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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:CDK5RAP1-CDH4 (FusionGDB2 ID:HG51654TG1002) |
Fusion Gene Summary for CDK5RAP1-CDH4 |
Fusion gene summary |
Fusion gene information | Fusion gene name: CDK5RAP1-CDH4 | Fusion gene ID: hg51654tg1002 | Hgene | Tgene | Gene symbol | CDK5RAP1 | CDH4 | Gene ID | 51654 | 1002 |
Gene name | CDK5 regulatory subunit associated protein 1 | cadherin 4 | |
Synonyms | C20orf34|C42|CGI-05|HSPC167 | CAD4|R-CAD|RCAD | |
Cytomap | ('CDK5RAP1')('CDH4') 20q11.21 | 20q13.33 | |
Type of gene | protein-coding | protein-coding | |
Description | CDK5 regulatory subunit-associated protein 1CDK5 activator-binding protein C42 | cadherin-4R-cadherincadherin 4, type 1, R-cadherin (retinal)cadherin 4, type 1, preproproteinretinal cadherin | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | P55283 | |
Ensembl transtripts involved in fusion gene | ENST00000477105, ENST00000473997, ENST00000346416, ENST00000357886, ENST00000544843, ENST00000339269, | ||
Fusion gene scores | * DoF score | 7 X 6 X 5=210 | 16 X 14 X 7=1568 |
# samples | 7 | 21 | |
** MAII score | log2(7/210*10)=-1.58496250072116 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(21/1568*10)=-2.90046432644909 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: CDK5RAP1 [Title/Abstract] AND CDH4 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | CDK5RAP1(31967267)-CDH4(60503248), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | CDK5RAP1-CDH4 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. CDK5RAP1-CDH4 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. CDK5RAP1-CDH4 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. CDK5RAP1-CDH4 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. CDK5RAP1-CDH4 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. CDK5RAP1-CDH4 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. CDK5RAP1-CDH4 seems lost the major protein functional domain in Tgene partner, which is a tumor suppressor due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | CDK5RAP1 | GO:0045736 | negative regulation of cyclin-dependent protein serine/threonine kinase activity | 11882646 |
Fusion gene breakpoints across CDK5RAP1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across CDH4 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | LUAD | TCGA-75-6211-01A | CDK5RAP1 | chr20 | 31967267 | - | CDH4 | chr20 | 60503248 | + |
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Fusion Gene ORF analysis for CDK5RAP1-CDH4 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5UTR-3CDS | ENST00000477105 | ENST00000360469 | CDK5RAP1 | chr20 | 31967267 | - | CDH4 | chr20 | 60503248 | + |
5UTR-3CDS | ENST00000477105 | ENST00000543233 | CDK5RAP1 | chr20 | 31967267 | - | CDH4 | chr20 | 60503248 | + |
Frame-shift | ENST00000473997 | ENST00000360469 | CDK5RAP1 | chr20 | 31967267 | - | CDH4 | chr20 | 60503248 | + |
Frame-shift | ENST00000473997 | ENST00000543233 | CDK5RAP1 | chr20 | 31967267 | - | CDH4 | chr20 | 60503248 | + |
In-frame | ENST00000346416 | ENST00000360469 | CDK5RAP1 | chr20 | 31967267 | - | CDH4 | chr20 | 60503248 | + |
In-frame | ENST00000346416 | ENST00000543233 | CDK5RAP1 | chr20 | 31967267 | - | CDH4 | chr20 | 60503248 | + |
In-frame | ENST00000357886 | ENST00000360469 | CDK5RAP1 | chr20 | 31967267 | - | CDH4 | chr20 | 60503248 | + |
In-frame | ENST00000357886 | ENST00000543233 | CDK5RAP1 | chr20 | 31967267 | - | CDH4 | chr20 | 60503248 | + |
In-frame | ENST00000544843 | ENST00000360469 | CDK5RAP1 | chr20 | 31967267 | - | CDH4 | chr20 | 60503248 | + |
In-frame | ENST00000544843 | ENST00000543233 | CDK5RAP1 | chr20 | 31967267 | - | CDH4 | chr20 | 60503248 | + |
intron-3CDS | ENST00000339269 | ENST00000360469 | CDK5RAP1 | chr20 | 31967267 | - | CDH4 | chr20 | 60503248 | + |
intron-3CDS | ENST00000339269 | ENST00000543233 | CDK5RAP1 | chr20 | 31967267 | - | CDH4 | chr20 | 60503248 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000346416 | CDK5RAP1 | chr20 | 31967267 | - | ENST00000360469 | CDH4 | chr20 | 60503248 | + | 5913 | 1261 | 142 | 1374 | 410 |
ENST00000346416 | CDK5RAP1 | chr20 | 31967267 | - | ENST00000543233 | CDH4 | chr20 | 60503248 | + | 2547 | 1261 | 142 | 1374 | 410 |
ENST00000357886 | CDK5RAP1 | chr20 | 31967267 | - | ENST00000360469 | CDH4 | chr20 | 60503248 | + | 5955 | 1303 | 142 | 1416 | 424 |
ENST00000357886 | CDK5RAP1 | chr20 | 31967267 | - | ENST00000543233 | CDH4 | chr20 | 60503248 | + | 2589 | 1303 | 142 | 1416 | 424 |
ENST00000544843 | CDK5RAP1 | chr20 | 31967267 | - | ENST00000360469 | CDH4 | chr20 | 60503248 | + | 5871 | 1219 | 100 | 1332 | 410 |
ENST00000544843 | CDK5RAP1 | chr20 | 31967267 | - | ENST00000543233 | CDH4 | chr20 | 60503248 | + | 2505 | 1219 | 100 | 1332 | 410 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000346416 | ENST00000360469 | CDK5RAP1 | chr20 | 31967267 | - | CDH4 | chr20 | 60503248 | + | 0.052875645 | 0.9471243 |
ENST00000346416 | ENST00000543233 | CDK5RAP1 | chr20 | 31967267 | - | CDH4 | chr20 | 60503248 | + | 0.03364042 | 0.96635956 |
ENST00000357886 | ENST00000360469 | CDK5RAP1 | chr20 | 31967267 | - | CDH4 | chr20 | 60503248 | + | 0.059140902 | 0.94085914 |
ENST00000357886 | ENST00000543233 | CDK5RAP1 | chr20 | 31967267 | - | CDH4 | chr20 | 60503248 | + | 0.04539193 | 0.9546081 |
ENST00000544843 | ENST00000360469 | CDK5RAP1 | chr20 | 31967267 | - | CDH4 | chr20 | 60503248 | + | 0.052740455 | 0.9472595 |
ENST00000544843 | ENST00000543233 | CDK5RAP1 | chr20 | 31967267 | - | CDH4 | chr20 | 60503248 | + | 0.03757315 | 0.9624269 |
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Fusion Genomic Features for CDK5RAP1-CDH4 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
CDK5RAP1 | chr20 | 31967266 | - | CDH4 | chr20 | 60503247 | + | 6.64E-16 | 1 |
CDK5RAP1 | chr20 | 31967266 | - | CDH4 | chr20 | 60503247 | + | 6.64E-16 | 1 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for CDK5RAP1-CDH4 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr20:31967267/chr20:60503248) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | CDH4 |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types. May play an important role in retinal development. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CDK5RAP1 | chr20:31967267 | chr20:60503248 | ENST00000346416 | - | 8 | 14 | 100_220 | 369 | 588.0 | Domain | MTTase N-terminal |
Hgene | CDK5RAP1 | chr20:31967267 | chr20:60503248 | ENST00000357886 | - | 9 | 15 | 100_220 | 383 | 602.0 | Domain | MTTase N-terminal |
Hgene | CDK5RAP1 | chr20:31967267 | chr20:60503248 | ENST00000544843 | - | 8 | 12 | 100_220 | 369 | 427.6666666666667 | Domain | MTTase N-terminal |
Tgene | CDH4 | chr20:31967267 | chr20:60503248 | ENST00000360469 | 10 | 16 | 873_888 | 590 | 917.0 | Compositional bias | Note=Ser-rich | |
Tgene | CDH4 | chr20:31967267 | chr20:60503248 | ENST00000543233 | 9 | 15 | 873_888 | 516 | 843.0 | Compositional bias | Note=Ser-rich | |
Tgene | CDH4 | chr20:31967267 | chr20:60503248 | ENST00000360469 | 10 | 16 | 614_724 | 590 | 917.0 | Domain | Cadherin 5 | |
Tgene | CDH4 | chr20:31967267 | chr20:60503248 | ENST00000543233 | 9 | 15 | 614_724 | 516 | 843.0 | Domain | Cadherin 5 | |
Tgene | CDH4 | chr20:31967267 | chr20:60503248 | ENST00000360469 | 10 | 16 | 757_916 | 590 | 917.0 | Topological domain | Cytoplasmic | |
Tgene | CDH4 | chr20:31967267 | chr20:60503248 | ENST00000543233 | 9 | 15 | 757_916 | 516 | 843.0 | Topological domain | Cytoplasmic | |
Tgene | CDH4 | chr20:31967267 | chr20:60503248 | ENST00000360469 | 10 | 16 | 735_756 | 590 | 917.0 | Transmembrane | Helical | |
Tgene | CDH4 | chr20:31967267 | chr20:60503248 | ENST00000543233 | 9 | 15 | 735_756 | 516 | 843.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CDK5RAP1 | chr20:31967267 | chr20:60503248 | ENST00000339269 | - | 1 | 13 | 100_220 | 0 | 511.0 | Domain | MTTase N-terminal |
Hgene | CDK5RAP1 | chr20:31967267 | chr20:60503248 | ENST00000339269 | - | 1 | 13 | 244_512 | 0 | 511.0 | Domain | Radical SAM core |
Hgene | CDK5RAP1 | chr20:31967267 | chr20:60503248 | ENST00000339269 | - | 1 | 13 | 515_590 | 0 | 511.0 | Domain | TRAM |
Hgene | CDK5RAP1 | chr20:31967267 | chr20:60503248 | ENST00000346416 | - | 8 | 14 | 244_512 | 369 | 588.0 | Domain | Radical SAM core |
Hgene | CDK5RAP1 | chr20:31967267 | chr20:60503248 | ENST00000346416 | - | 8 | 14 | 515_590 | 369 | 588.0 | Domain | TRAM |
Hgene | CDK5RAP1 | chr20:31967267 | chr20:60503248 | ENST00000357886 | - | 9 | 15 | 244_512 | 383 | 602.0 | Domain | Radical SAM core |
Hgene | CDK5RAP1 | chr20:31967267 | chr20:60503248 | ENST00000357886 | - | 9 | 15 | 515_590 | 383 | 602.0 | Domain | TRAM |
Hgene | CDK5RAP1 | chr20:31967267 | chr20:60503248 | ENST00000544843 | - | 8 | 12 | 244_512 | 369 | 427.6666666666667 | Domain | Radical SAM core |
Hgene | CDK5RAP1 | chr20:31967267 | chr20:60503248 | ENST00000544843 | - | 8 | 12 | 515_590 | 369 | 427.6666666666667 | Domain | TRAM |
Tgene | CDH4 | chr20:31967267 | chr20:60503248 | ENST00000360469 | 10 | 16 | 170_277 | 590 | 917.0 | Domain | Cadherin 1 | |
Tgene | CDH4 | chr20:31967267 | chr20:60503248 | ENST00000360469 | 10 | 16 | 278_392 | 590 | 917.0 | Domain | Cadherin 2 | |
Tgene | CDH4 | chr20:31967267 | chr20:60503248 | ENST00000360469 | 10 | 16 | 393_507 | 590 | 917.0 | Domain | Cadherin 3 | |
Tgene | CDH4 | chr20:31967267 | chr20:60503248 | ENST00000360469 | 10 | 16 | 508_613 | 590 | 917.0 | Domain | Cadherin 4 | |
Tgene | CDH4 | chr20:31967267 | chr20:60503248 | ENST00000543233 | 9 | 15 | 170_277 | 516 | 843.0 | Domain | Cadherin 1 | |
Tgene | CDH4 | chr20:31967267 | chr20:60503248 | ENST00000543233 | 9 | 15 | 278_392 | 516 | 843.0 | Domain | Cadherin 2 | |
Tgene | CDH4 | chr20:31967267 | chr20:60503248 | ENST00000543233 | 9 | 15 | 393_507 | 516 | 843.0 | Domain | Cadherin 3 | |
Tgene | CDH4 | chr20:31967267 | chr20:60503248 | ENST00000543233 | 9 | 15 | 508_613 | 516 | 843.0 | Domain | Cadherin 4 | |
Tgene | CDH4 | chr20:31967267 | chr20:60503248 | ENST00000360469 | 10 | 16 | 170_734 | 590 | 917.0 | Topological domain | Extracellular | |
Tgene | CDH4 | chr20:31967267 | chr20:60503248 | ENST00000543233 | 9 | 15 | 170_734 | 516 | 843.0 | Topological domain | Extracellular |
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Fusion Gene Sequence for CDK5RAP1-CDH4 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>15260_15260_1_CDK5RAP1-CDH4_CDK5RAP1_chr20_31967267_ENST00000346416_CDH4_chr20_60503248_ENST00000360469_length(transcript)=5913nt_BP=1261nt AGCATGACCCGGCCTGAAGTAGCGGCGGAACGGAAGTCGCTTGTGTATGAACGCAGCGGCGGACCTGTGAGGGGATCCGACTTGCCGGCA GAACTTACGCTGCGGGACCCCGGGCACTGTTGCTGCTGCGGGAGACTGTGGGCTGTTTAGTGCCATGCACCCTTTACAGTGTGTCCTCCA AGTGCAGAGGTCTCTGGGGTGGGGACCATTGGCCTCTGTGTCTTGGCTGTCGCTGAGGATGTGCAGGGCACACAGCAGTCTCTCTAGTAC CATGTGTCCCAGTCCAGAGAGGCAGGAGGATGGAGCTCGGAAGGATTTCAGCTCCAGGCTGGCTGCTGGACCGACTTTTCAACATTTTTT AAAAAGTGCCTCAGCTCCTCAGGAGAAGCTGTCTTCAGAAGTGGAAGACCCACCTCCCTATCTCATGATGGATGAACTTCTTGGAAGGCA GAGAAAAGTCTACCTCGAGACCTATGGCTGCCAGATGAATGTGAATGACACAGAGATAGCCTGGTCCATCTTACAGAAGAGTGGCTACCT GCGGACCAGTAACCTCCAAGAGGCAGATGTGATTCTCCTTGTCACATGCTCTATCAGGGAGAAGGCTGAGCAGACCATCTGGAACCGTTT ACATCAGCTTAAAGCCTTGAAGACAAGGCGGCCCCGCTCCCGGGTTCCTCTGAGGATTGGAATTCTAGGCTGCATGGCTGAGAGGTTGAA GGAGGAGATTCTCAACAGAGAGAAAATGGTAGATATTTTGGCTGGTCCTGATGCCTACCGGGACCTTCCCCGGCTGCTGGCTGTTGCTGA GTCGGGCCAGCAAGCTGCCAACGTGCTGCTCTCTCTGGACGAGACCTATGCTGATGTCATGCCAGTCCAGACAAGCGCCAGTGCCACGTC TGCCTTTGTGTCAATCATGCGAGGCTGTGACAACATGTGTAGCTACTGCATTGTTCCTTTCACCCGGGGCAGGGAGAGGAGTCGGCCTAT TGCCTCCATTCTAGAGGAAGTGAAGAAGCTTTCTGAGCAGGGGCTGAAAGAAGTGACACTTCTTGGTCAGAATGTTAATAGTTTTCGGGA CAATTCGGAGGTCCAGTTCAACAGTGCAGTGCCTACCAATCTCAGTCGTGGCTTTACCACCAACTATAAAACCAAGCAAGGAGGACTTCG TTTTGCTCATCTTCTGGATCAGGTCTCCAGAGTAGATCCTGAAATGAGGATCCGTTTTACCTCTCCCCACCCCAAGGATTTTCCTGATGA GGGATACCCCCGGCCAGCGGCACCGGGACCCTCCAGATCTATCTCATTGACATCAACGACAACGCCCCTGAGCTGCTGCCCAAGGAGGCG CAGATCTGCGAGAAGCCCAACCTGAACGCCATCAACATCACGGCGGCCGACGCTGACGTCGACCCCAACATCGGCCCCTACGTCTTCGAG CTGCCCTTTGTCCCGGCGGCCGTGCGGAAGAACTGGACCATCACCCGCCTGAACGGTGACTATGCCCAACTCAGCTTGCGCATCCTGTAC CTGGAGGCCGGGATGTATGACGTCCCCATCATCGTCACAGACTCTGGAAACCCTCCCCTGTCCAACACGTCCATCATCAAAGTCAAGGTG TGCCCATGTGATGACAACGGGGACTGCACCACCATTGGCGCAGTGGCAGCGGCTGGTCTGGGCACCGGTGCCATCGTGGCCATCCTCATC TGCATCCTCATCCTGCTGACCATGGTCCTGCTGTTTGTCATGTGGATGAAGCGGCGAGAGAAGGAGCGCCACACGAAGCAGCTGCTCATT GACCCCGAGGACGACGTCCGCGACAACATCCTCAAGTATGACGAGGAAGGCGGTGGCGAGGAGGACCAGGACTACGACCTCAGCCAGCTG CAGCAGCCGGAAGCCATGGGGCACGTGCCAAGCAAAGCCCCTGGCGTGCGTCGCGTGGATGAGCGGCCGGTGGGCGCTGAGCCCCAGTAC CCGATCAGGCCCATGGTGCCGCACCCAGGCGACATCGGTGACTTCATCAATGAGGGACTCCGCGCTGCTGACAACGACCCCACGGCACCC CCCTATGACTCCCTGCTGGTCTTCGACTACGAGGGGAGCGGCTCCACCGCAGGCTCCGTCAGCTCCCTGAACTCATCCAGTTCCGGGGAC CAAGACTACGATTACCTCAACGACTGGGGGCCCAGATTCAAGAAGCTGGCGGACATGTATGGAGGTGGTGAAGAGGATTGACTGACCTCG CATCTTCGGACCGAAGTGAGAGCCGTGCTCGGACGCCGGAGGAGCAGGACTGAGCAGAGGCGGCCGGTCTTCCCGACTCCCTGCGGCTGT GTCCTTAGTGCTGTTAGGAGGCCCCCCAATCCCCACGTTGAGCTGTCTAGCATGAGCACCCACCCCCACAGCGCCCTGCACCCGGCCGCT GCCCAGCACCGCGCTGGCTGGCACTGAAGGACAGCAAGAGGCACTCTGTCTTCACTTGAATTTCCTAGAACAGAAGCACTGTTTTTAAAA AAAAAAAAAAAAAAAGAAGAAAGAAAGAAAAAAAAAAAAAAAAGAAAGTGCCTTTTGGTATGTATCAGATTCCCTCAAACTCAGGAGTGT CTAAAGCAGACAGACCGTCCCCACCTTCCCATCCCGAGCGGCCTCCAACCCCAGCTAGTCCCAGCTCTGAAGGCATCATTCAGAAATGGG GGAGACTGTGTCTGTCTTTCTTACTTTTTTTTTGGTCTTTTATTAAGAAAAAGAAAGTGGGTGACTTGTTTGAAAACAGAGTGGGGTTCA AATCCCAGCAGCCTTTGCTGTACACAGCTGGGGGTCTCTTGAGCCTCTTGGGAGTCAAGGCCAGCTGGGAGGCTTAGCCCTTCAGCCCCA GCAGAAGGCCCTGGGGCTGGTGGGGCTCAGAATACCCCTACCTTGTGGCTGCTCCCCACCCCTCCCGGATGCTGTGAGGAGCTCAGGCAG GGGCCTGGAGGGGAACAGGGGTCATCCTGAAGGGGCTCCACCCCCAGTCAACCCAGGCCTCCCTCAGGGACACCTGTCACCCTGAGTGCC ACCAGGTCCCCTCTGCCTTTGGTCCAGAAGAGTGAGTTGTCCAAACCAGCCAGCATCTGGCTCCAGCCCTCCAACCCTGGCGACCAGACC CCATGGGGTGCCATCAACGGCCCCGCGACAGGCATCAATTCAAACCCCAGGACACTCTCGACAGCTCCAACCATCCGGAGGGCTGTGCAG ATGGCAGGAACCAAGGACCCTCCCTGGCAGCTGAAGAGGGCAGTTACGGTTGGGCGTGGTGACCAGAACACACCCAGCAGCCTGCGAAGC CTCCCCGTCCCCAGCCTGTGCTCCTGATTCCCGCCAGACGCTTGTGAGCCTGTGTGGGTGGCAGGAGGCCCCGTCTTGCCGTGCCTACCT GTCGCACAGATGCCTCTGCACGCTGCAGACGGTGCCTCTCCTCTCCTATGGACCCTCGTCGGGGGCAGGCAGCGGCCGGGTCCAAACTTG CTGCTGTCCTCGAGGCTGGCACTGCTATCTCCAGGGCTGGGTTGACTCAAGCCAGACAGGGGGAAGGAATTGGTTCTGCAGGACAGTGAG AGGGTCTGTGTCCCGGCACCCCTGGGACAGCGCTCGGCTGCCTGTGCTCACTGCATGAGAAAACTCAGAGGGTGCATTCTCCCTCTGGCA TGGCTGTGTCTGGGCGCCTTGGGCTGCGGCAGGGGGCAGGCCCCACGTGGGGAAGCCTCGTGCTTGGTCAGCTTTCTGTCTCTCCCAGGC CAGTGACAACTGGCTTCCCGAGGAAGGAGGTGAGGTACCAGGGACCCTGGGCAGGACCTGGTGTCGGGCAGGGCGGTGCCAGCACTGGGG AAGGACAGGGAGCCCTCCCGGAGCCCCACCCTGCACCTGCCACTGGGGTCAGGGAGTGTCTCGGGGTGCCTTTGGGGGCAGCATGAGCTC CACCAGGGGCCCCGGCCCCCACCTCAGCCTATGGCCCTTCCCCATGGCTAAGGTCATGCCTTTTCTGAACAGCTTTGGCCTTGAGTGCAC ACATCTGTGCCAGGCTCACGGCATGTTCCCGTTGGATGTCAGGGTCCTTGTCCAAACCAAACTCACAGCTGCCCCTGTGCAGCCTTCAGA GTTGAGCTGGGGTCTCAGTCTCCAACCTGTCCTTTCTGACCCTCCCATGGCTGCCCAGGGAGGGCGGGGTTCACTGTGCCACGTGCTGGG TGCCCCCCTCTGCAGACAGCCAGTCCAGGAGATGGACCAACAGAGGTCAAGGGGCAGCTGGCCAGGCCGCACCGGGGTCCCCGAGTTCTG AGCTGTGCTATGCAAACAAGAATGCTCCTGTGTGGGGGGGCATGGCCGTTGGAGGTATAGCTGGGCGGGTAGTGGAAGGACTGGAAATCT CTGTTGTTGTTTGGGGAAGTCCATGCTTCAGTCCTTCGGAGTATGCGTGGATTGTTCGAAGTGTGACTATGGCCCGGGAGCCAGGGCAGC ATGAACTCCTTTCTCTGAAATTTCGAGGCCTCCTTGGGTTCCCTGAACTCCGGGCTGATGTTCCCAGGACCCAGCACCAGGAGACCCCAG TCCCGCCAGCAGCCGCCGCTACCCAGGAGGGCTGGGCGACATTGGCCGCCTCCCACTAGCTCCCCCTCCTCGCCCACAGCCTCTTGTCAC TGCCAAGCCCCCGTTCCTTTTGCCCAAATCACGCAGGCGGAAGCTGCAGTGCCAGCTGGAGGGATGTTCATAGGGCTTCCTGTGCCCATC CCTGCTCCAAACAGCTGGACAGCTTCCCCTCTACCCCCACCCTGGTGAGCCCCTGGGGGCCAGAGAAAGATGGGGTTCCTGCACCTTCCC AGCTCCACCTCTGAACTTGAGTTAGCGTTAGCTAAGCATACAATCAGTGTCGAACGTCTCTCTTCCTTAAGCTTGTAGATACGACTGCCT ATAATCAGGGGACTCCCACTGGAGGCCGGGAGGCCAATGCTGGCCAGGTGCGAGGGCATGGTTTGGTTCCTTTAGGGAATTTTTGTTTTG CAAACAGGAGAAACCTGTGCTGCAGGTTGGAGTGGCAGGAACGACTGGCCTTGGTCAGCAGGCAGCCCCCAGCCTAGGGCCACAGTCCTC TTCAGGGCCTGGGCAGCCCCAATTTCTGGCCCAGCAGGTTTCTCTTTGTAGTGTCTTTCAGCACATCCAAAATGCTAGGCCTCCTGCCAC CAACGTGTCAGAGCAATGTCCAACTGTCAGGCTCTCAGAGATGCCTCAGTTTCCCTAGCATGAGCACCAGCCGACACACACAGTCCACTG AGATGATAATTCTGTTCTCTCCAAAGCAAAAAGCTGGGCGAGGGGTAGTCTCAATTTCTGTCAGTGCTCAAAGGAATAACACCAAAAGAA TCAACACAGAATCTCCCAGACACACGTGACCCAGCTCGTGGCGCCGTGGGTCCGTAGGAGGGACAGTACCTCACAACAGGCCCAGCGGGG GACCACCTCTCTGTACAATTGGAATGCGTTTTACTTTTCTTTTCTCTCCTTTTTTCATTCCGATTTTTTTTGCATGTTTCTTTTTGAAAT GGGCAAAATGTGTAGCAGCCTGCATGAGCACAGTTGTTTTGGGGAAAGATACTGGAGTATGATGTACTCACACCTGCAAATCTGAGCATC GCGAGGTTAAACGTTCCACCTTTTTTTGTAATCGTCAACAGCACAACTATTTTGTATTGTTGTTTGTATCATTTTGTACCAAAAAAAAAA AGGAAAAAAAAAGGGAAGAGAGTTGATGTTTTCAGTGTGTTTCCAGTGCCAGACAGTCTTGGTCCTGAACTCAGTAGACCCTTGCGGAGC >15260_15260_1_CDK5RAP1-CDH4_CDK5RAP1_chr20_31967267_ENST00000346416_CDH4_chr20_60503248_ENST00000360469_length(amino acids)=410AA_BP=373 MFSAMHPLQCVLQVQRSLGWGPLASVSWLSLRMCRAHSSLSSTMCPSPERQEDGARKDFSSRLAAGPTFQHFLKSASAPQEKLSSEVEDP PPYLMMDELLGRQRKVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNRLHQLKALKTRRPRSRVPL RIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCI VPFTRGRERSRPIASILEEVKKLSEQGLKEVTLLGQNVNSFRDNSEVQFNSAVPTNLSRGFTTNYKTKQGGLRFAHLLDQVSRVDPEMRI -------------------------------------------------------------- >15260_15260_2_CDK5RAP1-CDH4_CDK5RAP1_chr20_31967267_ENST00000346416_CDH4_chr20_60503248_ENST00000543233_length(transcript)=2547nt_BP=1261nt AGCATGACCCGGCCTGAAGTAGCGGCGGAACGGAAGTCGCTTGTGTATGAACGCAGCGGCGGACCTGTGAGGGGATCCGACTTGCCGGCA GAACTTACGCTGCGGGACCCCGGGCACTGTTGCTGCTGCGGGAGACTGTGGGCTGTTTAGTGCCATGCACCCTTTACAGTGTGTCCTCCA AGTGCAGAGGTCTCTGGGGTGGGGACCATTGGCCTCTGTGTCTTGGCTGTCGCTGAGGATGTGCAGGGCACACAGCAGTCTCTCTAGTAC CATGTGTCCCAGTCCAGAGAGGCAGGAGGATGGAGCTCGGAAGGATTTCAGCTCCAGGCTGGCTGCTGGACCGACTTTTCAACATTTTTT AAAAAGTGCCTCAGCTCCTCAGGAGAAGCTGTCTTCAGAAGTGGAAGACCCACCTCCCTATCTCATGATGGATGAACTTCTTGGAAGGCA GAGAAAAGTCTACCTCGAGACCTATGGCTGCCAGATGAATGTGAATGACACAGAGATAGCCTGGTCCATCTTACAGAAGAGTGGCTACCT GCGGACCAGTAACCTCCAAGAGGCAGATGTGATTCTCCTTGTCACATGCTCTATCAGGGAGAAGGCTGAGCAGACCATCTGGAACCGTTT ACATCAGCTTAAAGCCTTGAAGACAAGGCGGCCCCGCTCCCGGGTTCCTCTGAGGATTGGAATTCTAGGCTGCATGGCTGAGAGGTTGAA GGAGGAGATTCTCAACAGAGAGAAAATGGTAGATATTTTGGCTGGTCCTGATGCCTACCGGGACCTTCCCCGGCTGCTGGCTGTTGCTGA GTCGGGCCAGCAAGCTGCCAACGTGCTGCTCTCTCTGGACGAGACCTATGCTGATGTCATGCCAGTCCAGACAAGCGCCAGTGCCACGTC TGCCTTTGTGTCAATCATGCGAGGCTGTGACAACATGTGTAGCTACTGCATTGTTCCTTTCACCCGGGGCAGGGAGAGGAGTCGGCCTAT TGCCTCCATTCTAGAGGAAGTGAAGAAGCTTTCTGAGCAGGGGCTGAAAGAAGTGACACTTCTTGGTCAGAATGTTAATAGTTTTCGGGA CAATTCGGAGGTCCAGTTCAACAGTGCAGTGCCTACCAATCTCAGTCGTGGCTTTACCACCAACTATAAAACCAAGCAAGGAGGACTTCG TTTTGCTCATCTTCTGGATCAGGTCTCCAGAGTAGATCCTGAAATGAGGATCCGTTTTACCTCTCCCCACCCCAAGGATTTTCCTGATGA GGGATACCCCCGGCCAGCGGCACCGGGACCCTCCAGATCTATCTCATTGACATCAACGACAACGCCCCTGAGCTGCTGCCCAAGGAGGCG CAGATCTGCGAGAAGCCCAACCTGAACGCCATCAACATCACGGCGGCCGACGCTGACGTCGACCCCAACATCGGCCCCTACGTCTTCGAG CTGCCCTTTGTCCCGGCGGCCGTGCGGAAGAACTGGACCATCACCCGCCTGAACGGTGACTATGCCCAACTCAGCTTGCGCATCCTGTAC CTGGAGGCCGGGATGTATGACGTCCCCATCATCGTCACAGACTCTGGAAACCCTCCCCTGTCCAACACGTCCATCATCAAAGTCAAGGTG TGCCCATGTGATGACAACGGGGACTGCACCACCATTGGCGCAGTGGCAGCGGCTGGTCTGGGCACCGGTGCCATCGTGGCCATCCTCATC TGCATCCTCATCCTGCTGACCATGGTCCTGCTGTTTGTCATGTGGATGAAGCGGCGAGAGAAGGAGCGCCACACGAAGCAGCTGCTCATT GACCCCGAGGACGACGTCCGCGACAACATCCTCAAGTATGACGAGGAAGGCGGTGGCGAGGAGGACCAGGACTACGACCTCAGCCAGCTG CAGCAGCCGGAAGCCATGGGGCACGTGCCAAGCAAAGCCCCTGGCGTGCGTCGCGTGGATGAGCGGCCGGTGGGCGCTGAGCCCCAGTAC CCGATCAGGCCCATGGTGCCGCACCCAGGCGACATCGGTGACTTCATCAATGAGGGACTCCGCGCTGCTGACAACGACCCCACGGCACCC CCCTATGACTCCCTGCTGGTCTTCGACTACGAGGGGAGCGGCTCCACCGCAGGCTCCGTCAGCTCCCTGAACTCATCCAGTTCCGGGGAC CAAGACTACGATTACCTCAACGACTGGGGGCCCAGATTCAAGAAGCTGGCGGACATGTATGGAGGTGGTGAAGAGGATTGACTGACCTCG CATCTTCGGACCGAAGTGAGAGCCGTGCTCGGACGCCGGAGGAGCAGGACTGAGCAGAGGCGGCCGGTCTTCCCGACTCCCTGCGGCTGT GTCCTTAGTGCTGTTAGGAGGCCCCCCAATCCCCACGTTGAGCTGTCTAGCATGAGCACCCACCCCCACAGCGCCCTGCACCCGGCCGCT GCCCAGCACCGCGCTGGCTGGCACTGAAGGACAGCAAGAGGCACTCTGTCTTCACTTGAATTTCCTAGAACAGAAGCACTGTTTTTAAAA >15260_15260_2_CDK5RAP1-CDH4_CDK5RAP1_chr20_31967267_ENST00000346416_CDH4_chr20_60503248_ENST00000543233_length(amino acids)=410AA_BP=373 MFSAMHPLQCVLQVQRSLGWGPLASVSWLSLRMCRAHSSLSSTMCPSPERQEDGARKDFSSRLAAGPTFQHFLKSASAPQEKLSSEVEDP PPYLMMDELLGRQRKVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNRLHQLKALKTRRPRSRVPL RIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCI VPFTRGRERSRPIASILEEVKKLSEQGLKEVTLLGQNVNSFRDNSEVQFNSAVPTNLSRGFTTNYKTKQGGLRFAHLLDQVSRVDPEMRI -------------------------------------------------------------- >15260_15260_3_CDK5RAP1-CDH4_CDK5RAP1_chr20_31967267_ENST00000357886_CDH4_chr20_60503248_ENST00000360469_length(transcript)=5955nt_BP=1303nt AGCATGACCCGGCCTGAAGTAGCGGCGGAACGGAAGTCGCTTGTGTATGAACGCAGCGGCGGACCTGTGAGGGGATCCGACTTGCCGGCA GAACTTACGCTGCGGGACCCCGGGCACTGTTGCTGCTGCGGGAGACTGTGGGCTGTTTAGTGCCATGCACCCTTTACAGTGTGTCCTCCA AGTGCAGAGGTCTCTGGGGTGGGGACCATTGGCCTCTGTGTCTTGGCTGTCGCTGAGGATGTGCAGGGCACACAGCAGTCTCTCTAGTAC CATGTGTCCCAGTCCAGAGAGGCAGGAGGATGGAGCTCGGAAGGATTTCAGCTCCAGGCTGGCTGCTGGACCGACTTTTCAACATTTTTT AAAAAGTGCCTCAGCTCCTCAGGAGAAGCTGTCTTCAGAAGTGGAAGACCCACCTCCCTATCTCATGATGGATGAACTTCTTGGAAGGCA GAGAAAAGTCTACCTCGAGACCTATGGCTGCCAGATGAATGTGAATGACACAGAGATAGCCTGGTCCATCTTACAGAAGAGTGGCTACCT GCGGACCAGTAACCTCCAAGAGGCAGATGTGATTCTCCTTGTCACATGCTCTATCAGGGAGAAGGCTGAGCAGACCATCTGGAACCGTTT ACATCAGCTTAAAGCCTTGAAGACAAGGCGGCCCCGCTCCCGGGTTCCTCTGAGGATTGGAATTCTAGGCTGCATGGCTGAGAGGTTGAA GGAGGAGATTCTCAACAGAGAGAAAATGGTAGATATTTTGGCTGGTCCTGATGCCTACCGGGACCTTCCCCGGCTGCTGGCTGTTGCTGA GTCGGGCCAGCAAGCTGCCAACGTGCTGCTCTCTCTGGACGAGACCTATGCTGATGTCATGCCAGTCCAGACAAGCGCCAGTGCCACGTC TGCCTTTGTGTCAATCATGCGAGGCTGTGACAACATGTGTAGCTACTGCATTGTTCCTTTCACCCGGGGCAGGGAGAGGAGTCGGCCTAT TGCCTCCATTCTAGAGGAAGTGAAGAAGCTTTCTGAGCAGGTGTTCCTCCCACCTCGGCCTCCCAAAGTGTTGGGATTACAGGGGCTGAA AGAAGTGACACTTCTTGGTCAGAATGTTAATAGTTTTCGGGACAATTCGGAGGTCCAGTTCAACAGTGCAGTGCCTACCAATCTCAGTCG TGGCTTTACCACCAACTATAAAACCAAGCAAGGAGGACTTCGTTTTGCTCATCTTCTGGATCAGGTCTCCAGAGTAGATCCTGAAATGAG GATCCGTTTTACCTCTCCCCACCCCAAGGATTTTCCTGATGAGGGATACCCCCGGCCAGCGGCACCGGGACCCTCCAGATCTATCTCATT GACATCAACGACAACGCCCCTGAGCTGCTGCCCAAGGAGGCGCAGATCTGCGAGAAGCCCAACCTGAACGCCATCAACATCACGGCGGCC GACGCTGACGTCGACCCCAACATCGGCCCCTACGTCTTCGAGCTGCCCTTTGTCCCGGCGGCCGTGCGGAAGAACTGGACCATCACCCGC CTGAACGGTGACTATGCCCAACTCAGCTTGCGCATCCTGTACCTGGAGGCCGGGATGTATGACGTCCCCATCATCGTCACAGACTCTGGA AACCCTCCCCTGTCCAACACGTCCATCATCAAAGTCAAGGTGTGCCCATGTGATGACAACGGGGACTGCACCACCATTGGCGCAGTGGCA GCGGCTGGTCTGGGCACCGGTGCCATCGTGGCCATCCTCATCTGCATCCTCATCCTGCTGACCATGGTCCTGCTGTTTGTCATGTGGATG AAGCGGCGAGAGAAGGAGCGCCACACGAAGCAGCTGCTCATTGACCCCGAGGACGACGTCCGCGACAACATCCTCAAGTATGACGAGGAA GGCGGTGGCGAGGAGGACCAGGACTACGACCTCAGCCAGCTGCAGCAGCCGGAAGCCATGGGGCACGTGCCAAGCAAAGCCCCTGGCGTG CGTCGCGTGGATGAGCGGCCGGTGGGCGCTGAGCCCCAGTACCCGATCAGGCCCATGGTGCCGCACCCAGGCGACATCGGTGACTTCATC AATGAGGGACTCCGCGCTGCTGACAACGACCCCACGGCACCCCCCTATGACTCCCTGCTGGTCTTCGACTACGAGGGGAGCGGCTCCACC GCAGGCTCCGTCAGCTCCCTGAACTCATCCAGTTCCGGGGACCAAGACTACGATTACCTCAACGACTGGGGGCCCAGATTCAAGAAGCTG GCGGACATGTATGGAGGTGGTGAAGAGGATTGACTGACCTCGCATCTTCGGACCGAAGTGAGAGCCGTGCTCGGACGCCGGAGGAGCAGG ACTGAGCAGAGGCGGCCGGTCTTCCCGACTCCCTGCGGCTGTGTCCTTAGTGCTGTTAGGAGGCCCCCCAATCCCCACGTTGAGCTGTCT AGCATGAGCACCCACCCCCACAGCGCCCTGCACCCGGCCGCTGCCCAGCACCGCGCTGGCTGGCACTGAAGGACAGCAAGAGGCACTCTG TCTTCACTTGAATTTCCTAGAACAGAAGCACTGTTTTTAAAAAAAAAAAAAAAAAAAGAAGAAAGAAAGAAAAAAAAAAAAAAAAGAAAG TGCCTTTTGGTATGTATCAGATTCCCTCAAACTCAGGAGTGTCTAAAGCAGACAGACCGTCCCCACCTTCCCATCCCGAGCGGCCTCCAA CCCCAGCTAGTCCCAGCTCTGAAGGCATCATTCAGAAATGGGGGAGACTGTGTCTGTCTTTCTTACTTTTTTTTTGGTCTTTTATTAAGA AAAAGAAAGTGGGTGACTTGTTTGAAAACAGAGTGGGGTTCAAATCCCAGCAGCCTTTGCTGTACACAGCTGGGGGTCTCTTGAGCCTCT TGGGAGTCAAGGCCAGCTGGGAGGCTTAGCCCTTCAGCCCCAGCAGAAGGCCCTGGGGCTGGTGGGGCTCAGAATACCCCTACCTTGTGG CTGCTCCCCACCCCTCCCGGATGCTGTGAGGAGCTCAGGCAGGGGCCTGGAGGGGAACAGGGGTCATCCTGAAGGGGCTCCACCCCCAGT CAACCCAGGCCTCCCTCAGGGACACCTGTCACCCTGAGTGCCACCAGGTCCCCTCTGCCTTTGGTCCAGAAGAGTGAGTTGTCCAAACCA GCCAGCATCTGGCTCCAGCCCTCCAACCCTGGCGACCAGACCCCATGGGGTGCCATCAACGGCCCCGCGACAGGCATCAATTCAAACCCC AGGACACTCTCGACAGCTCCAACCATCCGGAGGGCTGTGCAGATGGCAGGAACCAAGGACCCTCCCTGGCAGCTGAAGAGGGCAGTTACG GTTGGGCGTGGTGACCAGAACACACCCAGCAGCCTGCGAAGCCTCCCCGTCCCCAGCCTGTGCTCCTGATTCCCGCCAGACGCTTGTGAG CCTGTGTGGGTGGCAGGAGGCCCCGTCTTGCCGTGCCTACCTGTCGCACAGATGCCTCTGCACGCTGCAGACGGTGCCTCTCCTCTCCTA TGGACCCTCGTCGGGGGCAGGCAGCGGCCGGGTCCAAACTTGCTGCTGTCCTCGAGGCTGGCACTGCTATCTCCAGGGCTGGGTTGACTC AAGCCAGACAGGGGGAAGGAATTGGTTCTGCAGGACAGTGAGAGGGTCTGTGTCCCGGCACCCCTGGGACAGCGCTCGGCTGCCTGTGCT CACTGCATGAGAAAACTCAGAGGGTGCATTCTCCCTCTGGCATGGCTGTGTCTGGGCGCCTTGGGCTGCGGCAGGGGGCAGGCCCCACGT GGGGAAGCCTCGTGCTTGGTCAGCTTTCTGTCTCTCCCAGGCCAGTGACAACTGGCTTCCCGAGGAAGGAGGTGAGGTACCAGGGACCCT GGGCAGGACCTGGTGTCGGGCAGGGCGGTGCCAGCACTGGGGAAGGACAGGGAGCCCTCCCGGAGCCCCACCCTGCACCTGCCACTGGGG TCAGGGAGTGTCTCGGGGTGCCTTTGGGGGCAGCATGAGCTCCACCAGGGGCCCCGGCCCCCACCTCAGCCTATGGCCCTTCCCCATGGC TAAGGTCATGCCTTTTCTGAACAGCTTTGGCCTTGAGTGCACACATCTGTGCCAGGCTCACGGCATGTTCCCGTTGGATGTCAGGGTCCT TGTCCAAACCAAACTCACAGCTGCCCCTGTGCAGCCTTCAGAGTTGAGCTGGGGTCTCAGTCTCCAACCTGTCCTTTCTGACCCTCCCAT GGCTGCCCAGGGAGGGCGGGGTTCACTGTGCCACGTGCTGGGTGCCCCCCTCTGCAGACAGCCAGTCCAGGAGATGGACCAACAGAGGTC AAGGGGCAGCTGGCCAGGCCGCACCGGGGTCCCCGAGTTCTGAGCTGTGCTATGCAAACAAGAATGCTCCTGTGTGGGGGGGCATGGCCG TTGGAGGTATAGCTGGGCGGGTAGTGGAAGGACTGGAAATCTCTGTTGTTGTTTGGGGAAGTCCATGCTTCAGTCCTTCGGAGTATGCGT GGATTGTTCGAAGTGTGACTATGGCCCGGGAGCCAGGGCAGCATGAACTCCTTTCTCTGAAATTTCGAGGCCTCCTTGGGTTCCCTGAAC TCCGGGCTGATGTTCCCAGGACCCAGCACCAGGAGACCCCAGTCCCGCCAGCAGCCGCCGCTACCCAGGAGGGCTGGGCGACATTGGCCG CCTCCCACTAGCTCCCCCTCCTCGCCCACAGCCTCTTGTCACTGCCAAGCCCCCGTTCCTTTTGCCCAAATCACGCAGGCGGAAGCTGCA GTGCCAGCTGGAGGGATGTTCATAGGGCTTCCTGTGCCCATCCCTGCTCCAAACAGCTGGACAGCTTCCCCTCTACCCCCACCCTGGTGA GCCCCTGGGGGCCAGAGAAAGATGGGGTTCCTGCACCTTCCCAGCTCCACCTCTGAACTTGAGTTAGCGTTAGCTAAGCATACAATCAGT GTCGAACGTCTCTCTTCCTTAAGCTTGTAGATACGACTGCCTATAATCAGGGGACTCCCACTGGAGGCCGGGAGGCCAATGCTGGCCAGG TGCGAGGGCATGGTTTGGTTCCTTTAGGGAATTTTTGTTTTGCAAACAGGAGAAACCTGTGCTGCAGGTTGGAGTGGCAGGAACGACTGG CCTTGGTCAGCAGGCAGCCCCCAGCCTAGGGCCACAGTCCTCTTCAGGGCCTGGGCAGCCCCAATTTCTGGCCCAGCAGGTTTCTCTTTG TAGTGTCTTTCAGCACATCCAAAATGCTAGGCCTCCTGCCACCAACGTGTCAGAGCAATGTCCAACTGTCAGGCTCTCAGAGATGCCTCA GTTTCCCTAGCATGAGCACCAGCCGACACACACAGTCCACTGAGATGATAATTCTGTTCTCTCCAAAGCAAAAAGCTGGGCGAGGGGTAG TCTCAATTTCTGTCAGTGCTCAAAGGAATAACACCAAAAGAATCAACACAGAATCTCCCAGACACACGTGACCCAGCTCGTGGCGCCGTG GGTCCGTAGGAGGGACAGTACCTCACAACAGGCCCAGCGGGGGACCACCTCTCTGTACAATTGGAATGCGTTTTACTTTTCTTTTCTCTC CTTTTTTCATTCCGATTTTTTTTGCATGTTTCTTTTTGAAATGGGCAAAATGTGTAGCAGCCTGCATGAGCACAGTTGTTTTGGGGAAAG ATACTGGAGTATGATGTACTCACACCTGCAAATCTGAGCATCGCGAGGTTAAACGTTCCACCTTTTTTTGTAATCGTCAACAGCACAACT ATTTTGTATTGTTGTTTGTATCATTTTGTACCAAAAAAAAAAAGGAAAAAAAAAGGGAAGAGAGTTGATGTTTTCAGTGTGTTTCCAGTG CCAGACAGTCTTGGTCCTGAACTCAGTAGACCCTTGCGGAGCGGTTGTGCGCGGGCAGGCGGGGCGCGCTGCTCCAGAGAATGAATAAAG >15260_15260_3_CDK5RAP1-CDH4_CDK5RAP1_chr20_31967267_ENST00000357886_CDH4_chr20_60503248_ENST00000360469_length(amino acids)=424AA_BP=387 MFSAMHPLQCVLQVQRSLGWGPLASVSWLSLRMCRAHSSLSSTMCPSPERQEDGARKDFSSRLAAGPTFQHFLKSASAPQEKLSSEVEDP PPYLMMDELLGRQRKVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNRLHQLKALKTRRPRSRVPL RIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCI VPFTRGRERSRPIASILEEVKKLSEQVFLPPRPPKVLGLQGLKEVTLLGQNVNSFRDNSEVQFNSAVPTNLSRGFTTNYKTKQGGLRFAH -------------------------------------------------------------- >15260_15260_4_CDK5RAP1-CDH4_CDK5RAP1_chr20_31967267_ENST00000357886_CDH4_chr20_60503248_ENST00000543233_length(transcript)=2589nt_BP=1303nt AGCATGACCCGGCCTGAAGTAGCGGCGGAACGGAAGTCGCTTGTGTATGAACGCAGCGGCGGACCTGTGAGGGGATCCGACTTGCCGGCA GAACTTACGCTGCGGGACCCCGGGCACTGTTGCTGCTGCGGGAGACTGTGGGCTGTTTAGTGCCATGCACCCTTTACAGTGTGTCCTCCA AGTGCAGAGGTCTCTGGGGTGGGGACCATTGGCCTCTGTGTCTTGGCTGTCGCTGAGGATGTGCAGGGCACACAGCAGTCTCTCTAGTAC CATGTGTCCCAGTCCAGAGAGGCAGGAGGATGGAGCTCGGAAGGATTTCAGCTCCAGGCTGGCTGCTGGACCGACTTTTCAACATTTTTT AAAAAGTGCCTCAGCTCCTCAGGAGAAGCTGTCTTCAGAAGTGGAAGACCCACCTCCCTATCTCATGATGGATGAACTTCTTGGAAGGCA GAGAAAAGTCTACCTCGAGACCTATGGCTGCCAGATGAATGTGAATGACACAGAGATAGCCTGGTCCATCTTACAGAAGAGTGGCTACCT GCGGACCAGTAACCTCCAAGAGGCAGATGTGATTCTCCTTGTCACATGCTCTATCAGGGAGAAGGCTGAGCAGACCATCTGGAACCGTTT ACATCAGCTTAAAGCCTTGAAGACAAGGCGGCCCCGCTCCCGGGTTCCTCTGAGGATTGGAATTCTAGGCTGCATGGCTGAGAGGTTGAA GGAGGAGATTCTCAACAGAGAGAAAATGGTAGATATTTTGGCTGGTCCTGATGCCTACCGGGACCTTCCCCGGCTGCTGGCTGTTGCTGA GTCGGGCCAGCAAGCTGCCAACGTGCTGCTCTCTCTGGACGAGACCTATGCTGATGTCATGCCAGTCCAGACAAGCGCCAGTGCCACGTC TGCCTTTGTGTCAATCATGCGAGGCTGTGACAACATGTGTAGCTACTGCATTGTTCCTTTCACCCGGGGCAGGGAGAGGAGTCGGCCTAT TGCCTCCATTCTAGAGGAAGTGAAGAAGCTTTCTGAGCAGGTGTTCCTCCCACCTCGGCCTCCCAAAGTGTTGGGATTACAGGGGCTGAA AGAAGTGACACTTCTTGGTCAGAATGTTAATAGTTTTCGGGACAATTCGGAGGTCCAGTTCAACAGTGCAGTGCCTACCAATCTCAGTCG TGGCTTTACCACCAACTATAAAACCAAGCAAGGAGGACTTCGTTTTGCTCATCTTCTGGATCAGGTCTCCAGAGTAGATCCTGAAATGAG GATCCGTTTTACCTCTCCCCACCCCAAGGATTTTCCTGATGAGGGATACCCCCGGCCAGCGGCACCGGGACCCTCCAGATCTATCTCATT GACATCAACGACAACGCCCCTGAGCTGCTGCCCAAGGAGGCGCAGATCTGCGAGAAGCCCAACCTGAACGCCATCAACATCACGGCGGCC GACGCTGACGTCGACCCCAACATCGGCCCCTACGTCTTCGAGCTGCCCTTTGTCCCGGCGGCCGTGCGGAAGAACTGGACCATCACCCGC CTGAACGGTGACTATGCCCAACTCAGCTTGCGCATCCTGTACCTGGAGGCCGGGATGTATGACGTCCCCATCATCGTCACAGACTCTGGA AACCCTCCCCTGTCCAACACGTCCATCATCAAAGTCAAGGTGTGCCCATGTGATGACAACGGGGACTGCACCACCATTGGCGCAGTGGCA GCGGCTGGTCTGGGCACCGGTGCCATCGTGGCCATCCTCATCTGCATCCTCATCCTGCTGACCATGGTCCTGCTGTTTGTCATGTGGATG AAGCGGCGAGAGAAGGAGCGCCACACGAAGCAGCTGCTCATTGACCCCGAGGACGACGTCCGCGACAACATCCTCAAGTATGACGAGGAA GGCGGTGGCGAGGAGGACCAGGACTACGACCTCAGCCAGCTGCAGCAGCCGGAAGCCATGGGGCACGTGCCAAGCAAAGCCCCTGGCGTG CGTCGCGTGGATGAGCGGCCGGTGGGCGCTGAGCCCCAGTACCCGATCAGGCCCATGGTGCCGCACCCAGGCGACATCGGTGACTTCATC AATGAGGGACTCCGCGCTGCTGACAACGACCCCACGGCACCCCCCTATGACTCCCTGCTGGTCTTCGACTACGAGGGGAGCGGCTCCACC GCAGGCTCCGTCAGCTCCCTGAACTCATCCAGTTCCGGGGACCAAGACTACGATTACCTCAACGACTGGGGGCCCAGATTCAAGAAGCTG GCGGACATGTATGGAGGTGGTGAAGAGGATTGACTGACCTCGCATCTTCGGACCGAAGTGAGAGCCGTGCTCGGACGCCGGAGGAGCAGG ACTGAGCAGAGGCGGCCGGTCTTCCCGACTCCCTGCGGCTGTGTCCTTAGTGCTGTTAGGAGGCCCCCCAATCCCCACGTTGAGCTGTCT AGCATGAGCACCCACCCCCACAGCGCCCTGCACCCGGCCGCTGCCCAGCACCGCGCTGGCTGGCACTGAAGGACAGCAAGAGGCACTCTG >15260_15260_4_CDK5RAP1-CDH4_CDK5RAP1_chr20_31967267_ENST00000357886_CDH4_chr20_60503248_ENST00000543233_length(amino acids)=424AA_BP=387 MFSAMHPLQCVLQVQRSLGWGPLASVSWLSLRMCRAHSSLSSTMCPSPERQEDGARKDFSSRLAAGPTFQHFLKSASAPQEKLSSEVEDP PPYLMMDELLGRQRKVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNRLHQLKALKTRRPRSRVPL RIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCI VPFTRGRERSRPIASILEEVKKLSEQVFLPPRPPKVLGLQGLKEVTLLGQNVNSFRDNSEVQFNSAVPTNLSRGFTTNYKTKQGGLRFAH -------------------------------------------------------------- >15260_15260_5_CDK5RAP1-CDH4_CDK5RAP1_chr20_31967267_ENST00000544843_CDH4_chr20_60503248_ENST00000360469_length(transcript)=5871nt_BP=1219nt GTGTATGAACGCAGCGGCGGACCTGTGAGGGGATCCGACTTGCCGGCAGAACTTACGCTGCGGGACCCCGGGCACTGTTGCTGCTGCGGG AGACTGTGGGCTGTTTAGTGCCATGCACCCTTTACAGTGTGTCCTCCAAGTGCAGAGGTCTCTGGGGTGGGGACCATTGGCCTCTGTGTC TTGGCTGTCGCTGAGGATGTGCAGGGCACACAGCAGTCTCTCTAGTACCATGTGTCCCAGTCCAGAGAGGCAGGAGGATGGAGCTCGGAA GGATTTCAGCTCCAGGCTGGCTGCTGGACCGACTTTTCAACATTTTTTAAAAAGTGCCTCAGCTCCTCAGGAGAAGCTGTCTTCAGAAGT GGAAGACCCACCTCCCTATCTCATGATGGATGAACTTCTTGGAAGGCAGAGAAAAGTCTACCTCGAGACCTATGGCTGCCAGATGAATGT GAATGACACAGAGATAGCCTGGTCCATCTTACAGAAGAGTGGCTACCTGCGGACCAGTAACCTCCAAGAGGCAGATGTGATTCTCCTTGT CACATGCTCTATCAGGGAGAAGGCTGAGCAGACCATCTGGAACCGTTTACATCAGCTTAAAGCCTTGAAGACAAGGCGGCCCCGCTCCCG GGTTCCTCTGAGGATTGGAATTCTAGGCTGCATGGCTGAGAGGTTGAAGGAGGAGATTCTCAACAGAGAGAAAATGGTAGATATTTTGGC TGGTCCTGATGCCTACCGGGACCTTCCCCGGCTGCTGGCTGTTGCTGAGTCGGGCCAGCAAGCTGCCAACGTGCTGCTCTCTCTGGACGA GACCTATGCTGATGTCATGCCAGTCCAGACAAGCGCCAGTGCCACGTCTGCCTTTGTGTCAATCATGCGAGGCTGTGACAACATGTGTAG CTACTGCATTGTTCCTTTCACCCGGGGCAGGGAGAGGAGTCGGCCTATTGCCTCCATTCTAGAGGAAGTGAAGAAGCTTTCTGAGCAGGG GCTGAAAGAAGTGACACTTCTTGGTCAGAATGTTAATAGTTTTCGGGACAATTCGGAGGTCCAGTTCAACAGTGCAGTGCCTACCAATCT CAGTCGTGGCTTTACCACCAACTATAAAACCAAGCAAGGAGGACTTCGTTTTGCTCATCTTCTGGATCAGGTCTCCAGAGTAGATCCTGA AATGAGGATCCGTTTTACCTCTCCCCACCCCAAGGATTTTCCTGATGAGGGATACCCCCGGCCAGCGGCACCGGGACCCTCCAGATCTAT CTCATTGACATCAACGACAACGCCCCTGAGCTGCTGCCCAAGGAGGCGCAGATCTGCGAGAAGCCCAACCTGAACGCCATCAACATCACG GCGGCCGACGCTGACGTCGACCCCAACATCGGCCCCTACGTCTTCGAGCTGCCCTTTGTCCCGGCGGCCGTGCGGAAGAACTGGACCATC ACCCGCCTGAACGGTGACTATGCCCAACTCAGCTTGCGCATCCTGTACCTGGAGGCCGGGATGTATGACGTCCCCATCATCGTCACAGAC TCTGGAAACCCTCCCCTGTCCAACACGTCCATCATCAAAGTCAAGGTGTGCCCATGTGATGACAACGGGGACTGCACCACCATTGGCGCA GTGGCAGCGGCTGGTCTGGGCACCGGTGCCATCGTGGCCATCCTCATCTGCATCCTCATCCTGCTGACCATGGTCCTGCTGTTTGTCATG TGGATGAAGCGGCGAGAGAAGGAGCGCCACACGAAGCAGCTGCTCATTGACCCCGAGGACGACGTCCGCGACAACATCCTCAAGTATGAC GAGGAAGGCGGTGGCGAGGAGGACCAGGACTACGACCTCAGCCAGCTGCAGCAGCCGGAAGCCATGGGGCACGTGCCAAGCAAAGCCCCT GGCGTGCGTCGCGTGGATGAGCGGCCGGTGGGCGCTGAGCCCCAGTACCCGATCAGGCCCATGGTGCCGCACCCAGGCGACATCGGTGAC TTCATCAATGAGGGACTCCGCGCTGCTGACAACGACCCCACGGCACCCCCCTATGACTCCCTGCTGGTCTTCGACTACGAGGGGAGCGGC TCCACCGCAGGCTCCGTCAGCTCCCTGAACTCATCCAGTTCCGGGGACCAAGACTACGATTACCTCAACGACTGGGGGCCCAGATTCAAG AAGCTGGCGGACATGTATGGAGGTGGTGAAGAGGATTGACTGACCTCGCATCTTCGGACCGAAGTGAGAGCCGTGCTCGGACGCCGGAGG AGCAGGACTGAGCAGAGGCGGCCGGTCTTCCCGACTCCCTGCGGCTGTGTCCTTAGTGCTGTTAGGAGGCCCCCCAATCCCCACGTTGAG CTGTCTAGCATGAGCACCCACCCCCACAGCGCCCTGCACCCGGCCGCTGCCCAGCACCGCGCTGGCTGGCACTGAAGGACAGCAAGAGGC ACTCTGTCTTCACTTGAATTTCCTAGAACAGAAGCACTGTTTTTAAAAAAAAAAAAAAAAAAAGAAGAAAGAAAGAAAAAAAAAAAAAAA AGAAAGTGCCTTTTGGTATGTATCAGATTCCCTCAAACTCAGGAGTGTCTAAAGCAGACAGACCGTCCCCACCTTCCCATCCCGAGCGGC CTCCAACCCCAGCTAGTCCCAGCTCTGAAGGCATCATTCAGAAATGGGGGAGACTGTGTCTGTCTTTCTTACTTTTTTTTTGGTCTTTTA TTAAGAAAAAGAAAGTGGGTGACTTGTTTGAAAACAGAGTGGGGTTCAAATCCCAGCAGCCTTTGCTGTACACAGCTGGGGGTCTCTTGA GCCTCTTGGGAGTCAAGGCCAGCTGGGAGGCTTAGCCCTTCAGCCCCAGCAGAAGGCCCTGGGGCTGGTGGGGCTCAGAATACCCCTACC TTGTGGCTGCTCCCCACCCCTCCCGGATGCTGTGAGGAGCTCAGGCAGGGGCCTGGAGGGGAACAGGGGTCATCCTGAAGGGGCTCCACC CCCAGTCAACCCAGGCCTCCCTCAGGGACACCTGTCACCCTGAGTGCCACCAGGTCCCCTCTGCCTTTGGTCCAGAAGAGTGAGTTGTCC AAACCAGCCAGCATCTGGCTCCAGCCCTCCAACCCTGGCGACCAGACCCCATGGGGTGCCATCAACGGCCCCGCGACAGGCATCAATTCA AACCCCAGGACACTCTCGACAGCTCCAACCATCCGGAGGGCTGTGCAGATGGCAGGAACCAAGGACCCTCCCTGGCAGCTGAAGAGGGCA GTTACGGTTGGGCGTGGTGACCAGAACACACCCAGCAGCCTGCGAAGCCTCCCCGTCCCCAGCCTGTGCTCCTGATTCCCGCCAGACGCT TGTGAGCCTGTGTGGGTGGCAGGAGGCCCCGTCTTGCCGTGCCTACCTGTCGCACAGATGCCTCTGCACGCTGCAGACGGTGCCTCTCCT CTCCTATGGACCCTCGTCGGGGGCAGGCAGCGGCCGGGTCCAAACTTGCTGCTGTCCTCGAGGCTGGCACTGCTATCTCCAGGGCTGGGT TGACTCAAGCCAGACAGGGGGAAGGAATTGGTTCTGCAGGACAGTGAGAGGGTCTGTGTCCCGGCACCCCTGGGACAGCGCTCGGCTGCC TGTGCTCACTGCATGAGAAAACTCAGAGGGTGCATTCTCCCTCTGGCATGGCTGTGTCTGGGCGCCTTGGGCTGCGGCAGGGGGCAGGCC CCACGTGGGGAAGCCTCGTGCTTGGTCAGCTTTCTGTCTCTCCCAGGCCAGTGACAACTGGCTTCCCGAGGAAGGAGGTGAGGTACCAGG GACCCTGGGCAGGACCTGGTGTCGGGCAGGGCGGTGCCAGCACTGGGGAAGGACAGGGAGCCCTCCCGGAGCCCCACCCTGCACCTGCCA CTGGGGTCAGGGAGTGTCTCGGGGTGCCTTTGGGGGCAGCATGAGCTCCACCAGGGGCCCCGGCCCCCACCTCAGCCTATGGCCCTTCCC CATGGCTAAGGTCATGCCTTTTCTGAACAGCTTTGGCCTTGAGTGCACACATCTGTGCCAGGCTCACGGCATGTTCCCGTTGGATGTCAG GGTCCTTGTCCAAACCAAACTCACAGCTGCCCCTGTGCAGCCTTCAGAGTTGAGCTGGGGTCTCAGTCTCCAACCTGTCCTTTCTGACCC TCCCATGGCTGCCCAGGGAGGGCGGGGTTCACTGTGCCACGTGCTGGGTGCCCCCCTCTGCAGACAGCCAGTCCAGGAGATGGACCAACA GAGGTCAAGGGGCAGCTGGCCAGGCCGCACCGGGGTCCCCGAGTTCTGAGCTGTGCTATGCAAACAAGAATGCTCCTGTGTGGGGGGGCA TGGCCGTTGGAGGTATAGCTGGGCGGGTAGTGGAAGGACTGGAAATCTCTGTTGTTGTTTGGGGAAGTCCATGCTTCAGTCCTTCGGAGT ATGCGTGGATTGTTCGAAGTGTGACTATGGCCCGGGAGCCAGGGCAGCATGAACTCCTTTCTCTGAAATTTCGAGGCCTCCTTGGGTTCC CTGAACTCCGGGCTGATGTTCCCAGGACCCAGCACCAGGAGACCCCAGTCCCGCCAGCAGCCGCCGCTACCCAGGAGGGCTGGGCGACAT TGGCCGCCTCCCACTAGCTCCCCCTCCTCGCCCACAGCCTCTTGTCACTGCCAAGCCCCCGTTCCTTTTGCCCAAATCACGCAGGCGGAA GCTGCAGTGCCAGCTGGAGGGATGTTCATAGGGCTTCCTGTGCCCATCCCTGCTCCAAACAGCTGGACAGCTTCCCCTCTACCCCCACCC TGGTGAGCCCCTGGGGGCCAGAGAAAGATGGGGTTCCTGCACCTTCCCAGCTCCACCTCTGAACTTGAGTTAGCGTTAGCTAAGCATACA ATCAGTGTCGAACGTCTCTCTTCCTTAAGCTTGTAGATACGACTGCCTATAATCAGGGGACTCCCACTGGAGGCCGGGAGGCCAATGCTG GCCAGGTGCGAGGGCATGGTTTGGTTCCTTTAGGGAATTTTTGTTTTGCAAACAGGAGAAACCTGTGCTGCAGGTTGGAGTGGCAGGAAC GACTGGCCTTGGTCAGCAGGCAGCCCCCAGCCTAGGGCCACAGTCCTCTTCAGGGCCTGGGCAGCCCCAATTTCTGGCCCAGCAGGTTTC TCTTTGTAGTGTCTTTCAGCACATCCAAAATGCTAGGCCTCCTGCCACCAACGTGTCAGAGCAATGTCCAACTGTCAGGCTCTCAGAGAT GCCTCAGTTTCCCTAGCATGAGCACCAGCCGACACACACAGTCCACTGAGATGATAATTCTGTTCTCTCCAAAGCAAAAAGCTGGGCGAG GGGTAGTCTCAATTTCTGTCAGTGCTCAAAGGAATAACACCAAAAGAATCAACACAGAATCTCCCAGACACACGTGACCCAGCTCGTGGC GCCGTGGGTCCGTAGGAGGGACAGTACCTCACAACAGGCCCAGCGGGGGACCACCTCTCTGTACAATTGGAATGCGTTTTACTTTTCTTT TCTCTCCTTTTTTCATTCCGATTTTTTTTGCATGTTTCTTTTTGAAATGGGCAAAATGTGTAGCAGCCTGCATGAGCACAGTTGTTTTGG GGAAAGATACTGGAGTATGATGTACTCACACCTGCAAATCTGAGCATCGCGAGGTTAAACGTTCCACCTTTTTTTGTAATCGTCAACAGC ACAACTATTTTGTATTGTTGTTTGTATCATTTTGTACCAAAAAAAAAAAGGAAAAAAAAAGGGAAGAGAGTTGATGTTTTCAGTGTGTTT CCAGTGCCAGACAGTCTTGGTCCTGAACTCAGTAGACCCTTGCGGAGCGGTTGTGCGCGGGCAGGCGGGGCGCGCTGCTCCAGAGAATGA >15260_15260_5_CDK5RAP1-CDH4_CDK5RAP1_chr20_31967267_ENST00000544843_CDH4_chr20_60503248_ENST00000360469_length(amino acids)=410AA_BP=373 MFSAMHPLQCVLQVQRSLGWGPLASVSWLSLRMCRAHSSLSSTMCPSPERQEDGARKDFSSRLAAGPTFQHFLKSASAPQEKLSSEVEDP PPYLMMDELLGRQRKVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNRLHQLKALKTRRPRSRVPL RIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCI VPFTRGRERSRPIASILEEVKKLSEQGLKEVTLLGQNVNSFRDNSEVQFNSAVPTNLSRGFTTNYKTKQGGLRFAHLLDQVSRVDPEMRI -------------------------------------------------------------- >15260_15260_6_CDK5RAP1-CDH4_CDK5RAP1_chr20_31967267_ENST00000544843_CDH4_chr20_60503248_ENST00000543233_length(transcript)=2505nt_BP=1219nt GTGTATGAACGCAGCGGCGGACCTGTGAGGGGATCCGACTTGCCGGCAGAACTTACGCTGCGGGACCCCGGGCACTGTTGCTGCTGCGGG AGACTGTGGGCTGTTTAGTGCCATGCACCCTTTACAGTGTGTCCTCCAAGTGCAGAGGTCTCTGGGGTGGGGACCATTGGCCTCTGTGTC TTGGCTGTCGCTGAGGATGTGCAGGGCACACAGCAGTCTCTCTAGTACCATGTGTCCCAGTCCAGAGAGGCAGGAGGATGGAGCTCGGAA GGATTTCAGCTCCAGGCTGGCTGCTGGACCGACTTTTCAACATTTTTTAAAAAGTGCCTCAGCTCCTCAGGAGAAGCTGTCTTCAGAAGT GGAAGACCCACCTCCCTATCTCATGATGGATGAACTTCTTGGAAGGCAGAGAAAAGTCTACCTCGAGACCTATGGCTGCCAGATGAATGT GAATGACACAGAGATAGCCTGGTCCATCTTACAGAAGAGTGGCTACCTGCGGACCAGTAACCTCCAAGAGGCAGATGTGATTCTCCTTGT CACATGCTCTATCAGGGAGAAGGCTGAGCAGACCATCTGGAACCGTTTACATCAGCTTAAAGCCTTGAAGACAAGGCGGCCCCGCTCCCG GGTTCCTCTGAGGATTGGAATTCTAGGCTGCATGGCTGAGAGGTTGAAGGAGGAGATTCTCAACAGAGAGAAAATGGTAGATATTTTGGC TGGTCCTGATGCCTACCGGGACCTTCCCCGGCTGCTGGCTGTTGCTGAGTCGGGCCAGCAAGCTGCCAACGTGCTGCTCTCTCTGGACGA GACCTATGCTGATGTCATGCCAGTCCAGACAAGCGCCAGTGCCACGTCTGCCTTTGTGTCAATCATGCGAGGCTGTGACAACATGTGTAG CTACTGCATTGTTCCTTTCACCCGGGGCAGGGAGAGGAGTCGGCCTATTGCCTCCATTCTAGAGGAAGTGAAGAAGCTTTCTGAGCAGGG GCTGAAAGAAGTGACACTTCTTGGTCAGAATGTTAATAGTTTTCGGGACAATTCGGAGGTCCAGTTCAACAGTGCAGTGCCTACCAATCT CAGTCGTGGCTTTACCACCAACTATAAAACCAAGCAAGGAGGACTTCGTTTTGCTCATCTTCTGGATCAGGTCTCCAGAGTAGATCCTGA AATGAGGATCCGTTTTACCTCTCCCCACCCCAAGGATTTTCCTGATGAGGGATACCCCCGGCCAGCGGCACCGGGACCCTCCAGATCTAT CTCATTGACATCAACGACAACGCCCCTGAGCTGCTGCCCAAGGAGGCGCAGATCTGCGAGAAGCCCAACCTGAACGCCATCAACATCACG GCGGCCGACGCTGACGTCGACCCCAACATCGGCCCCTACGTCTTCGAGCTGCCCTTTGTCCCGGCGGCCGTGCGGAAGAACTGGACCATC ACCCGCCTGAACGGTGACTATGCCCAACTCAGCTTGCGCATCCTGTACCTGGAGGCCGGGATGTATGACGTCCCCATCATCGTCACAGAC TCTGGAAACCCTCCCCTGTCCAACACGTCCATCATCAAAGTCAAGGTGTGCCCATGTGATGACAACGGGGACTGCACCACCATTGGCGCA GTGGCAGCGGCTGGTCTGGGCACCGGTGCCATCGTGGCCATCCTCATCTGCATCCTCATCCTGCTGACCATGGTCCTGCTGTTTGTCATG TGGATGAAGCGGCGAGAGAAGGAGCGCCACACGAAGCAGCTGCTCATTGACCCCGAGGACGACGTCCGCGACAACATCCTCAAGTATGAC GAGGAAGGCGGTGGCGAGGAGGACCAGGACTACGACCTCAGCCAGCTGCAGCAGCCGGAAGCCATGGGGCACGTGCCAAGCAAAGCCCCT GGCGTGCGTCGCGTGGATGAGCGGCCGGTGGGCGCTGAGCCCCAGTACCCGATCAGGCCCATGGTGCCGCACCCAGGCGACATCGGTGAC TTCATCAATGAGGGACTCCGCGCTGCTGACAACGACCCCACGGCACCCCCCTATGACTCCCTGCTGGTCTTCGACTACGAGGGGAGCGGC TCCACCGCAGGCTCCGTCAGCTCCCTGAACTCATCCAGTTCCGGGGACCAAGACTACGATTACCTCAACGACTGGGGGCCCAGATTCAAG AAGCTGGCGGACATGTATGGAGGTGGTGAAGAGGATTGACTGACCTCGCATCTTCGGACCGAAGTGAGAGCCGTGCTCGGACGCCGGAGG AGCAGGACTGAGCAGAGGCGGCCGGTCTTCCCGACTCCCTGCGGCTGTGTCCTTAGTGCTGTTAGGAGGCCCCCCAATCCCCACGTTGAG CTGTCTAGCATGAGCACCCACCCCCACAGCGCCCTGCACCCGGCCGCTGCCCAGCACCGCGCTGGCTGGCACTGAAGGACAGCAAGAGGC >15260_15260_6_CDK5RAP1-CDH4_CDK5RAP1_chr20_31967267_ENST00000544843_CDH4_chr20_60503248_ENST00000543233_length(amino acids)=410AA_BP=373 MFSAMHPLQCVLQVQRSLGWGPLASVSWLSLRMCRAHSSLSSTMCPSPERQEDGARKDFSSRLAAGPTFQHFLKSASAPQEKLSSEVEDP PPYLMMDELLGRQRKVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNRLHQLKALKTRRPRSRVPL RIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCI VPFTRGRERSRPIASILEEVKKLSEQGLKEVTLLGQNVNSFRDNSEVQFNSAVPTNLSRGFTTNYKTKQGGLRFAHLLDQVSRVDPEMRI -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for CDK5RAP1-CDH4 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for CDK5RAP1-CDH4 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for CDK5RAP1-CDH4 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |