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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:USF1-SUPT7L (FusionGDB2 ID:HG7391TG9913) |
Fusion Gene Summary for USF1-SUPT7L |
Fusion gene summary |
Fusion gene information | Fusion gene name: USF1-SUPT7L | Fusion gene ID: hg7391tg9913 | Hgene | Tgene | Gene symbol | USF1 | SUPT7L | Gene ID | 7391 | 9913 |
Gene name | upstream transcription factor 1 | SPT7 like, STAGA complex subunit gamma | |
Synonyms | FCHL|FCHL1|HYPLIP1|MLTF|MLTFI|UEF|bHLHb11 | SPT7L|STAF65|STAF65(gamma)|STAF65G|SUPT7H | |
Cytomap | ('USF1')('SUPT7L') 1q23.3 | 2p23.3 | |
Type of gene | protein-coding | protein-coding | |
Description | upstream stimulatory factor 1class B basic helix-loop-helix protein 11major late transcription factor 1 | STAGA complex 65 subunit gammaSPT7 like, STAGA complex gamma subunitSPTF-associated factor 65 gammaSTAF65gammaSTAGA complex 65 gamma subunitadenocarcinoma antigen ART1suppressor of Ty 7-like | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000368019, ENST00000368020, ENST00000368021, ENST00000435396, | ||
Fusion gene scores | * DoF score | 5 X 8 X 2=80 | 3 X 4 X 1=12 |
# samples | 7 | 4 | |
** MAII score | log2(7/80*10)=-0.192645077942396 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/12*10)=1.73696559416621 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: USF1 [Title/Abstract] AND SUPT7L [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | USF1(161011907)-SUPT7L(27884169), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | USF1-SUPT7L seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. USF1-SUPT7L seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. USF1-SUPT7L seems lost the major protein functional domain in Hgene partner, which is a transcription factor due to the frame-shifted ORF. USF1-SUPT7L seems lost the major protein functional domain in Tgene partner, which is a epigenetic factor due to the frame-shifted ORF. USF1-SUPT7L seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | USF1 | GO:0006366 | transcription by RNA polymerase II | 2249772 |
Hgene | USF1 | GO:0019086 | late viral transcription | 2249772 |
Hgene | USF1 | GO:0032869 | cellular response to insulin stimulus | 19303849 |
Tgene | SUPT7L | GO:0043966 | histone H3 acetylation | 11564863 |
Tgene | SUPT7L | GO:0051457 | maintenance of protein location in nucleus | 15870280 |
Fusion gene breakpoints across USF1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across SUPT7L (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS5.0 | N/A | BP257468 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - |
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Fusion Gene ORF analysis for USF1-SUPT7L |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000368019 | ENST00000404798 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - |
5CDS-intron | ENST00000368020 | ENST00000404798 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - |
5CDS-intron | ENST00000368021 | ENST00000404798 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - |
5CDS-intron | ENST00000435396 | ENST00000404798 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - |
Frame-shift | ENST00000368019 | ENST00000337768 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - |
Frame-shift | ENST00000368019 | ENST00000405491 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - |
Frame-shift | ENST00000368020 | ENST00000337768 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - |
Frame-shift | ENST00000368020 | ENST00000405491 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - |
Frame-shift | ENST00000368021 | ENST00000406540 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - |
Frame-shift | ENST00000368021 | ENST00000464789 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - |
Frame-shift | ENST00000435396 | ENST00000406540 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - |
Frame-shift | ENST00000435396 | ENST00000464789 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - |
In-frame | ENST00000368019 | ENST00000406540 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - |
In-frame | ENST00000368019 | ENST00000464789 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - |
In-frame | ENST00000368020 | ENST00000406540 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - |
In-frame | ENST00000368020 | ENST00000464789 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - |
In-frame | ENST00000368021 | ENST00000337768 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - |
In-frame | ENST00000368021 | ENST00000405491 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - |
In-frame | ENST00000435396 | ENST00000337768 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - |
In-frame | ENST00000435396 | ENST00000405491 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000368020 | USF1 | chr1 | 161011907 | - | ENST00000406540 | SUPT7L | chr2 | 27884169 | - | 1969 | 391 | 1607 | 1966 | 120 |
ENST00000368020 | USF1 | chr1 | 161011907 | - | ENST00000464789 | SUPT7L | chr2 | 27884169 | - | 1951 | 391 | 1589 | 1948 | 120 |
ENST00000368021 | USF1 | chr1 | 161011907 | - | ENST00000337768 | SUPT7L | chr2 | 27884169 | - | 4299 | 481 | 3937 | 4296 | 120 |
ENST00000368021 | USF1 | chr1 | 161011907 | - | ENST00000405491 | SUPT7L | chr2 | 27884169 | - | 2048 | 481 | 1686 | 2045 | 120 |
ENST00000435396 | USF1 | chr1 | 161011907 | - | ENST00000337768 | SUPT7L | chr2 | 27884169 | - | 4258 | 440 | 3896 | 4255 | 120 |
ENST00000435396 | USF1 | chr1 | 161011907 | - | ENST00000405491 | SUPT7L | chr2 | 27884169 | - | 2007 | 440 | 1645 | 2004 | 120 |
ENST00000368019 | USF1 | chr1 | 161011907 | - | ENST00000406540 | SUPT7L | chr2 | 27884169 | - | 1938 | 360 | 1576 | 1935 | 120 |
ENST00000368019 | USF1 | chr1 | 161011907 | - | ENST00000464789 | SUPT7L | chr2 | 27884169 | - | 1920 | 360 | 1558 | 1917 | 120 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000368020 | ENST00000406540 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - | 0.1427008 | 0.85729915 |
ENST00000368020 | ENST00000464789 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - | 0.17822127 | 0.8217787 |
ENST00000368021 | ENST00000337768 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - | 0.06438833 | 0.93561167 |
ENST00000368021 | ENST00000405491 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - | 0.03491905 | 0.9650809 |
ENST00000435396 | ENST00000337768 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - | 0.058409326 | 0.9415907 |
ENST00000435396 | ENST00000405491 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - | 0.114553496 | 0.88544655 |
ENST00000368019 | ENST00000406540 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - | 0.102173105 | 0.8978269 |
ENST00000368019 | ENST00000464789 | USF1 | chr1 | 161011907 | - | SUPT7L | chr2 | 27884169 | - | 0.06685605 | 0.933144 |
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Fusion Genomic Features for USF1-SUPT7L |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
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Fusion Protein Features for USF1-SUPT7L |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr1:161011907/chr2:27884169) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | USF1 | chr1:161011907 | chr2:27884169 | ENST00000368020 | - | 5 | 11 | 199_254 | 92 | 311.0 | Domain | bHLH |
Hgene | USF1 | chr1:161011907 | chr2:27884169 | ENST00000368021 | - | 5 | 11 | 199_254 | 92 | 311.0 | Domain | bHLH |
Hgene | USF1 | chr1:161011907 | chr2:27884169 | ENST00000435396 | - | 5 | 11 | 199_254 | 33 | 252.0 | Domain | bHLH |
Hgene | USF1 | chr1:161011907 | chr2:27884169 | ENST00000368020 | - | 5 | 11 | 271_292 | 92 | 311.0 | Region | Note=Leucine-zipper |
Hgene | USF1 | chr1:161011907 | chr2:27884169 | ENST00000368021 | - | 5 | 11 | 271_292 | 92 | 311.0 | Region | Note=Leucine-zipper |
Hgene | USF1 | chr1:161011907 | chr2:27884169 | ENST00000435396 | - | 5 | 11 | 271_292 | 33 | 252.0 | Region | Note=Leucine-zipper |
