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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:XDH-RPS27A (FusionGDB2 ID:HG7498TG6233) |
Fusion Gene Summary for XDH-RPS27A |
Fusion gene summary |
Fusion gene information | Fusion gene name: XDH-RPS27A | Fusion gene ID: hg7498tg6233 | Hgene | Tgene | Gene symbol | XDH | RPS27A | Gene ID | 7498 | 6233 |
Gene name | xanthine dehydrogenase | ribosomal protein S27a | |
Synonyms | XAN1|XO|XOR | CEP80|HEL112|S27A|UBA80|UBC|UBCEP1|UBCEP80 | |
Cytomap | ('XDH')('RPS27A') 2p23.1 | 2p16.1 | |
Type of gene | protein-coding | protein-coding | |
Description | xanthine dehydrogenase/oxidasexanthine oxidoreductase | ubiquitin-40S ribosomal protein S27a40S ribosomal protein S27aepididymis luminal protein 112ubiquitin Cubiquitin and ribosomal protein S27aubiquitin carboxyl extension protein 80ubiquitin-CEP80 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000379416, ENST00000491727, | ||
Fusion gene scores | * DoF score | 1 X 1 X 1=1 | 12 X 13 X 6=936 |
# samples | 1 | 17 | |
** MAII score | log2(1/1*10)=3.32192809488736 | log2(17/936*10)=-2.4609737834457 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: XDH [Title/Abstract] AND RPS27A [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | XDH(31562355)-RPS27A(55461967), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | XDH-RPS27A seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. XDH-RPS27A seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. XDH-RPS27A seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. XDH-RPS27A seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | XDH | GO:0001933 | negative regulation of protein phosphorylation | 18386220 |
Hgene | XDH | GO:0001937 | negative regulation of endothelial cell proliferation | 18386220 |
Hgene | XDH | GO:0006919 | activation of cysteine-type endopeptidase activity involved in apoptotic process | 18386220 |
Hgene | XDH | GO:0009115 | xanthine catabolic process | 8670112|17301077 |
Hgene | XDH | GO:0010629 | negative regulation of gene expression | 18386220 |
Hgene | XDH | GO:0045602 | negative regulation of endothelial cell differentiation | 18386220 |
Hgene | XDH | GO:0051898 | negative regulation of protein kinase B signaling | 18386220 |
Hgene | XDH | GO:1900745 | positive regulation of p38MAPK cascade | 18386220 |
Hgene | XDH | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway | 18386220 |
Hgene | XDH | GO:2000379 | positive regulation of reactive oxygen species metabolic process | 18386220 |
Hgene | XDH | GO:2001213 | negative regulation of vasculogenesis | 18386220 |
Fusion gene breakpoints across XDH (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across RPS27A (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BRCA | TCGA-AO-A1KR-01A | XDH | chr2 | 31562355 | - | RPS27A | chr2 | 55461967 | + |
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Fusion Gene ORF analysis for XDH-RPS27A |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000379416 | ENST00000272317 | XDH | chr2 | 31562355 | - | RPS27A | chr2 | 55461967 | + |
In-frame | ENST00000379416 | ENST00000402285 | XDH | chr2 | 31562355 | - | RPS27A | chr2 | 55461967 | + |
In-frame | ENST00000379416 | ENST00000404735 | XDH | chr2 | 31562355 | - | RPS27A | chr2 | 55461967 | + |
intron-3CDS | ENST00000491727 | ENST00000272317 | XDH | chr2 | 31562355 | - | RPS27A | chr2 | 55461967 | + |
intron-3CDS | ENST00000491727 | ENST00000402285 | XDH | chr2 | 31562355 | - | RPS27A | chr2 | 55461967 | + |
intron-3CDS | ENST00000491727 | ENST00000404735 | XDH | chr2 | 31562355 | - | RPS27A | chr2 | 55461967 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000379416 | XDH | chr2 | 31562355 | - | ENST00000402285 | RPS27A | chr2 | 55461967 | + | 4116 | 3823 | 49 | 4104 | 1351 |
ENST00000379416 | XDH | chr2 | 31562355 | - | ENST00000272317 | RPS27A | chr2 | 55461967 | + | 4381 | 3823 | 49 | 4104 | 1351 |
ENST00000379416 | XDH | chr2 | 31562355 | - | ENST00000404735 | RPS27A | chr2 | 55461967 | + | 4283 | 3823 | 49 | 4104 | 1351 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000379416 | ENST00000402285 | XDH | chr2 | 31562355 | - | RPS27A | chr2 | 55461967 | + | 0.001205991 | 0.99879396 |
ENST00000379416 | ENST00000272317 | XDH | chr2 | 31562355 | - | RPS27A | chr2 | 55461967 | + | 0.000855025 | 0.9991449 |
ENST00000379416 | ENST00000404735 | XDH | chr2 | 31562355 | - | RPS27A | chr2 | 55461967 | + | 0.000986536 | 0.9990134 |
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Fusion Genomic Features for XDH-RPS27A |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
XDH | chr2 | 31562354 | - | RPS27A | chr2 | 55461966 | + | 0.000724324 | 0.99927574 |
XDH | chr2 | 31562354 | - | RPS27A | chr2 | 55461966 | + | 0.000724324 | 0.99927574 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for XDH-RPS27A |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr2:31562355/chr2:55461967) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | XDH | chr2:31562355 | chr2:55461967 | ENST00000379416 | - | 34 | 36 | 229_414 | 1258 | 1334.0 | Domain | FAD-binding PCMH-type |
Hgene | XDH | chr2:31562355 | chr2:55461967 | ENST00000379416 | - | 34 | 36 | 4_91 | 1258 | 1334.0 | Domain | 2Fe-2S ferredoxin-type |
Hgene | XDH | chr2:31562355 | chr2:55461967 | ENST00000379416 | - | 34 | 36 | 257_264 | 1258 | 1334.0 | Nucleotide binding | FAD |
Hgene | XDH | chr2:31562355 | chr2:55461967 | ENST00000379416 | - | 34 | 36 | 347_351 | 1258 | 1334.0 | Nucleotide binding | FAD |
Tgene | RPS27A | chr2:31562355 | chr2:55461967 | ENST00000272317 | 3 | 6 | 77_99 | 63 | 157.0 | Compositional bias | Note=Lys-rich (highly basic) | |
Tgene | RPS27A | chr2:31562355 | chr2:55461967 | ENST00000402285 | 3 | 6 | 77_99 | 63 | 157.0 | Compositional bias | Note=Lys-rich (highly basic) | |
Tgene | RPS27A | chr2:31562355 | chr2:55461967 | ENST00000404735 | 2 | 5 | 77_99 | 63 | 157.0 | Compositional bias | Note=Lys-rich (highly basic) | |
Tgene | RPS27A | chr2:31562355 | chr2:55461967 | ENST00000272317 | 3 | 6 | 121_144 | 63 | 157.0 | Zinc finger | Note=C4-type | |
Tgene | RPS27A | chr2:31562355 | chr2:55461967 | ENST00000402285 | 3 | 6 | 121_144 | 63 | 157.0 | Zinc finger | Note=C4-type | |
Tgene | RPS27A | chr2:31562355 | chr2:55461967 | ENST00000404735 | 2 | 5 | 121_144 | 63 | 157.0 | Zinc finger | Note=C4-type |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | RPS27A | chr2:31562355 | chr2:55461967 | ENST00000272317 | 3 | 6 | 1_76 | 63 | 157.0 | Domain | Ubiquitin-like | |
Tgene | RPS27A | chr2:31562355 | chr2:55461967 | ENST00000402285 | 3 | 6 | 1_76 | 63 | 157.0 | Domain | Ubiquitin-like | |
Tgene | RPS27A | chr2:31562355 | chr2:55461967 | ENST00000404735 | 2 | 5 | 1_76 | 63 | 157.0 | Domain | Ubiquitin-like |
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Fusion Gene Sequence for XDH-RPS27A |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>99586_99586_1_XDH-RPS27A_XDH_chr2_31562355_ENST00000379416_RPS27A_chr2_55461967_ENST00000272317_length(transcript)=4381nt_BP=3823nt GTCTCTTAGGAGTGAGGTACCTGGAGTTCGGGGACCCCAACCTGTGACAATGACAGCAGACAAATTGGTTTTCTTTGTGAATGGCAGAAA GGTGGTGGAGAAAAATGCAGATCCAGAGACAACCCTTTTGGCCTACCTGAGAAGAAAGTTGGGGCTGAGTGGAACCAAGCTCGGCTGTGG AGAGGGGGGCTGCGGGGCTTGCACAGTGATGCTCTCCAAGTATGATCGTCTGCAGAACAAGATCGTCCACTTTTCTGCCAATGCCTGCCT GGCCCCCATCTGCTCCTTGCACCATGTTGCAGTGACAACTGTGGAAGGAATAGGAAGCACCAAGACGAGGCTGCATCCTGTGCAGGAGAG AATTGCCAAAAGCCACGGCTCCCAGTGCGGGTTCTGCACCCCTGGCATCGTCATGAGTATGTACACACTGCTCCGGAATCAGCCCGAGCC CACCATGGAGGAGATTGAGAATGCCTTCCAAGGAAATCTGTGCCGCTGCACAGGCTACAGACCCATCCTCCAGGGCTTCCGGACCTTTGC CAGGGATGGTGGATGCTGTGGAGGAGATGGGAATAATCCAAATTGCTGCATGAACCAGAAGAAAGACCACTCAGTCAGCCTCTCGCCATC TTTATTCAAACCAGAGGAGTTCACGCCCCTGGATCCAACCCAGGAGCCCATTTTTCCCCCAGAGTTGCTGAGGCTGAAAGACACTCCTCG GAAGCAGCTGCGATTTGAAGGGGAGCGTGTGACGTGGATACAGGCCTCAACCCTCAAGGAGCTGCTGGACCTCAAGGCTCAGCACCCTGA CGCCAAGCTGGTCGTGGGGAACACGGAGATTGGCATTGAGATGAAGTTCAAGAATATGCTGTTTCCTATGATTGTCTGCCCAGCCTGGAT CCCTGAGCTGAATTCGGTAGAACATGGACCCGACGGTATCTCCTTTGGAGCTGCTTGCCCCCTGAGCATTGTGGAAAAAACCCTGGTGGA TGCTGTTGCTAAGCTTCCTGCCCAAAAGACAGAGGTGTTCAGAGGGGTCCTGGAGCAGCTGCGCTGGTTTGCTGGGAAGCAAGTCAAGTC TGTGGCGTCCGTTGGAGGGAACATCATCACTGCCAGCCCCATCTCCGACCTCAACCCCGTGTTCATGGCCAGTGGGGCCAAGCTGACACT TGTGTCCAGAGGCACCAGGAGAACTGTCCAGATGGACCACACCTTCTTCCCTGGCTACAGAAAGACCCTGCTGAGCCCGGAGGAGATACT GCTCTCCATAGAGATCCCCTACAGCAGGGAGGGGGAGTATTTCTCAGCATTCAAGCAGGCCTCCCGGAGAGAAGATGACATTGCCAAGGT AACCAGTGGCATGAGAGTTTTATTCAAGCCAGGAACCACAGAGGTACAGGAGCTGGCCCTTTGCTATGGTGGAATGGCCAACAGAACCAT CTCAGCCCTCAAGACCACTCAGAGGCAGCTTTCCAAGCTCTGGAAGGAGGAGCTGCTGCAGGACGTGTGTGCAGGACTGGCAGAGGAGCT GCATCTGCCTCCCGATGCCCCTGGTGGCATGGTGGACTTCCGGTGCACCCTCACCCTCAGCTTCTTCTTCAAGTTCTACCTGACAGTCCT TCAGAAGCTGGGCCAAGAGAACCTGGAAGACAAGTGTGGTAAACTGGACCCCACTTTCGCCAGTGCAACTTTACTGTTTCAGAAAGACCC CCCAGCCGATGTCCAGCTCTTCCAAGAGGTGCCCAAGGGTCAGTCTGAGGAGGACATGGTGGGCCGGCCCCTGCCCCACCTGGCAGCGGA CATGCAGGCCTCTGGTGAGGCCGTGTACTGTGACGACATTCCTCGCTACGAGAATGAGCTGTCTCTCCGGCTGGTCACCAGCACCCGGGC CCACGCCAAGATCAAGTCCATAGATACATCAGAAGCTAAGAAGGTTCCAGGGTTTGTTTGTTTCATTTCCGCTGATGATGTTCCTGGGAG TAACATAACTGGAATTTGTAATGATGAGACAGTCTTTGCGAAGGATAAGGTTACTTGTGTTGGGCATATCATTGGTGCTGTGGTTGCTGA CACCCCGGAACACACACAGAGAGCTGCCCAAGGGGTGAAAATCACCTATGAAGAACTACCAGCCATTATCACAATTGAGGATGCTATAAA GAACAACTCCTTTTATGGACCTGAGCTGAAGATCGAGAAAGGGGACCTAAAGAAGGGGTTTTCCGAAGCAGATAATGTTGTGTCAGGGGA GATATACATCGGTGGCCAAGAGCACTTCTACCTGGAGACTCACTGCACCATTGCTGTTCCAAAAGGCGAGGCAGGGGAGATGGAGCTCTT TGTGTCTACACAGAACACCATGAAGACCCAGAGCTTTGTTGCAAAAATGTTGGGGGTTCCAGCAAACCGGATTGTGGTTCGAGTGAAGAG AATGGGAGGAGGCTTTGGAGGCAAGGAGACCCGGAGCACTGTGGTGTCCACGGCAGTGGCCCTGGCTGCATATAAGACCGGCCGCCCTGT GCGATGCATGCTGGACCGTGATGAGGACATGCTGATAACTGGTGGCAGACATCCCTTCCTGGCCAGATACAAGGTTGGCTTCATGAAGAC TGGGACAGTTGTGGCTCTTGAGGTGGACCACTTCAGCAATGTGGGGAACACCCAGGATCTCTCTCAGAGTATTATGGAACGAGCTTTATT CCACATGGACAACTGCTATAAAATCCCCAACATCCGGGGCACTGGGCGGCTGTGCAAAACCAACCTTCCCTCCAACACGGCCTTCCGGGG CTTTGGGGGGCCCCAGGGGATGCTCATTGCCGAGTGCTGGATGAGTGAAGTTGCAGTGACCTGTGGGATGCCTGCAGAGGAGGTGCGGAG AAAAAACCTGTACAAAGAAGGGGACCTGACACACTTCAACCAGAAGCTTGAGGGTTTCACCTTGCCCAGATGCTGGGAAGAATGCCTAGC AAGCTCTCAGTATCATGCTCGGAAGAGTGAGGTTGACAAGTTCAACAAGGAGAATTGTTGGAAAAAGAGAGGATTGTGCATAATTCCCAC CAAGTTTGGAATAAGCTTTACAGTTCCTTTTCTGAATCAGGCAGGAGCCCTACTTCATGTGTACACAGATGGCTCTGTGCTGCTGACCCA CGGGGGGACTGAGATGGGCCAAGGCCTTCATACCAAAATGGTCCAGGTGGCCAGTAGAGCTCTGAAAATCCCCACCTCTAAGATTTATAT CAGCGAGACAAGCACTAACACTGTGCCCAACACCTCTCCCACGGCTGCCTCTGTCAGCGCTGACCTCAATGGACAGGCCGTCTATGCGGC TTGTCAGACCATCTTGAAAAGGCTGGAACCCTACAAGAAGAAGAATCCCAGTGGCTCCTGGGAAGACTGGGTCACAGCTGCCTACATGGA CACAGTGAGCTTGTCTGCCACTGGGTTTTATAGAACACCCAATCTGGGCTACAGCTTTGAGACTAACTCAGGGAACCCCTTCCACTACTT CAGCTATGGGGTGGCTTGCTCTGAAGTAGAAATCGACTGCCTAACAGGAGATCATAAGAACCTCCGCACAGATATTGTCATGGATGTTGG CTCCAGTCTAAACCCTGCCATTGATATTGGACAGGTGGAAGGGGCATTTGTCCAGGGCCTTGGCCTCTTCACCCTAGAGGAGCTACACTA TTCCCCCGAGGGGAGCCTGCACACCCGTGGCCCTAGCACCTACAAGATCCCGGCATTTGGCAGCATCCCCATTGAGTTCAGGGTGTCCCT GCTCCGCGACTGCCCCAACAAGAAGGCCATCTATGCATCGAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGGTGCTAAGAA AAGGAAGAAGAAGTCTTACACCACTCCCAAGAAGAATAAGCACAAGAGAAAGAAGGTTAAGCTGGCTGTCCTGAAATATTATAAGGTGGA TGAGAATGGCAAAATTAGTCGCCTTCGTCGAGAGTGCCCTTCTGATGAATGTGGTGCTGGGGTGTTTATGGCAAGTCACTTTGACAGACA TTATTGTGGCAAATGTTGTCTGACTTACTGTTTCAACAAACCAGAAGACAAGTAACTGTATGAGTTAATAAAAGACATGAACTAACATTT ATTGTTGGGTTTTATTGCAGTAAAAAGAATGGTTTTTAAGCACCAAATTGATGGTCACACCATTTCCTTTTAGTAGTGCTACTGCTATCG CTGTGTGAATGTTGCCTCTGGGGATTATGTGACCCAGTGGTTCTGTATACCTGCCAGGTGCCAACCACTTGTAAAGGTCTTGATATTTTC >99586_99586_1_XDH-RPS27A_XDH_chr2_31562355_ENST00000379416_RPS27A_chr2_55461967_ENST00000272317_length(amino acids)=1351AA_BP=1258 MTADKLVFFVNGRKVVEKNADPETTLLAYLRRKLGLSGTKLGCGEGGCGACTVMLSKYDRLQNKIVHFSANACLAPICSLHHVAVTTVEG IGSTKTRLHPVQERIAKSHGSQCGFCTPGIVMSMYTLLRNQPEPTMEEIENAFQGNLCRCTGYRPILQGFRTFARDGGCCGGDGNNPNCC MNQKKDHSVSLSPSLFKPEEFTPLDPTQEPIFPPELLRLKDTPRKQLRFEGERVTWIQASTLKELLDLKAQHPDAKLVVGNTEIGIEMKF KNMLFPMIVCPAWIPELNSVEHGPDGISFGAACPLSIVEKTLVDAVAKLPAQKTEVFRGVLEQLRWFAGKQVKSVASVGGNIITASPISD LNPVFMASGAKLTLVSRGTRRTVQMDHTFFPGYRKTLLSPEEILLSIEIPYSREGEYFSAFKQASRREDDIAKVTSGMRVLFKPGTTEVQ ELALCYGGMANRTISALKTTQRQLSKLWKEELLQDVCAGLAEELHLPPDAPGGMVDFRCTLTLSFFFKFYLTVLQKLGQENLEDKCGKLD PTFASATLLFQKDPPADVQLFQEVPKGQSEEDMVGRPLPHLAADMQASGEAVYCDDIPRYENELSLRLVTSTRAHAKIKSIDTSEAKKVP GFVCFISADDVPGSNITGICNDETVFAKDKVTCVGHIIGAVVADTPEHTQRAAQGVKITYEELPAIITIEDAIKNNSFYGPELKIEKGDL KKGFSEADNVVSGEIYIGGQEHFYLETHCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKMLGVPANRIVVRVKRMGGGFGGKETRSTVVS TAVALAAYKTGRPVRCMLDRDEDMLITGGRHPFLARYKVGFMKTGTVVALEVDHFSNVGNTQDLSQSIMERALFHMDNCYKIPNIRGTGR LCKTNLPSNTAFRGFGGPQGMLIAECWMSEVAVTCGMPAEEVRRKNLYKEGDLTHFNQKLEGFTLPRCWEECLASSQYHARKSEVDKFNK ENCWKKRGLCIIPTKFGISFTVPFLNQAGALLHVYTDGSVLLTHGGTEMGQGLHTKMVQVASRALKIPTSKIYISETSTNTVPNTSPTAA SVSADLNGQAVYAACQTILKRLEPYKKKNPSGSWEDWVTAAYMDTVSLSATGFYRTPNLGYSFETNSGNPFHYFSYGVACSEVEIDCLTG DHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKKAIYASKES TLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLTYCFNKPED -------------------------------------------------------------- >99586_99586_2_XDH-RPS27A_XDH_chr2_31562355_ENST00000379416_RPS27A_chr2_55461967_ENST00000402285_length(transcript)=4116nt_BP=3823nt GTCTCTTAGGAGTGAGGTACCTGGAGTTCGGGGACCCCAACCTGTGACAATGACAGCAGACAAATTGGTTTTCTTTGTGAATGGCAGAAA GGTGGTGGAGAAAAATGCAGATCCAGAGACAACCCTTTTGGCCTACCTGAGAAGAAAGTTGGGGCTGAGTGGAACCAAGCTCGGCTGTGG AGAGGGGGGCTGCGGGGCTTGCACAGTGATGCTCTCCAAGTATGATCGTCTGCAGAACAAGATCGTCCACTTTTCTGCCAATGCCTGCCT GGCCCCCATCTGCTCCTTGCACCATGTTGCAGTGACAACTGTGGAAGGAATAGGAAGCACCAAGACGAGGCTGCATCCTGTGCAGGAGAG AATTGCCAAAAGCCACGGCTCCCAGTGCGGGTTCTGCACCCCTGGCATCGTCATGAGTATGTACACACTGCTCCGGAATCAGCCCGAGCC CACCATGGAGGAGATTGAGAATGCCTTCCAAGGAAATCTGTGCCGCTGCACAGGCTACAGACCCATCCTCCAGGGCTTCCGGACCTTTGC CAGGGATGGTGGATGCTGTGGAGGAGATGGGAATAATCCAAATTGCTGCATGAACCAGAAGAAAGACCACTCAGTCAGCCTCTCGCCATC TTTATTCAAACCAGAGGAGTTCACGCCCCTGGATCCAACCCAGGAGCCCATTTTTCCCCCAGAGTTGCTGAGGCTGAAAGACACTCCTCG GAAGCAGCTGCGATTTGAAGGGGAGCGTGTGACGTGGATACAGGCCTCAACCCTCAAGGAGCTGCTGGACCTCAAGGCTCAGCACCCTGA CGCCAAGCTGGTCGTGGGGAACACGGAGATTGGCATTGAGATGAAGTTCAAGAATATGCTGTTTCCTATGATTGTCTGCCCAGCCTGGAT CCCTGAGCTGAATTCGGTAGAACATGGACCCGACGGTATCTCCTTTGGAGCTGCTTGCCCCCTGAGCATTGTGGAAAAAACCCTGGTGGA TGCTGTTGCTAAGCTTCCTGCCCAAAAGACAGAGGTGTTCAGAGGGGTCCTGGAGCAGCTGCGCTGGTTTGCTGGGAAGCAAGTCAAGTC TGTGGCGTCCGTTGGAGGGAACATCATCACTGCCAGCCCCATCTCCGACCTCAACCCCGTGTTCATGGCCAGTGGGGCCAAGCTGACACT TGTGTCCAGAGGCACCAGGAGAACTGTCCAGATGGACCACACCTTCTTCCCTGGCTACAGAAAGACCCTGCTGAGCCCGGAGGAGATACT GCTCTCCATAGAGATCCCCTACAGCAGGGAGGGGGAGTATTTCTCAGCATTCAAGCAGGCCTCCCGGAGAGAAGATGACATTGCCAAGGT AACCAGTGGCATGAGAGTTTTATTCAAGCCAGGAACCACAGAGGTACAGGAGCTGGCCCTTTGCTATGGTGGAATGGCCAACAGAACCAT CTCAGCCCTCAAGACCACTCAGAGGCAGCTTTCCAAGCTCTGGAAGGAGGAGCTGCTGCAGGACGTGTGTGCAGGACTGGCAGAGGAGCT GCATCTGCCTCCCGATGCCCCTGGTGGCATGGTGGACTTCCGGTGCACCCTCACCCTCAGCTTCTTCTTCAAGTTCTACCTGACAGTCCT TCAGAAGCTGGGCCAAGAGAACCTGGAAGACAAGTGTGGTAAACTGGACCCCACTTTCGCCAGTGCAACTTTACTGTTTCAGAAAGACCC CCCAGCCGATGTCCAGCTCTTCCAAGAGGTGCCCAAGGGTCAGTCTGAGGAGGACATGGTGGGCCGGCCCCTGCCCCACCTGGCAGCGGA CATGCAGGCCTCTGGTGAGGCCGTGTACTGTGACGACATTCCTCGCTACGAGAATGAGCTGTCTCTCCGGCTGGTCACCAGCACCCGGGC CCACGCCAAGATCAAGTCCATAGATACATCAGAAGCTAAGAAGGTTCCAGGGTTTGTTTGTTTCATTTCCGCTGATGATGTTCCTGGGAG TAACATAACTGGAATTTGTAATGATGAGACAGTCTTTGCGAAGGATAAGGTTACTTGTGTTGGGCATATCATTGGTGCTGTGGTTGCTGA CACCCCGGAACACACACAGAGAGCTGCCCAAGGGGTGAAAATCACCTATGAAGAACTACCAGCCATTATCACAATTGAGGATGCTATAAA GAACAACTCCTTTTATGGACCTGAGCTGAAGATCGAGAAAGGGGACCTAAAGAAGGGGTTTTCCGAAGCAGATAATGTTGTGTCAGGGGA GATATACATCGGTGGCCAAGAGCACTTCTACCTGGAGACTCACTGCACCATTGCTGTTCCAAAAGGCGAGGCAGGGGAGATGGAGCTCTT TGTGTCTACACAGAACACCATGAAGACCCAGAGCTTTGTTGCAAAAATGTTGGGGGTTCCAGCAAACCGGATTGTGGTTCGAGTGAAGAG AATGGGAGGAGGCTTTGGAGGCAAGGAGACCCGGAGCACTGTGGTGTCCACGGCAGTGGCCCTGGCTGCATATAAGACCGGCCGCCCTGT GCGATGCATGCTGGACCGTGATGAGGACATGCTGATAACTGGTGGCAGACATCCCTTCCTGGCCAGATACAAGGTTGGCTTCATGAAGAC TGGGACAGTTGTGGCTCTTGAGGTGGACCACTTCAGCAATGTGGGGAACACCCAGGATCTCTCTCAGAGTATTATGGAACGAGCTTTATT CCACATGGACAACTGCTATAAAATCCCCAACATCCGGGGCACTGGGCGGCTGTGCAAAACCAACCTTCCCTCCAACACGGCCTTCCGGGG CTTTGGGGGGCCCCAGGGGATGCTCATTGCCGAGTGCTGGATGAGTGAAGTTGCAGTGACCTGTGGGATGCCTGCAGAGGAGGTGCGGAG AAAAAACCTGTACAAAGAAGGGGACCTGACACACTTCAACCAGAAGCTTGAGGGTTTCACCTTGCCCAGATGCTGGGAAGAATGCCTAGC AAGCTCTCAGTATCATGCTCGGAAGAGTGAGGTTGACAAGTTCAACAAGGAGAATTGTTGGAAAAAGAGAGGATTGTGCATAATTCCCAC CAAGTTTGGAATAAGCTTTACAGTTCCTTTTCTGAATCAGGCAGGAGCCCTACTTCATGTGTACACAGATGGCTCTGTGCTGCTGACCCA CGGGGGGACTGAGATGGGCCAAGGCCTTCATACCAAAATGGTCCAGGTGGCCAGTAGAGCTCTGAAAATCCCCACCTCTAAGATTTATAT CAGCGAGACAAGCACTAACACTGTGCCCAACACCTCTCCCACGGCTGCCTCTGTCAGCGCTGACCTCAATGGACAGGCCGTCTATGCGGC TTGTCAGACCATCTTGAAAAGGCTGGAACCCTACAAGAAGAAGAATCCCAGTGGCTCCTGGGAAGACTGGGTCACAGCTGCCTACATGGA CACAGTGAGCTTGTCTGCCACTGGGTTTTATAGAACACCCAATCTGGGCTACAGCTTTGAGACTAACTCAGGGAACCCCTTCCACTACTT CAGCTATGGGGTGGCTTGCTCTGAAGTAGAAATCGACTGCCTAACAGGAGATCATAAGAACCTCCGCACAGATATTGTCATGGATGTTGG CTCCAGTCTAAACCCTGCCATTGATATTGGACAGGTGGAAGGGGCATTTGTCCAGGGCCTTGGCCTCTTCACCCTAGAGGAGCTACACTA TTCCCCCGAGGGGAGCCTGCACACCCGTGGCCCTAGCACCTACAAGATCCCGGCATTTGGCAGCATCCCCATTGAGTTCAGGGTGTCCCT GCTCCGCGACTGCCCCAACAAGAAGGCCATCTATGCATCGAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGGTGCTAAGAA AAGGAAGAAGAAGTCTTACACCACTCCCAAGAAGAATAAGCACAAGAGAAAGAAGGTTAAGCTGGCTGTCCTGAAATATTATAAGGTGGA TGAGAATGGCAAAATTAGTCGCCTTCGTCGAGAGTGCCCTTCTGATGAATGTGGTGCTGGGGTGTTTATGGCAAGTCACTTTGACAGACA >99586_99586_2_XDH-RPS27A_XDH_chr2_31562355_ENST00000379416_RPS27A_chr2_55461967_ENST00000402285_length(amino acids)=1351AA_BP=1258 MTADKLVFFVNGRKVVEKNADPETTLLAYLRRKLGLSGTKLGCGEGGCGACTVMLSKYDRLQNKIVHFSANACLAPICSLHHVAVTTVEG IGSTKTRLHPVQERIAKSHGSQCGFCTPGIVMSMYTLLRNQPEPTMEEIENAFQGNLCRCTGYRPILQGFRTFARDGGCCGGDGNNPNCC MNQKKDHSVSLSPSLFKPEEFTPLDPTQEPIFPPELLRLKDTPRKQLRFEGERVTWIQASTLKELLDLKAQHPDAKLVVGNTEIGIEMKF KNMLFPMIVCPAWIPELNSVEHGPDGISFGAACPLSIVEKTLVDAVAKLPAQKTEVFRGVLEQLRWFAGKQVKSVASVGGNIITASPISD LNPVFMASGAKLTLVSRGTRRTVQMDHTFFPGYRKTLLSPEEILLSIEIPYSREGEYFSAFKQASRREDDIAKVTSGMRVLFKPGTTEVQ ELALCYGGMANRTISALKTTQRQLSKLWKEELLQDVCAGLAEELHLPPDAPGGMVDFRCTLTLSFFFKFYLTVLQKLGQENLEDKCGKLD PTFASATLLFQKDPPADVQLFQEVPKGQSEEDMVGRPLPHLAADMQASGEAVYCDDIPRYENELSLRLVTSTRAHAKIKSIDTSEAKKVP GFVCFISADDVPGSNITGICNDETVFAKDKVTCVGHIIGAVVADTPEHTQRAAQGVKITYEELPAIITIEDAIKNNSFYGPELKIEKGDL KKGFSEADNVVSGEIYIGGQEHFYLETHCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKMLGVPANRIVVRVKRMGGGFGGKETRSTVVS TAVALAAYKTGRPVRCMLDRDEDMLITGGRHPFLARYKVGFMKTGTVVALEVDHFSNVGNTQDLSQSIMERALFHMDNCYKIPNIRGTGR LCKTNLPSNTAFRGFGGPQGMLIAECWMSEVAVTCGMPAEEVRRKNLYKEGDLTHFNQKLEGFTLPRCWEECLASSQYHARKSEVDKFNK ENCWKKRGLCIIPTKFGISFTVPFLNQAGALLHVYTDGSVLLTHGGTEMGQGLHTKMVQVASRALKIPTSKIYISETSTNTVPNTSPTAA SVSADLNGQAVYAACQTILKRLEPYKKKNPSGSWEDWVTAAYMDTVSLSATGFYRTPNLGYSFETNSGNPFHYFSYGVACSEVEIDCLTG DHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKKAIYASKES TLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLTYCFNKPED -------------------------------------------------------------- >99586_99586_3_XDH-RPS27A_XDH_chr2_31562355_ENST00000379416_RPS27A_chr2_55461967_ENST00000404735_length(transcript)=4283nt_BP=3823nt GTCTCTTAGGAGTGAGGTACCTGGAGTTCGGGGACCCCAACCTGTGACAATGACAGCAGACAAATTGGTTTTCTTTGTGAATGGCAGAAA GGTGGTGGAGAAAAATGCAGATCCAGAGACAACCCTTTTGGCCTACCTGAGAAGAAAGTTGGGGCTGAGTGGAACCAAGCTCGGCTGTGG AGAGGGGGGCTGCGGGGCTTGCACAGTGATGCTCTCCAAGTATGATCGTCTGCAGAACAAGATCGTCCACTTTTCTGCCAATGCCTGCCT GGCCCCCATCTGCTCCTTGCACCATGTTGCAGTGACAACTGTGGAAGGAATAGGAAGCACCAAGACGAGGCTGCATCCTGTGCAGGAGAG AATTGCCAAAAGCCACGGCTCCCAGTGCGGGTTCTGCACCCCTGGCATCGTCATGAGTATGTACACACTGCTCCGGAATCAGCCCGAGCC CACCATGGAGGAGATTGAGAATGCCTTCCAAGGAAATCTGTGCCGCTGCACAGGCTACAGACCCATCCTCCAGGGCTTCCGGACCTTTGC CAGGGATGGTGGATGCTGTGGAGGAGATGGGAATAATCCAAATTGCTGCATGAACCAGAAGAAAGACCACTCAGTCAGCCTCTCGCCATC TTTATTCAAACCAGAGGAGTTCACGCCCCTGGATCCAACCCAGGAGCCCATTTTTCCCCCAGAGTTGCTGAGGCTGAAAGACACTCCTCG GAAGCAGCTGCGATTTGAAGGGGAGCGTGTGACGTGGATACAGGCCTCAACCCTCAAGGAGCTGCTGGACCTCAAGGCTCAGCACCCTGA CGCCAAGCTGGTCGTGGGGAACACGGAGATTGGCATTGAGATGAAGTTCAAGAATATGCTGTTTCCTATGATTGTCTGCCCAGCCTGGAT CCCTGAGCTGAATTCGGTAGAACATGGACCCGACGGTATCTCCTTTGGAGCTGCTTGCCCCCTGAGCATTGTGGAAAAAACCCTGGTGGA TGCTGTTGCTAAGCTTCCTGCCCAAAAGACAGAGGTGTTCAGAGGGGTCCTGGAGCAGCTGCGCTGGTTTGCTGGGAAGCAAGTCAAGTC TGTGGCGTCCGTTGGAGGGAACATCATCACTGCCAGCCCCATCTCCGACCTCAACCCCGTGTTCATGGCCAGTGGGGCCAAGCTGACACT TGTGTCCAGAGGCACCAGGAGAACTGTCCAGATGGACCACACCTTCTTCCCTGGCTACAGAAAGACCCTGCTGAGCCCGGAGGAGATACT GCTCTCCATAGAGATCCCCTACAGCAGGGAGGGGGAGTATTTCTCAGCATTCAAGCAGGCCTCCCGGAGAGAAGATGACATTGCCAAGGT AACCAGTGGCATGAGAGTTTTATTCAAGCCAGGAACCACAGAGGTACAGGAGCTGGCCCTTTGCTATGGTGGAATGGCCAACAGAACCAT CTCAGCCCTCAAGACCACTCAGAGGCAGCTTTCCAAGCTCTGGAAGGAGGAGCTGCTGCAGGACGTGTGTGCAGGACTGGCAGAGGAGCT GCATCTGCCTCCCGATGCCCCTGGTGGCATGGTGGACTTCCGGTGCACCCTCACCCTCAGCTTCTTCTTCAAGTTCTACCTGACAGTCCT TCAGAAGCTGGGCCAAGAGAACCTGGAAGACAAGTGTGGTAAACTGGACCCCACTTTCGCCAGTGCAACTTTACTGTTTCAGAAAGACCC CCCAGCCGATGTCCAGCTCTTCCAAGAGGTGCCCAAGGGTCAGTCTGAGGAGGACATGGTGGGCCGGCCCCTGCCCCACCTGGCAGCGGA CATGCAGGCCTCTGGTGAGGCCGTGTACTGTGACGACATTCCTCGCTACGAGAATGAGCTGTCTCTCCGGCTGGTCACCAGCACCCGGGC CCACGCCAAGATCAAGTCCATAGATACATCAGAAGCTAAGAAGGTTCCAGGGTTTGTTTGTTTCATTTCCGCTGATGATGTTCCTGGGAG TAACATAACTGGAATTTGTAATGATGAGACAGTCTTTGCGAAGGATAAGGTTACTTGTGTTGGGCATATCATTGGTGCTGTGGTTGCTGA CACCCCGGAACACACACAGAGAGCTGCCCAAGGGGTGAAAATCACCTATGAAGAACTACCAGCCATTATCACAATTGAGGATGCTATAAA GAACAACTCCTTTTATGGACCTGAGCTGAAGATCGAGAAAGGGGACCTAAAGAAGGGGTTTTCCGAAGCAGATAATGTTGTGTCAGGGGA GATATACATCGGTGGCCAAGAGCACTTCTACCTGGAGACTCACTGCACCATTGCTGTTCCAAAAGGCGAGGCAGGGGAGATGGAGCTCTT TGTGTCTACACAGAACACCATGAAGACCCAGAGCTTTGTTGCAAAAATGTTGGGGGTTCCAGCAAACCGGATTGTGGTTCGAGTGAAGAG AATGGGAGGAGGCTTTGGAGGCAAGGAGACCCGGAGCACTGTGGTGTCCACGGCAGTGGCCCTGGCTGCATATAAGACCGGCCGCCCTGT GCGATGCATGCTGGACCGTGATGAGGACATGCTGATAACTGGTGGCAGACATCCCTTCCTGGCCAGATACAAGGTTGGCTTCATGAAGAC TGGGACAGTTGTGGCTCTTGAGGTGGACCACTTCAGCAATGTGGGGAACACCCAGGATCTCTCTCAGAGTATTATGGAACGAGCTTTATT CCACATGGACAACTGCTATAAAATCCCCAACATCCGGGGCACTGGGCGGCTGTGCAAAACCAACCTTCCCTCCAACACGGCCTTCCGGGG CTTTGGGGGGCCCCAGGGGATGCTCATTGCCGAGTGCTGGATGAGTGAAGTTGCAGTGACCTGTGGGATGCCTGCAGAGGAGGTGCGGAG AAAAAACCTGTACAAAGAAGGGGACCTGACACACTTCAACCAGAAGCTTGAGGGTTTCACCTTGCCCAGATGCTGGGAAGAATGCCTAGC AAGCTCTCAGTATCATGCTCGGAAGAGTGAGGTTGACAAGTTCAACAAGGAGAATTGTTGGAAAAAGAGAGGATTGTGCATAATTCCCAC CAAGTTTGGAATAAGCTTTACAGTTCCTTTTCTGAATCAGGCAGGAGCCCTACTTCATGTGTACACAGATGGCTCTGTGCTGCTGACCCA CGGGGGGACTGAGATGGGCCAAGGCCTTCATACCAAAATGGTCCAGGTGGCCAGTAGAGCTCTGAAAATCCCCACCTCTAAGATTTATAT CAGCGAGACAAGCACTAACACTGTGCCCAACACCTCTCCCACGGCTGCCTCTGTCAGCGCTGACCTCAATGGACAGGCCGTCTATGCGGC TTGTCAGACCATCTTGAAAAGGCTGGAACCCTACAAGAAGAAGAATCCCAGTGGCTCCTGGGAAGACTGGGTCACAGCTGCCTACATGGA CACAGTGAGCTTGTCTGCCACTGGGTTTTATAGAACACCCAATCTGGGCTACAGCTTTGAGACTAACTCAGGGAACCCCTTCCACTACTT CAGCTATGGGGTGGCTTGCTCTGAAGTAGAAATCGACTGCCTAACAGGAGATCATAAGAACCTCCGCACAGATATTGTCATGGATGTTGG CTCCAGTCTAAACCCTGCCATTGATATTGGACAGGTGGAAGGGGCATTTGTCCAGGGCCTTGGCCTCTTCACCCTAGAGGAGCTACACTA TTCCCCCGAGGGGAGCCTGCACACCCGTGGCCCTAGCACCTACAAGATCCCGGCATTTGGCAGCATCCCCATTGAGTTCAGGGTGTCCCT GCTCCGCGACTGCCCCAACAAGAAGGCCATCTATGCATCGAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGGTGCTAAGAA AAGGAAGAAGAAGTCTTACACCACTCCCAAGAAGAATAAGCACAAGAGAAAGAAGGTTAAGCTGGCTGTCCTGAAATATTATAAGGTGGA TGAGAATGGCAAAATTAGTCGCCTTCGTCGAGAGTGCCCTTCTGATGAATGTGGTGCTGGGGTGTTTATGGCAAGTCACTTTGACAGACA TTATTGTGGCAAATGTTGTCTGACTTACTGTTTCAACAAACCAGAAGACAAGTAACTGTATGAGTTAATAAAAGACATGAACTAACATTT ATTGTTGGGTTTTATTGCAGTAAAAAGAATGGTTTTTAAGCACCAAATTGATGGTCACACCATTTCCTTTTAGTAGTGCTACTGCTATCG >99586_99586_3_XDH-RPS27A_XDH_chr2_31562355_ENST00000379416_RPS27A_chr2_55461967_ENST00000404735_length(amino acids)=1351AA_BP=1258 MTADKLVFFVNGRKVVEKNADPETTLLAYLRRKLGLSGTKLGCGEGGCGACTVMLSKYDRLQNKIVHFSANACLAPICSLHHVAVTTVEG IGSTKTRLHPVQERIAKSHGSQCGFCTPGIVMSMYTLLRNQPEPTMEEIENAFQGNLCRCTGYRPILQGFRTFARDGGCCGGDGNNPNCC MNQKKDHSVSLSPSLFKPEEFTPLDPTQEPIFPPELLRLKDTPRKQLRFEGERVTWIQASTLKELLDLKAQHPDAKLVVGNTEIGIEMKF KNMLFPMIVCPAWIPELNSVEHGPDGISFGAACPLSIVEKTLVDAVAKLPAQKTEVFRGVLEQLRWFAGKQVKSVASVGGNIITASPISD LNPVFMASGAKLTLVSRGTRRTVQMDHTFFPGYRKTLLSPEEILLSIEIPYSREGEYFSAFKQASRREDDIAKVTSGMRVLFKPGTTEVQ ELALCYGGMANRTISALKTTQRQLSKLWKEELLQDVCAGLAEELHLPPDAPGGMVDFRCTLTLSFFFKFYLTVLQKLGQENLEDKCGKLD PTFASATLLFQKDPPADVQLFQEVPKGQSEEDMVGRPLPHLAADMQASGEAVYCDDIPRYENELSLRLVTSTRAHAKIKSIDTSEAKKVP GFVCFISADDVPGSNITGICNDETVFAKDKVTCVGHIIGAVVADTPEHTQRAAQGVKITYEELPAIITIEDAIKNNSFYGPELKIEKGDL KKGFSEADNVVSGEIYIGGQEHFYLETHCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKMLGVPANRIVVRVKRMGGGFGGKETRSTVVS TAVALAAYKTGRPVRCMLDRDEDMLITGGRHPFLARYKVGFMKTGTVVALEVDHFSNVGNTQDLSQSIMERALFHMDNCYKIPNIRGTGR LCKTNLPSNTAFRGFGGPQGMLIAECWMSEVAVTCGMPAEEVRRKNLYKEGDLTHFNQKLEGFTLPRCWEECLASSQYHARKSEVDKFNK ENCWKKRGLCIIPTKFGISFTVPFLNQAGALLHVYTDGSVLLTHGGTEMGQGLHTKMVQVASRALKIPTSKIYISETSTNTVPNTSPTAA SVSADLNGQAVYAACQTILKRLEPYKKKNPSGSWEDWVTAAYMDTVSLSATGFYRTPNLGYSFETNSGNPFHYFSYGVACSEVEIDCLTG DHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKKAIYASKES TLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLTYCFNKPED -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for XDH-RPS27A |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for XDH-RPS27A |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for XDH-RPS27A |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | XDH | C0268118 | Xanthinuria, Type I | 4 | CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT |
Hgene | XDH | C0004352 | Autistic Disorder | 1 | CTD_human |
Hgene | XDH | C0007097 | Carcinoma | 1 | CTD_human |
Hgene | XDH | C0011574 | Involutional Depression | 1 | CTD_human |
Hgene | XDH | C0018099 | Gout | 1 | CTD_human |
Hgene | XDH | C0018799 | Heart Diseases | 1 | CTD_human |
Hgene | XDH | C0018801 | Heart failure | 1 | CTD_human |
Hgene | XDH | C0018802 | Congestive heart failure | 1 | CTD_human |
Hgene | XDH | C0022116 | Ischemia | 1 | CTD_human |
Hgene | XDH | C0023212 | Left-Sided Heart Failure | 1 | CTD_human |
Hgene | XDH | C0024667 | Animal Mammary Neoplasms | 1 | CTD_human |
Hgene | XDH | C0024668 | Mammary Neoplasms, Experimental | 1 | CTD_human |
Hgene | XDH | C0026766 | Multiple Organ Failure | 1 | CTD_human |
Hgene | XDH | C0027746 | Nerve Degeneration | 1 | CTD_human |
Hgene | XDH | C0034065 | Pulmonary Embolism | 1 | CTD_human |
Hgene | XDH | C0035126 | Reperfusion Injury | 1 | CTD_human |
Hgene | XDH | C0040034 | Thrombocytopenia | 1 | CTD_human |
Hgene | XDH | C0205696 | Anaplastic carcinoma | 1 | CTD_human |
Hgene | XDH | C0205697 | Carcinoma, Spindle-Cell | 1 | CTD_human |
Hgene | XDH | C0205698 | Undifferentiated carcinoma | 1 | CTD_human |
Hgene | XDH | C0205699 | Carcinomatosis | 1 | CTD_human |
Hgene | XDH | C0235527 | Heart Failure, Right-Sided | 1 | CTD_human |
Hgene | XDH | C0238281 | Middle Cerebral Artery Syndrome | 1 | CTD_human |
Hgene | XDH | C0524702 | Pulmonary Thromboembolisms | 1 | CTD_human |
Hgene | XDH | C0740376 | Middle Cerebral Artery Thrombosis | 1 | CTD_human |
Hgene | XDH | C0740391 | Middle Cerebral Artery Occlusion | 1 | CTD_human |
Hgene | XDH | C0740392 | Infarction, Middle Cerebral Artery | 1 | CTD_human |
Hgene | XDH | C0740394 | Hyperuricemia | 1 | CTD_human |
Hgene | XDH | C0751845 | Middle Cerebral Artery Embolus | 1 | CTD_human |
Hgene | XDH | C0751846 | Left Middle Cerebral Artery Infarction | 1 | CTD_human |
Hgene | XDH | C0751847 | Embolic Infarction, Middle Cerebral Artery | 1 | CTD_human |
Hgene | XDH | C0751848 | Thrombotic Infarction, Middle Cerebral Artery | 1 | CTD_human |
Hgene | XDH | C0751849 | Right Middle Cerebral Artery Infarction | 1 | CTD_human |
Hgene | XDH | C1257925 | Mammary Carcinoma, Animal | 1 | CTD_human |
Hgene | XDH | C1269683 | Major Depressive Disorder | 1 | CTD_human |
Hgene | XDH | C1571983 | Involutional paraphrenia | 1 | CTD_human |
Hgene | XDH | C1571984 | Psychosis, Involutional | 1 | CTD_human |
Hgene | XDH | C1959583 | Myocardial Failure | 1 | CTD_human |
Hgene | XDH | C1961112 | Heart Decompensation | 1 | CTD_human |
Tgene | C1260899 | Anemia, Diamond-Blackfan | 1 | GENOMICS_ENGLAND |