 149826514 | 149826514 | G | A | Silent | p.C54C | 2 |
RPS14 | LUAD | chr5 | 149826406 | 149826406 | G | A | Silent | p.I90I | 2 |
RPS14 | ESCA | chr5 | 149827257 | 149827257 | C | T | Missense_Mutation | 2 | |
RPS14 | ESCA | chr5 | 149827255 | 149827255 | G | T | Silent | 2 | |
RPS14 | ESCA | chr5 | 149827255 | 149827255 | G | T | Silent | p.V14V | 2 |
RPS14 | BRCA | chr5 | 149825182 | 149825182 | G | A | Silent | p.I126 | 2 |
RPS14 | STAD | chr5 | 149826448 | 149826448 | C | A | Missense_Mutation | p.L76F | 2 |
RPS14 | STAD | chr5 | 149826384 | 149826384 | G | A | Missense_Mutation | p.R98W | 1 |
RPS14 | KIRP | chr5 | 149827271 | 149827271 | T | C | Missense_Mutation | 1 | |
RPS14 | UCS | chr5 | 149826514 | 149826514 | G | A | Silent | 1 | |
RPS14 | COAD | chr5 | 149826526 | 149826526 | C | T | Silent | p.K50K | 1 |
RPS14 | LIHC | chr5 | 149825226 | 149825226 | C | - | Frame_Shift_Del | p.A112fs | 1 |
RPS14 | LIHC | chr5 | 149827279 | 149827279 | C | - | Frame_Shift_Del | p.G6fs | 1 |
RPS14 | ESCA | chr5 | 149827255 | 149827255 | G | T | Silent | p.V14 | 1 |
RPS14 | LIHC | chr5 | 149823872 | 149823872 | C | T | Missense_Mutation | 1 | |
RPS14 | ESCA | chr5 | 149827198 | 149827198 | G | C | Missense_Mutation | 1 | |
RPS14 | OV | chr5 | 149806650 | 149806660 | AGCATATGGTG | - | Frame_Shift_Del | p.S70fs | 1 |
RPS14 | SKCM | chr5 | 149823899 | 149823899 | G | A | Missense_Mutation | p.P136S | 1 |
RPS14 | SKCM | chr5 | 149826527 | 149826527 | C | T | Splice_Site | 1 | |
RPS14 | HNSC | chr5 | 149825199 | 149825199 | G | T | Missense_Mutation | 1 |
Copy number variation (CNV) of RPS14 * Click on the image to open the original image in a new window. |
Fusion gene breakpoints (product of the structural variants (SVs)) across RPS14 * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion genes with this translation factor from FusionGDB2.0. |
FusionGDB2 ID | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
91685 | N/A | EC556529 | COQ4 | chr9 | 131094534 | + | RPS14 | chr5 | 149823910 | - |
91685 | N/A | EC560630 | FER | chr5 | 108121980 | - | RPS14 | chr5 | 149823825 | + |
91685 | N/A | AA450315 | HDLBP | chr2 | 242176108 | - | RPS14 | chr5 | 149823912 | - |
91685 | N/A | AA533122 | KCNJ4 | chr22 | 38844251 | - | RPS14 | chr5 | 149823801 | + |
91685 | N/A | AA572870 | MAGI3 | chr1 | 114052999 | + | RPS14 | chr5 | 149823801 | + |
91685 | N/A | CN271804 | METTL4 | chr18 | 2542393 | - | RPS14 | chr5 | 149823882 | - |
91685 | N/A | AA314699 | MINOS1 | chr1 | 19935110 | + | RPS14 | chr5 | 149827301 | - |
91685 | N/A | AA534250 | MINOS1 | chr1 | 19935119 | + | RPS14 | chr5 | 149823827 | + |
91685 | N/A | AA578345 | MINOS1 | chr1 | 19934759 | - | RPS14 | chr5 | 149823802 | + |
91685 | N/A | AA747261 | MINOS1 | chr1 | 19934680 | - | RPS14 | chr5 | 149823801 | + |
91685 | N/A | BF344377 | MINOS1-NBL1 | chr1 | 19935110 | + | RPS14 | chr5 | 149827301 | - |
91685 | N/A | AA532581 | MSI2 | chr17 | 55664211 | - | RPS14 | chr5 | 149823801 | + |
91040 | LUAD | TCGA-73-4666-01A | RPS14 | chr5 | 149823794 | - | AP1G2 | chr14 | 24037279 | - |
103122 | N/A | AA524656 | RPS14 | chr5 | 149823801 | - | CNBD2 | chr20 | 34582500 | + |
91800 | N/A | BI857979 | RPS14 | chr5 | 149823801 | - | DPP6 | chr7 | 153462619 | + |
103040 | OV | TCGA-13-0901-01B | RPS14 | chr5 | 149826365 | - | GAPDH | chr12 | 6647331 | + |
77405 | LUSC | TCGA-85-8584 | RPS14 | chr5 | 149828778 | - | IGHG3 | chr14 | 106329449 | - |
77405 | LUSC | TCGA-60-2714 | RPS14 | chr5 | 149829233 | - | IGLC3 | chr22 | 23241806 | + |
96006 | N/A | BI859792 | RPS14 | chr5 | 149823792 | - | KCNQ5 | chr6 | 73222484 | + |
100402 | BLCA | TCGA-CU-A72E | RPS14 | chr5 | 149826364 | - | MB21D2 | chr3 | 192517439 | - |
100402 | BLCA | TCGA-CU-A72E-01A | RPS14 | chr5 | 149826365 | - | MB21D2 | chr3 | 192517439 | - |
102773 | N/A | AW023874 | RPS14 | chr5 | 149823801 | - | MELK | chr9 | 36616843 | - |
98923 | N/A | BM014658 | RPS14 | chr5 | 149823801 | - | MINOS1 | chr1 | 19934605 | + |
88106 | N/A | BG034577 | RPS14 | chr5 | 149823796 | - | PDGFA | chr7 | 537505 | + |
85354 | N/A | AV695316 | RPS14 | chr5 | 149823802 | - | PTPRJ | chr11 | 48060732 | + |
85779 | N/A | BU602070 | RPS14 | chr5 | 149826368 | - | RPS19 | chr19 | 42373271 | + |
85013 | STAD | TCGA-FP-8211-01A | RPS14 | chr5 | 149827221 | - | RRBP1 | chr20 | 17595519 | - |
99067 | N/A | BM680717 | RPS14 | chr5 | 149823906 | + | WDR6 | chr3 | 49050987 | - |
101154 | N/A | AA548056 | RPS14 | chr5 | 149823801 | - | ZBTB20 | chr3 | 114509457 | - |
77405 | N/A | CF124261 | RPS14 | chr5 | 149823805 | - | ZHX3 | chr20 | 39818668 | - |
91686 | N/A | AV688332 | TMEM135 | chr11 | 86967610 | - | RPS14 | chr5 | 149827405 | - |
Top |
|
Kaplan-Meier plots with logrank tests of overall survival (OS) |
Cancer type | Translation factor | Coefficent | Hazard ratio | Wald test pval | Likelihool ratio pval | Logrank test pval | # samples |
Top |
|
Differential gene expression between female and male. (Wilcoxon test, pval<0.05) |
Cancer type | Translation factor | pval | adj.p |
KIRC | RPS14 | 0.000665526720029359 | 0.019 |
MESO | RPS14 | 0.00118256939477722 | 0.032 |
ACC | RPS14 | 0.00487985610319783 | 0.13 |
Top |
|
Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05) |
Cancer type | Translation factor | pval | adj.p |
LUSC | RPS14 | 0.0289192130697278 | 0.95 |
LGG | RPS14 | 0.0305588450219112 | 0.98 |
PAAD | RPS14 | 0.0480623242419904 | 1 |
Top |
|
Drugs targeting genes involved in this translation factor. (DrugBank Version 5.1.8 2021-05-08) |
UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
|
Diseases associated with this translation factor. (DisGeNet 4.0) |
Disease ID | Disease Name | # PubMeds | Disease source |
C0027947 | Neutropenia | 1 | CTD_human |
C0205696 | Anaplastic carcinoma | 1 | CTD_human |
C0205697 | Carcinoma, Spindle-Cell | 1 | CTD_human |
C0205698 | Undifferentiated carcinoma | 1 | CTD_human |
C0740302 | 5q-syndrome | 1 | CTD_human;GENOMICS_ENGLAND;ORPHANET |
C1257925 | Mammary Carcinoma, Animal | 1 | CTD_human |
C1292779 | Myelodysplastic Syndrome with Isolated del(5q) | 1 | ORPHANET |