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Fusion Gene Sequence for USF1-SUPT7L |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>97117_97117_1_USF1-SUPT7L_USF1_chr1_161011907_ENST00000368019_SUPT7L_chr2_27884169_ENST00000406540_length(transcript)=1938nt_BP=360nt ACTTAGCACTCAGGCCTGTGAATCAGGAGATACAAAGACCTCCAAAAAAGGACCAGTTCCTCGGATGTGCCCCCTCACAGAGAGATGAAG GGGCAGCAGAAAACAGCTGAAACGGAAGAGGGGACAGTGCAGATTCAGGAAGGTGCAGTGGCTACTGGGGAAGACCCAACCAGTGTGGCT ATTGCCAGCATCCAGTCAGCTGCCACCTTCCCTGACCCCAACGTCAAGTACGTCTTCCGAACTGAGAATGGGGGCCAGGTGATGTACAGG GTGATCCAGGTGTCTGAGGGGCAGCTGGATGGCCAAACTGAGGGAACTGGCGCCATCAGTGGCTACCCTGCCACTCAATCCATGACCCAG GTGCAGAGGTAAATGCTTCTCCTCTTTGGAATCTGGCCCATGTGAAAATGGAGCCTCAAGAAAGTGAAGAAGGCAATGTCTCTGGGCATG GTGTGCTGGGCAGTGATGTCTTCGAGGAGCCTATGTCAGGCATGAGTGAAGCTGGGATTCCTCAGAGCCCTGATGACTCAGATAGCAGCT ATGGTTCCCACTCCACTGACAGCCTCATGGGGTCCTCCCCTGTTTTCAACCAGCGCTGCAAGAAGAGGATGAGGAAAATATAAAAGGAAA AGAGGGAGATGTTTTGTCCAGACCTACTAGACCCAACAGAAAAGGTTTTTGTATTAGAATCTGTTTCCTTAAAAATTGATTTGACTCCTG TTCTTAAACACAAGTGGTTTTTCCTAATTCCAGAGGAACTGGACGTCACCAAACAAGGTTGCATTTTACTTTTGCATCCAGTTTTTATAG TTTTCCACAACCAAGCCACCCTTCACAGATAAAATATGATGCTGGCATGGCAATCAGACCAAAGCACTGTCCCCAATTGTTGTCTTAACT ATGACTAGACATGTTATACAGCCATTTATCTTGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTTAGATG TTTGCTAACTTCAAAACTGTGCTTGAATAGACTAATAATATATGCTCATATCAGATGTCAGTTTTCATTAGTAAGCAACTCTCTGAAGAA TATGAAAGGATTGTCAATCCTGAGAAGGCCACAGAGGACGCTAAACCTGTGAAGATCAAGGAGGAACCTGTGAGCGACATCACTTTTCCT GTCAGTGAGGAGCTGGAGGCTGACCTTGCTTCTGGAGACCAGTCACTGCCTATGGGAGTGCTTGGGGCTCAGAGCGAACGCTTCCCATCT AACCTGGAGGTTGAAGCTTCACCACAGGCTTCAATGGGAAAGGGGAACCTGTGACTGAACTCAGCTGGCACTCCTGTCGGCAGCTCCTCT ACCAGGCAGTGGCCACAATCCTGGCCCACGCGGGCTTTGACTGTGCTAATGAGAGTGTCCTGGAGACCCTAACTGATGTGGCACATGAGT ATTGCCTTAAGTTTACCAAGTTGCTGCGTTTTGCTGTGGACCGGGAGGCCCGGCTGGGACAGACTCCTTTTCCTGATGTGATGGAGCAGG TATTCCATGAAGTGGGTATTGGCAGTGTGCTCTCCCTCCAGAAGTTCTGGCAGCACCGCATCAAGGACTATCACAGTTACATGCTACAGT CCATGACCCACCCCTGCACCAACCCTCAGCCAACAAGCCGAAGCCCCCCACTATGCTGGACATCCCCTCAGAGCCATGTAGTCTCACCAT CCATACGATTCAGTTGATTCAGCACAACCGACGTCTTCGCAACCTTATTGCCACAGCTCAGGCCCAGAATCAGCAGCAGACAGAAGGTGT AAAAACTGAAGAGAGTGAACCTCTTCCCTCGTGCCCTGGGTCACCTCCTCTCCCTGATGACCTCCTGCCTTTAGATTGTAAGAATCCCAA >97117_97117_1_USF1-SUPT7L_USF1_chr1_161011907_ENST00000368019_SUPT7L_chr2_27884169_ENST00000406540_length(amino acids)=120AA_BP=14 MAAPHQGLSQLHATVHDPPLHQPSANKPKPPTMLDIPSEPCSLTIHTIQLIQHNRRLRNLIATAQAQNQQQTEGVKTEESEPLPSCPGSP -------------------------------------------------------------- >97117_97117_2_USF1-SUPT7L_USF1_chr1_161011907_ENST00000368019_SUPT7L_chr2_27884169_ENST00000464789_length(transcript)=1920nt_BP=360nt ACTTAGCACTCAGGCCTGTGAATCAGGAGATACAAAGACCTCCAAAAAAGGACCAGTTCCTCGGATGTGCCCCCTCACAGAGAGATGAAG GGGCAGCAGAAAACAGCTGAAACGGAAGAGGGGACAGTGCAGATTCAGGAAGGTGCAGTGGCTACTGGGGAAGACCCAACCAGTGTGGCT ATTGCCAGCATCCAGTCAGCTGCCACCTTCCCTGACCCCAACGTCAAGTACGTCTTCCGAACTGAGAATGGGGGCCAGGTGATGTACAGG GTGATCCAGGTGTCTGAGGGGCAGCTGGATGGCCAAACTGAGGGAACTGGCGCCATCAGTGGCTACCCTGCCACTCAATCCATGACCCAG GTGCAGAGGTAAATGCTTCTCCTCTTTGGAATCTGGCCCATGTGAAAATGGAGCCTCAAGAAAGTGAAGAAGGCAATGTCTCTGGGCATG GTGTGCTGGGCAGTGATGTCTTCGAGGAGCCTATGTCAGGCATGAGTGAAGCTGGGATTCCTCAGAGCCCTGATGACTCAGATAGCAGCT ATGGTTCCCACTCCACTGACAGCCTCATGGGGTCCTCCCCTGTTTTCAACCAGCGCTGCAAGAAGAGGATGAGGAAAATATAAAAGGAAA AGAGGGAGATGTTTTGTCCAGACCTACTAGACCCAACAGAAAAGGTTTTTGTATTAGAATCTGTTTCCTTAAAAATTGATTTGACTCCTG TTCTTAAACACAAGTGGTTTTTCCTAATTCCAGAGGAACTGGACGTCACCAAACAAGGTTGCATTTTACTTTTGCATCCAGTTTTTATAG TTTTCCACAACCAAGCCACCCTTCACAGATAAAATATGATGCTGGCATGGCAATCAGACCAAAGCACTGTCCCCAATTGTTGTCTTAACT ATGACTAGACATGTTATACAGCCATTTATCTTGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTTAGATG TTTGCTAACTTCAAAACTGTGCTTGAATAGACTAATAATATATGCTCAATTAGTAAGCAACTCTCTGAAGAATATGAAAGGATTGTCAAT CCTGAGAAGGCCACAGAGGACGCTAAACCTGTGAAGATCAAGGAGGAACCTGTGAGCGACATCACTTTTCCTGTCAGTGAGGAGCTGGAG GCTGACCTTGCTTCTGGAGACCAGTCACTGCCTATGGGAGTGCTTGGGGCTCAGAGCGAACGCTTCCCATCTAACCTGGAGGTTGAAGCT TCACCACAGGCTTCAATGGGAAAGGGGAACCTGTGACTGAACTCAGCTGGCACTCCTGTCGGCAGCTCCTCTACCAGGCAGTGGCCACAA TCCTGGCCCACGCGGGCTTTGACTGTGCTAATGAGAGTGTCCTGGAGACCCTAACTGATGTGGCACATGAGTATTGCCTTAAGTTTACCA AGTTGCTGCGTTTTGCTGTGGACCGGGAGGCCCGGCTGGGACAGACTCCTTTTCCTGATGTGATGGAGCAGGTATTCCATGAAGTGGGTA TTGGCAGTGTGCTCTCCCTCCAGAAGTTCTGGCAGCACCGCATCAAGGACTATCACAGTTACATGCTACAGTCCATGACCCACCCCTGCA CCAACCCTCAGCCAACAAGCCGAAGCCCCCCACTATGCTGGACATCCCCTCAGAGCCATGTAGTCTCACCATCCATACGATTCAGTTGAT TCAGCACAACCGACGTCTTCGCAACCTTATTGCCACAGCTCAGGCCCAGAATCAGCAGCAGACAGAAGGTGTAAAAACTGAAGAGAGTGA ACCTCTTCCCTCGTGCCCTGGGTCACCTCCTCTCCCTGATGACCTCCTGCCTTTAGATTGTAAGAATCCCAATGCACCATTCCAGATCCG >97117_97117_2_USF1-SUPT7L_USF1_chr1_161011907_ENST00000368019_SUPT7L_chr2_27884169_ENST00000464789_length(amino acids)=120AA_BP=14 MAAPHQGLSQLHATVHDPPLHQPSANKPKPPTMLDIPSEPCSLTIHTIQLIQHNRRLRNLIATAQAQNQQQTEGVKTEESEPLPSCPGSP -------------------------------------------------------------- >97117_97117_3_USF1-SUPT7L_USF1_chr1_161011907_ENST00000368020_SUPT7L_chr2_27884169_ENST00000406540_length(transcript)=1969nt_BP=391nt TCCATTGAAAATTTTCCTTGGATAGGAAAGGACTTAGCACTCAGGCCTGTGAATCAGGAGATACAAAGACCTCCAAAAAAGGACCAGTTC CTCGGATGTGCCCCCTCACAGAGAGATGAAGGGGCAGCAGAAAACAGCTGAAACGGAAGAGGGGACAGTGCAGATTCAGGAAGGTGCAGT GGCTACTGGGGAAGACCCAACCAGTGTGGCTATTGCCAGCATCCAGTCAGCTGCCACCTTCCCTGACCCCAACGTCAAGTACGTCTTCCG AACTGAGAATGGGGGCCAGGTGATGTACAGGGTGATCCAGGTGTCTGAGGGGCAGCTGGATGGCCAAACTGAGGGAACTGGCGCCATCAG TGGCTACCCTGCCACTCAATCCATGACCCAGGTGCAGAGGTAAATGCTTCTCCTCTTTGGAATCTGGCCCATGTGAAAATGGAGCCTCAA GAAAGTGAAGAAGGCAATGTCTCTGGGCATGGTGTGCTGGGCAGTGATGTCTTCGAGGAGCCTATGTCAGGCATGAGTGAAGCTGGGATT CCTCAGAGCCCTGATGACTCAGATAGCAGCTATGGTTCCCACTCCACTGACAGCCTCATGGGGTCCTCCCCTGTTTTCAACCAGCGCTGC AAGAAGAGGATGAGGAAAATATAAAAGGAAAAGAGGGAGATGTTTTGTCCAGACCTACTAGACCCAACAGAAAAGGTTTTTGTATTAGAA TCTGTTTCCTTAAAAATTGATTTGACTCCTGTTCTTAAACACAAGTGGTTTTTCCTAATTCCAGAGGAACTGGACGTCACCAAACAAGGT TGCATTTTACTTTTGCATCCAGTTTTTATAGTTTTCCACAACCAAGCCACCCTTCACAGATAAAATATGATGCTGGCATGGCAATCAGAC CAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTATCTTGTACAACTGAGAAGAATCATACTTTGA CCTACCTTGTAGAGATGTGAGGATTTAGATGTTTGCTAACTTCAAAACTGTGCTTGAATAGACTAATAATATATGCTCATATCAGATGTC AGTTTTCATTAGTAAGCAACTCTCTGAAGAATATGAAAGGATTGTCAATCCTGAGAAGGCCACAGAGGACGCTAAACCTGTGAAGATCAA GGAGGAACCTGTGAGCGACATCACTTTTCCTGTCAGTGAGGAGCTGGAGGCTGACCTTGCTTCTGGAGACCAGTCACTGCCTATGGGAGT GCTTGGGGCTCAGAGCGAACGCTTCCCATCTAACCTGGAGGTTGAAGCTTCACCACAGGCTTCAATGGGAAAGGGGAACCTGTGACTGAA CTCAGCTGGCACTCCTGTCGGCAGCTCCTCTACCAGGCAGTGGCCACAATCCTGGCCCACGCGGGCTTTGACTGTGCTAATGAGAGTGTC CTGGAGACCCTAACTGATGTGGCACATGAGTATTGCCTTAAGTTTACCAAGTTGCTGCGTTTTGCTGTGGACCGGGAGGCCCGGCTGGGA CAGACTCCTTTTCCTGATGTGATGGAGCAGGTATTCCATGAAGTGGGTATTGGCAGTGTGCTCTCCCTCCAGAAGTTCTGGCAGCACCGC ATCAAGGACTATCACAGTTACATGCTACAGTCCATGACCCACCCCTGCACCAACCCTCAGCCAACAAGCCGAAGCCCCCCACTATGCTGG ACATCCCCTCAGAGCCATGTAGTCTCACCATCCATACGATTCAGTTGATTCAGCACAACCGACGTCTTCGCAACCTTATTGCCACAGCTC AGGCCCAGAATCAGCAGCAGACAGAAGGTGTAAAAACTGAAGAGAGTGAACCTCTTCCCTCGTGCCCTGGGTCACCTCCTCTCCCTGATG >97117_97117_3_USF1-SUPT7L_USF1_chr1_161011907_ENST00000368020_SUPT7L_chr2_27884169_ENST00000406540_length(amino acids)=120AA_BP=14 MAAPHQGLSQLHATVHDPPLHQPSANKPKPPTMLDIPSEPCSLTIHTIQLIQHNRRLRNLIATAQAQNQQQTEGVKTEESEPLPSCPGSP -------------------------------------------------------------- >97117_97117_4_USF1-SUPT7L_USF1_chr1_161011907_ENST00000368020_SUPT7L_chr2_27884169_ENST00000464789_length(transcript)=1951nt_BP=391nt TCCATTGAAAATTTTCCTTGGATAGGAAAGGACTTAGCACTCAGGCCTGTGAATCAGGAGATACAAAGACCTCCAAAAAAGGACCAGTTC CTCGGATGTGCCCCCTCACAGAGAGATGAAGGGGCAGCAGAAAACAGCTGAAACGGAAGAGGGGACAGTGCAGATTCAGGAAGGTGCAGT GGCTACTGGGGAAGACCCAACCAGTGTGGCTATTGCCAGCATCCAGTCAGCTGCCACCTTCCCTGACCCCAACGTCAAGTACGTCTTCCG AACTGAGAATGGGGGCCAGGTGATGTACAGGGTGATCCAGGTGTCTGAGGGGCAGCTGGATGGCCAAACTGAGGGAACTGGCGCCATCAG TGGCTACCCTGCCACTCAATCCATGACCCAGGTGCAGAGGTAAATGCTTCTCCTCTTTGGAATCTGGCCCATGTGAAAATGGAGCCTCAA GAAAGTGAAGAAGGCAATGTCTCTGGGCATGGTGTGCTGGGCAGTGATGTCTTCGAGGAGCCTATGTCAGGCATGAGTGAAGCTGGGATT CCTCAGAGCCCTGATGACTCAGATAGCAGCTATGGTTCCCACTCCACTGACAGCCTCATGGGGTCCTCCCCTGTTTTCAACCAGCGCTGC AAGAAGAGGATGAGGAAAATATAAAAGGAAAAGAGGGAGATGTTTTGTCCAGACCTACTAGACCCAACAGAAAAGGTTTTTGTATTAGAA TCTGTTTCCTTAAAAATTGATTTGACTCCTGTTCTTAAACACAAGTGGTTTTTCCTAATTCCAGAGGAACTGGACGTCACCAAACAAGGT TGCATTTTACTTTTGCATCCAGTTTTTATAGTTTTCCACAACCAAGCCACCCTTCACAGATAAAATATGATGCTGGCATGGCAATCAGAC CAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTATCTTGTACAACTGAGAAGAATCATACTTTGA CCTACCTTGTAGAGATGTGAGGATTTAGATGTTTGCTAACTTCAAAACTGTGCTTGAATAGACTAATAATATATGCTCAATTAGTAAGCA ACTCTCTGAAGAATATGAAAGGATTGTCAATCCTGAGAAGGCCACAGAGGACGCTAAACCTGTGAAGATCAAGGAGGAACCTGTGAGCGA CATCACTTTTCCTGTCAGTGAGGAGCTGGAGGCTGACCTTGCTTCTGGAGACCAGTCACTGCCTATGGGAGTGCTTGGGGCTCAGAGCGA ACGCTTCCCATCTAACCTGGAGGTTGAAGCTTCACCACAGGCTTCAATGGGAAAGGGGAACCTGTGACTGAACTCAGCTGGCACTCCTGT CGGCAGCTCCTCTACCAGGCAGTGGCCACAATCCTGGCCCACGCGGGCTTTGACTGTGCTAATGAGAGTGTCCTGGAGACCCTAACTGAT GTGGCACATGAGTATTGCCTTAAGTTTACCAAGTTGCTGCGTTTTGCTGTGGACCGGGAGGCCCGGCTGGGACAGACTCCTTTTCCTGAT GTGATGGAGCAGGTATTCCATGAAGTGGGTATTGGCAGTGTGCTCTCCCTCCAGAAGTTCTGGCAGCACCGCATCAAGGACTATCACAGT TACATGCTACAGTCCATGACCCACCCCTGCACCAACCCTCAGCCAACAAGCCGAAGCCCCCCACTATGCTGGACATCCCCTCAGAGCCAT GTAGTCTCACCATCCATACGATTCAGTTGATTCAGCACAACCGACGTCTTCGCAACCTTATTGCCACAGCTCAGGCCCAGAATCAGCAGC AGACAGAAGGTGTAAAAACTGAAGAGAGTGAACCTCTTCCCTCGTGCCCTGGGTCACCTCCTCTCCCTGATGACCTCCTGCCTTTAGATT >97117_97117_4_USF1-SUPT7L_USF1_chr1_161011907_ENST00000368020_SUPT7L_chr2_27884169_ENST00000464789_length(amino acids)=120AA_BP=14 MAAPHQGLSQLHATVHDPPLHQPSANKPKPPTMLDIPSEPCSLTIHTIQLIQHNRRLRNLIATAQAQNQQQTEGVKTEESEPLPSCPGSP -------------------------------------------------------------- >97117_97117_5_USF1-SUPT7L_USF1_chr1_161011907_ENST00000368021_SUPT7L_chr2_27884169_ENST00000337768_length(transcript)=4299nt_BP=481nt GCCCCTCACCAACATGGCCGCGGGCTGGAAGTGCGCATGAGCAGCTGTCTATGGAGATACCTAGGCCGGGAGAGGGAGAACACAGTTGGA GAAAATCGGCAGCTGAGACGGCCTTGGCCGGACTTAGCACTCAGGCCTGTGAATCAGGAGATACAAAGACCTCCAAAAAAGGACCAGTTC CTCGGATGTGCCCCCTCACAGAGAGATGAAGGGGCAGCAGAAAACAGCTGAAACGGAAGAGGGGACAGTGCAGATTCAGGAAGGTGCAGT GGCTACTGGGGAAGACCCAACCAGTGTGGCTATTGCCAGCATCCAGTCAGCTGCCACCTTCCCTGACCCCAACGTCAAGTACGTCTTCCG AACTGAGAATGGGGGCCAGGTGATGTACAGGGTGATCCAGGTGTCTGAGGGGCAGCTGGATGGCCAAACTGAGGGAACTGGCGCCATCAG TGGCTACCCTGCCACTCAATCCATGACCCAGGTGCAGAGGTAAATGCTTCTCCTCTTTGGAATCTGGCCCATGTGAAAATGGAGCCTCAA GAAAGTGAAGAAGGCAATGTCTCTGGGCATGGTGTGCTGGGCAGTGATGTCTTCGAGGAGCCTATGTCAGGCATGAGTGAAGCTGGGATT CCTCAGAGCCCTGATGACTCAGATAGCAGCTATGGTTCCCACTCCACTGACAGCCTCATGGGGTCCTCCCCTGTTTTCAACCAGCGCTGC AAGAAGAGGATGAGGAAAATATAAAAGGAAAAGAGGGAGATGTTTTGTCCAGACCTACTAGACCCAACAGAAAAGGTTTTTGTATTAGAA TCTGTTTCCTTAAAAATTGATTTGACTCCTGTTCTTAAACACAAGTGGTTTTTCCTAATTCCAGAGGAACTGGACGTCACCAAACAAGGT TGCATTTTACTTTTGCATCCAGTTTTTATAGTTTTCCACAACCAAGCCACCCTTCACAGATAAAATATGATGCTGGCATGGCAATCAGAC CAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTATCTTGTACAACTGAGAAGAATCATACTTTGA CCTACCTTGTAGAGATGTGAGGATTTAGATGTTTGCTAACTTCAAAACTGTGCTTGAATAGACTAATAATATATGCTCATATCAGATGTC AGTTTTCATTTAACTTGATTCATTTTTGGCTCAGGTCATTGGGAACCCATTACTAATACCTAACAGGAAATAGCTAAACACAACACACCT TATCTATTAGTCACCTTCTTAAAACTGTTTTTGCTACTTTTGAAGTGTCTTATTTATAAGATCAGAGGTCTGACACCTTTTTTGCTTAGA CAGCTCTCTATCTCATCCATTTATTTTCTTCTCTAGACTTACTCCATCTCTCCTCATCCTTTTGCCTTTGTTATTTCTGCTCGGACTCAC ATACTTTCACCATATACATATTTTCAATTGTTTCTTTCCTTTTCTCCTTTGTGAGCAAAGCAAACAAGTACTGTCCAAGGACAGCCTTGT GCATATTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACAGCAGTCCATTAAGCACACTTTGCTGCTTCTACTGTAAAGGCAGCCTTTA AAACATAGCAATATGCACCTTTCAACTTTACATCATGTCCTGAACAACATCACTGTGGTTACTCATCCATCAGACTATCTGTATATATAA GTACTGAATCAGTATTTATTAAGTAAATGATGTAGCACTGTAGTGATTAGGAATCATTAGCAAATGTGTTGCTTCATGCCTTGGTGATGG ATGCCAGCATGTTAAACTGCTGAAGTTTGATTTTCTGATGCAAAATATATCTTGTAAAATTTAGACCACTCCTTTAATGCAGACCAAAAT AAGGCACAGCTTTAATTCATTATTGAATGCCTTAAATGTCCCAGGTATTGAGAATAAATGAATATGATACAAATGAGGTTATAGTTTAAC ATATAATTTTAAATTTGCCAATTGTAACTCTTTAGCACATTTCTCTAAACCCTTTCTGTCACAGTCTTTTTTTTAATTTATTTATTTATT TATTTATTTTTGAGATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGTGCAATTTCGACTCACTGCAACCTCTGCCTCCCAGGT TCAAGCGATTCTCCTGCCTCAGCCACCTGAGTAGCTGGGATTACACGCACATGCCACCACACCCAGCTAATTTTTGCATTTTTAGTAGAG ATGAGGTTTCACCGTGTTGGCCAGGCTGGTCTCAAAACTCCTGACCTCAAGTGATCTGCCCGCCTCGGGCTCCCAAAGTGCTGGGATTAC AGGCGTGAGCCACTGCACCTGGCCTCTGTTGCAGTCTTATCTTCATTTTCCTTTGTTTATAATGAAAGTGGCGATTAGGCAGTTAGTTTC CATAAAGTGGCCGTATGGGAATTTAGTTCATTCATCCAGCAAACATTGAGTACCAATTATTTGCTAGGTCCTGTGCAAGGAATACAAAAA TGATTAAGACTTCTTCCTTACCCTTTTGGAGCTTGAAGCATAAGGAAGACAAGTTATTCTGTAAGGAAGATAAAGCATTCAAAAGTACTA CAGAGAAAAACCAAGTATGCTTGAGTTTTGCGAATGTTCTCCTCTTAAAGAATAGCTTCAAATTTTGAGACCAGTGGTTCCCACTAAGTA TAGAACATTAAAATTAATACTTTATAATAAAACACTTTTATTGCTGCAGAATGTTAAACTGCATAACAGGCACCAGATGGTCAAGACGAG GGAAATATGAGAAGGCAAATGATGTGAGGATTAGTATCTTGAGATTCACCTGGTCTGGAATTATGTCATAGGCTACTATGCATCAGAATC ACATGGAGGGCTTTCTAAAACAGACTGCTCAGCCCACCCCCAGGGTTTCTGAGTTCATAGGTTATAAGAGGTAAGTTGAACAATTCCCCA GATGATGCTGATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAGAAATGTACT GTTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACT TTGCGAAAATCACCAAGGAGACTTTGCATTAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTGCACGTGG GAAACTTTAGTAAAATATCACCTCCTTATTGAGACAAGTTTGGACATCTGGCCTTAAGCCTCTGTTGAACAGGAGAAGTGAAGCTGTTTG CAATTATATAATTTTCTAATTTGAAATCATGACAAGCAGTCTTAGAACAAAGTTAAAATTAAAAAGTCTTTATCCAAGTCACCAATGATT AGTAAGCAACTCTCTGAAGAATATGAAAGGATTGTCAATCCTGAGAAGGCCACAGAGGACGCTAAACCTGTGAAGATCAAGGAGGAACCT GTGAGCGACATCACTTTTCCTGTCAGTGAGGAGCTGGAGGCTGACCTTGCTTCTGGAGACCAGTCACTGCCTATGGGAGTGCTTGGGGCT CAGAGCGAACGCTTCCCATCTAACCTGGAGGTTGAAGCTTCACCACAGGCTTCAATGGGAAAGGGGAACCTGTGACTGAACTCAGCTGGC ACTCCTGTCGGCAGCTCCTCTACCAGGCAGTGGCCACAATCCTGGCCCACGCGGGCTTTGACTGTGCTAATGAGAGTGTCCTGGAGACCC TAACTGATGTGGCACATGAGTATTGCCTTAAGTTTACCAAGTTGCTGCGTTTTGCTGTGGACCGGGAGGCCCGGCTGGGACAGACTCCTT TTCCTGATGTGATGGAGCAGGTATTCCATGAAGTGGGTATTGGCAGTGTGCTCTCCCTCCAGAAGTTCTGGCAGCACCGCATCAAGGACT ATCACAGTTACATGCTACAGTCCATGACCCACCCCTGCACCAACCCTCAGCCAACAAGCCGAAGCCCCCCACTATGCTGGACATCCCCTC AGAGCCATGTAGTCTCACCATCCATACGATTCAGTTGATTCAGCACAACCGACGTCTTCGCAACCTTATTGCCACAGCTCAGGCCCAGAA TCAGCAGCAGACAGAAGGTGTAAAAACTGAAGAGAGTGAACCTCTTCCCTCGTGCCCTGGGTCACCTCCTCTCCCTGATGACCTCCTGCC >97117_97117_5_USF1-SUPT7L_USF1_chr1_161011907_ENST00000368021_SUPT7L_chr2_27884169_ENST00000337768_length(amino acids)=120AA_BP=14 MAAPHQGLSQLHATVHDPPLHQPSANKPKPPTMLDIPSEPCSLTIHTIQLIQHNRRLRNLIATAQAQNQQQTEGVKTEESEPLPSCPGSP -------------------------------------------------------------- >97117_97117_6_USF1-SUPT7L_USF1_chr1_161011907_ENST00000368021_SUPT7L_chr2_27884169_ENST00000405491_length(transcript)=2048nt_BP=481nt GCCCCTCACCAACATGGCCGCGGGCTGGAAGTGCGCATGAGCAGCTGTCTATGGAGATACCTAGGCCGGGAGAGGGAGAACACAGTTGGA GAAAATCGGCAGCTGAGACGGCCTTGGCCGGACTTAGCACTCAGGCCTGTGAATCAGGAGATACAAAGACCTCCAAAAAAGGACCAGTTC CTCGGATGTGCCCCCTCACAGAGAGATGAAGGGGCAGCAGAAAACAGCTGAAACGGAAGAGGGGACAGTGCAGATTCAGGAAGGTGCAGT GGCTACTGGGGAAGACCCAACCAGTGTGGCTATTGCCAGCATCCAGTCAGCTGCCACCTTCCCTGACCCCAACGTCAAGTACGTCTTCCG AACTGAGAATGGGGGCCAGGTGATGTACAGGGTGATCCAGGTGTCTGAGGGGCAGCTGGATGGCCAAACTGAGGGAACTGGCGCCATCAG TGGCTACCCTGCCACTCAATCCATGACCCAGGTGCAGAGGTAAATGCTTCTCCTCTTTGGAATCTGGCCCATGTGAAAATGGAGCCTCAA GAAAGTGAAGAAGGCAATGTCTCTGGGCATGGTGTGCTGGGCAGTGATGTCTTCGAGGAGCCTATGTCAGGCATGAGTGAAGCTGGGATT CCTCAGAGCCCTGATGACTCAGATAGCAGCTATGGTTCCCACTCCACTGACAGCCTCATGGGGTCCTCCCCTGTTTTCAACCAGCGCTGC AAGAAGAGGATGAGGAAAATATAAAAGGAAAAGAGGGAGATGTTTTGTCCAGACCTACTAGACCCAACAGAAAAGGTTTTTGTATTAGAA TCTGTTTCCTTAAAAATTGATTTGACTCCTGTTCTTAAACACAAGTGGTTTTTCCTAATTCCAGAGGAACTGGACGTCACCAAACAAGGT TGCATTTTACTTTTGCATCCAGTTTTTATAGTTTTCCACAACCAAGCCACCCTTCACAGATAAAATATGATGCTGGCATGGCAATCAGAC CAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTATCTTGTACAACTGAGAAGAATCATACTTTGA CCTACCTTGTAGAGATGTGAGGATTTAGATGTTTGCTAACTTCAAAACTGTGCTTGAATAGACTAATAATATATGCTCATATCAGAATTA GTAAGCAACTCTCTGAAGAATATGAAAGGATTGTCAATCCTGAGAAGGCCACAGAGGACGCTAAACCTGTGAAGATCAAGGAGGAACCTG TGAGCGACATCACTTTTCCTGTCAGTGAGGAGCTGGAGGCTGACCTTGCTTCTGGAGACCAGTCACTGCCTATGGGAGTGCTTGGGGCTC AGAGCGAACGCTTCCCATCTAACCTGGAGGTTGAAGCTTCACCACAGGCTTCAATGGGAAAGGGGAACCTGTGACTGAACTCAGCTGGCA CTCCTGTCGGCAGCTCCTCTACCAGGCAGTGGCCACAATCCTGGCCCACGCGGGCTTTGACTGTGCTAATGAGAGTGTCCTGGAGACCCT AACTGATGTGGCACATGAGTATTGCCTTAAGTTTACCAAGTTGCTGCGTTTTGCTGTGGACCGGGAGGCCCGGCTGGGACAGACTCCTTT TCCTGATGTGATGGAGCAGGTATTCCATGAAGTGGGTATTGGCAGTGTGCTCTCCCTCCAGAAGTTCTGGCAGCACCGCATCAAGGACTA TCACAGTTACATGCTACAGTCCATGACCCACCCCTGCACCAACCCTCAGCCAACAAGCCGAAGCCCCCCACTATGCTGGACATCCCCTCA GAGCCATGTAGTCTCACCATCCATACGATTCAGTTGATTCAGCACAACCGACGTCTTCGCAACCTTATTGCCACAGCTCAGGCCCAGAAT CAGCAGCAGACAGAAGGTGTAAAAACTGAAGAGAGTGAACCTCTTCCCTCGTGCCCTGGGTCACCTCCTCTCCCTGATGACCTCCTGCCT >97117_97117_6_USF1-SUPT7L_USF1_chr1_161011907_ENST00000368021_SUPT7L_chr2_27884169_ENST00000405491_length(amino acids)=120AA_BP=14 MAAPHQGLSQLHATVHDPPLHQPSANKPKPPTMLDIPSEPCSLTIHTIQLIQHNRRLRNLIATAQAQNQQQTEGVKTEESEPLPSCPGSP -------------------------------------------------------------- >97117_97117_7_USF1-SUPT7L_USF1_chr1_161011907_ENST00000435396_SUPT7L_chr2_27884169_ENST00000337768_length(transcript)=4258nt_BP=440nt AACATGGCCGCGGGCTGGAAGTGCGCATGAGCAGCTGTCTATGGAGATACCTAGGCCGGGAGAGGGAGAACACAGTTGGAGAAAATCGGC AGCTGAGACGGCCTTGGCCGGACTTAGCACTCAGGCCTGTGAATCAGGAGATACAAAGACCTCCAAAAAAGGACCAGTTCCTCGGATGTG CCCCCTCACAGAGAGATGAAGGGGCAGCAGAAAACAGCTGAAACGGAAGAGGGGACAGTGCAGATTCAGGAAGGTGCAGTGGCTACTGGG GAAGACCCAACCAGTGTGGCTATTGCCAGCATCCAGTCAGCTGCCACCTTCCCTGACCCCAACGTCAAGTGATGTACAGGGTGATCCAGG TGTCTGAGGGGCAGCTGGATGGCCAAACTGAGGGAACTGGCGCCATCAGTGGCTACCCTGCCACTCAATCCATGACCCAGGTGCAGAGGT AAATGCTTCTCCTCTTTGGAATCTGGCCCATGTGAAAATGGAGCCTCAAGAAAGTGAAGAAGGCAATGTCTCTGGGCATGGTGTGCTGGG CAGTGATGTCTTCGAGGAGCCTATGTCAGGCATGAGTGAAGCTGGGATTCCTCAGAGCCCTGATGACTCAGATAGCAGCTATGGTTCCCA CTCCACTGACAGCCTCATGGGGTCCTCCCCTGTTTTCAACCAGCGCTGCAAGAAGAGGATGAGGAAAATATAAAAGGAAAAGAGGGAGAT GTTTTGTCCAGACCTACTAGACCCAACAGAAAAGGTTTTTGTATTAGAATCTGTTTCCTTAAAAATTGATTTGACTCCTGTTCTTAAACA CAAGTGGTTTTTCCTAATTCCAGAGGAACTGGACGTCACCAAACAAGGTTGCATTTTACTTTTGCATCCAGTTTTTATAGTTTTCCACAA CCAAGCCACCCTTCACAGATAAAATATGATGCTGGCATGGCAATCAGACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGAC ATGTTATACAGCCATTTATCTTGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTTAGATGTTTGCTAACT TCAAAACTGTGCTTGAATAGACTAATAATATATGCTCATATCAGATGTCAGTTTTCATTTAACTTGATTCATTTTTGGCTCAGGTCATTG GGAACCCATTACTAATACCTAACAGGAAATAGCTAAACACAACACACCTTATCTATTAGTCACCTTCTTAAAACTGTTTTTGCTACTTTT GAAGTGTCTTATTTATAAGATCAGAGGTCTGACACCTTTTTTGCTTAGACAGCTCTCTATCTCATCCATTTATTTTCTTCTCTAGACTTA CTCCATCTCTCCTCATCCTTTTGCCTTTGTTATTTCTGCTCGGACTCACATACTTTCACCATATACATATTTTCAATTGTTTCTTTCCTT TTCTCCTTTGTGAGCAAAGCAAACAAGTACTGTCCAAGGACAGCCTTGTGCATATTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACA GCAGTCCATTAAGCACACTTTGCTGCTTCTACTGTAAAGGCAGCCTTTAAAACATAGCAATATGCACCTTTCAACTTTACATCATGTCCT GAACAACATCACTGTGGTTACTCATCCATCAGACTATCTGTATATATAAGTACTGAATCAGTATTTATTAAGTAAATGATGTAGCACTGT AGTGATTAGGAATCATTAGCAAATGTGTTGCTTCATGCCTTGGTGATGGATGCCAGCATGTTAAACTGCTGAAGTTTGATTTTCTGATGC AAAATATATCTTGTAAAATTTAGACCACTCCTTTAATGCAGACCAAAATAAGGCACAGCTTTAATTCATTATTGAATGCCTTAAATGTCC CAGGTATTGAGAATAAATGAATATGATACAAATGAGGTTATAGTTTAACATATAATTTTAAATTTGCCAATTGTAACTCTTTAGCACATT TCTCTAAACCCTTTCTGTCACAGTCTTTTTTTTAATTTATTTATTTATTTATTTATTTTTGAGATGGAGTCTTGCTCTGTCACCCAGGCT GGAGTGCAATGGTGCAATTTCGACTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCACCTGAGTAGCTGGGAT TACACGCACATGCCACCACACCCAGCTAATTTTTGCATTTTTAGTAGAGATGAGGTTTCACCGTGTTGGCCAGGCTGGTCTCAAAACTCC TGACCTCAAGTGATCTGCCCGCCTCGGGCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCACCTGGCCTCTGTTGCAGTCTTATC TTCATTTTCCTTTGTTTATAATGAAAGTGGCGATTAGGCAGTTAGTTTCCATAAAGTGGCCGTATGGGAATTTAGTTCATTCATCCAGCA AACATTGAGTACCAATTATTTGCTAGGTCCTGTGCAAGGAATACAAAAATGATTAAGACTTCTTCCTTACCCTTTTGGAGCTTGAAGCAT AAGGAAGACAAGTTATTCTGTAAGGAAGATAAAGCATTCAAAAGTACTACAGAGAAAAACCAAGTATGCTTGAGTTTTGCGAATGTTCTC CTCTTAAAGAATAGCTTCAAATTTTGAGACCAGTGGTTCCCACTAAGTATAGAACATTAAAATTAATACTTTATAATAAAACACTTTTAT TGCTGCAGAATGTTAAACTGCATAACAGGCACCAGATGGTCAAGACGAGGGAAATATGAGAAGGCAAATGATGTGAGGATTAGTATCTTG AGATTCACCTGGTCTGGAATTATGTCATAGGCTACTATGCATCAGAATCACATGGAGGGCTTTCTAAAACAGACTGCTCAGCCCACCCCC AGGGTTTCTGAGTTCATAGGTTATAAGAGGTAAGTTGAACAATTCCCCAGATGATGCTGATGCTCCTGGTCCACAATGTGAGAACCACTA AGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAGAAATGTACTGTTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTT ATAAGGGCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATCACCAAGGAGACTTTGCATTAAGTTCAGAGT ACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTGCACGTGGGAAACTTTAGTAAAATATCACCTCCTTATTGAGACAAGTTT GGACATCTGGCCTTAAGCCTCTGTTGAACAGGAGAAGTGAAGCTGTTTGCAATTATATAATTTTCTAATTTGAAATCATGACAAGCAGTC TTAGAACAAAGTTAAAATTAAAAAGTCTTTATCCAAGTCACCAATGATTAGTAAGCAACTCTCTGAAGAATATGAAAGGATTGTCAATCC TGAGAAGGCCACAGAGGACGCTAAACCTGTGAAGATCAAGGAGGAACCTGTGAGCGACATCACTTTTCCTGTCAGTGAGGAGCTGGAGGC TGACCTTGCTTCTGGAGACCAGTCACTGCCTATGGGAGTGCTTGGGGCTCAGAGCGAACGCTTCCCATCTAACCTGGAGGTTGAAGCTTC ACCACAGGCTTCAATGGGAAAGGGGAACCTGTGACTGAACTCAGCTGGCACTCCTGTCGGCAGCTCCTCTACCAGGCAGTGGCCACAATC CTGGCCCACGCGGGCTTTGACTGTGCTAATGAGAGTGTCCTGGAGACCCTAACTGATGTGGCACATGAGTATTGCCTTAAGTTTACCAAG TTGCTGCGTTTTGCTGTGGACCGGGAGGCCCGGCTGGGACAGACTCCTTTTCCTGATGTGATGGAGCAGGTATTCCATGAAGTGGGTATT GGCAGTGTGCTCTCCCTCCAGAAGTTCTGGCAGCACCGCATCAAGGACTATCACAGTTACATGCTACAGTCCATGACCCACCCCTGCACC AACCCTCAGCCAACAAGCCGAAGCCCCCCACTATGCTGGACATCCCCTCAGAGCCATGTAGTCTCACCATCCATACGATTCAGTTGATTC AGCACAACCGACGTCTTCGCAACCTTATTGCCACAGCTCAGGCCCAGAATCAGCAGCAGACAGAAGGTGTAAAAACTGAAGAGAGTGAAC CTCTTCCCTCGTGCCCTGGGTCACCTCCTCTCCCTGATGACCTCCTGCCTTTAGATTGTAAGAATCCCAATGCACCATTCCAGATCCGGC >97117_97117_7_USF1-SUPT7L_USF1_chr1_161011907_ENST00000435396_SUPT7L_chr2_27884169_ENST00000337768_length(amino acids)=120AA_BP=14 MAAPHQGLSQLHATVHDPPLHQPSANKPKPPTMLDIPSEPCSLTIHTIQLIQHNRRLRNLIATAQAQNQQQTEGVKTEESEPLPSCPGSP -------------------------------------------------------------- >97117_97117_8_USF1-SUPT7L_USF1_chr1_161011907_ENST00000435396_SUPT7L_chr2_27884169_ENST00000405491_length(transcript)=2007nt_BP=440nt AACATGGCCGCGGGCTGGAAGTGCGCATGAGCAGCTGTCTATGGAGATACCTAGGCCGGGAGAGGGAGAACACAGTTGGAGAAAATCGGC AGCTGAGACGGCCTTGGCCGGACTTAGCACTCAGGCCTGTGAATCAGGAGATACAAAGACCTCCAAAAAAGGACCAGTTCCTCGGATGTG CCCCCTCACAGAGAGATGAAGGGGCAGCAGAAAACAGCTGAAACGGAAGAGGGGACAGTGCAGATTCAGGAAGGTGCAGTGGCTACTGGG GAAGACCCAACCAGTGTGGCTATTGCCAGCATCCAGTCAGCTGCCACCTTCCCTGACCCCAACGTCAAGTGATGTACAGGGTGATCCAGG TGTCTGAGGGGCAGCTGGATGGCCAAACTGAGGGAACTGGCGCCATCAGTGGCTACCCTGCCACTCAATCCATGACCCAGGTGCAGAGGT AAATGCTTCTCCTCTTTGGAATCTGGCCCATGTGAAAATGGAGCCTCAAGAAAGTGAAGAAGGCAATGTCTCTGGGCATGGTGTGCTGGG CAGTGATGTCTTCGAGGAGCCTATGTCAGGCATGAGTGAAGCTGGGATTCCTCAGAGCCCTGATGACTCAGATAGCAGCTATGGTTCCCA CTCCACTGACAGCCTCATGGGGTCCTCCCCTGTTTTCAACCAGCGCTGCAAGAAGAGGATGAGGAAAATATAAAAGGAAAAGAGGGAGAT GTTTTGTCCAGACCTACTAGACCCAACAGAAAAGGTTTTTGTATTAGAATCTGTTTCCTTAAAAATTGATTTGACTCCTGTTCTTAAACA CAAGTGGTTTTTCCTAATTCCAGAGGAACTGGACGTCACCAAACAAGGTTGCATTTTACTTTTGCATCCAGTTTTTATAGTTTTCCACAA CCAAGCCACCCTTCACAGATAAAATATGATGCTGGCATGGCAATCAGACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGAC ATGTTATACAGCCATTTATCTTGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTTAGATGTTTGCTAACT TCAAAACTGTGCTTGAATAGACTAATAATATATGCTCATATCAGAATTAGTAAGCAACTCTCTGAAGAATATGAAAGGATTGTCAATCCT GAGAAGGCCACAGAGGACGCTAAACCTGTGAAGATCAAGGAGGAACCTGTGAGCGACATCACTTTTCCTGTCAGTGAGGAGCTGGAGGCT GACCTTGCTTCTGGAGACCAGTCACTGCCTATGGGAGTGCTTGGGGCTCAGAGCGAACGCTTCCCATCTAACCTGGAGGTTGAAGCTTCA CCACAGGCTTCAATGGGAAAGGGGAACCTGTGACTGAACTCAGCTGGCACTCCTGTCGGCAGCTCCTCTACCAGGCAGTGGCCACAATCC TGGCCCACGCGGGCTTTGACTGTGCTAATGAGAGTGTCCTGGAGACCCTAACTGATGTGGCACATGAGTATTGCCTTAAGTTTACCAAGT TGCTGCGTTTTGCTGTGGACCGGGAGGCCCGGCTGGGACAGACTCCTTTTCCTGATGTGATGGAGCAGGTATTCCATGAAGTGGGTATTG GCAGTGTGCTCTCCCTCCAGAAGTTCTGGCAGCACCGCATCAAGGACTATCACAGTTACATGCTACAGTCCATGACCCACCCCTGCACCA ACCCTCAGCCAACAAGCCGAAGCCCCCCACTATGCTGGACATCCCCTCAGAGCCATGTAGTCTCACCATCCATACGATTCAGTTGATTCA GCACAACCGACGTCTTCGCAACCTTATTGCCACAGCTCAGGCCCAGAATCAGCAGCAGACAGAAGGTGTAAAAACTGAAGAGAGTGAACC TCTTCCCTCGTGCCCTGGGTCACCTCCTCTCCCTGATGACCTCCTGCCTTTAGATTGTAAGAATCCCAATGCACCATTCCAGATCCGGCA >97117_97117_8_USF1-SUPT7L_USF1_chr1_161011907_ENST00000435396_SUPT7L_chr2_27884169_ENST00000405491_length(amino acids)=120AA_BP=14 MAAPHQGLSQLHATVHDPPLHQPSANKPKPPTMLDIPSEPCSLTIHTIQLIQHNRRLRNLIATAQAQNQQQTEGVKTEESEPLPSCPGSP -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for USF1-SUPT7L |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for USF1-SUPT7L |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for USF1-SUPT7L |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |