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Center for Computational Systems Medicine
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Gene Summary

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Translation studies in PubMed

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Exon Skipping Events

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Expression

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Expression Regulation

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Associated Genes

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Protein 3D Structure

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Protein-Protein Interaction

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Mutations

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Prognostic Analysis

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Gender Association

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Age Association

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Related Drugs

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Related Diseases

Translation Factor: UBA52 (NCBI Gene ID:7311)


Gene Summary

check button Gene Summary
Gene InformationGene Name: UBA52
Gene ID: 7311
Gene Symbol

UBA52

Gene ID

7311

Gene Nameubiquitin A-52 residue ribosomal protein fusion product 1
SynonymsCEP52|HUBCEP52|L40|RPL40
Cytomap

19p13.11

Type of Geneprotein-coding
Descriptionubiquitin-60S ribosomal protein L40ubiquitin carboxyl extension protein 52ubiquitin-52 amino acid fusion proteinubiquitin-CEP52
Modification date20200313
UniProtAcc

P62987


check button Child GO biological process term(s) under GO:0006412
GO IDGO term
GO:0005840Ribosome
GO:0002181Cytoplasmic translation
GO:0006412Translation


check button Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID


check button Inferred gene age of translation factor.
GeneInferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25


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Translation Studies in PubMed

check button We searched PubMed using 'UBA52[title] AND translation [title] AND human.'
GeneTitlePMID
UBA52..


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Exon Skipping Events

check buttonSkipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
For more annotations, please visit our ExonSkipDB.
all structure

check button Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ENSTExon skip start (DNA)Exon Skip end (DNA)ORF
ENST0000059568318683160186834175UTR-5UTR
ENST0000059627318683160186834175UTR-5UTR
ENST000004301571868447118684558In-frame
ENST000004427441868447118684558In-frame
ENST000005951581868447118684558In-frame
ENST000005956831868447118684558In-frame
ENST000005962731868447118684558In-frame
ENST000005963041868447118684558In-frame
ENST000005974511868447118684558In-frame
ENST000005987801868447118684558In-frame
ENST000005995511868447118684558In-frame
ENST000005995951868447118684558In-frame
ENST000004301571868567918685782Frame-shift
ENST000004427441868567918685782Frame-shift
ENST000005951581868567918685782Frame-shift
ENST000005956831868567918685782Frame-shift
ENST000005962731868567918685782Frame-shift
ENST000005963041868567918685782Frame-shift
ENST000005974511868567918685782Frame-shift
ENST000005987801868567918685782Frame-shift
ENST000005995511868567918685782Frame-shift
ENST000005995951868567918685782Frame-shift

check button Exon skipping position in the amino acid sequence.
ENSTExon skip start (DNA)Exon Skip end (DNA)Len(transcript seq)Exon skip start (mRNA)Exon Skip end (mRNA)Len(amino acid seq)Exon skip start (AA)Exon Skip end (AA)
ENST0000059745118684471186845585311402261283463
ENST0000059630418684471186845585712193051283463
ENST0000043015718684471186845585891982841283463
ENST0000059878018684471186845586853654511283463
ENST0000059959518684471186845587091202061283463
ENST0000059955118684471186845587243334191283463
ENST0000059515818684471186845587603764621283463
ENST0000059627318684471186845587814024881283463
ENST0000059568318684471186845587964044901283463
ENST00000442744186844711868455828621622481283463

check button Potentially (partially) lost protein functional features of UniProt.
UniProtAccExon skip start (AA)Exon Skip end (AA)Function feature start (AA)Function feature end (AA)Functional feature typeFunctional feature desc.


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Expression


check buttonGene expression level across TCGA pancancer
all structure

check buttonGene expression level across GTEx pantissue
all structure

check buttonExpression level of gene isoforms across TCGA pancancer
all structure

check buttonExpression level of gene isoforms across GTEx pantissue
all structure

check buttonCancer(tissue) type-specific expression level of Translation factor using z-score distriution
all structure

check buttonDifferential expression between tumor and matched normal (in the cancer types with more than 10 matched samples)
all structure
Cancer typeTranslation factorFCadj.pval
THCAUBA52-5.396747609365280.00553919070100212
HNSCUBA52-2.346366569436720.0165749692632744
KICHUBA52-1.65631241673920.0236499309539795
KIRCUBA52-1.943774594663271.39011934742714e-10


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Expression Regulation


check buttonTranslation factor expression regulation through miRNA binding
Cancer typeGenemiRNATargetScan binding score (Context++ score percentile)CoefficientPvalue


check buttonTranslation factor expression regulation through methylation in the promoter of Translation factor
all structure
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a

check buttonTranslation factor expression regulation through methylation in the gene body of Translation factor (positive regulation)
all structure
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a

check buttonTranslation factor expression regulation through copy number variation of Translation factor
all structure
Cancer typeGeneCoefficientPvalue
ESCAUBA520.0324742650.002993548
KICHUBA520.031387480.048073257

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Associated Genes


check button Strongly correlated genes belong to cellular important gene groups with UBA52 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green)
all structure
Cancer typeGene groupTranslation factorCorrelated geneCoefficientPvalue
CHOLCell metabolism geneUBA52TOMM70.825434863.04E-12
CHOLCell metabolism geneUBA52FAU0.8509500531.33E-13
CHOLCell metabolism geneUBA52PFDN50.8950020621.13E-16
DLBCCell metabolism geneUBA52SEC61G0.8000293778.99E-12
DLBCCell metabolism geneUBA52PSMB70.801352697.84E-12
DLBCCell metabolism geneUBA52SAT20.8020666547.27E-12
DLBCCell metabolism geneUBA52SNRPE0.8024768416.97E-12
DLBCCell metabolism geneUBA52DPM30.8026056836.87E-12
DLBCCell metabolism geneUBA52HSD17B100.8086509573.61E-12
DLBCCell metabolism geneUBA52SSR20.8106794952.89E-12
DLBCCell metabolism geneUBA52MIF0.8110831572.76E-12
DLBCCell metabolism geneUBA52TIMM500.8129679952.24E-12
DLBCCell metabolism geneUBA52PSMC10.8159293761.61E-12
DLBCCell metabolism geneUBA52MED270.816519031.50E-12
DLBCCell metabolism geneUBA52B3GAT30.8192956271.09E-12
DLBCCell metabolism geneUBA52ITPA0.8232046516.91E-13
DLBCCell metabolism geneUBA52PAFAH1B30.8235195966.66E-13
DLBCCell metabolism geneUBA52MMAB0.8257152365.12E-13
DLBCCell metabolism geneUBA52LSM20.8271014474.33E-13
DLBCCell metabolism geneUBA52PHPT10.8279436173.91E-13
DLBCCell metabolism geneUBA52PSMC30.8284136773.69E-13
DLBCCell metabolism geneUBA52PSMB60.834263821.78E-13
DLBCCell metabolism geneUBA52ACOT80.8363252321.36E-13
DLBCCell metabolism geneUBA52PHKG20.8367734041.29E-13
DLBCCell metabolism geneUBA52LSM40.8382958061.05E-13
DLBCCell metabolism geneUBA52TIMM90.8423323946.17E-14
DLBCCell metabolism geneUBA52DGUOK0.8428417855.77E-14
DLBCCell metabolism geneUBA52EXOSC40.8435497895.24E-14
DLBCCell metabolism geneUBA52ECHS10.8438890535.00E-14
DLBCCell metabolism geneUBA52TOMM220.8445144424.59E-14
DLBCCell metabolism geneUBA52GEMIN70.8451323624.22E-14
DLBCCell metabolism geneUBA52PTDSS20.8514854531.73E-14
DLBCCell metabolism geneUBA52UROD0.85263751.47E-14
DLBCCell metabolism geneUBA52POLE40.8533270291.33E-14
DLBCCell metabolism geneUBA52PSMB40.8602178914.74E-15
DLBCCell metabolism geneUBA52PSMD130.8613440993.99E-15
DLBCCell metabolism geneUBA52PGLS0.8617571813.74E-15
DLBCCell metabolism geneUBA52POLR2L0.8681580121.35E-15
DLBCCell metabolism geneUBA52DPM20.8702843029.51E-16
DLBCCell metabolism geneUBA52PSMD40.8763132373.41E-16
DLBCCell metabolism geneUBA52TOMM70.8800929721.74E-16
DLBCCell metabolism geneUBA52TIMM130.8811942581.42E-16
DLBCCell metabolism geneUBA52POLR2I0.8821961551.19E-16
DLBCCell metabolism geneUBA52POLR2J0.883186789.87E-17
DLBCCell metabolism geneUBA52NME20.8878006484.11E-17
DLBCCell metabolism geneUBA52GFER0.8891168853.18E-17
DLBCCell metabolism geneUBA52PSMC50.8919423021.81E-17
DLBCCell metabolism geneUBA52POLR2F0.8952804859.14E-18
DLBCCell metabolism geneUBA52PSMB30.908848434.37E-19
DLBCCell metabolism geneUBA52SNRPD20.9162031936.84E-20
DLBCCell metabolism geneUBA52PFDN50.9242187497.39E-21
DLBCCell metabolism geneUBA52FAU0.9258260414.59E-21
DLBCCGCUBA52MAP2K20.8157992191.63E-12
DLBCCGCUBA52ASPSCR10.8256903575.13E-13
DLBCCGCUBA52NTHL10.8333977831.98E-13
DLBCCGCUBA52HRAS0.8338844511.86E-13
DLBCCGCUBA52COX6C0.8445800484.55E-14
DLBCCGCUBA52TFPT0.8584474946.21E-15
DLBCEpifactorUBA52PPP4C0.8146040061.87E-12
DLBCEpifactorUBA52CCDC1010.8312382452.60E-13
DLBCEpifactorUBA52RBX10.8398920478.55E-14
DLBCEpifactorUBA52EXOSC40.8435497895.24E-14
DLBCEpifactorUBA52SIRT60.8442084264.79E-14
DLBCEpifactorUBA52HMG20B0.8457802593.86E-14
DLBCEpifactorUBA52PRPF310.8499384362.16E-14
DLBCEpifactorUBA52PAF10.8523104451.54E-14
DLBCEpifactorUBA52TFPT0.8584474946.21E-15
DLBCEpifactorUBA52FBL0.8608104544.33E-15
DLBCEpifactorUBA52BRMS10.8643107752.51E-15
DLBCEpifactorUBA52DMAP10.8776372382.70E-16
DLBCEpifactorUBA52MBD30.878542482.30E-16
DLBCEpifactorUBA52TAF100.8795675521.91E-16
DLBCEpifactorUBA52ZNHIT10.9116612222.19E-19
DLBCIUPHARUBA52MFSD2B0.8049541035.36E-12
DLBCIUPHARUBA52MAP2K20.8157992191.63E-12
DLBCIUPHARUBA52HRAS0.8338844511.86E-13
DLBCIUPHARUBA52PSMB60.834263821.78E-13
DLBCIUPHARUBA52SIRT30.8363311491.36E-13
DLBCIUPHARUBA52ATG4B0.8363775271.35E-13
DLBCIUPHARUBA52PHKG20.8367734041.29E-13
DLBCIUPHARUBA52SIRT60.8442084264.79E-14
DLBCIUPHARUBA52MMP240.847109923.21E-14
DLBCIUPHARUBA52SLC25A260.8577838216.86E-15
DLBCKinaseUBA52MAP2K20.8157992191.63E-12
DLBCKinaseUBA52PHKG20.8367734041.29E-13
DLBCTFUBA52ZNF6530.8030712576.55E-12
DLBCTFUBA52ZNF4080.8046016365.57E-12
DLBCTFUBA52ZNF5810.8074811234.09E-12
DLBCTFUBA52REXO40.8126810572.31E-12
DLBCTFUBA52PIN10.8405101467.88E-14
DLBCTFUBA52HMG20B0.8457802593.86E-14
DLBCTFUBA52IRF30.857182987.51E-15
DLBCTFUBA52THAP40.86459722.39E-15
DLBCTFUBA52ZNF4280.8680473531.37E-15
DLBCTFUBA52ZNF4440.8688580061.20E-15
DLBCTFUBA52MBD30.878542482.30E-16
DLBCTFUBA52THAP30.8873674084.47E-17
DLBCTFUBA52NME20.8878006484.11E-17
DLBCTFUBA52THAP70.9105751812.87E-19
DLBCTSGUBA52GLTSCR20.8323092112.27E-13
DLBCTSGUBA52SIRT30.8363311491.36E-13
DLBCTSGUBA52STUB10.8373539041.19E-13
DLBCTSGUBA52PIN10.8405101467.88E-14
DLBCTSGUBA52SIRT60.8442084264.79E-14
DLBCTSGUBA52PARK70.8445568764.57E-14
DLBCTSGUBA52GNB2L10.8461373723.68E-14
DLBCTSGUBA52IRF30.857182987.51E-15
DLBCTSGUBA52BRMS10.8643107752.51E-15
DLBCTSGUBA52TSSC40.9008872942.74E-18
DLBCTSGUBA52GADD45GIP10.9448118986.29E-24
HNSCTSGUBA52GADD45GIP10.8075930061.87E-131
KICHCell metabolism geneUBA52IMPDH20.8030232841.03E-21
KICHCell metabolism geneUBA52SNRPD20.8398283442.44E-25
KICHIUPHARUBA52IMPDH20.8030232841.03E-21
KIRPCell metabolism geneUBA52PSMD130.8002770922.79E-73
KIRPCell metabolism geneUBA52FAU0.860823213.49E-96
KIRPCell metabolism geneUBA52SNRPD20.8651461693.19E-98
LGGCell metabolism geneUBA52FAU0.8316654335.26E-137
LIHCCell metabolism geneUBA52PFDN50.8289997662.58E-108
MESOCell metabolism geneUBA52FAU0.8310218692.30E-23
PCPGCell metabolism geneUBA52PFDN50.8000382716.52E-43
PCPGCGCUBA52MAP2K20.8022617292.59E-43
PCPGIUPHARUBA52MAP2K20.8022617292.59E-43
PCPGKinaseUBA52MAP2K20.8022617292.59E-43
PRADCell metabolism geneUBA52ZNRD10.801774371.29E-124
PRADCell metabolism geneUBA52TOMM220.804263565.90E-126
PRADCell metabolism geneUBA52PSMD40.8054174421.39E-126
PRADCell metabolism geneUBA52LSM40.8056788539.99E-127
PRADCell metabolism geneUBA52HSD17B100.805733269.33E-127
PRADCell metabolism geneUBA52LCMT10.8101684563.25E-129
PRADCell metabolism geneUBA52PSMB30.8137695882.93E-131
PRADCell metabolism geneUBA52GFER0.8144668041.16E-131
PRADCell metabolism geneUBA52TIMM90.8147075988.45E-132
PRADCell metabolism geneUBA52LSM20.8162466481.08E-132
PRADCell metabolism geneUBA52TIMM500.8183799386.07E-134
PRADCell metabolism geneUBA52PFDN50.834963592.89E-144
PRADCell metabolism geneUBA52POLR2F0.8397706341.79E-147
PRADCell metabolism geneUBA52NME20.8397999021.71E-147
PRADCell metabolism geneUBA52TIMM130.8398788221.51E-147
PRADCell metabolism geneUBA52PGLS0.8607270428.12E-163
PRADCell metabolism geneUBA52PSMB70.8616662721.46E-163
PRADCell metabolism geneUBA52TOMM70.8625986782.62E-164
PRADCell metabolism geneUBA52POLR2I0.8845325641.27E-183
PRADCell metabolism geneUBA52FAU0.8861471323.39E-185
PRADCell metabolism geneUBA52SNRPD20.9052121598.13E-206
PRADEpifactorUBA52ZNHIT10.8074440931.07E-127
PRADEpifactorUBA52RUVBL20.817670691.59E-133
PRADEpifactorUBA52FBL0.8847337598.13E-184
PRADIUPHARUBA52CSNK2B0.8103352682.62E-129
PRADTFUBA52NME20.8397999021.71E-147
PRADTFUBA52ZNF5240.8490504695.58E-154
PRADTSGUBA52STUB10.8048411332.86E-126
PRADTSGUBA52GADD45GIP10.8527980419.87E-157
READTSGUBA52GADD45GIP10.8109857131.01E-25
TGCTCell metabolism geneUBA52PSMD80.8012888153.51E-36
TGCTCell metabolism geneUBA52EXOSC50.8050088629.55E-37
TGCTCell metabolism geneUBA52TBCB0.8070807564.57E-37
TGCTCell metabolism geneUBA52POLR2F0.825976593.56E-40
TGCTCell metabolism geneUBA52TIMM130.837448942.98E-42
TGCTCell metabolism geneUBA52POLR2I0.8426824052.97E-43
TGCTCell metabolism geneUBA52SNRPD20.8820107983.46E-52
TGCTEpifactorUBA52EXOSC50.8050088629.55E-37
TGCTEpifactorUBA52FBL0.8879753498.08E-54
THCACell metabolism geneUBA52NME20.8076685127.07E-133
THCACell metabolism geneUBA52FAU0.8295359052.44E-146
THCACell metabolism geneUBA52SNRPD20.8715945531.29E-178
THCAEpifactorUBA52FBL0.8149660623.60E-137
THCATFUBA52NME20.8076685127.07E-133
THCATSGUBA52GNB2L10.8092403518.72E-134
THYMCell metabolism geneUBA52LCMT10.8021948841.20E-28
THYMCell metabolism geneUBA52SNRPD10.8023487121.15E-28
THYMCell metabolism geneUBA52ALG30.8032398519.00E-29
THYMCell metabolism geneUBA52SLC25A110.8054191294.95E-29
THYMCell metabolism geneUBA52PSMA50.805658244.63E-29
THYMCell metabolism geneUBA52PTGES20.8060837284.11E-29
THYMCell metabolism geneUBA52GCDH0.8132433585.41E-30
THYMCell metabolism geneUBA52UROS0.814534923.72E-30
THYMCell metabolism geneUBA52GFER0.814620373.63E-30
THYMCell metabolism geneUBA52IDH3B0.8152535293.01E-30
THYMCell metabolism geneUBA52PSMA40.8158830752.51E-30
THYMCell metabolism geneUBA52TALDO10.8224347223.51E-31
THYMCell metabolism geneUBA52SNRPB0.8234606212.56E-31
THYMCell metabolism geneUBA52DGUOK0.824364521.94E-31
THYMCell metabolism geneUBA52DHRS4L20.8264853219.99E-32
THYMCell metabolism geneUBA52SNRPE0.8270827088.28E-32
THYMCell metabolism geneUBA52POLD40.827490057.28E-32
THYMCell metabolism geneUBA52PAFAH1B30.8276194766.99E-32
THYMCell metabolism geneUBA52DHRS40.8281092995.98E-32
THYMCell metabolism geneUBA52MTX10.829753823.54E-32
THYMCell metabolism geneUBA52HMBS0.8297719853.52E-32
THYMCell metabolism geneUBA52HMOX20.8301787073.09E-32
THYMCell metabolism geneUBA52MTMR140.8305171132.77E-32
THYMCell metabolism geneUBA52SRM0.8308445952.49E-32
THYMCell metabolism geneUBA52SNRPD30.8322151851.60E-32
THYMCell metabolism geneUBA52SMPD20.8336970869.83E-33
THYMCell metabolism geneUBA52WBSCR220.8343670297.88E-33
THYMCell metabolism geneUBA52GALK10.834974236.44E-33
THYMCell metabolism geneUBA52OAZ10.8351835696.01E-33
THYMCell metabolism geneUBA52POLE40.8360260264.54E-33
THYMCell metabolism geneUBA52PSME20.8372403453.02E-33
THYMCell metabolism geneUBA52PSMC50.8375497792.72E-33
THYMCell metabolism geneUBA52PMPCA0.8402828741.07E-33
THYMCell metabolism geneUBA52EXOSC50.8415935876.81E-34
THYMCell metabolism geneUBA52DTYMK0.8434698713.53E-34
THYMCell metabolism geneUBA52TOMM400.8436031063.37E-34
THYMCell metabolism geneUBA52TBCB0.8439189933.01E-34
THYMCell metabolism geneUBA52PSMD80.8457445321.58E-34
THYMCell metabolism geneUBA52PSMB100.8458696391.51E-34
THYMCell metabolism geneUBA52UROD0.8459579481.46E-34
THYMCell metabolism geneUBA52PSME10.8469997451.00E-34
THYMCell metabolism geneUBA52TIMM17B0.8481301856.67E-35
THYMCell metabolism geneUBA52TIMM100.8496876863.77E-35
THYMCell metabolism geneUBA52PGP0.8510794812.25E-35
THYMCell metabolism geneUBA52PSMC10.8528760691.15E-35
THYMCell metabolism geneUBA52GEMIN70.8532312841.01E-35
THYMCell metabolism geneUBA52IDH3G0.8543578466.57E-36
THYMCell metabolism geneUBA52PSMB60.8558529633.70E-36
THYMCell metabolism geneUBA52SEC61G0.8566060272.77E-36
THYMCell metabolism geneUBA52ITPA0.8567954582.57E-36
THYMCell metabolism geneUBA52NANS0.8598646427.72E-37
THYMCell metabolism geneUBA52PHKG20.860470686.06E-37
THYMCell metabolism geneUBA52FPGS0.8606604365.62E-37
THYMCell metabolism geneUBA52HSD17B100.8609101075.09E-37
THYMCell metabolism geneUBA52DPM30.8612605714.42E-37
THYMCell metabolism geneUBA52LSM30.8634604291.81E-37
THYMCell metabolism geneUBA52POLD20.8638372081.56E-37
THYMCell metabolism geneUBA52POLR2J0.8668090544.54E-38
THYMCell metabolism geneUBA52EBP0.8674607243.45E-38
THYMCell metabolism geneUBA52PSMD40.8680509662.69E-38
THYMCell metabolism geneUBA52GMPPA0.8699953361.17E-38
THYMCell metabolism geneUBA52LSM40.8701355111.10E-38
THYMCell metabolism geneUBA52PSMB10.8744654541.65E-39
THYMCell metabolism geneUBA52TOMM220.8809976498.17E-41
THYMCell metabolism geneUBA52PSMD130.8819767215.13E-41
THYMCell metabolism geneUBA52POLR2F0.8822981934.40E-41
THYMCell metabolism geneUBA52POLR2H0.8828117253.44E-41
THYMCell metabolism geneUBA52MVD0.8831371482.94E-41
THYMCell metabolism geneUBA52POLR2I0.88917221.47E-42
THYMCell metabolism geneUBA52EXOSC40.8897703821.08E-42
THYMCell metabolism geneUBA52LSM20.8904389447.66E-43
THYMCell metabolism geneUBA52DPM20.8923407962.84E-43
THYMCell metabolism geneUBA52PFDN50.8925960992.48E-43
THYMCell metabolism geneUBA52TIMM8B0.8942923321.01E-43
THYMCell metabolism geneUBA52APRT0.8954443055.40E-44
THYMCell metabolism geneUBA52SSR20.8964618963.10E-44
THYMCell metabolism geneUBA52GUK10.9003238443.56E-45
THYMCell metabolism geneUBA52TIMM500.9089164882.07E-47
THYMCell metabolism geneUBA52ACOT80.909254461.67E-47
THYMCell metabolism geneUBA52PSMB30.9101690319.36E-48
THYMCell metabolism geneUBA52SLC27A50.9118249993.22E-48
THYMCell metabolism geneUBA52PSMC30.9119554772.96E-48
THYMCell metabolism geneUBA52FAU0.9160006541.99E-49
THYMCell metabolism geneUBA52PSMB70.9212307374.93E-51
THYMCell metabolism geneUBA52TIMM130.9223403712.18E-51
THYMCell metabolism geneUBA52PGLS0.9292308771.01E-53
THYMCell metabolism geneUBA52SNRPD20.9493212633.68E-62
THYMCGCUBA52ASPSCR10.8032903968.87E-29
THYMCGCUBA52MAP2K20.8214483264.74E-31
THYMCGCUBA52MGMT0.835790044.91E-33
THYMCGCUBA52RBM100.8691561.68E-38
THYMCGCUBA52SDHAF20.8765287436.50E-40
THYMCGCUBA52TFPT0.9287825851.46E-53
THYMEpifactorUBA52ACTR50.801165751.58E-28
THYMEpifactorUBA52SS18L20.8107268941.11E-29
THYMEpifactorUBA52CDK50.8122940837.12E-30
THYMEpifactorUBA52TRIM280.8184488971.17E-30
THYMEpifactorUBA52PRMT10.8318458971.80E-32
THYMEpifactorUBA52DMAP10.8366068873.74E-33
THYMEpifactorUBA52EXOSC50.8415935876.81E-34
THYMEpifactorUBA52CXXC10.8419127136.09E-34
THYMEpifactorUBA52ZGPAT0.8435012373.49E-34
THYMEpifactorUBA52INO80E0.8514891451.94E-35
THYMEpifactorUBA52NOC2L0.8540131437.49E-36
THYMEpifactorUBA52MBD30.8623357792.87E-37
THYMEpifactorUBA52CCDC1010.8643388551.27E-37
THYMEpifactorUBA52LAS1L0.8680877792.65E-38
THYMEpifactorUBA52RUVBL20.8701416151.10E-38
THYMEpifactorUBA52RRP80.8703424341.01E-38
THYMEpifactorUBA52PPP4C0.8801583281.21E-40
THYMEpifactorUBA52PAF10.8827204813.59E-41
THYMEpifactorUBA52SIRT60.8844092671.58E-41
THYMEpifactorUBA52EXOSC40.8897703821.08E-42
THYMEpifactorUBA52ZNHIT10.9008538362.63E-45
THYMEpifactorUBA52C17orf490.9101623519.40E-48
THYMEpifactorUBA52TAF100.919482741.74E-50
THYMEpifactorUBA52BRMS10.9266966167.77E-53
THYMEpifactorUBA52TFPT0.9287825851.46E-53
THYMEpifactorUBA52PRPF310.9308888632.57E-54
THYMEpifactorUBA52FBL0.9370858731.10E-56
THYMIUPHARUBA52ATG4B0.8027289831.03E-28
THYMIUPHARUBA52SLC25A110.8054191294.95E-29
THYMIUPHARUBA52PTGES20.8060837284.11E-29
THYMIUPHARUBA52CDK50.8122940837.12E-30
THYMIUPHARUBA52SLC39A30.8153735162.91E-30
THYMIUPHARUBA52TRIM280.8184488971.17E-30
THYMIUPHARUBA52TWF20.8202511936.82E-31
THYMIUPHARUBA52MAP2K20.8214483264.74E-31
THYMIUPHARUBA52PPIA0.8244217331.90E-31
THYMIUPHARUBA52HMOX20.8301787073.09E-32
THYMIUPHARUBA52PRMT10.8318458971.80E-32
THYMIUPHARUBA52SMPD20.8336970869.83E-33
THYMIUPHARUBA52MMP240.8376519012.63E-33
THYMIUPHARUBA52PSMB60.8558529633.70E-36
THYMIUPHARUBA52PHKG20.860470686.06E-37
THYMIUPHARUBA52PSMB10.8744654541.65E-39
THYMIUPHARUBA52EGLN20.8770774995.06E-40
THYMIUPHARUBA52MVD0.8831371482.94E-41
THYMIUPHARUBA52SIRT60.8844092671.58E-41
THYMIUPHARUBA52SLC27A50.9118249993.22E-48
THYMKinaseUBA52CDK50.8122940837.12E-30
THYMKinaseUBA52TRIM280.8184488971.17E-30
THYMKinaseUBA52MAP2K20.8214483264.74E-31
THYMKinaseUBA52ADCK40.8257360811.26E-31
THYMKinaseUBA52PHKG20.860470686.06E-37
THYMTFUBA52ZNF6530.8014657231.46E-28
THYMTFUBA52ZBTB170.8064073053.76E-29
THYMTFUBA52AKAP8L0.8074049132.85E-29
THYMTFUBA52USF20.8168258451.90E-30
THYMTFUBA52THAP70.8182924981.23E-30
THYMTFUBA52ETV20.8245550571.83E-31
THYMTFUBA52ZNF6680.8305294662.76E-32
THYMTFUBA52ZNF320.8363989884.01E-33
THYMTFUBA52USF10.8381953942.19E-33
THYMTFUBA52REXO40.8389714641.68E-33
THYMTFUBA52IRF30.8400354411.17E-33
THYMTFUBA52ZNF4440.8407317319.17E-34
THYMTFUBA52SNAPC20.8410946078.09E-34
THYMTFUBA52CXXC10.8419127136.09E-34
THYMTFUBA52ZGPAT0.8435012373.49E-34
THYMTFUBA52ZNF5240.8453605381.81E-34
THYMTFUBA52PIN10.8493318454.30E-35
THYMTFUBA52RBCK10.8513749872.02E-35
THYMTFUBA52DRAP10.8591869231.01E-36
THYMTFUBA52THAP30.8598390977.80E-37
THYMTFUBA52ZNF6880.8599897787.34E-37
THYMTFUBA52THYN10.8601783786.81E-37
THYMTFUBA52MBD30.8623357792.87E-37
THYMTFUBA52ZNF4280.8651330729.12E-38
THYMTFUBA52ZNF5810.8782558662.94E-40
THYMTFUBA52ZNF7870.8788331482.25E-40
THYMTSGUBA52HTRA20.8105631281.17E-29
THYMTSGUBA52STUB10.8162786112.23E-30
THYMTSGUBA52ST200.8166160992.02E-30
THYMTSGUBA52AIP0.8207295515.90E-31
THYMTSGUBA52MAD1L10.820877675.64E-31
THYMTSGUBA52ZNF6680.8305294662.76E-32
THYMTSGUBA52IRF30.8400354411.17E-33
THYMTSGUBA52NPRL20.8430925914.03E-34
THYMTSGUBA52PIN10.8493318454.30E-35
THYMTSGUBA52PFN10.8502287233.09E-35
THYMTSGUBA52PARK70.8517533841.75E-35
THYMTSGUBA52GABARAP0.8671930253.86E-38
THYMTSGUBA52GADD45GIP10.8824400594.11E-41
THYMTSGUBA52SIRT60.8844092671.58E-41
THYMTSGUBA52GLTSCR20.8913382214.80E-43
THYMTSGUBA52GNB2L10.8991355856.99E-45
THYMTSGUBA52TSSC40.9173382257.92E-50
THYMTSGUBA52BRMS10.9266966167.77E-53
UCSCell metabolism geneUBA52LCMT10.8021948841.20E-28
UCSCell metabolism geneUBA52SNRPD10.8023487121.15E-28
UCSCell metabolism geneUBA52ALG30.8032398519.00E-29
UCSCell metabolism geneUBA52SLC25A110.8054191294.95E-29
UCSCell metabolism geneUBA52PSMA50.805658244.63E-29
UCSCell metabolism geneUBA52PTGES20.8060837284.11E-29
UCSCell metabolism geneUBA52GCDH0.8132433585.41E-30
UCSCell metabolism geneUBA52UROS0.814534923.72E-30
UCSCell metabolism geneUBA52GFER0.814620373.63E-30
UCSCell metabolism geneUBA52IDH3B0.8152535293.01E-30
UCSCell metabolism geneUBA52PSMA40.8158830752.51E-30
UCSCell metabolism geneUBA52TALDO10.8224347223.51E-31
UCSCell metabolism geneUBA52SNRPB0.8234606212.56E-31
UCSCell metabolism geneUBA52DGUOK0.824364521.94E-31
UCSCell metabolism geneUBA52DHRS4L20.8264853219.99E-32
UCSCell metabolism geneUBA52SNRPE0.8270827088.28E-32
UCSCell metabolism geneUBA52POLD40.827490057.28E-32
UCSCell metabolism geneUBA52PAFAH1B30.8276194766.99E-32
UCSCell metabolism geneUBA52DHRS40.8281092995.98E-32
UCSCell metabolism geneUBA52MTX10.829753823.54E-32
UCSCell metabolism geneUBA52HMBS0.8297719853.52E-32
UCSCell metabolism geneUBA52HMOX20.8301787073.09E-32
UCSCell metabolism geneUBA52MTMR140.8305171132.77E-32
UCSCell metabolism geneUBA52SRM0.8308445952.49E-32
UCSCell metabolism geneUBA52SNRPD30.8322151851.60E-32
UCSCell metabolism geneUBA52SMPD20.8336970869.83E-33
UCSCell metabolism geneUBA52WBSCR220.8343670297.88E-33
UCSCell metabolism geneUBA52GALK10.834974236.44E-33
UCSCell metabolism geneUBA52OAZ10.8351835696.01E-33
UCSCell metabolism geneUBA52POLE40.8360260264.54E-33
UCSCell metabolism geneUBA52PSME20.8372403453.02E-33
UCSCell metabolism geneUBA52PSMC50.8375497792.72E-33
UCSCell metabolism geneUBA52PMPCA0.8402828741.07E-33
UCSCell metabolism geneUBA52EXOSC50.8415935876.81E-34
UCSCell metabolism geneUBA52DTYMK0.8434698713.53E-34
UCSCell metabolism geneUBA52TOMM400.8436031063.37E-34
UCSCell metabolism geneUBA52TBCB0.8439189933.01E-34
UCSCell metabolism geneUBA52PSMD80.8457445321.58E-34
UCSCell metabolism geneUBA52PSMB100.8458696391.51E-34
UCSCell metabolism geneUBA52UROD0.8459579481.46E-34
UCSCell metabolism geneUBA52PSME10.8469997451.00E-34
UCSCell metabolism geneUBA52TIMM17B0.8481301856.67E-35
UCSCell metabolism geneUBA52TIMM100.8496876863.77E-35
UCSCell metabolism geneUBA52PGP0.8510794812.25E-35
UCSCell metabolism geneUBA52PSMC10.8528760691.15E-35
UCSCell metabolism geneUBA52GEMIN70.8532312841.01E-35
UCSCell metabolism geneUBA52IDH3G0.8543578466.57E-36
UCSCell metabolism geneUBA52PSMB60.8558529633.70E-36
UCSCell metabolism geneUBA52SEC61G0.8566060272.77E-36
UCSCell metabolism geneUBA52ITPA0.8567954582.57E-36
UCSCell metabolism geneUBA52NANS0.8598646427.72E-37
UCSCell metabolism geneUBA52PHKG20.860470686.06E-37
UCSCell metabolism geneUBA52FPGS0.8606604365.62E-37
UCSCell metabolism geneUBA52HSD17B100.8609101075.09E-37
UCSCell metabolism geneUBA52DPM30.8612605714.42E-37
UCSCell metabolism geneUBA52LSM30.8634604291.81E-37
UCSCell metabolism geneUBA52POLD20.8638372081.56E-37
UCSCell metabolism geneUBA52POLR2J0.8668090544.54E-38
UCSCell metabolism geneUBA52EBP0.8674607243.45E-38
UCSCell metabolism geneUBA52PSMD40.8680509662.69E-38
UCSCell metabolism geneUBA52GMPPA0.8699953361.17E-38
UCSCell metabolism geneUBA52LSM40.8701355111.10E-38
UCSCell metabolism geneUBA52PSMB10.8744654541.65E-39
UCSCell metabolism geneUBA52TOMM220.8809976498.17E-41
UCSCell metabolism geneUBA52PSMD130.8819767215.13E-41
UCSCell metabolism geneUBA52POLR2F0.8822981934.40E-41
UCSCell metabolism geneUBA52POLR2H0.8828117253.44E-41
UCSCell metabolism geneUBA52MVD0.8831371482.94E-41
UCSCell metabolism geneUBA52POLR2I0.88917221.47E-42
UCSCell metabolism geneUBA52EXOSC40.8897703821.08E-42
UCSCell metabolism geneUBA52LSM20.8904389447.66E-43
UCSCell metabolism geneUBA52DPM20.8923407962.84E-43
UCSCell metabolism geneUBA52PFDN50.8925960992.48E-43
UCSCell metabolism geneUBA52TIMM8B0.8942923321.01E-43
UCSCell metabolism geneUBA52APRT0.8954443055.40E-44
UCSCell metabolism geneUBA52SSR20.8964618963.10E-44
UCSCell metabolism geneUBA52GUK10.9003238443.56E-45
UCSCell metabolism geneUBA52TIMM500.9089164882.07E-47
UCSCell metabolism geneUBA52ACOT80.909254461.67E-47
UCSCell metabolism geneUBA52PSMB30.9101690319.36E-48
UCSCell metabolism geneUBA52SLC27A50.9118249993.22E-48
UCSCell metabolism geneUBA52PSMC30.9119554772.96E-48
UCSCell metabolism geneUBA52FAU0.9160006541.99E-49
UCSCell metabolism geneUBA52PSMB70.9212307374.93E-51
UCSCell metabolism geneUBA52TIMM130.9223403712.18E-51
UCSCell metabolism geneUBA52PGLS0.9292308771.01E-53
UCSCell metabolism geneUBA52SNRPD20.9493212633.68E-62
UCSCGCUBA52ASPSCR10.8032903968.87E-29
UCSCGCUBA52MAP2K20.8214483264.74E-31
UCSCGCUBA52MGMT0.835790044.91E-33
UCSCGCUBA52RBM100.8691561.68E-38
UCSCGCUBA52SDHAF20.8765287436.50E-40
UCSCGCUBA52TFPT0.9287825851.46E-53
UCSEpifactorUBA52ACTR50.801165751.58E-28
UCSEpifactorUBA52SS18L20.8107268941.11E-29
UCSEpifactorUBA52CDK50.8122940837.12E-30
UCSEpifactorUBA52TRIM280.8184488971.17E-30
UCSEpifactorUBA52PRMT10.8318458971.80E-32
UCSEpifactorUBA52DMAP10.8366068873.74E-33
UCSEpifactorUBA52EXOSC50.8415935876.81E-34
UCSEpifactorUBA52CXXC10.8419127136.09E-34
UCSEpifactorUBA52ZGPAT0.8435012373.49E-34
UCSEpifactorUBA52INO80E0.8514891451.94E-35
UCSEpifactorUBA52NOC2L0.8540131437.49E-36
UCSEpifactorUBA52MBD30.8623357792.87E-37
UCSEpifactorUBA52CCDC1010.8643388551.27E-37
UCSEpifactorUBA52LAS1L0.8680877792.65E-38
UCSEpifactorUBA52RUVBL20.8701416151.10E-38
UCSEpifactorUBA52RRP80.8703424341.01E-38
UCSEpifactorUBA52PPP4C0.8801583281.21E-40
UCSEpifactorUBA52PAF10.8827204813.59E-41
UCSEpifactorUBA52SIRT60.8844092671.58E-41
UCSEpifactorUBA52EXOSC40.8897703821.08E-42
UCSEpifactorUBA52ZNHIT10.9008538362.63E-45
UCSEpifactorUBA52C17orf490.9101623519.40E-48
UCSEpifactorUBA52TAF100.919482741.74E-50
UCSEpifactorUBA52BRMS10.9266966167.77E-53
UCSEpifactorUBA52TFPT0.9287825851.46E-53
UCSEpifactorUBA52PRPF310.9308888632.57E-54
UCSEpifactorUBA52FBL0.9370858731.10E-56
UCSIUPHARUBA52ATG4B0.8027289831.03E-28
UCSIUPHARUBA52SLC25A110.8054191294.95E-29
UCSIUPHARUBA52PTGES20.8060837284.11E-29
UCSIUPHARUBA52CDK50.8122940837.12E-30
UCSIUPHARUBA52SLC39A30.8153735162.91E-30
UCSIUPHARUBA52TRIM280.8184488971.17E-30
UCSIUPHARUBA52TWF20.8202511936.82E-31
UCSIUPHARUBA52MAP2K20.8214483264.74E-31
UCSIUPHARUBA52PPIA0.8244217331.90E-31
UCSIUPHARUBA52HMOX20.8301787073.09E-32
UCSIUPHARUBA52PRMT10.8318458971.80E-32
UCSIUPHARUBA52SMPD20.8336970869.83E-33
UCSIUPHARUBA52MMP240.8376519012.63E-33
UCSIUPHARUBA52PSMB60.8558529633.70E-36
UCSIUPHARUBA52PHKG20.860470686.06E-37
UCSIUPHARUBA52PSMB10.8744654541.65E-39
UCSIUPHARUBA52EGLN20.8770774995.06E-40
UCSIUPHARUBA52MVD0.8831371482.94E-41
UCSIUPHARUBA52SIRT60.8844092671.58E-41
UCSIUPHARUBA52SLC27A50.9118249993.22E-48
UCSKinaseUBA52CDK50.8122940837.12E-30
UCSKinaseUBA52TRIM280.8184488971.17E-30
UCSKinaseUBA52MAP2K20.8214483264.74E-31
UCSKinaseUBA52ADCK40.8257360811.26E-31
UCSKinaseUBA52PHKG20.860470686.06E-37
UCSTFUBA52ZNF6530.8014657231.46E-28
UCSTFUBA52ZBTB170.8064073053.76E-29
UCSTFUBA52AKAP8L0.8074049132.85E-29
UCSTFUBA52USF20.8168258451.90E-30
UCSTFUBA52THAP70.8182924981.23E-30
UCSTFUBA52ETV20.8245550571.83E-31
UCSTFUBA52ZNF6680.8305294662.76E-32
UCSTFUBA52ZNF320.8363989884.01E-33
UCSTFUBA52USF10.8381953942.19E-33
UCSTFUBA52REXO40.8389714641.68E-33
UCSTFUBA52IRF30.8400354411.17E-33
UCSTFUBA52ZNF4440.8407317319.17E-34
UCSTFUBA52SNAPC20.8410946078.09E-34
UCSTFUBA52CXXC10.8419127136.09E-34
UCSTFUBA52ZGPAT0.8435012373.49E-34
UCSTFUBA52ZNF5240.8453605381.81E-34
UCSTFUBA52PIN10.8493318454.30E-35
UCSTFUBA52RBCK10.8513749872.02E-35
UCSTFUBA52DRAP10.8591869231.01E-36
UCSTFUBA52THAP30.8598390977.80E-37
UCSTFUBA52ZNF6880.8599897787.34E-37
UCSTFUBA52THYN10.8601783786.81E-37
UCSTFUBA52MBD30.8623357792.87E-37
UCSTFUBA52ZNF4280.8651330729.12E-38
UCSTFUBA52ZNF5810.8782558662.94E-40
UCSTFUBA52ZNF7870.8788331482.25E-40
UCSTSGUBA52HTRA20.8105631281.17E-29
UCSTSGUBA52STUB10.8162786112.23E-30
UCSTSGUBA52ST200.8166160992.02E-30
UCSTSGUBA52AIP0.8207295515.90E-31
UCSTSGUBA52MAD1L10.820877675.64E-31
UCSTSGUBA52ZNF6680.8305294662.76E-32
UCSTSGUBA52IRF30.8400354411.17E-33
UCSTSGUBA52NPRL20.8430925914.03E-34
UCSTSGUBA52PIN10.8493318454.30E-35
UCSTSGUBA52PFN10.8502287233.09E-35
UCSTSGUBA52PARK70.8517533841.75E-35
UCSTSGUBA52GABARAP0.8671930253.86E-38
UCSTSGUBA52GADD45GIP10.8824400594.11E-41
UCSTSGUBA52SIRT60.8844092671.58E-41
UCSTSGUBA52GLTSCR20.8913382214.80E-43
UCSTSGUBA52GNB2L10.8991355856.99E-45
UCSTSGUBA52TSSC40.9173382257.92E-50
UCSTSGUBA52BRMS10.9266966167.77E-53
UVMCell metabolism geneUBA52PIK3R20.8026410173.49E-19
UVMCell metabolism geneUBA52LCMT10.8048681082.34E-19
UVMCell metabolism geneUBA52IMPDH20.8099926649.22E-20
UVMCell metabolism geneUBA52POLD20.8116356156.79E-20
UVMCell metabolism geneUBA52PGLS0.8143107684.11E-20
UVMCell metabolism geneUBA52DOHH0.8198963581.40E-20
UVMCell metabolism geneUBA52MPST0.8369139454.10E-22
UVMCell metabolism geneUBA52FAU0.8599007051.73E-24
UVMCell metabolism geneUBA52SSR20.8623907529.06E-25
UVMCell metabolism geneUBA52PRKCSH0.9008413685.42E-30
UVMCGCUBA52TRAF70.905151361.04E-30
UVMEpifactorUBA52TADA30.8071834531.54E-19
UVMEpifactorUBA52FBL0.8745545533.12E-26
UVMEpifactorUBA52TRIM280.9135223393.34E-32
UVMIUPHARUBA52PIK3R20.8026410173.49E-19
UVMIUPHARUBA52NR1H20.8093140051.04E-19
UVMIUPHARUBA52IMPDH20.8099926649.22E-20
UVMIUPHARUBA52MPST0.8369139454.10E-22
UVMIUPHARUBA52MAP3K110.8448999346.80E-23
UVMIUPHARUBA52TRIM280.9135223393.34E-32
UVMKinaseUBA52MAP3K110.8448999346.80E-23
UVMKinaseUBA52TRIM280.9135223393.34E-32
UVMTFUBA52ZNF5790.8015439974.23E-19
UVMTFUBA52ZNF2050.8049517272.31E-19
UVMTFUBA52NR1H20.8093140051.04E-19
UVMTFUBA52ZNF6280.8181853991.95E-20
UVMTFUBA52USF20.8354839115.61E-22
UVMTFUBA52ZNF7870.8380386183.21E-22
UVMTFUBA52ZNF3580.8393341312.40E-22
UVMTFUBA52FIZ10.8458365115.47E-23
UVMTFUBA52ZNF5240.8593621271.99E-24
UVMTFUBA52ZNF5810.8894665383.00E-28
UVMTSGUBA52STUB10.8159955762.98E-20
UVMTSGUBA52GNB2L10.8228166577.84E-21
UVMTSGUBA52GABARAP0.8232064277.25E-21


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Protein structure


check button Protein 3D structure
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Protein-Protein Interaction


check button Protein-protein interaction networks
* Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure

check buttonOverlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure
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* Edge colors based on TCGA cancer types.

check button* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P))
all structure
Cancer typeTranslation factorInteracting protein coding geneFCadj.pval
KIRPUBA52RPL18A-1.516513928088850.00016188295558095
KICHUBA52RPS27A1.753966937859560.000187873840332031
KIRPUBA52RPS16-1.359570436175170.00019507110118866
COADUBA52RPS31.487303751430140.000411599874496461
KIRPUBA52RPS11-1.018615705651030.00105937570333481
LIHCUBA52RPL8-4.845882849745580.00110314154326131
PRADUBA52RPL18A1.406001757484990.00205137828390396
KICHUBA52RPL191.369011828940890.00250792503356934
KICHUBA52RPS121.269973817584310.00308787822723389
LUADUBA52RPL19-1.313980266157250.00993159558412698
THCAUBA52RPS16-6.163227981565770.0115764821363307
BLCAUBA52RPS12-1.478046734404210.0204124450683594
BLCAUBA52RPS27A-1.047474700691880.0258216857910156
HNSCUBA52RPS3-4.735058190951350.0273726439852453
COADUBA52RPS111.353075489982040.0312207043170929
LUSCUBA52RPL19-2.146698895166660.044366810398747
KIRCUBA52RPL19-2.734852712766761.33980982873695e-10
BRCAUBA52RPS12-4.912393274782441.85340619742495e-09
KIRPUBA52RPL37-1.174216219471392.26888805627823e-05
KIRCUBA52RPL35-1.064752380593922.72286325678163e-08
KIRCUBA52RPL8-1.182524599717735.64962994208288e-07
KIRPUBA52RPL8-1.530036923501196.0301274061203e-05
KIRCUBA52RPS16-1.661498698893847.8509870430991e-09
BRCAUBA52RPS27A-4.285121482004247.8788217967112e-14
KIRCUBA52RPL37-2.871988220584648.03913394748564e-12
KIRPUBA52RPL35-1.529811019754969.0546440333128e-05
KIRCUBA52RPS3-1.295608479263879.05905681935088e-10
KIRCUBA52RPL18A-4.430793049608439.2516163152192e-11


check button Protein-protein interactors with this translation factor (BIOGRID-3.4.160)
PPI interactors with UBA52
GRB2, DAZAP2, MAPK6, NCK1, RAD21, HDGF, ARRB1, ARRB2, RPS3, RPLP2, RPS21, UBE2A, PSMB2, UBE2B, VDAC2, USP9X, VDAC3, VDAC1, HNRNPA2B1, UNK, SSSCA1, AHCYL1, S100A16, ZRANB2, ZFYVE19, ZSCAN18, VAMP2, TPI1, CLNS1A, UFM1, UFC1, CFL1, LAPTM5, SMAD2, RNF11, UBL4A, ITGA4, FBXO6, SMURF2, Uch, YUH1, UBP2, UBP3, UBP6, UBP11, UBP15, USP7, USP46, KLK3, RAB2A, RPL13, RPL35, RPL35A, RPL4, RPS4X, HSP90AB1, PES1, RPL17, RPL18A, RPL24, RPL27A, RPL32, RPL34, RPL36, RPL37, RPS14, RPS15A, RPS19, RPS2, RPS20, RPS25, RPS27A, RPS5, RPS7, RPS8, gag, HNRNPU, Cdc6, Mcm3, MCM2, MCM5, EIF2S2, CDC73, ZNRF4, SLC13A2, EIF2B2, DKK3, PNPLA5, NAA40, KLRG2, PLA2G10, GCNT1, ST8SIA3, WBP2, FBXO7, MTCH2, ADRM1, PSMD4, NEDD8, UBA52, HAVCR1, CALCOCO2, ZUFSP, HEXIM1, MEPCE, LARP7, SENP2, RECQL4, VCP, HDAC2, PSMD14, LUCAT1, MDM2, ARAF, FAM168A, EPN2, DESI1, TAX1BP1, ARRDC3, PLSCR4, PLEKHB2, UBQLN1, RABGEF1, RAD23A, MTURN, UBQLN2, LITAF, PLEKHA4, MIB1, CCNB1, AKT1, BRAF, GRB10, PRKCB, SMKR1, NEXN-AS1, KCNK3, CD4, HIST1H1E, HIST2H2BF, REXO1, ACER1, DNAH5, SPOCK2, HIST1H2AH, DENND2D, CD207, SHANK1, SRGAP2, SLU7, PF4V1, NAP1L1, EMX2, CRMP1, HIST2H2BE, PHF3, NLRP1, MAGIX, HIST1H2AB, HIST1H4A, TBC1D4, LOC102724334, HIST3H3, HIST1H2BH, E, nsp4, Arhgap30, VAV3, INS, NDN, RBM39, IFI16, TXNIP, NEIL3, NUP37, SMARCAL1, HOXA5, CIAO1, SPOP, PARK2, TP53, ACBD5, ARF6, B3GAT1, C11orf52, CAV1, CXADR, EBAG9, ELOVL5, FLOT1, GJA1, GJD3, HSD17B11, HSD3B7, KRAS, LAMP1, LAMTOR1, LYN, METTL7A, OCLN, PANX1, PEX14, PXMP2, RAB35, RAB5C, RHOB, SEC61B, STX4, STX7, ZFPL1, NUDCD2, TRIM28, CHRNB4, PDDC1, CCNT2, MT1M, FBLN2, RNH1, CHCHD4, UBE2O, C18orf25, RNF216P1, SPIN2A, SLC43A3, PPP1R12A, SMYD5, DGCR2, NOTCH2, UBB, FUOM, KLK1, HMGCS1, NPEPPS, MTMR4, CYP17A1, MMAB, PTH2R, FST, CTAG1B, MTHFR, PPP1R13B, DCAF16, CLSTN1, RGS20, PTX3, FLAD1, CCNT1, TMEM141, CYTH1, STK17B, NEXN, SPRTN, USP11, SEC23B, Ube2i, APOBEC3B, CCNF, HECTD1, SLFN11, nsp14, NR3C1,


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Mutations


check button Clinically associated variants from ClinVar.
GeneChrPositionRefSeqVarSeqRefSeeqVarTypePathogenicDiseaseVarInfo


check button nsSNVs with sample frequency (size of circle) from TCGA 33 cancers.
all structure


check button SNVs and Indels
GeneCancer typeChromosomeStartEndRefSeeqMutSeqMutation typeAAchange# samples
UBA52BLCAchr191868410218684102GASplice_Site5
UBA52KIRPchr191868575718685757ATMissense_Mutationp.N90Y4
UBA52BLCAchr191868453818684538CTMissense_Mutationp.S57L3
UBA52BLCAchr191868453818684538CTMissense_Mutation3
UBA52UCECchr191868449218684492CGMissense_Mutationp.R42G3
UBA52SKCMchr191868573518685735CTSilentp.L82L2
UBA52BLCAchr191868418018684180GCMissense_Mutationp.E24Q2
UBA52HNSCchr191868414718684147AGMissense_Mutationp.I13V2
UBA52BLCAchr191868453818684538CGNonsense_Mutationp.S57*2
UBA52HNSCchr191868594318685945AAG-In_Frame_Delp.K126del2
UBA52BRCAchr191868588318685883CTMissense_Mutationp.H104Y2
UBA52BLCAchr191868418018684180GCMissense_Mutation2
UBA52BLCAchr191868418818684188CGSilentp.V26V2
UBA52HNSCchr191868587118685871TCMissense_Mutationp.Y100H1
UBA52SKCMchr191868415818684158GASilentp.E16E1
UBA52BLCAchr191868414918684149CTSilent1
UBA52SKCMchr191868447618684476CTSilentp.I36I1
UBA52BLCAchr191868577118685771GAMissense_Mutationp.M94I1
UBA52BLCAchr191868418818684188CGSilent1
UBA52STADchr191868419818684198ATMissense_Mutationp.I30F1
UBA52KIRPchr191868571018685710GTMissense_Mutation1
UBA52STADchr191868454418684546ACA-In_Frame_Delp.Y59del1
UBA52COADchr191868413218684132CAMissense_Mutationp.L8I1
UBA52LIHCchr191868588818685888TCSilent1
UBA52GBMchr191868412318684123GCMissense_Mutationp.V5L1
UBA52LIHCchr191868455218684552CTNonsense_Mutationp.Q62X1
UBA52GBMchr191868450518684505CTMissense_Mutationp.A46V1
UBA52LIHCchr191868574818685748CTMissense_Mutation1
UBA52BLCAchr191868577118685771GAMissense_Mutation1
UBA52GBMchr191868569618685696GTSilent1
UBA52LUADchr191868413918684139GAMissense_Mutationp.G10D1
UBA52BLCAchr191868414918684149CTSilentp.I13I1
UBA52HNSCchr191868414718684147AGMissense_Mutation1
UBA52OVchr191854552918545529GAMissense_Mutationp.R54H1
UBA52HNSCchr191868587118685871TCMissense_Mutation1
UBA52SARCchr191868448818684488GTMissense_Mutation1

check buttonCopy number variation (CNV) of UBA52
* Click on the image to open the original image in a new window.
all structure

check buttonFusion gene breakpoints (product of the structural variants (SVs)) across UBA52
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


check button Fusion genes with this translation factor from FusionGDB2.0.
FusionGDB2 IDDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
98996BRCATCGA-V7-A7HQAKAP8chr1915490523-UBA52chr1918684102+
98996STADTCGA-VQ-A8PEARMC6chr1919144739+UBA52chr1918684102+
98996STADTCGA-VQ-A8PE-01AARMC6chr1919144739+UBA52chr1918684103+
98996STADTCGA-VQ-A8PE-01AARMC6chr1919144822+UBA52chr1918684103+
98996STADTCGA-VQ-A8PE-01AARMC6chr1919145047+UBA52chr1918684103+
98996N/AAA559308CDKN2B-AS1chr922012616+UBA52chr1918686024-
98996UCECTCGA-AX-A06B-01AGATAD2Achr1919576423+UBA52chr1918684472+
98996N/AAA654381GPC6chr1394015381+UBA52chr1918686039-
98996BRCATCGA-E2-A14ZKDM4Bchr195082515+UBA52chr1918684102+
98996BRCATCGA-E2-A14Z-01AKDM4Bchr195082515+UBA52chr1918684103+
98996N/ABP429633KXD1chr1918680191+UBA52chr1918680682+
98996N/AAA581992PSMA7chr2060711972+UBA52chr1918682669+
98996N/AAA165052RAPGEF5chr722291385-UBA52chr1918686040-
98996N/ABG231044S100Zchr576147412-UBA52chr1918686051-
98996N/AAA650212TCF15chr20587460-UBA52chr1918686051-
101271N/ABC019044UBA52chr1918684102-ACTG1chr1779479810-
95860LUADTCGA-55-1596-01AUBA52chr1918684558+CACNA1Cchr122721069+
95860N/AAA368309UBA52chr1918684186+CSH1chr1761972973+
95860N/AEC562692UBA52chr1918686047+DOCK5chr825248365-
95860N/ABM013913UBA52chr1918686051+DPM1chr2049560295-
95860N/AAA329258UBA52chr1918686037+DZIP1Lchr3137795142-
95860N/ABG878329UBA52chr1918685720-IGKCchr289157002-
95860N/ABG577288UBA52chr1918686051+KCNAB1chr3156222559-
101969BRCATCGA-AO-A129-01AUBA52chr1918684558+KXD1chr1918672846+
103173N/ABF338312UBA52chr1918686051+MED15chr2220920337-
95860N/AAA308485UBA52chr1918686044+MFAP1chr1544103726-
95860N/AEY123292UBA52chr1918686047+MGLLchr3127546120-
102925N/AAF348700UBA52chr1918686048+MYEOVchr1169070734-
97145N/ABQ016698UBA52chr1918684523-MYH11chr1615797723-
95860N/AX56998UBA52chr1918686044+NDUFAF5chr2013788162-
95860N/ABQ360139UBA52chr1918684484-NUDCchr127272090+
100374N/ADN997189UBA52chr1918686051+PTPRDchr98336626+
95860N/AAA551416UBA52chr1918686051+RASSF4chr1045483347-
95860N/ABI494570UBA52chr1918686051+S100Zchr576147412+
101024N/ACF124214UBA52chr1918686039+SLC9A8chr2048493662+
98951N/ABF082819UBA52chr1918685867-SPTAN1chr9131353865+
98596N/ABP212026UBA52chr1918685944+SUGP2chr1919103589-
95860N/ABE070452UBA52chr1918684189-TM4SF1chr3149095258-
98996N/AAW023581UBA52chr1918684131-UBA52chr1918684179+
98996N/AAW270263UBA52chr1918685884-UBA52chr1918685951+
95860N/AAA304512UBA52chr1918684558+UBBP4chr1721731098+
102850Non-CancerTCGA-FU-A3EO-11AUBA52chr1918685753+UBCchr12125398143-
102850Non-CancerTCGA-FU-A3EO-11AUBA52chr1918685759+UBCchr12125398137-
102850N/AAA533549UBA52chr1918684558+UBCchr12125398176-
102850N/AAI547172UBA52chr1918684558+UBCchr12125397453-
102850N/AN85706UBA52chr1918684558+UBCchr12125397462-
96628N/ABG030044UBA52chr1918686051+UGCGchr9114689172-
95860N/ABG482364UBA52chr1918685733-VPS28chr8145649367-
95860BLCATCGA-FD-A6TGUBA52chr1918682719+ZNF85chr1921131549+
95860BLCATCGA-FD-A6TGUBA52chr1918682719+ZNF92chr764863253+
98996KIRCTCGA-DV-5567-01AUBCchr12125398114-UBA52chr1918685694+
98996N/AAA566057UBCchr12125398108-UBA52chr1918685678+
98996N/ABM016326UBCchr12125397653-UBA52chr1918684123+
98996N/AEC536121UBCchr12125396512-UBA52chr1918685678+
98996N/AAA886845UBE2L3chr2221923685-UBA52chr1918686051-
98996UCECTCGA-DF-A2L0-01AWDR45Bchr1780601825-UBA52chr1918684103+


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Prognostic Analysis


check button Kaplan-Meier plots with logrank tests of overall survival (OS)
all structure
Cancer typeTranslation factorCoefficentHazard ratioWald test pvalLikelihool ratio pvalLogrank test pval# samples


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Translation factor and Gender


check button Differential gene expression between female and male. (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
KIRCUBA520.001269291226608280.036
SARCUBA520.01813042732328780.49
TGCTUBA520.02395348897665640.62

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Translation factor and Age


check button Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
LUSCUBA520.04334475349347251
PAADUBA520.04054877427806261
THYMUBA520.04346726262295441
SARCUBA520.02003487048653380.66

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Related Drugs


check button Drugs targeting genes involved in this translation factor.
(DrugBank Version 5.1.8 2021-05-08)
UniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases


check button Diseases associated with this translation factor.
(DisGeNet 4.0)
Disease IDDisease Name# PubMedsDisease source