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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:RBM10-ZNF148 (FusionGDB2 ID:HG8241TG7707) |
Fusion Gene Summary for RBM10-ZNF148 |
Fusion gene summary |
Fusion gene information | Fusion gene name: RBM10-ZNF148 | Fusion gene ID: hg8241tg7707 | Hgene | Tgene | Gene symbol | RBM10 | ZNF148 | Gene ID | 8241 | 7707 |
Gene name | RNA binding motif protein 10 | zinc finger protein 148 | |
Synonyms | DXS8237E|GPATC9|GPATCH9|S1-1|TARPS|ZRANB5 | BERF-1|BFCOL1|GDACCF|HT-BETA|ZBP-89|ZFP148|pHZ-52 | |
Cytomap | ('RBM10')('ZNF148') Xp11.3 | 3q21.2 | |
Type of gene | protein-coding | protein-coding | |
Description | RNA-binding protein 10RNA-binding protein S1-1epididymis secretory sperm binding proteing patch domain-containing protein 9 | zinc finger protein 148CACCC box-binding proteinCLL-associated antigen KW-10transcription factor ZBP-89zinc finger DNA-binding protein 89 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000329236, ENST00000345781, ENST00000377604, ENST00000478410, | ||
Fusion gene scores | * DoF score | 17 X 8 X 9=1224 | 10 X 9 X 5=450 |
# samples | 18 | 13 | |
** MAII score | log2(18/1224*10)=-2.76553474636298 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(13/450*10)=-1.79141337818858 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: RBM10 [Title/Abstract] AND ZNF148 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | RBM10(47006897)-ZNF148(124951498), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | RBM10-ZNF148 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. RBM10-ZNF148 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. RBM10-ZNF148 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. RBM10-ZNF148 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. RBM10-ZNF148 seems lost the major protein functional domain in Hgene partner, which is a CGC due to the frame-shifted ORF. RBM10-ZNF148 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. RBM10-ZNF148 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. RBM10-ZNF148 seems lost the major protein functional domain in Tgene partner, which is a transcription factor due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | ZNF148 | GO:0000122 | negative regulation of transcription by RNA polymerase II | 12771217 |
Tgene | ZNF148 | GO:0010629 | negative regulation of gene expression | 12771217 |
Tgene | ZNF148 | GO:0045892 | negative regulation of transcription, DNA-templated | 12771217 |
Fusion gene breakpoints across RBM10 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across ZNF148 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | STAD | TCGA-BR-8077-01A | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
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Fusion Gene ORF analysis for RBM10-ZNF148 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-5UTR | ENST00000329236 | ENST00000497929 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
5CDS-5UTR | ENST00000345781 | ENST00000497929 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
5CDS-5UTR | ENST00000377604 | ENST00000497929 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
Frame-shift | ENST00000329236 | ENST00000468369 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
Frame-shift | ENST00000329236 | ENST00000485866 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
Frame-shift | ENST00000329236 | ENST00000492394 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
Frame-shift | ENST00000329236 | ENST00000544464 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
Frame-shift | ENST00000345781 | ENST00000468369 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
Frame-shift | ENST00000345781 | ENST00000485866 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
Frame-shift | ENST00000345781 | ENST00000492394 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
Frame-shift | ENST00000345781 | ENST00000544464 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
Frame-shift | ENST00000377604 | ENST00000468369 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
Frame-shift | ENST00000377604 | ENST00000485866 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
Frame-shift | ENST00000377604 | ENST00000492394 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
Frame-shift | ENST00000377604 | ENST00000544464 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
In-frame | ENST00000329236 | ENST00000360647 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
In-frame | ENST00000329236 | ENST00000484491 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
In-frame | ENST00000345781 | ENST00000360647 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
In-frame | ENST00000345781 | ENST00000484491 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
In-frame | ENST00000377604 | ENST00000360647 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
In-frame | ENST00000377604 | ENST00000484491 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
intron-3CDS | ENST00000478410 | ENST00000360647 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
intron-3CDS | ENST00000478410 | ENST00000468369 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
intron-3CDS | ENST00000478410 | ENST00000484491 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
intron-3CDS | ENST00000478410 | ENST00000485866 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
intron-3CDS | ENST00000478410 | ENST00000492394 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
intron-3CDS | ENST00000478410 | ENST00000544464 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
intron-5UTR | ENST00000478410 | ENST00000497929 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000377604 | RBM10 | chrX | 47006897 | + | ENST00000360647 | ZNF148 | chr3 | 124951498 | - | 7853 | 759 | 775 | 350 | 141 |
ENST00000377604 | RBM10 | chrX | 47006897 | + | ENST00000484491 | ZNF148 | chr3 | 124951498 | - | 1338 | 759 | 641 | 216 | 141 |
ENST00000329236 | RBM10 | chrX | 47006897 | + | ENST00000360647 | ZNF148 | chr3 | 124951498 | - | 7490 | 396 | 412 | 2 | 137 |
ENST00000329236 | RBM10 | chrX | 47006897 | + | ENST00000484491 | ZNF148 | chr3 | 124951498 | - | 975 | 396 | 412 | 2 | 137 |
ENST00000345781 | RBM10 | chrX | 47006897 | + | ENST00000360647 | ZNF148 | chr3 | 124951498 | - | 7443 | 349 | 365 | 0 | 122 |
ENST00000345781 | RBM10 | chrX | 47006897 | + | ENST00000484491 | ZNF148 | chr3 | 124951498 | - | 928 | 349 | 365 | 0 | 122 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000377604 | ENST00000360647 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - | 0.12537321 | 0.87462676 |
ENST00000377604 | ENST00000484491 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - | 0.10029971 | 0.89970034 |
ENST00000329236 | ENST00000360647 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - | 0.1228964 | 0.87710357 |
ENST00000329236 | ENST00000484491 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - | 0.07377836 | 0.92622167 |
ENST00000345781 | ENST00000360647 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - | 0.12362426 | 0.87637573 |
ENST00000345781 | ENST00000484491 | RBM10 | chrX | 47006897 | + | ZNF148 | chr3 | 124951498 | - | 0.064302176 | 0.93569785 |
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Fusion Genomic Features for RBM10-ZNF148 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
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Fusion Protein Features for RBM10-ZNF148 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chrX:47006897/chr3:124951498) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | ZNF148 | chrX:47006897 | chr3:124951498 | ENST00000360647 | 0 | 9 | 171_193 | 0 | 795.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZNF148 | chrX:47006897 | chr3:124951498 | ENST00000360647 | 0 | 9 | 199_221 | 0 | 795.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZNF148 | chrX:47006897 | chr3:124951498 | ENST00000360647 | 0 | 9 | 227_249 | 0 | 795.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZNF148 | chrX:47006897 | chr3:124951498 | ENST00000360647 | 0 | 9 | 255_278 | 0 | 795.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZNF148 | chrX:47006897 | chr3:124951498 | ENST00000484491 | 0 | 9 | 171_193 | 0 | 795.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZNF148 | chrX:47006897 | chr3:124951498 | ENST00000484491 | 0 | 9 | 199_221 | 0 | 795.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZNF148 | chrX:47006897 | chr3:124951498 | ENST00000484491 | 0 | 9 | 227_249 | 0 | 795.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZNF148 | chrX:47006897 | chr3:124951498 | ENST00000484491 | 0 | 9 | 255_278 | 0 | 795.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZNF148 | chrX:47006897 | chr3:124951498 | ENST00000485866 | 0 | 10 | 171_193 | 0 | 795.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZNF148 | chrX:47006897 | chr3:124951498 | ENST00000485866 | 0 | 10 | 199_221 | 0 | 795.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZNF148 | chrX:47006897 | chr3:124951498 | ENST00000485866 | 0 | 10 | 227_249 | 0 | 795.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZNF148 | chrX:47006897 | chr3:124951498 | ENST00000485866 | 0 | 10 | 255_278 | 0 | 795.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZNF148 | chrX:47006897 | chr3:124951498 | ENST00000492394 | 0 | 8 | 171_193 | 0 | 795.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZNF148 | chrX:47006897 | chr3:124951498 | ENST00000492394 | 0 | 8 | 199_221 | 0 | 795.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZNF148 | chrX:47006897 | chr3:124951498 | ENST00000492394 | 0 | 8 | 227_249 | 0 | 795.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZNF148 | chrX:47006897 | chr3:124951498 | ENST00000492394 | 0 | 8 | 255_278 | 0 | 795.0 | Zinc finger | C2H2-type 4 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000329236 | + | 2 | 23 | 113_125 | 5 | 853.0 | Compositional bias | Note=Poly-Glu |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000329236 | + | 2 | 23 | 561_607 | 5 | 853.0 | Compositional bias | Note=Tyr-rich |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000329236 | + | 2 | 23 | 80_87 | 5 | 853.0 | Compositional bias | Note=Poly-Arg |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000345781 | + | 2 | 23 | 113_125 | 5 | 854.0 | Compositional bias | Note=Poly-Glu |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000345781 | + | 2 | 23 | 561_607 | 5 | 854.0 | Compositional bias | Note=Tyr-rich |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000345781 | + | 2 | 23 | 80_87 | 5 | 854.0 | Compositional bias | Note=Poly-Arg |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000377604 | + | 2 | 24 | 113_125 | 5 | 931.0 | Compositional bias | Note=Poly-Glu |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000377604 | + | 2 | 24 | 561_607 | 5 | 931.0 | Compositional bias | Note=Tyr-rich |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000377604 | + | 2 | 24 | 80_87 | 5 | 931.0 | Compositional bias | Note=Poly-Arg |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000329236 | + | 2 | 23 | 129_209 | 5 | 853.0 | Domain | RRM 1 |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000329236 | + | 2 | 23 | 300_384 | 5 | 853.0 | Domain | RRM 2 |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000329236 | + | 2 | 23 | 858_904 | 5 | 853.0 | Domain | G-patch |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000345781 | + | 2 | 23 | 129_209 | 5 | 854.0 | Domain | RRM 1 |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000345781 | + | 2 | 23 | 300_384 | 5 | 854.0 | Domain | RRM 2 |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000345781 | + | 2 | 23 | 858_904 | 5 | 854.0 | Domain | G-patch |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000377604 | + | 2 | 24 | 129_209 | 5 | 931.0 | Domain | RRM 1 |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000377604 | + | 2 | 24 | 300_384 | 5 | 931.0 | Domain | RRM 2 |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000377604 | + | 2 | 24 | 858_904 | 5 | 931.0 | Domain | G-patch |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000329236 | + | 2 | 23 | 212_242 | 5 | 853.0 | Zinc finger | RanBP2-type |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000329236 | + | 2 | 23 | 759_784 | 5 | 853.0 | Zinc finger | C2H2-type%3B atypical |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000345781 | + | 2 | 23 | 212_242 | 5 | 854.0 | Zinc finger | RanBP2-type |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000345781 | + | 2 | 23 | 759_784 | 5 | 854.0 | Zinc finger | C2H2-type%3B atypical |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000377604 | + | 2 | 24 | 212_242 | 5 | 931.0 | Zinc finger | RanBP2-type |
Hgene | RBM10 | chrX:47006897 | chr3:124951498 | ENST00000377604 | + | 2 | 24 | 759_784 | 5 | 931.0 | Zinc finger | C2H2-type%3B atypical |
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Fusion Gene Sequence for RBM10-ZNF148 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>72756_72756_1_RBM10-ZNF148_RBM10_chrX_47006897_ENST00000329236_ZNF148_chr3_124951498_ENST00000360647_length(transcript)=7490nt_BP=396nt GGTGGTCGGAGCGCCGACTCCCTTCTCGTCGTCGCCATTTTGAGCTGGTGACTGTGGCCGGCTGGGAGTAGGCGGCAGTGAGTTTCCCTG GGAGGGCAGCGCGCTTGGCGCTTCTCCCCTCCCCCCGATCTGCCTCCAGTCTCGGACTTGGTTGTTGCGCGCTCCGGCTCCGGCTGAGCT GGGAGAGTTGGAGGAGGTGGCGGCGGGCAGAGGTGATGTCTGGGAGCCCTTCCTTGACAGCCCGGGCCGAGAAGAGTCCCTGCAGGAAGC ATCACCCAGGCTGGCAGATCATGGTAGCAGCAGCGGGGGTGGCTGGGAAGTGAAACGGAGCCAGCGGCTGAGGAGGGGCCCCAGCAGCCC CCGAAGGCCCTATCAGGACATGGAGTATGAAAGACGGTGATGAGACAAACCATGCTTCTGCCACATCAACACAGGACTTTCTGGATCAAG TGACTTCTCAGAAGAAAGCTGAGGCCCAGCCTGTCCACCAAGCTTACCAAATGAGCTCCTTTGAACAGCCCTTCCGTGCTCCCTATCATG GATCAAGAGCTGGAATAGCTACTCAATTTAGCACTGCCAATGGACAGGTGAACCTTCGGGGACCAGGGACAAGTGCTGAATTTTCAGAAT TTCCCTTGGTGAATGTAAATGATAATAGAGCTGGGATGACATCTTCACCTGATGCCACAACTGGCCAGACTTTTGGCTAAAAAAAAAAAA AAAGTGTAAATAATACTGGCACTTTAGAACAGATTAATCAAGAGTGGGGTTACTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAA TGCGTAATAACAAGTTAAGCTGATATGAATAGCAAGATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTA CATGTTGTCACCTTTATAGAAGCAATGCATTACTTGTTTTAGATCAGAAACTTGCTATTCCACCCACACCAAGTTAAAAAGGAAAAAAAA AAGACTTTCGCACAATTGTTTCCTAACTGATAACATTGTACATTCTTAGGAGATTAGTAATTGTGTGAAATTTACTCATACTGTTTCTAA GTTTTTCAGCATAGTCATTGCACTTCAGCAGGGAATCTGAGTATACTTTACAGACAGAGTGAACTTAAAAGTTTAATGTCAAGAGATTAT GGCTTAAATAAATTAGTGTGTCCTATAGGGGGAAAAAAACCAAGAAACCACCTTTTAAAAAGAATGATATGCCATATACCCTTGATTTTC ATTTTGCATTATATTGACGTGTTTTTTTGAAGGAAAAAAAGTAATAAAAATCTGATAGTCTAAGACTCCACTATTTAAAAGCCTAATTAC TTTAAAAATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCACTTCTCTATGGAAGTATGCATATTGGTGTCA GTTTCTTTGTACAGTTGTACTTAGATATTTTTTATGATTTTTCATGTGCAGGTATCAAGGTTTTGAAGTTTTAGTAAAAGAAATTCTGTA GATTACATTCCCAAGAACATAATGCTTACACAAAATGTATATTCCACGTTTTAAAGCTTAATTGTATTTTACTTTACATATACACTTCAG TTAACATAGAGCACTTAGAATCTATTTGGTATTTTTGATTTCTCAAAGTAAAAAAAAAATTAGATTTTTAGGTTTGATATGGTTGTGTCA TAATCATCTCGTAATTGACAATTTTAACTTTTGGCAATAAAAGGAAATTGGGATATCTTTGGAACTGTAAAACCTGGTTTAATCTTTTTC TTTCTAGACTCTTGATAGATTGGATAATTAAACAGTATCCAGAGAAACTAAAGAAATGGGCATTTTAATTGCATATTTTATCTTGAGTTA CTTTTTAATGAACACTGCTCATTACAACTTTACAAACCAAAAGTGTTTACTAATTCCAGTAACTACCATTTCTTTTTCAGCTAGATGAGT GATCGGAAAATTTTTGTTGCATTTCAAAATCTAAATAAACTACAGACTTTATCCTTATACCATGAATGTTTTTTTTTAATACTCTGTCTT AAAATAATACAGCATGGTACAATAAATAGTGCTTTTATGTATATATACACACACACACTTTTCTGAAGAATGATGGTTTGAGTTATGCGT TGGGCAGTTTTGATTTTTGGAAGTTATATTAGTTATTGACTCTTTGTTACAACTTTTTCATTTTTACATTTTAAATTTTCTGCCATCGTT GTCACAATGCACATCCTGATATAGCACCAGTGAAAATCTAAAATTAATACCCTTGGAAAATGAAAATATTCTTAATTTCCATTTTGACTC TTATACTGGCCCTATAGCTCTGCAGTCTTTGTTTCAATATAGAATATGTTATCCATTTAAATTATTTTTTCTTTTATTTAATGTTATCCC AAGACTGTTCTCATAAAGAAAGGGAAGAAATAACTATCCACCCTTAACATCCTTCATTTATTTTGAATATATTGGTGTTTTTATGATAAG GAATATAAATTATATTTAATGTGGTTTCCTGTATACTTTGGTTATTAAGTTTTGCTTGAAATAGTAGTTTTCCCGTTTGACAGCTTTCTT TGCTGCCAAAGTTTTCAAGAATTTAAGACTTCTTTGAAGTAAATATTTAAGTTCTGCCATTATTGACTCTTAAGATTGTGTGTGTTGTGT TGTGCATTACATAATTACAAAAAGGCTTCATTCAGGTGATACGTTAAAAATGGAACTGTGCTCACCCTAAATAGGCATTGGTATTTTTCT CTTTTGGTGAGAGTAGGCATTTATTTCTTGAGTTGTTTTGGAGCCTGATCAAAAATTTTGTTCATGGAGAACTTGATGCAATTTTGATAC AGTGGAGAGGTTTTTTTCGGTTGTTTTAACATCACCAGCATAGTTTTTAGAATGTGACTCTTGCTGAGCATTTAGGGTGAGCTTGGGAAG GAAGGCCTTTGAAAATGGTAGTTATGCAAGCAGACTTTCAGGTGTTGCATTCCTGTTTTCAACACATTTCTTTAAATCTACATAATGGCA GACTTTTCTACCAGGTTATAAGCAGTTTTTAGATAAGTGATACTCAGCCAGCATAACTTATTGACTTACCATTTACGTATAGTCATCACT CTCTTACTGTGAAATTCCAAATGCCTACCAGAGTTACCTTGTTCTATCATAATATGACAAACATCTCAACAGTTTTGGATTTCCCCACTT TGGTTCAGAAGGTTATTTAATTTCTATCTGGGCATTAATGGAGAAAATAAGTAGCCTTGTGTGCTGCTTCAGATTGAAACATGGAGGATA TGAGATATTCTTCTGCAATTCATGTTTCTCATTTCTCAAAGTGAGCACATTGTTCTATAAAAACATGCTGGTACACCCTTAAACTTTTGA TCAATCTGAGTGAGGTGTGCTTTTCCTCTTGGGACCTACTCACGTTTGAAGATTGGAAACATCACGTTAGGCGAGGCAGTATCTCTTGAA CATCTTCTAAAGGGTTTTTTAAAACCTTATTCTCACATATTTCATTTGTCTTGAATATTTAAGTGGCTCTTAAACGTTTTGGGTCTACAT GCAAATGTGGTACTTAACAAGGTAGGAATCCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGTCAGGTCATTTTTATCTCAAGAG GCAGAAGGCAGTTATGTCAAGAATTGTGCTCAGGGCAGGATTTCGTTTCCACAGAGGAGAGACACTTGCAGAGTGCCAGCTAGGTTAGAT CTTTTGCCGCTTCTTTCATTTGATTAATTTGGGTTTTTAAAGGGCTGTTTAAAAAAAAAAAAAAAAGGCCGGGAAACTTTAAAAGTAGGC ATTACTGTAGTACTGCATTTCTTAGAACATTTTAAACTAGAACTCATTTTTTTTTCACAGTATATTTACTTGAAGAAGCACTATAATAAT CATTGAGAAGTATTTTGAGTCTGAAATTTAATTTAATTTTCCGTTTCAAATTGCTTTATTTCAGGGAAATAATTTTCCAGTTGTTTTGCT ATATTCTGCAAATAAAAACCGTGTTTCCTTTTTTCACTTAAACTTTGGTAGGAAACAAACTAAAGCAGACAAACATTTCTTGTTATGTTT GTTGCTTTCTTTAATCCAATGGATAAAAAAGTAAAACCCTGTAAACATTATTTTATTTTTTTATGCAATACCATGCTGTAAATATGGTTC ATCAAATAAGGATGTACCTATGATTGAATCTTTAATTCTGCACAGTTAGAGTTTATATATAAACGTGTCTTGACAATCAAGGACTTTTAT GTGAGTCTTCCTTTATGATGTTTATTAATGTTATGCATTCCATTTGTTTTGAAGTGAGTACCAATGTGCTAATTTGTATTGTCTGAAAGT ATGTAATGTTTTTACAGCTTGTTTTTAAGAATCTGTAAATATGTACAAACAAATCACAGTACTGCTTTATGTTAGAAGGCATATGATGTT GTACTGTATGTAAGCAATAATACATAGCAGTGCTAACTTTACAAGTAGCATCAGGAAAGTTCTAAAAACATTTCAGAGTTATTAATTATC CTTATTTCATTTAATAATGATTATCTTTAATCAGTTTTTATAAGCAAATTCCATTGTTCCTCCTATTGGAACGTAACACTGTTTACACAG CATAATTGAAGTTGCAGGGGAGACAGGCTAAATCTGACTTCATCTGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGC AAGATGGAGGAAGACCGCAAAACTTAGTGCCCATCACACTGAAGGAAGGGATGTGGTTTTTTTTCCTGCTTCTGTACTGCTACCTAACTT TGTGATTTGCTTTGGATTTTAATATTTGTTTCTGTTTTAGATTCAAGCCCGTAAGTTTTGAGGTGACTTCAGCTCCATTGTGAAATAGAT AGTTCTCTTCATATTTCATAACTACATTTCAATAATTCTAAACTTTCTACATTGATTTTTAGATACTTATTTTTCAAGCTTGGTTTCTCA GCTGATCAGATGAATTTATTCAACTTCAATACAAAGAAAGACAAACCTATTATAGTTTCAAGTGAGTAGATATTATACTGTACAGGACAG CTATTTGAACACACACATCACTGCTTTAGAAATAAAACCGCCAATTTATAAATGTATATGACCTACATTTTATAGGAAAAAATGTTTTTA AATGCTAGTCATTTATATAATGTGCTTTGAAGGATTTGCTAGTCCACTTCTGTCACTTTTTAGTACACTGGTATCTTTTATATGTAATGT ATGCTTTTTATTATTGTAGCAAAGCATTTCAGTAGAAAGAATTTTGCAACAATATGGGGGAAATTTTTCATTGTTGGATTTGAATTATAC TGGATTTTATCTGTGTAGTCTTACTTGTCTTTATTTTAATGCTGTCTGAAGGGAACTTGGTATCCAAATAAAGCAGGTAACCTCATTTTA CTTCAAGGGCATACTGTGTAGTGCTGAATTTAATCTGAAAATCTGATGATTTTGAAAAGAAAAACAAGTTTATAAACATTGTACAGAAGA AATTAAATGTGTGTGATGGAAATCCTGATGGTGGAGCACGTTGAATTTTCTGATATATAGTGTTATTTTCCTGGGATCCCCTATGCCTTC TTTGTATTTCAACTAATAAAGGAAAAACCCTGTCATTAAAACTGGTAAGATAATAGGATATTCTGATTATACAGTATTACTATTCCTATC CCATTTTCTGACCTTTTCTCAATCACTGTAAATTTTTATTTTCTATTTCCTATTGATAATTAAATATGTACATAATATAGACACTGTTGT ATAGAACTAAATGAATTGGGTTGCTATGCTTGAGTGGGTAGTGAAATGGAAATATTTGATGAATACTGAGAGTTCCTAAAATGCTAGAGC AAATTTCCGAGGGAAAGGGGGGCATCGTGTGTCTTGGGAAGGTTGCAGCAGGTTGTTTCTTCAACTCCCTAAGAAATCATTGGGAAGGAC TCAACTGCAAACTCGGGATCAGATACAAAATGGGTCTTTCCTTCCCCTCTCCCCCAAAAAATAGGAGCACTAAATTTTAAAATCTACTCA GGTGACAGTTGCTTTGCAATGAAACTTATCACATTGAAATTTTCAGTGTTAAATAAAAAGAGATTTGTGATATTTTTAAATATAAACTTT TACATCAGTAGTCAGCAGCCTGACAATTGAAATTTGGTAAGTCGATATATTTTAAAATATTTTGCTCTCCAAATAGAATTGTTTTTAAAC AATTGGGAGGTTTTTTGTTTCTTTAAATATGTTTTAATTGTCATTGTAAAAACAAAATCTTGCTTGACCCTATATTATGCCATGAATGAA TTGCTGAGCCTTTATAATACAGTGACAGCTTGTTTCATGCATAGTCATGGAACATAGAGATGTTCTTTAAACTGACCTATTGATAAGAGG TTTAATGAGTTTCACGGCTTTCAACACTATTGTCATATAGTTATCTTTGCCATTTGGAGTTTATAAAACCATTTTATGTATTGTGATACT AAAGGAAGTTGTTTTGCTTTACTTTAAATTGAATTATTAGACTAATATTTGCAAATTCTGCATTTTAAATGTGGACACTGGCTGTTTGAA AAATAAAATATAGAATACAGTTTTATGGATAATTTTCGAGCTGAATTTTTCACAATATTCTGAACCAAATAACGAATGGTAAATATGCAA AAATCATGGTGCATAGATATAACCGTAAAGAGAAAAGAATTTCTGTGTGGAATTAACAGTTACACAAATTGGGTAACAATTATCAGGGCC TTTATTATAGCTTTATGTGGAATGTTATTCTAAAATGCAAGAGTCAAATGTTACTGTCATTGAATATTTTAGACTTGAAACGTGTTTATC ATAGAGCGAAGAAAATATGTGTTCTTTTCTTTACAGATAAGACTCTGTTAACCCACTGTCAGCATACGTGGGATTTCTTTTCTTTTTTCT TTCATTAGTGGAGATTTGTTTTCATCCATCTACCACCTTGCCAGTACCCTAGCTTGTGACCAGCGGGATGCATTGTAAGAAAGTTGTCTG TGGTTAGGAGTGCAGTCTGGGTCCATGGAACAAATTTAAACTAATTGGCCCTCGCAATGATCAGTCCTAGGACCCTGGCCTTATTATTAG CATGGTGCTTTAACCAATTGTACATAATAATACCACTGATAGTCTACTAATGCATTTCCTAGATCCCAGTTTTTCTTGAATGATTAGGAA TGGTGGGGAGAGGGGAGGGGAGATATTCTACATGATACTTCTCCAATCTTCTAAAGATTATAAGAAAAAATAAAAAATTGAAGTCACTTG AATTAATGTGTTGTCATTGAGTCTTACTCGACAATTTATCATGCACAAAGTGATTATGAAGATTTTCCTGATTATATGTTTGGATTGAAT >72756_72756_1_RBM10-ZNF148_RBM10_chrX_47006897_ENST00000329236_ZNF148_chr3_124951498_ENST00000360647_length(amino acids)=137AA_BP= MVCLITVFHTPCPDRAFGGCWGPSSAAGSVSLPSHPRCCYHDLPAWVMLPAGTLLGPGCQGRAPRHHLCPPPPPPTLPAQPEPERATTKS -------------------------------------------------------------- >72756_72756_2_RBM10-ZNF148_RBM10_chrX_47006897_ENST00000329236_ZNF148_chr3_124951498_ENST00000484491_length(transcript)=975nt_BP=396nt GGTGGTCGGAGCGCCGACTCCCTTCTCGTCGTCGCCATTTTGAGCTGGTGACTGTGGCCGGCTGGGAGTAGGCGGCAGTGAGTTTCCCTG GGAGGGCAGCGCGCTTGGCGCTTCTCCCCTCCCCCCGATCTGCCTCCAGTCTCGGACTTGGTTGTTGCGCGCTCCGGCTCCGGCTGAGCT GGGAGAGTTGGAGGAGGTGGCGGCGGGCAGAGGTGATGTCTGGGAGCCCTTCCTTGACAGCCCGGGCCGAGAAGAGTCCCTGCAGGAAGC ATCACCCAGGCTGGCAGATCATGGTAGCAGCAGCGGGGGTGGCTGGGAAGTGAAACGGAGCCAGCGGCTGAGGAGGGGCCCCAGCAGCCC CCGAAGGCCCTATCAGGACATGGAGTATGAAAGACGGTGATGAGACAAACCATGCTTCTGCCACATCAACACAGGACTTTCTGGATCAAG TGACTTCTCAGAAGAAAGCTGAGGCCCAGCCTGTCCACCAAGCTTACCAAATGAGCTCCTTTGAACAGCCCTTCCGTGCTCCCTATCATG GATCAAGAGCTGGAATAGCTACTCAATTTAGCACTGCCAATGGACAGGTGAACCTTCGGGGACCAGGGACAAGTGCTGAATTTTCAGAAT TTCCCTTGGTGAATGTAAATGATAATAGAGCTGGGATGACATCTTCACCTGATGCCACAACTGGCCAGACTTTTGGCTAAAAAAAAAAAA AAAGTGTAAATAATACTGGCACTTTAGAACAGATTAATCAAGAGTGGGGTTACTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAA TGCGTAATAACAAGTTAAGCTGATATGAATAGCAAGATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTA >72756_72756_2_RBM10-ZNF148_RBM10_chrX_47006897_ENST00000329236_ZNF148_chr3_124951498_ENST00000484491_length(amino acids)=137AA_BP= MVCLITVFHTPCPDRAFGGCWGPSSAAGSVSLPSHPRCCYHDLPAWVMLPAGTLLGPGCQGRAPRHHLCPPPPPPTLPAQPEPERATTKS -------------------------------------------------------------- >72756_72756_3_RBM10-ZNF148_RBM10_chrX_47006897_ENST00000345781_ZNF148_chr3_124951498_ENST00000360647_length(transcript)=7443nt_BP=349nt GTGACTGTGGCCGGCTGGGAGTAGGCGGCAGTGAGTTTCCCTGGGAGGGCAGCGCGCTTGGCGCTTCTCCCCTCCCCCCGATCTGCCTCC AGTCTCGGACTTGGTTGTTGCGCGCTCCGGCTCCGGCTGAGCTGGGAGAGTTGGAGGAGGTGGCGGCGGGCAGAGGTGATGTCTGGGAGC CCTTCCTTGACAGCCCGGGCCGAGAAGAGTCCCTGCAGGAAGCATCACCCAGGCTGGCAGATCATGGTAGCAGCAGCGGGGGTGGCTGGG AAGTGAAACGGAGCCAGCGGCTGAGGAGGGGCCCCAGCAGCCCCCGAAGGCCCTATCAGGACATGGAGTATGAAAGACGGTGATGAGACA AACCATGCTTCTGCCACATCAACACAGGACTTTCTGGATCAAGTGACTTCTCAGAAGAAAGCTGAGGCCCAGCCTGTCCACCAAGCTTAC CAAATGAGCTCCTTTGAACAGCCCTTCCGTGCTCCCTATCATGGATCAAGAGCTGGAATAGCTACTCAATTTAGCACTGCCAATGGACAG GTGAACCTTCGGGGACCAGGGACAAGTGCTGAATTTTCAGAATTTCCCTTGGTGAATGTAAATGATAATAGAGCTGGGATGACATCTTCA CCTGATGCCACAACTGGCCAGACTTTTGGCTAAAAAAAAAAAAAAAGTGTAAATAATACTGGCACTTTAGAACAGATTAATCAAGAGTGG GGTTACTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATATGAATAGCAAGATAATCCAATA ACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAATGCATTACTTGTTTTAGATCAG AAACTTGCTATTCCACCCACACCAAGTTAAAAAGGAAAAAAAAAAGACTTTCGCACAATTGTTTCCTAACTGATAACATTGTACATTCTT AGGAGATTAGTAATTGTGTGAAATTTACTCATACTGTTTCTAAGTTTTTCAGCATAGTCATTGCACTTCAGCAGGGAATCTGAGTATACT TTACAGACAGAGTGAACTTAAAAGTTTAATGTCAAGAGATTATGGCTTAAATAAATTAGTGTGTCCTATAGGGGGAAAAAAACCAAGAAA CCACCTTTTAAAAAGAATGATATGCCATATACCCTTGATTTTCATTTTGCATTATATTGACGTGTTTTTTTGAAGGAAAAAAAGTAATAA AAATCTGATAGTCTAAGACTCCACTATTTAAAAGCCTAATTACTTTAAAAATATGCATACTTTCAGAACTTTTACCAAAACACACAACTG TTGAAGCAGTCACTTCTCTATGGAAGTATGCATATTGGTGTCAGTTTCTTTGTACAGTTGTACTTAGATATTTTTTATGATTTTTCATGT GCAGGTATCAAGGTTTTGAAGTTTTAGTAAAAGAAATTCTGTAGATTACATTCCCAAGAACATAATGCTTACACAAAATGTATATTCCAC GTTTTAAAGCTTAATTGTATTTTACTTTACATATACACTTCAGTTAACATAGAGCACTTAGAATCTATTTGGTATTTTTGATTTCTCAAA GTAAAAAAAAAATTAGATTTTTAGGTTTGATATGGTTGTGTCATAATCATCTCGTAATTGACAATTTTAACTTTTGGCAATAAAAGGAAA TTGGGATATCTTTGGAACTGTAAAACCTGGTTTAATCTTTTTCTTTCTAGACTCTTGATAGATTGGATAATTAAACAGTATCCAGAGAAA CTAAAGAAATGGGCATTTTAATTGCATATTTTATCTTGAGTTACTTTTTAATGAACACTGCTCATTACAACTTTACAAACCAAAAGTGTT TACTAATTCCAGTAACTACCATTTCTTTTTCAGCTAGATGAGTGATCGGAAAATTTTTGTTGCATTTCAAAATCTAAATAAACTACAGAC TTTATCCTTATACCATGAATGTTTTTTTTTAATACTCTGTCTTAAAATAATACAGCATGGTACAATAAATAGTGCTTTTATGTATATATA CACACACACACTTTTCTGAAGAATGATGGTTTGAGTTATGCGTTGGGCAGTTTTGATTTTTGGAAGTTATATTAGTTATTGACTCTTTGT TACAACTTTTTCATTTTTACATTTTAAATTTTCTGCCATCGTTGTCACAATGCACATCCTGATATAGCACCAGTGAAAATCTAAAATTAA TACCCTTGGAAAATGAAAATATTCTTAATTTCCATTTTGACTCTTATACTGGCCCTATAGCTCTGCAGTCTTTGTTTCAATATAGAATAT GTTATCCATTTAAATTATTTTTTCTTTTATTTAATGTTATCCCAAGACTGTTCTCATAAAGAAAGGGAAGAAATAACTATCCACCCTTAA CATCCTTCATTTATTTTGAATATATTGGTGTTTTTATGATAAGGAATATAAATTATATTTAATGTGGTTTCCTGTATACTTTGGTTATTA AGTTTTGCTTGAAATAGTAGTTTTCCCGTTTGACAGCTTTCTTTGCTGCCAAAGTTTTCAAGAATTTAAGACTTCTTTGAAGTAAATATT TAAGTTCTGCCATTATTGACTCTTAAGATTGTGTGTGTTGTGTTGTGCATTACATAATTACAAAAAGGCTTCATTCAGGTGATACGTTAA AAATGGAACTGTGCTCACCCTAAATAGGCATTGGTATTTTTCTCTTTTGGTGAGAGTAGGCATTTATTTCTTGAGTTGTTTTGGAGCCTG ATCAAAAATTTTGTTCATGGAGAACTTGATGCAATTTTGATACAGTGGAGAGGTTTTTTTCGGTTGTTTTAACATCACCAGCATAGTTTT TAGAATGTGACTCTTGCTGAGCATTTAGGGTGAGCTTGGGAAGGAAGGCCTTTGAAAATGGTAGTTATGCAAGCAGACTTTCAGGTGTTG CATTCCTGTTTTCAACACATTTCTTTAAATCTACATAATGGCAGACTTTTCTACCAGGTTATAAGCAGTTTTTAGATAAGTGATACTCAG CCAGCATAACTTATTGACTTACCATTTACGTATAGTCATCACTCTCTTACTGTGAAATTCCAAATGCCTACCAGAGTTACCTTGTTCTAT CATAATATGACAAACATCTCAACAGTTTTGGATTTCCCCACTTTGGTTCAGAAGGTTATTTAATTTCTATCTGGGCATTAATGGAGAAAA TAAGTAGCCTTGTGTGCTGCTTCAGATTGAAACATGGAGGATATGAGATATTCTTCTGCAATTCATGTTTCTCATTTCTCAAAGTGAGCA CATTGTTCTATAAAAACATGCTGGTACACCCTTAAACTTTTGATCAATCTGAGTGAGGTGTGCTTTTCCTCTTGGGACCTACTCACGTTT GAAGATTGGAAACATCACGTTAGGCGAGGCAGTATCTCTTGAACATCTTCTAAAGGGTTTTTTAAAACCTTATTCTCACATATTTCATTT GTCTTGAATATTTAAGTGGCTCTTAAACGTTTTGGGTCTACATGCAAATGTGGTACTTAACAAGGTAGGAATCCATCTTCTTAGCTCTGG CTGAGGGTGCCAGCCATCGGTCAGGTCATTTTTATCTCAAGAGGCAGAAGGCAGTTATGTCAAGAATTGTGCTCAGGGCAGGATTTCGTT TCCACAGAGGAGAGACACTTGCAGAGTGCCAGCTAGGTTAGATCTTTTGCCGCTTCTTTCATTTGATTAATTTGGGTTTTTAAAGGGCTG TTTAAAAAAAAAAAAAAAAGGCCGGGAAACTTTAAAAGTAGGCATTACTGTAGTACTGCATTTCTTAGAACATTTTAAACTAGAACTCAT TTTTTTTTCACAGTATATTTACTTGAAGAAGCACTATAATAATCATTGAGAAGTATTTTGAGTCTGAAATTTAATTTAATTTTCCGTTTC AAATTGCTTTATTTCAGGGAAATAATTTTCCAGTTGTTTTGCTATATTCTGCAAATAAAAACCGTGTTTCCTTTTTTCACTTAAACTTTG GTAGGAAACAAACTAAAGCAGACAAACATTTCTTGTTATGTTTGTTGCTTTCTTTAATCCAATGGATAAAAAAGTAAAACCCTGTAAACA TTATTTTATTTTTTTATGCAATACCATGCTGTAAATATGGTTCATCAAATAAGGATGTACCTATGATTGAATCTTTAATTCTGCACAGTT AGAGTTTATATATAAACGTGTCTTGACAATCAAGGACTTTTATGTGAGTCTTCCTTTATGATGTTTATTAATGTTATGCATTCCATTTGT TTTGAAGTGAGTACCAATGTGCTAATTTGTATTGTCTGAAAGTATGTAATGTTTTTACAGCTTGTTTTTAAGAATCTGTAAATATGTACA AACAAATCACAGTACTGCTTTATGTTAGAAGGCATATGATGTTGTACTGTATGTAAGCAATAATACATAGCAGTGCTAACTTTACAAGTA GCATCAGGAAAGTTCTAAAAACATTTCAGAGTTATTAATTATCCTTATTTCATTTAATAATGATTATCTTTAATCAGTTTTTATAAGCAA ATTCCATTGTTCCTCCTATTGGAACGTAACACTGTTTACACAGCATAATTGAAGTTGCAGGGGAGACAGGCTAAATCTGACTTCATCTGT ACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTCTGCAAGATGGAGGAAGACCGCAAAACTTAGTGCCCATCACACTGAAGGAA GGGATGTGGTTTTTTTTCCTGCTTCTGTACTGCTACCTAACTTTGTGATTTGCTTTGGATTTTAATATTTGTTTCTGTTTTAGATTCAAG CCCGTAAGTTTTGAGGTGACTTCAGCTCCATTGTGAAATAGATAGTTCTCTTCATATTTCATAACTACATTTCAATAATTCTAAACTTTC TACATTGATTTTTAGATACTTATTTTTCAAGCTTGGTTTCTCAGCTGATCAGATGAATTTATTCAACTTCAATACAAAGAAAGACAAACC TATTATAGTTTCAAGTGAGTAGATATTATACTGTACAGGACAGCTATTTGAACACACACATCACTGCTTTAGAAATAAAACCGCCAATTT ATAAATGTATATGACCTACATTTTATAGGAAAAAATGTTTTTAAATGCTAGTCATTTATATAATGTGCTTTGAAGGATTTGCTAGTCCAC TTCTGTCACTTTTTAGTACACTGGTATCTTTTATATGTAATGTATGCTTTTTATTATTGTAGCAAAGCATTTCAGTAGAAAGAATTTTGC AACAATATGGGGGAAATTTTTCATTGTTGGATTTGAATTATACTGGATTTTATCTGTGTAGTCTTACTTGTCTTTATTTTAATGCTGTCT GAAGGGAACTTGGTATCCAAATAAAGCAGGTAACCTCATTTTACTTCAAGGGCATACTGTGTAGTGCTGAATTTAATCTGAAAATCTGAT GATTTTGAAAAGAAAAACAAGTTTATAAACATTGTACAGAAGAAATTAAATGTGTGTGATGGAAATCCTGATGGTGGAGCACGTTGAATT TTCTGATATATAGTGTTATTTTCCTGGGATCCCCTATGCCTTCTTTGTATTTCAACTAATAAAGGAAAAACCCTGTCATTAAAACTGGTA AGATAATAGGATATTCTGATTATACAGTATTACTATTCCTATCCCATTTTCTGACCTTTTCTCAATCACTGTAAATTTTTATTTTCTATT TCCTATTGATAATTAAATATGTACATAATATAGACACTGTTGTATAGAACTAAATGAATTGGGTTGCTATGCTTGAGTGGGTAGTGAAAT GGAAATATTTGATGAATACTGAGAGTTCCTAAAATGCTAGAGCAAATTTCCGAGGGAAAGGGGGGCATCGTGTGTCTTGGGAAGGTTGCA GCAGGTTGTTTCTTCAACTCCCTAAGAAATCATTGGGAAGGACTCAACTGCAAACTCGGGATCAGATACAAAATGGGTCTTTCCTTCCCC TCTCCCCCAAAAAATAGGAGCACTAAATTTTAAAATCTACTCAGGTGACAGTTGCTTTGCAATGAAACTTATCACATTGAAATTTTCAGT GTTAAATAAAAAGAGATTTGTGATATTTTTAAATATAAACTTTTACATCAGTAGTCAGCAGCCTGACAATTGAAATTTGGTAAGTCGATA TATTTTAAAATATTTTGCTCTCCAAATAGAATTGTTTTTAAACAATTGGGAGGTTTTTTGTTTCTTTAAATATGTTTTAATTGTCATTGT AAAAACAAAATCTTGCTTGACCCTATATTATGCCATGAATGAATTGCTGAGCCTTTATAATACAGTGACAGCTTGTTTCATGCATAGTCA TGGAACATAGAGATGTTCTTTAAACTGACCTATTGATAAGAGGTTTAATGAGTTTCACGGCTTTCAACACTATTGTCATATAGTTATCTT TGCCATTTGGAGTTTATAAAACCATTTTATGTATTGTGATACTAAAGGAAGTTGTTTTGCTTTACTTTAAATTGAATTATTAGACTAATA TTTGCAAATTCTGCATTTTAAATGTGGACACTGGCTGTTTGAAAAATAAAATATAGAATACAGTTTTATGGATAATTTTCGAGCTGAATT TTTCACAATATTCTGAACCAAATAACGAATGGTAAATATGCAAAAATCATGGTGCATAGATATAACCGTAAAGAGAAAAGAATTTCTGTG TGGAATTAACAGTTACACAAATTGGGTAACAATTATCAGGGCCTTTATTATAGCTTTATGTGGAATGTTATTCTAAAATGCAAGAGTCAA ATGTTACTGTCATTGAATATTTTAGACTTGAAACGTGTTTATCATAGAGCGAAGAAAATATGTGTTCTTTTCTTTACAGATAAGACTCTG TTAACCCACTGTCAGCATACGTGGGATTTCTTTTCTTTTTTCTTTCATTAGTGGAGATTTGTTTTCATCCATCTACCACCTTGCCAGTAC CCTAGCTTGTGACCAGCGGGATGCATTGTAAGAAAGTTGTCTGTGGTTAGGAGTGCAGTCTGGGTCCATGGAACAAATTTAAACTAATTG GCCCTCGCAATGATCAGTCCTAGGACCCTGGCCTTATTATTAGCATGGTGCTTTAACCAATTGTACATAATAATACCACTGATAGTCTAC TAATGCATTTCCTAGATCCCAGTTTTTCTTGAATGATTAGGAATGGTGGGGAGAGGGGAGGGGAGATATTCTACATGATACTTCTCCAAT CTTCTAAAGATTATAAGAAAAAATAAAAAATTGAAGTCACTTGAATTAATGTGTTGTCATTGAGTCTTACTCGACAATTTATCATGCACA >72756_72756_3_RBM10-ZNF148_RBM10_chrX_47006897_ENST00000345781_ZNF148_chr3_124951498_ENST00000360647_length(amino acids)=122AA_BP= MVCLITVFHTPCPDRAFGGCWGPSSAAGSVSLPSHPRCCYHDLPAWVMLPAGTLLGPGCQGRAPRHHLCPPPPPPTLPAQPEPERATTKS -------------------------------------------------------------- >72756_72756_4_RBM10-ZNF148_RBM10_chrX_47006897_ENST00000345781_ZNF148_chr3_124951498_ENST00000484491_length(transcript)=928nt_BP=349nt GTGACTGTGGCCGGCTGGGAGTAGGCGGCAGTGAGTTTCCCTGGGAGGGCAGCGCGCTTGGCGCTTCTCCCCTCCCCCCGATCTGCCTCC AGTCTCGGACTTGGTTGTTGCGCGCTCCGGCTCCGGCTGAGCTGGGAGAGTTGGAGGAGGTGGCGGCGGGCAGAGGTGATGTCTGGGAGC CCTTCCTTGACAGCCCGGGCCGAGAAGAGTCCCTGCAGGAAGCATCACCCAGGCTGGCAGATCATGGTAGCAGCAGCGGGGGTGGCTGGG AAGTGAAACGGAGCCAGCGGCTGAGGAGGGGCCCCAGCAGCCCCCGAAGGCCCTATCAGGACATGGAGTATGAAAGACGGTGATGAGACA AACCATGCTTCTGCCACATCAACACAGGACTTTCTGGATCAAGTGACTTCTCAGAAGAAAGCTGAGGCCCAGCCTGTCCACCAAGCTTAC CAAATGAGCTCCTTTGAACAGCCCTTCCGTGCTCCCTATCATGGATCAAGAGCTGGAATAGCTACTCAATTTAGCACTGCCAATGGACAG GTGAACCTTCGGGGACCAGGGACAAGTGCTGAATTTTCAGAATTTCCCTTGGTGAATGTAAATGATAATAGAGCTGGGATGACATCTTCA CCTGATGCCACAACTGGCCAGACTTTTGGCTAAAAAAAAAAAAAAAGTGTAAATAATACTGGCACTTTAGAACAGATTAATCAAGAGTGG GGTTACTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAGCAATGCGTAATAACAAGTTAAGCTGATATGAATAGCAAGATAATCCAATA ACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCCTTACATGTTGTCACCTTTATAGAAGCAATGCATTACTTGTTTTAGATCAG >72756_72756_4_RBM10-ZNF148_RBM10_chrX_47006897_ENST00000345781_ZNF148_chr3_124951498_ENST00000484491_length(amino acids)=122AA_BP= MVCLITVFHTPCPDRAFGGCWGPSSAAGSVSLPSHPRCCYHDLPAWVMLPAGTLLGPGCQGRAPRHHLCPPPPPPTLPAQPEPERATTKS -------------------------------------------------------------- >72756_72756_5_RBM10-ZNF148_RBM10_chrX_47006897_ENST00000377604_ZNF148_chr3_124951498_ENST00000360647_length(transcript)=7853nt_BP=759nt GCCAACCATTTTCGGCCAGGCTGAGAAATTTCTTATTGATGGGTCTGCTCATTTCCTGCATAGGAAGAAATCGGTGACATTTGGGTGGAT ACAGTTCCCAGCCAATCGCCCCGAGTTCCCTCGCCCACTGGGGAAAGAGGCAGAGCTTCCGCTAGTCTTTCATCTTCAAAGGAAATCAAG CTTCTAAAAAGCGGGCCCTGCCGAATTGGCTAATAGCTACTCCTTTTCTCCACTAGGGGAGCGTTCGCAAGGGGTGTGGGGAGGTGGCCA GCGCTTGCCAATCAGAGGAGGCCAGGGCTGTCCCCTAGCGGGCGGTGACCAATCGCCGGGGCCGGCCAGAGCGCGCTTCCTTAGTAGGTG GATGGTGGTCGGAGCGCCGACTCCCTTCTCGTCGTCGCCATTTTGAGCTGGTGACTGTGGCCGGCTGGGAGTAGGCGGCAGTGAGTTTCC CTGGGAGGGCAGCGCGCTTGGCGCTTCTCCCCTCCCCCCGATCTGCCTCCAGTCTCGGACTTGGTTGTTGCGCGCTCCGGCTCCGGCTGA GCTGGGAGAGTTGGAGGAGGTGGCGGCGGGCAGAGGTGATGTCTGGGAGCCCTTCCTTGACAGCCCGGGCCGAGAAGAGTCCCTGCAGGA AGCATCACCCAGGCTGGCAGATCATGGTAGCAGCAGCGGGGGTGGCTGGGAAGTGAAACGGAGCCAGCGGCTGAGGAGGGGCCCCAGCAG CCCCCGAAGGCCCTATCAGGACATGGAGTATGAAAGACGGTGATGAGACAAACCATGCTTCTGCCACATCAACACAGGACTTTCTGGATC AAGTGACTTCTCAGAAGAAAGCTGAGGCCCAGCCTGTCCACCAAGCTTACCAAATGAGCTCCTTTGAACAGCCCTTCCGTGCTCCCTATC ATGGATCAAGAGCTGGAATAGCTACTCAATTTAGCACTGCCAATGGACAGGTGAACCTTCGGGGACCAGGGACAAGTGCTGAATTTTCAG AATTTCCCTTGGTGAATGTAAATGATAATAGAGCTGGGATGACATCTTCACCTGATGCCACAACTGGCCAGACTTTTGGCTAAAAAAAAA AAAAAAGTGTAAATAATACTGGCACTTTAGAACAGATTAATCAAGAGTGGGGTTACTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAG CAATGCGTAATAACAAGTTAAGCTGATATGAATAGCAAGATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCC TTACATGTTGTCACCTTTATAGAAGCAATGCATTACTTGTTTTAGATCAGAAACTTGCTATTCCACCCACACCAAGTTAAAAAGGAAAAA AAAAAGACTTTCGCACAATTGTTTCCTAACTGATAACATTGTACATTCTTAGGAGATTAGTAATTGTGTGAAATTTACTCATACTGTTTC TAAGTTTTTCAGCATAGTCATTGCACTTCAGCAGGGAATCTGAGTATACTTTACAGACAGAGTGAACTTAAAAGTTTAATGTCAAGAGAT TATGGCTTAAATAAATTAGTGTGTCCTATAGGGGGAAAAAAACCAAGAAACCACCTTTTAAAAAGAATGATATGCCATATACCCTTGATT TTCATTTTGCATTATATTGACGTGTTTTTTTGAAGGAAAAAAAGTAATAAAAATCTGATAGTCTAAGACTCCACTATTTAAAAGCCTAAT TACTTTAAAAATATGCATACTTTCAGAACTTTTACCAAAACACACAACTGTTGAAGCAGTCACTTCTCTATGGAAGTATGCATATTGGTG TCAGTTTCTTTGTACAGTTGTACTTAGATATTTTTTATGATTTTTCATGTGCAGGTATCAAGGTTTTGAAGTTTTAGTAAAAGAAATTCT GTAGATTACATTCCCAAGAACATAATGCTTACACAAAATGTATATTCCACGTTTTAAAGCTTAATTGTATTTTACTTTACATATACACTT CAGTTAACATAGAGCACTTAGAATCTATTTGGTATTTTTGATTTCTCAAAGTAAAAAAAAAATTAGATTTTTAGGTTTGATATGGTTGTG TCATAATCATCTCGTAATTGACAATTTTAACTTTTGGCAATAAAAGGAAATTGGGATATCTTTGGAACTGTAAAACCTGGTTTAATCTTT TTCTTTCTAGACTCTTGATAGATTGGATAATTAAACAGTATCCAGAGAAACTAAAGAAATGGGCATTTTAATTGCATATTTTATCTTGAG TTACTTTTTAATGAACACTGCTCATTACAACTTTACAAACCAAAAGTGTTTACTAATTCCAGTAACTACCATTTCTTTTTCAGCTAGATG AGTGATCGGAAAATTTTTGTTGCATTTCAAAATCTAAATAAACTACAGACTTTATCCTTATACCATGAATGTTTTTTTTTAATACTCTGT CTTAAAATAATACAGCATGGTACAATAAATAGTGCTTTTATGTATATATACACACACACACTTTTCTGAAGAATGATGGTTTGAGTTATG CGTTGGGCAGTTTTGATTTTTGGAAGTTATATTAGTTATTGACTCTTTGTTACAACTTTTTCATTTTTACATTTTAAATTTTCTGCCATC GTTGTCACAATGCACATCCTGATATAGCACCAGTGAAAATCTAAAATTAATACCCTTGGAAAATGAAAATATTCTTAATTTCCATTTTGA CTCTTATACTGGCCCTATAGCTCTGCAGTCTTTGTTTCAATATAGAATATGTTATCCATTTAAATTATTTTTTCTTTTATTTAATGTTAT CCCAAGACTGTTCTCATAAAGAAAGGGAAGAAATAACTATCCACCCTTAACATCCTTCATTTATTTTGAATATATTGGTGTTTTTATGAT AAGGAATATAAATTATATTTAATGTGGTTTCCTGTATACTTTGGTTATTAAGTTTTGCTTGAAATAGTAGTTTTCCCGTTTGACAGCTTT CTTTGCTGCCAAAGTTTTCAAGAATTTAAGACTTCTTTGAAGTAAATATTTAAGTTCTGCCATTATTGACTCTTAAGATTGTGTGTGTTG TGTTGTGCATTACATAATTACAAAAAGGCTTCATTCAGGTGATACGTTAAAAATGGAACTGTGCTCACCCTAAATAGGCATTGGTATTTT TCTCTTTTGGTGAGAGTAGGCATTTATTTCTTGAGTTGTTTTGGAGCCTGATCAAAAATTTTGTTCATGGAGAACTTGATGCAATTTTGA TACAGTGGAGAGGTTTTTTTCGGTTGTTTTAACATCACCAGCATAGTTTTTAGAATGTGACTCTTGCTGAGCATTTAGGGTGAGCTTGGG AAGGAAGGCCTTTGAAAATGGTAGTTATGCAAGCAGACTTTCAGGTGTTGCATTCCTGTTTTCAACACATTTCTTTAAATCTACATAATG GCAGACTTTTCTACCAGGTTATAAGCAGTTTTTAGATAAGTGATACTCAGCCAGCATAACTTATTGACTTACCATTTACGTATAGTCATC ACTCTCTTACTGTGAAATTCCAAATGCCTACCAGAGTTACCTTGTTCTATCATAATATGACAAACATCTCAACAGTTTTGGATTTCCCCA CTTTGGTTCAGAAGGTTATTTAATTTCTATCTGGGCATTAATGGAGAAAATAAGTAGCCTTGTGTGCTGCTTCAGATTGAAACATGGAGG ATATGAGATATTCTTCTGCAATTCATGTTTCTCATTTCTCAAAGTGAGCACATTGTTCTATAAAAACATGCTGGTACACCCTTAAACTTT TGATCAATCTGAGTGAGGTGTGCTTTTCCTCTTGGGACCTACTCACGTTTGAAGATTGGAAACATCACGTTAGGCGAGGCAGTATCTCTT GAACATCTTCTAAAGGGTTTTTTAAAACCTTATTCTCACATATTTCATTTGTCTTGAATATTTAAGTGGCTCTTAAACGTTTTGGGTCTA CATGCAAATGTGGTACTTAACAAGGTAGGAATCCATCTTCTTAGCTCTGGCTGAGGGTGCCAGCCATCGGTCAGGTCATTTTTATCTCAA GAGGCAGAAGGCAGTTATGTCAAGAATTGTGCTCAGGGCAGGATTTCGTTTCCACAGAGGAGAGACACTTGCAGAGTGCCAGCTAGGTTA GATCTTTTGCCGCTTCTTTCATTTGATTAATTTGGGTTTTTAAAGGGCTGTTTAAAAAAAAAAAAAAAAGGCCGGGAAACTTTAAAAGTA GGCATTACTGTAGTACTGCATTTCTTAGAACATTTTAAACTAGAACTCATTTTTTTTTCACAGTATATTTACTTGAAGAAGCACTATAAT AATCATTGAGAAGTATTTTGAGTCTGAAATTTAATTTAATTTTCCGTTTCAAATTGCTTTATTTCAGGGAAATAATTTTCCAGTTGTTTT GCTATATTCTGCAAATAAAAACCGTGTTTCCTTTTTTCACTTAAACTTTGGTAGGAAACAAACTAAAGCAGACAAACATTTCTTGTTATG TTTGTTGCTTTCTTTAATCCAATGGATAAAAAAGTAAAACCCTGTAAACATTATTTTATTTTTTTATGCAATACCATGCTGTAAATATGG TTCATCAAATAAGGATGTACCTATGATTGAATCTTTAATTCTGCACAGTTAGAGTTTATATATAAACGTGTCTTGACAATCAAGGACTTT TATGTGAGTCTTCCTTTATGATGTTTATTAATGTTATGCATTCCATTTGTTTTGAAGTGAGTACCAATGTGCTAATTTGTATTGTCTGAA AGTATGTAATGTTTTTACAGCTTGTTTTTAAGAATCTGTAAATATGTACAAACAAATCACAGTACTGCTTTATGTTAGAAGGCATATGAT GTTGTACTGTATGTAAGCAATAATACATAGCAGTGCTAACTTTACAAGTAGCATCAGGAAAGTTCTAAAAACATTTCAGAGTTATTAATT ATCCTTATTTCATTTAATAATGATTATCTTTAATCAGTTTTTATAAGCAAATTCCATTGTTCCTCCTATTGGAACGTAACACTGTTTACA CAGCATAATTGAAGTTGCAGGGGAGACAGGCTAAATCTGACTTCATCTGTACTCACTTTCACTAAGCATTGAATGGCCTTACCACTCTTC TGCAAGATGGAGGAAGACCGCAAAACTTAGTGCCCATCACACTGAAGGAAGGGATGTGGTTTTTTTTCCTGCTTCTGTACTGCTACCTAA CTTTGTGATTTGCTTTGGATTTTAATATTTGTTTCTGTTTTAGATTCAAGCCCGTAAGTTTTGAGGTGACTTCAGCTCCATTGTGAAATA GATAGTTCTCTTCATATTTCATAACTACATTTCAATAATTCTAAACTTTCTACATTGATTTTTAGATACTTATTTTTCAAGCTTGGTTTC TCAGCTGATCAGATGAATTTATTCAACTTCAATACAAAGAAAGACAAACCTATTATAGTTTCAAGTGAGTAGATATTATACTGTACAGGA CAGCTATTTGAACACACACATCACTGCTTTAGAAATAAAACCGCCAATTTATAAATGTATATGACCTACATTTTATAGGAAAAAATGTTT TTAAATGCTAGTCATTTATATAATGTGCTTTGAAGGATTTGCTAGTCCACTTCTGTCACTTTTTAGTACACTGGTATCTTTTATATGTAA TGTATGCTTTTTATTATTGTAGCAAAGCATTTCAGTAGAAAGAATTTTGCAACAATATGGGGGAAATTTTTCATTGTTGGATTTGAATTA TACTGGATTTTATCTGTGTAGTCTTACTTGTCTTTATTTTAATGCTGTCTGAAGGGAACTTGGTATCCAAATAAAGCAGGTAACCTCATT TTACTTCAAGGGCATACTGTGTAGTGCTGAATTTAATCTGAAAATCTGATGATTTTGAAAAGAAAAACAAGTTTATAAACATTGTACAGA AGAAATTAAATGTGTGTGATGGAAATCCTGATGGTGGAGCACGTTGAATTTTCTGATATATAGTGTTATTTTCCTGGGATCCCCTATGCC TTCTTTGTATTTCAACTAATAAAGGAAAAACCCTGTCATTAAAACTGGTAAGATAATAGGATATTCTGATTATACAGTATTACTATTCCT ATCCCATTTTCTGACCTTTTCTCAATCACTGTAAATTTTTATTTTCTATTTCCTATTGATAATTAAATATGTACATAATATAGACACTGT TGTATAGAACTAAATGAATTGGGTTGCTATGCTTGAGTGGGTAGTGAAATGGAAATATTTGATGAATACTGAGAGTTCCTAAAATGCTAG AGCAAATTTCCGAGGGAAAGGGGGGCATCGTGTGTCTTGGGAAGGTTGCAGCAGGTTGTTTCTTCAACTCCCTAAGAAATCATTGGGAAG GACTCAACTGCAAACTCGGGATCAGATACAAAATGGGTCTTTCCTTCCCCTCTCCCCCAAAAAATAGGAGCACTAAATTTTAAAATCTAC TCAGGTGACAGTTGCTTTGCAATGAAACTTATCACATTGAAATTTTCAGTGTTAAATAAAAAGAGATTTGTGATATTTTTAAATATAAAC TTTTACATCAGTAGTCAGCAGCCTGACAATTGAAATTTGGTAAGTCGATATATTTTAAAATATTTTGCTCTCCAAATAGAATTGTTTTTA AACAATTGGGAGGTTTTTTGTTTCTTTAAATATGTTTTAATTGTCATTGTAAAAACAAAATCTTGCTTGACCCTATATTATGCCATGAAT GAATTGCTGAGCCTTTATAATACAGTGACAGCTTGTTTCATGCATAGTCATGGAACATAGAGATGTTCTTTAAACTGACCTATTGATAAG AGGTTTAATGAGTTTCACGGCTTTCAACACTATTGTCATATAGTTATCTTTGCCATTTGGAGTTTATAAAACCATTTTATGTATTGTGAT ACTAAAGGAAGTTGTTTTGCTTTACTTTAAATTGAATTATTAGACTAATATTTGCAAATTCTGCATTTTAAATGTGGACACTGGCTGTTT GAAAAATAAAATATAGAATACAGTTTTATGGATAATTTTCGAGCTGAATTTTTCACAATATTCTGAACCAAATAACGAATGGTAAATATG CAAAAATCATGGTGCATAGATATAACCGTAAAGAGAAAAGAATTTCTGTGTGGAATTAACAGTTACACAAATTGGGTAACAATTATCAGG GCCTTTATTATAGCTTTATGTGGAATGTTATTCTAAAATGCAAGAGTCAAATGTTACTGTCATTGAATATTTTAGACTTGAAACGTGTTT ATCATAGAGCGAAGAAAATATGTGTTCTTTTCTTTACAGATAAGACTCTGTTAACCCACTGTCAGCATACGTGGGATTTCTTTTCTTTTT TCTTTCATTAGTGGAGATTTGTTTTCATCCATCTACCACCTTGCCAGTACCCTAGCTTGTGACCAGCGGGATGCATTGTAAGAAAGTTGT CTGTGGTTAGGAGTGCAGTCTGGGTCCATGGAACAAATTTAAACTAATTGGCCCTCGCAATGATCAGTCCTAGGACCCTGGCCTTATTAT TAGCATGGTGCTTTAACCAATTGTACATAATAATACCACTGATAGTCTACTAATGCATTTCCTAGATCCCAGTTTTTCTTGAATGATTAG GAATGGTGGGGAGAGGGGAGGGGAGATATTCTACATGATACTTCTCCAATCTTCTAAAGATTATAAGAAAAAATAAAAAATTGAAGTCAC TTGAATTAATGTGTTGTCATTGAGTCTTACTCGACAATTTATCATGCACAAAGTGATTATGAAGATTTTCCTGATTATATGTTTGGATTG >72756_72756_5_RBM10-ZNF148_RBM10_chrX_47006897_ENST00000377604_ZNF148_chr3_124951498_ENST00000360647_length(amino acids)=141AA_BP= MVCLITVFHTPCPDRAFGGCWGPSSAAGSVSLPSHPRCCYHDLPAWVMLPAGTLLGPGCQGRAPRHHLCPPPPPPTLPAQPEPERATTKS -------------------------------------------------------------- >72756_72756_6_RBM10-ZNF148_RBM10_chrX_47006897_ENST00000377604_ZNF148_chr3_124951498_ENST00000484491_length(transcript)=1338nt_BP=759nt GCCAACCATTTTCGGCCAGGCTGAGAAATTTCTTATTGATGGGTCTGCTCATTTCCTGCATAGGAAGAAATCGGTGACATTTGGGTGGAT ACAGTTCCCAGCCAATCGCCCCGAGTTCCCTCGCCCACTGGGGAAAGAGGCAGAGCTTCCGCTAGTCTTTCATCTTCAAAGGAAATCAAG CTTCTAAAAAGCGGGCCCTGCCGAATTGGCTAATAGCTACTCCTTTTCTCCACTAGGGGAGCGTTCGCAAGGGGTGTGGGGAGGTGGCCA GCGCTTGCCAATCAGAGGAGGCCAGGGCTGTCCCCTAGCGGGCGGTGACCAATCGCCGGGGCCGGCCAGAGCGCGCTTCCTTAGTAGGTG GATGGTGGTCGGAGCGCCGACTCCCTTCTCGTCGTCGCCATTTTGAGCTGGTGACTGTGGCCGGCTGGGAGTAGGCGGCAGTGAGTTTCC CTGGGAGGGCAGCGCGCTTGGCGCTTCTCCCCTCCCCCCGATCTGCCTCCAGTCTCGGACTTGGTTGTTGCGCGCTCCGGCTCCGGCTGA GCTGGGAGAGTTGGAGGAGGTGGCGGCGGGCAGAGGTGATGTCTGGGAGCCCTTCCTTGACAGCCCGGGCCGAGAAGAGTCCCTGCAGGA AGCATCACCCAGGCTGGCAGATCATGGTAGCAGCAGCGGGGGTGGCTGGGAAGTGAAACGGAGCCAGCGGCTGAGGAGGGGCCCCAGCAG CCCCCGAAGGCCCTATCAGGACATGGAGTATGAAAGACGGTGATGAGACAAACCATGCTTCTGCCACATCAACACAGGACTTTCTGGATC AAGTGACTTCTCAGAAGAAAGCTGAGGCCCAGCCTGTCCACCAAGCTTACCAAATGAGCTCCTTTGAACAGCCCTTCCGTGCTCCCTATC ATGGATCAAGAGCTGGAATAGCTACTCAATTTAGCACTGCCAATGGACAGGTGAACCTTCGGGGACCAGGGACAAGTGCTGAATTTTCAG AATTTCCCTTGGTGAATGTAAATGATAATAGAGCTGGGATGACATCTTCACCTGATGCCACAACTGGCCAGACTTTTGGCTAAAAAAAAA AAAAAAGTGTAAATAATACTGGCACTTTAGAACAGATTAATCAAGAGTGGGGTTACTCTGTGTAAATGGAGTGCTGTACAGATTTAAGAG CAATGCGTAATAACAAGTTAAGCTGATATGAATAGCAAGATAATCCAATAACTGCATTTCGTTTGGTTAGTCAGCATTCTTTGAACTGCC >72756_72756_6_RBM10-ZNF148_RBM10_chrX_47006897_ENST00000377604_ZNF148_chr3_124951498_ENST00000484491_length(amino acids)=141AA_BP= MGDASCRDSSRPGLSRKGSQTSPLPAATSSNSPSSAGAGARNNQVRDWRQIGGRGEAPSALPSQGNSLPPTPSRPQSPAQNGDDEKGVGA -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for RBM10-ZNF148 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for RBM10-ZNF148 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for RBM10-ZNF148 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | RBM10 | C1839463 | TARP syndrome | 4 | CTD_human;GENOMICS_ENGLAND;ORPHANET |
Hgene | RBM10 | C0008925 | Cleft Palate | 1 | GENOMICS_ENGLAND |
Hgene | RBM10 | C0152427 | Polydactyly | 1 | GENOMICS_ENGLAND |
Tgene | C4310644 | GLOBAL DEVELOPMENTAL DELAY, ABSENT OR HYPOPLASTIC CORPUS CALLOSUM, AND DYSMORPHIC FACIES | 1 | CTD_human;GENOMICS_ENGLAND |