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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:FOXN3-SLC25A21 (FusionGDB2 ID:HG1112TG89874) |
Fusion Gene Summary for FOXN3-SLC25A21 |
Fusion gene summary |
Fusion gene information | Fusion gene name: FOXN3-SLC25A21 | Fusion gene ID: hg1112tg89874 | Hgene | Tgene | Gene symbol | FOXN3 | SLC25A21 | Gene ID | 1112 | 89874 |
Gene name | forkhead box N3 | solute carrier family 25 member 21 | |
Synonyms | C14orf116|CHES1|PRO1635 | MTDPS18|ODC|ODC1 | |
Cytomap | ('FOXN3')('SLC25A21') 14q31.3-q32.11 | 14q13.3 | |
Type of gene | protein-coding | protein-coding | |
Description | forkhead box protein N3checkpoint suppressor 1 | mitochondrial 2-oxodicarboxylate carrieroxodicarboxylate carriersolute carrier family 25 (mitochondrial oxoadipate carrier), member 21solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21 | |
Modification date | 20200313 | 20200328 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000261302, ENST00000345097, ENST00000555353, ENST00000557258, ENST00000555658, | ||
Fusion gene scores | * DoF score | 21 X 18 X 8=3024 | 9 X 5 X 6=270 |
# samples | 22 | 11 | |
** MAII score | log2(22/3024*10)=-3.78088271069641 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(11/270*10)=-1.29545588352617 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: FOXN3 [Title/Abstract] AND SLC25A21 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | FOXN3(89656728)-SLC25A21(37344209), # samples:3 | ||
Anticipated loss of major functional domain due to fusion event. | FOXN3-SLC25A21 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. FOXN3-SLC25A21 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. FOXN3-SLC25A21 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. FOXN3-SLC25A21 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. FOXN3-SLC25A21 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. FOXN3-SLC25A21 seems lost the major protein functional domain in Hgene partner, which is a transcription factor due to the frame-shifted ORF. FOXN3-SLC25A21 seems lost the major protein functional domain in Tgene partner, which is a cell metabolism gene due to the frame-shifted ORF. FOXN3-SLC25A21 seems lost the major protein functional domain in Tgene partner, which is a IUPHAR drug target due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | FOXN3 | GO:0045892 | negative regulation of transcription, DNA-templated | 16102918 |
Fusion gene breakpoints across FOXN3 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across SLC25A21 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | LUAD | TCGA-44-7669-01A | FOXN3 | chr14 | 89656728 | - | SLC25A21 | chr14 | 37344209 | - |
ChimerDB4 | LUAD | TCGA-44-7669-01A | FOXN3 | chr14 | 89747294 | - | SLC25A21 | chr14 | 37344209 | - |
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Fusion Gene ORF analysis for FOXN3-SLC25A21 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-5UTR | ENST00000261302 | ENST00000557611 | FOXN3 | chr14 | 89656728 | - | SLC25A21 | chr14 | 37344209 | - |
5CDS-5UTR | ENST00000261302 | ENST00000557611 | FOXN3 | chr14 | 89747294 | - | SLC25A21 | chr14 | 37344209 | - |
5CDS-5UTR | ENST00000345097 | ENST00000557611 | FOXN3 | chr14 | 89656728 | - | SLC25A21 | chr14 | 37344209 | - |
5CDS-5UTR | ENST00000345097 | ENST00000557611 | FOXN3 | chr14 | 89747294 | - | SLC25A21 | chr14 | 37344209 | - |
5CDS-5UTR | ENST00000555353 | ENST00000557611 | FOXN3 | chr14 | 89747294 | - | SLC25A21 | chr14 | 37344209 | - |
5CDS-5UTR | ENST00000557258 | ENST00000557611 | FOXN3 | chr14 | 89747294 | - | SLC25A21 | chr14 | 37344209 | - |
5UTR-3CDS | ENST00000555658 | ENST00000331299 | FOXN3 | chr14 | 89747294 | - | SLC25A21 | chr14 | 37344209 | - |
5UTR-3CDS | ENST00000555658 | ENST00000555449 | FOXN3 | chr14 | 89747294 | - | SLC25A21 | chr14 | 37344209 | - |
5UTR-5UTR | ENST00000555658 | ENST00000557611 | FOXN3 | chr14 | 89747294 | - | SLC25A21 | chr14 | 37344209 | - |
Frame-shift | ENST00000345097 | ENST00000331299 | FOXN3 | chr14 | 89656728 | - | SLC25A21 | chr14 | 37344209 | - |
Frame-shift | ENST00000345097 | ENST00000331299 | FOXN3 | chr14 | 89747294 | - | SLC25A21 | chr14 | 37344209 | - |
Frame-shift | ENST00000345097 | ENST00000555449 | FOXN3 | chr14 | 89656728 | - | SLC25A21 | chr14 | 37344209 | - |
Frame-shift | ENST00000345097 | ENST00000555449 | FOXN3 | chr14 | 89747294 | - | SLC25A21 | chr14 | 37344209 | - |
Frame-shift | ENST00000555353 | ENST00000331299 | FOXN3 | chr14 | 89747294 | - | SLC25A21 | chr14 | 37344209 | - |
Frame-shift | ENST00000555353 | ENST00000555449 | FOXN3 | chr14 | 89747294 | - | SLC25A21 | chr14 | 37344209 | - |
In-frame | ENST00000261302 | ENST00000331299 | FOXN3 | chr14 | 89656728 | - | SLC25A21 | chr14 | 37344209 | - |
In-frame | ENST00000261302 | ENST00000331299 | FOXN3 | chr14 | 89747294 | - | SLC25A21 | chr14 | 37344209 | - |
In-frame | ENST00000261302 | ENST00000555449 | FOXN3 | chr14 | 89656728 | - | SLC25A21 | chr14 | 37344209 | - |
In-frame | ENST00000261302 | ENST00000555449 | FOXN3 | chr14 | 89747294 | - | SLC25A21 | chr14 | 37344209 | - |
In-frame | ENST00000557258 | ENST00000331299 | FOXN3 | chr14 | 89747294 | - | SLC25A21 | chr14 | 37344209 | - |
In-frame | ENST00000557258 | ENST00000555449 | FOXN3 | chr14 | 89747294 | - | SLC25A21 | chr14 | 37344209 | - |
intron-3CDS | ENST00000555353 | ENST00000331299 | FOXN3 | chr14 | 89656728 | - | SLC25A21 | chr14 | 37344209 | - |
intron-3CDS | ENST00000555353 | ENST00000555449 | FOXN3 | chr14 | 89656728 | - | SLC25A21 | chr14 | 37344209 | - |
intron-3CDS | ENST00000555658 | ENST00000331299 | FOXN3 | chr14 | 89656728 | - | SLC25A21 | chr14 | 37344209 | - |
intron-3CDS | ENST00000555658 | ENST00000555449 | FOXN3 | chr14 | 89656728 | - | SLC25A21 | chr14 | 37344209 | - |
intron-3CDS | ENST00000557258 | ENST00000331299 | FOXN3 | chr14 | 89656728 | - | SLC25A21 | chr14 | 37344209 | - |
intron-3CDS | ENST00000557258 | ENST00000555449 | FOXN3 | chr14 | 89656728 | - | SLC25A21 | chr14 | 37344209 | - |
intron-5UTR | ENST00000555353 | ENST00000557611 | FOXN3 | chr14 | 89656728 | - | SLC25A21 | chr14 | 37344209 | - |
intron-5UTR | ENST00000555658 | ENST00000557611 | FOXN3 | chr14 | 89656728 | - | SLC25A21 | chr14 | 37344209 | - |
intron-5UTR | ENST00000557258 | ENST00000557611 | FOXN3 | chr14 | 89656728 | - | SLC25A21 | chr14 | 37344209 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000261302 | FOXN3 | chr14 | 89656728 | - | ENST00000555449 | SLC25A21 | chr14 | 37344209 | - | 1707 | 827 | 16 | 1653 | 545 |
ENST00000261302 | FOXN3 | chr14 | 89656728 | - | ENST00000331299 | SLC25A21 | chr14 | 37344209 | - | 3026 | 827 | 16 | 1656 | 546 |
ENST00000261302 | FOXN3 | chr14 | 89747294 | - | ENST00000555449 | SLC25A21 | chr14 | 37344209 | - | 1641 | 761 | 16 | 1587 | 523 |
ENST00000261302 | FOXN3 | chr14 | 89747294 | - | ENST00000331299 | SLC25A21 | chr14 | 37344209 | - | 2960 | 761 | 16 | 1590 | 524 |
ENST00000557258 | FOXN3 | chr14 | 89747294 | - | ENST00000555449 | SLC25A21 | chr14 | 37344209 | - | 1881 | 1001 | 256 | 1827 | 523 |
ENST00000557258 | FOXN3 | chr14 | 89747294 | - | ENST00000331299 | SLC25A21 | chr14 | 37344209 | - | 3200 | 1001 | 256 | 1830 | 524 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000261302 | ENST00000555449 | FOXN3 | chr14 | 89656728 | - | SLC25A21 | chr14 | 37344209 | - | 0.001725954 | 0.9982741 |
ENST00000261302 | ENST00000331299 | FOXN3 | chr14 | 89656728 | - | SLC25A21 | chr14 | 37344209 | - | 0.000263862 | 0.99973613 |
ENST00000261302 | ENST00000555449 | FOXN3 | chr14 | 89747294 | - | SLC25A21 | chr14 | 37344209 | - | 0.001684346 | 0.9983157 |
ENST00000261302 | ENST00000331299 | FOXN3 | chr14 | 89747294 | - | SLC25A21 | chr14 | 37344209 | - | 0.000277624 | 0.9997223 |
ENST00000557258 | ENST00000555449 | FOXN3 | chr14 | 89747294 | - | SLC25A21 | chr14 | 37344209 | - | 0.002292225 | 0.9977077 |
ENST00000557258 | ENST00000331299 | FOXN3 | chr14 | 89747294 | - | SLC25A21 | chr14 | 37344209 | - | 0.000368337 | 0.99963164 |
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Fusion Genomic Features for FOXN3-SLC25A21 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
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Fusion Protein Features for FOXN3-SLC25A21 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr14:89656728/chr14:37344209) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | FOXN3 | chr14:89656728 | chr14:37344209 | ENST00000261302 | - | 4 | 6 | 113_204 | 270 | 491.0 | DNA binding | Fork-head |
Hgene | FOXN3 | chr14:89656728 | chr14:37344209 | ENST00000345097 | - | 5 | 7 | 113_204 | 270 | 491.0 | DNA binding | Fork-head |
Hgene | FOXN3 | chr14:89747294 | chr14:37344209 | ENST00000261302 | - | 3 | 6 | 113_204 | 248 | 491.0 | DNA binding | Fork-head |
Hgene | FOXN3 | chr14:89747294 | chr14:37344209 | ENST00000345097 | - | 4 | 7 | 113_204 | 248 | 491.0 | DNA binding | Fork-head |
Hgene | FOXN3 | chr14:89747294 | chr14:37344209 | ENST00000555353 | - | 4 | 6 | 113_204 | 248 | 469.0 | DNA binding | Fork-head |
Hgene | FOXN3 | chr14:89747294 | chr14:37344209 | ENST00000557258 | - | 4 | 6 | 113_204 | 248 | 469.0 | DNA binding | Fork-head |
Tgene | SLC25A21 | chr14:89656728 | chr14:37344209 | ENST00000331299 | 0 | 10 | 107_196 | 23 | 300.0 | Repeat | Note=Solcar 2 | |
Tgene | SLC25A21 | chr14:89656728 | chr14:37344209 | ENST00000331299 | 0 | 10 | 205_294 | 23 | 300.0 | Repeat | Note=Solcar 3 | |
Tgene | SLC25A21 | chr14:89656728 | chr14:37344209 | ENST00000555449 | 0 | 11 | 107_196 | 23 | 299.0 | Repeat | Note=Solcar 2 | |
Tgene | SLC25A21 | chr14:89656728 | chr14:37344209 | ENST00000555449 | 0 | 11 | 205_294 | 23 | 299.0 | Repeat | Note=Solcar 3 | |
Tgene | SLC25A21 | chr14:89747294 | chr14:37344209 | ENST00000331299 | 0 | 10 | 107_196 | 23 | 300.0 | Repeat | Note=Solcar 2 | |
Tgene | SLC25A21 | chr14:89747294 | chr14:37344209 | ENST00000331299 | 0 | 10 | 205_294 | 23 | 300.0 | Repeat | Note=Solcar 3 | |
Tgene | SLC25A21 | chr14:89747294 | chr14:37344209 | ENST00000555449 | 0 | 11 | 107_196 | 23 | 299.0 | Repeat | Note=Solcar 2 | |
Tgene | SLC25A21 | chr14:89747294 | chr14:37344209 | ENST00000555449 | 0 | 11 | 205_294 | 23 | 299.0 | Repeat | Note=Solcar 3 | |
Tgene | SLC25A21 | chr14:89656728 | chr14:37344209 | ENST00000331299 | 0 | 10 | 113_133 | 23 | 300.0 | Transmembrane | Helical%3B Name%3D3 | |
Tgene | SLC25A21 | chr14:89656728 | chr14:37344209 | ENST00000331299 | 0 | 10 | 167_187 | 23 | 300.0 | Transmembrane | Helical%3B Name%3D4 | |
Tgene | SLC25A21 | chr14:89656728 | chr14:37344209 | ENST00000331299 | 0 | 10 | 205_225 | 23 | 300.0 | Transmembrane | Helical%3B Name%3D5 | |
Tgene | SLC25A21 | chr14:89656728 | chr14:37344209 | ENST00000331299 | 0 | 10 | 277_297 | 23 | 300.0 | Transmembrane | Helical%3B Name%3D6 | |
Tgene | SLC25A21 | chr14:89656728 | chr14:37344209 | ENST00000331299 | 0 | 10 | 70_89 | 23 | 300.0 | Transmembrane | Helical%3B Name%3D2 | |
Tgene | SLC25A21 | chr14:89656728 | chr14:37344209 | ENST00000555449 | 0 | 11 | 113_133 | 23 | 299.0 | Transmembrane | Helical%3B Name%3D3 | |
Tgene | SLC25A21 | chr14:89656728 | chr14:37344209 | ENST00000555449 | 0 | 11 | 167_187 | 23 | 299.0 | Transmembrane | Helical%3B Name%3D4 | |
Tgene | SLC25A21 | chr14:89656728 | chr14:37344209 | ENST00000555449 | 0 | 11 | 205_225 | 23 | 299.0 | Transmembrane | Helical%3B Name%3D5 | |
Tgene | SLC25A21 | chr14:89656728 | chr14:37344209 | ENST00000555449 | 0 | 11 | 277_297 | 23 | 299.0 | Transmembrane | Helical%3B Name%3D6 | |
Tgene | SLC25A21 | chr14:89656728 | chr14:37344209 | ENST00000555449 | 0 | 11 | 70_89 | 23 | 299.0 | Transmembrane | Helical%3B Name%3D2 | |
Tgene | SLC25A21 | chr14:89747294 | chr14:37344209 | ENST00000331299 | 0 | 10 | 113_133 | 23 | 300.0 | Transmembrane | Helical%3B Name%3D3 | |
Tgene | SLC25A21 | chr14:89747294 | chr14:37344209 | ENST00000331299 | 0 | 10 | 167_187 | 23 | 300.0 | Transmembrane | Helical%3B Name%3D4 | |
Tgene | SLC25A21 | chr14:89747294 | chr14:37344209 | ENST00000331299 | 0 | 10 | 205_225 | 23 | 300.0 | Transmembrane | Helical%3B Name%3D5 | |
Tgene | SLC25A21 | chr14:89747294 | chr14:37344209 | ENST00000331299 | 0 | 10 | 277_297 | 23 | 300.0 | Transmembrane | Helical%3B Name%3D6 | |
Tgene | SLC25A21 | chr14:89747294 | chr14:37344209 | ENST00000331299 | 0 | 10 | 70_89 | 23 | 300.0 | Transmembrane | Helical%3B Name%3D2 | |
Tgene | SLC25A21 | chr14:89747294 | chr14:37344209 | ENST00000555449 | 0 | 11 | 113_133 | 23 | 299.0 | Transmembrane | Helical%3B Name%3D3 | |
Tgene | SLC25A21 | chr14:89747294 | chr14:37344209 | ENST00000555449 | 0 | 11 | 167_187 | 23 | 299.0 | Transmembrane | Helical%3B Name%3D4 | |
Tgene | SLC25A21 | chr14:89747294 | chr14:37344209 | ENST00000555449 | 0 | 11 | 205_225 | 23 | 299.0 | Transmembrane | Helical%3B Name%3D5 | |
Tgene | SLC25A21 | chr14:89747294 | chr14:37344209 | ENST00000555449 | 0 | 11 | 277_297 | 23 | 299.0 | Transmembrane | Helical%3B Name%3D6 | |
Tgene | SLC25A21 | chr14:89747294 | chr14:37344209 | ENST00000555449 | 0 | 11 | 70_89 | 23 | 299.0 | Transmembrane | Helical%3B Name%3D2 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | FOXN3 | chr14:89656728 | chr14:37344209 | ENST00000555353 | - | 1 | 6 | 113_204 | 0 | 469.0 | DNA binding | Fork-head |
Hgene | FOXN3 | chr14:89656728 | chr14:37344209 | ENST00000557258 | - | 1 | 6 | 113_204 | 0 | 469.0 | DNA binding | Fork-head |
Tgene | SLC25A21 | chr14:89656728 | chr14:37344209 | ENST00000331299 | 0 | 10 | 11_100 | 23 | 300.0 | Repeat | Note=Solcar 1 | |
Tgene | SLC25A21 | chr14:89656728 | chr14:37344209 | ENST00000555449 | 0 | 11 | 11_100 | 23 | 299.0 | Repeat | Note=Solcar 1 | |
Tgene | SLC25A21 | chr14:89747294 | chr14:37344209 | ENST00000331299 | 0 | 10 | 11_100 | 23 | 300.0 | Repeat | Note=Solcar 1 | |
Tgene | SLC25A21 | chr14:89747294 | chr14:37344209 | ENST00000555449 | 0 | 11 | 11_100 | 23 | 299.0 | Repeat | Note=Solcar 1 | |
Tgene | SLC25A21 | chr14:89656728 | chr14:37344209 | ENST00000331299 | 0 | 10 | 17_37 | 23 | 300.0 | Transmembrane | Helical%3B Name%3D1 | |
Tgene | SLC25A21 | chr14:89656728 | chr14:37344209 | ENST00000555449 | 0 | 11 | 17_37 | 23 | 299.0 | Transmembrane | Helical%3B Name%3D1 | |
Tgene | SLC25A21 | chr14:89747294 | chr14:37344209 | ENST00000331299 | 0 | 10 | 17_37 | 23 | 300.0 | Transmembrane | Helical%3B Name%3D1 | |
Tgene | SLC25A21 | chr14:89747294 | chr14:37344209 | ENST00000555449 | 0 | 11 | 17_37 | 23 | 299.0 | Transmembrane | Helical%3B Name%3D1 |
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Fusion Gene Sequence for FOXN3-SLC25A21 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>31152_31152_1_FOXN3-SLC25A21_FOXN3_chr14_89656728_ENST00000261302_SLC25A21_chr14_37344209_ENST00000331299_length(transcript)=3026nt_BP=827nt AGGAGCCTTCACGTAAATGGGTCCAGTCATGCCTCCCAGTAAGAAGCCAGAAAGCTCAGGAATTAGTGTCTCCAGTGGACTGAGTCAGTG TTACGGGGGCAGCGGTTTCTCCAAGGCCCTTCAGGAAGACGATGACCTCGACTTTTCTCTGCCTGACATCCGATTAGAAGAGGGGGCCAT GGAAGATGAAGAGCTGACCAACCTGAACTGGCTGCACGAGAGCAAGAACTTGCTGAAGAGCTTTGGGGAGTCGGTCCTCAGGAGTGTCAG CCCCGTCCAGGACCTGGACGATGACACCCCCCCATCCCCTGCCCACTCTGACATGCCCTACGATGCCAGGCAGAACCCCAACTGCAAACC CCCCTACTCCTTCAGCTGCCTCATATTTATGGCCATCGAGGACTCTCCAACCAAGCGCCTGCCAGTGAAGGATATCTACAACTGGATCTT GGAACATTTTCCGTATTTTGCAAATGCACCTACTGGGTGGAAAAACTCAGTGAGACACAATTTATCATTGAATAAGTGTTTTAAGAAAGT GGACAAAGAGAGGAGTCAGAGTATTGGGAAAGGGTCGTTGTGGTGCATAGACCCAGAGTATAGACAAAATCTAATTCAGGCTTTGAAAAA GACACCTTATCACCCACACCCACACGTGTTCAATACACCTCCCACCTGTCCTCAGGCATATCAAAGCACATCAGGTCCACCCATCTGGCC GGGCAGTACCTTCTTCAAGAGAAATGGAGCCCTTCTCCAAGATCCTGACATTGATGCTGCCAGTGCCATGATGCTTTTGAATACTCCCCC TGAGATACAAGCAGGTTGTCTTGTAGAAATTTGCCTGATGCACCCCCTAGATGTGGTGAAAACCAGGTTTCAGATTCAGAGATGTGCAAC CGATCCAAACAGTTATAAAAGCTTGGTAGACAGCTTTCGAATGATTTTCCAAATGGAAGGGTTATTTGGTTTTTACAAGGGAATTCTGCC ACCTATCTTGGCTGAAACCCCAAAAAGAGCAGTGAAGTTTTTCACCTTTGAGCAGTACAAGAAATTGCTGGGATATGTGTCACTGTCACC AGCATTGACATTCGCCATTGCTGGATTGGGATCTGGACTAACAGAAGCCATTGTAGTTAACCCTTTTGAGGTAGTAAAAGTTGGCTTGCA AGCAAATCGGAACACATTTGCAGAGCAACCATCCACTGTGGGTTATGCAAGACAAATCATTAAGAAGGAAGGCTGGGGACTCCAGGGCCT CAACAAAGGATTAACTGCAACTTTGGGACGACATGGAGTTTTCAACATGGTTTATTTTGGCTTCTACTACAATGTCAAAAACATGATTCC TGTCAATAAGGATCCAATCTTGGAGTTTTGGAGAAAATTTGGGATTGGTCTTCTCTCGGGGACAATAGCCTCAGTCATTAACATCCCTTT TGATGTTGCCAAAAGTAGGATTCAAGGGCCTCAACCAGTTCCTGGAGAGATCAAGTACAGAACCTGTTTTAAAACAATGGCAACAGTCTA TCAGGAAGAAGGGATTTTAGCTTTGTACAAAGGCCTGCTTCCCAAGATTATGAGACTTGGACCAGGTGGTGCAGTGATGCTGCTGGTTTA TGAATACACCTATTCATGGCTTCAAGAGAACTGGTGATTGCCTATGAAGTGTTTTTCCCCCTTGAGATAATGGATATTTGCTATGCAGCA CCATGAAGAAGAGAGACTATCGATCGGCCAGGTGTATAATTATGAAGGAGAAAACTGTTCAAGAACAAAATCTATTTTAATACTTTAAAA AATGTCTATAGGCAACTTGAGATTATAGTTTTGGCTGTATAAATAAAACTGTGAGAAGAAAAAAATAATATGAAACAATGAGGTATTTAA AGTGAATATAGAAAAATAGCATAGAAATCATATATTTATTTCATAAAATAAATAGAAACTTTGTCTCCTGTGTTCCTCTTCAATGCTTCA CAATGAAAATTCATTGTATTGATCAGCATTTTTCCTAAGAGGTCTAGAAATGCTTAAACTATTGAAAATAAATCAAATTATTCAAAGACT GGATTAAAAAAAAGTTAAGCCAAAATTTAAGCAGTTTTTATAATGAATTAAATTATTCCATAAATAATATTTAAAGAGCACAAGAAAAAT TTTTTAAAGTGCACTAAAATGACCTTTTAAGAATGTTTAATTTTATGAATACTATGTTAAAATGTAAATCTGTTGGTTTTTTTTAGTAAC TATGCACATATCAGCTCTATTTTCCTACATCTACTTTATATCTCATATTGCTGTAAGATAATAAATAGGTATTTTAAAACATTGTTTAAA ACAGAATGTTAAAACACTGTTGTTTAAGCATGTTTAAATCAAGGTATTCCAAATCTCTTCTAACACAAGTAGGAAACATGAAATAAAATT TACTTTCCTCCACATAGTTCTCTTTGAAGATAAGTTTTGTTGATGAGATATTGTCATGTTAAATCACAAATTGGAAACACCTTTGGACCC ATTTGTCAGCCATCAGTATTTGCATCCAAATACCTTTATTCAGCATGCCTACCTGTGCCATTTTTAGGAAGAATGTATAGAACAGAACTG CATTTTCAGGTTATTAGTTTTAAACGACAACTTCAGGTGGGAAGTCAGCTGTCTGCAGTATTAAAATATGTATGATGAAGGGGAAATGTT CTGAAAAAGAAATACACTTAGCATTTCTAAGGATTACTATACTAACATGTATCAACAAAAATATCTCCTTGGTCTTGATGTAACCAAACT TGATTTTATATCTGCATCCAGAGATGATGCTGATTCAGTAAAGTCAACAAGAATAACTGAAAGTCCATATGACACCTGTCCTAAGTTACT ACCGTGGGCTATTTCTACTACGGGGCTATTTCACTAAAGCATTTTGAAAATAAAAAGTAAAAGATAACATGGTAATTATTACTTTTTATT >31152_31152_1_FOXN3-SLC25A21_FOXN3_chr14_89656728_ENST00000261302_SLC25A21_chr14_37344209_ENST00000331299_length(amino acids)=546AA_BP=271 MGPVMPPSKKPESSGISVSSGLSQCYGGSGFSKALQEDDDLDFSLPDIRLEEGAMEDEELTNLNWLHESKNLLKSFGESVLRSVSPVQDL DDDTPPSPAHSDMPYDARQNPNCKPPYSFSCLIFMAIEDSPTKRLPVKDIYNWILEHFPYFANAPTGWKNSVRHNLSLNKCFKKVDKERS QSIGKGSLWCIDPEYRQNLIQALKKTPYHPHPHVFNTPPTCPQAYQSTSGPPIWPGSTFFKRNGALLQDPDIDAASAMMLLNTPPEIQAG CLVEICLMHPLDVVKTRFQIQRCATDPNSYKSLVDSFRMIFQMEGLFGFYKGILPPILAETPKRAVKFFTFEQYKKLLGYVSLSPALTFA IAGLGSGLTEAIVVNPFEVVKVGLQANRNTFAEQPSTVGYARQIIKKEGWGLQGLNKGLTATLGRHGVFNMVYFGFYYNVKNMIPVNKDP ILEFWRKFGIGLLSGTIASVINIPFDVAKSRIQGPQPVPGEIKYRTCFKTMATVYQEEGILALYKGLLPKIMRLGPGGAVMLLVYEYTYS -------------------------------------------------------------- >31152_31152_2_FOXN3-SLC25A21_FOXN3_chr14_89656728_ENST00000261302_SLC25A21_chr14_37344209_ENST00000555449_length(transcript)=1707nt_BP=827nt AGGAGCCTTCACGTAAATGGGTCCAGTCATGCCTCCCAGTAAGAAGCCAGAAAGCTCAGGAATTAGTGTCTCCAGTGGACTGAGTCAGTG TTACGGGGGCAGCGGTTTCTCCAAGGCCCTTCAGGAAGACGATGACCTCGACTTTTCTCTGCCTGACATCCGATTAGAAGAGGGGGCCAT GGAAGATGAAGAGCTGACCAACCTGAACTGGCTGCACGAGAGCAAGAACTTGCTGAAGAGCTTTGGGGAGTCGGTCCTCAGGAGTGTCAG CCCCGTCCAGGACCTGGACGATGACACCCCCCCATCCCCTGCCCACTCTGACATGCCCTACGATGCCAGGCAGAACCCCAACTGCAAACC CCCCTACTCCTTCAGCTGCCTCATATTTATGGCCATCGAGGACTCTCCAACCAAGCGCCTGCCAGTGAAGGATATCTACAACTGGATCTT GGAACATTTTCCGTATTTTGCAAATGCACCTACTGGGTGGAAAAACTCAGTGAGACACAATTTATCATTGAATAAGTGTTTTAAGAAAGT GGACAAAGAGAGGAGTCAGAGTATTGGGAAAGGGTCGTTGTGGTGCATAGACCCAGAGTATAGACAAAATCTAATTCAGGCTTTGAAAAA GACACCTTATCACCCACACCCACACGTGTTCAATACACCTCCCACCTGTCCTCAGGCATATCAAAGCACATCAGGTCCACCCATCTGGCC GGGCAGTACCTTCTTCAAGAGAAATGGAGCCCTTCTCCAAGATCCTGACATTGATGCTGCCAGTGCCATGATGCTTTTGAATACTCCCCC TGAGATACAAGCAGGTTGTCTTGTAGAAATTTGCCTGATGCACCCCCTAGATGTGGTGAAAACCAGGTTTCAGATTCAGAGATGTGCAAC CGATCCAAACAGTTATAAAAGCTTGGTAGACAGCTTTCGAATGATTTTCCAAATGGAAGGGTTATTTGGTTTTTACAAGGGAATTCTGCC ACCTATCTTGGCTGAAACCCCAAAAAGAGCAGTGAAGTTTTTCACCTTTGAGCAGTACAAGAAATTGCTGGGATATGTGTCACTGTCACC AGCATTGACATTCGCCATTGCTGGATTGGGATCTGGACTAACAGAAGCCATTGTAGTTAACCCTTTTGAGGTAGTAAAAGTTGGCTTGCA AGCAAATCGGAACACATTTGCAGAGCAACCATCCACTGTGGGTTATGCAAGACAAATCATTAAGAAGGAAGGCTGGGGACTCCAGGGCCT CAACAAAGGATTAACTGCAACTTTGGGACGACATGGAGTTTTCAACATGGTTTATTTTGGCTTCTACTACAATGTCAAAAACATGATTCC TGTCAATAAGGATCCAATCTTGGAGTTTTGGAGAAAATTTGGGATTGGTCTTCTCTCGGGGACAATAGCCTCAGTCATTAACATCCCTTT TGATGTTGCCAAAAGTAGGATTCAAGGGCCTCAACCAGTTCCTGGAGAGATCAAGTACAGAACCTGTTTTAAAACAATGGCAACAGTCTA TCAGGAAGAAGGGATTTTAGCTTTGTACAAAGGCCTGCTTCCCAAGATTATGAGACTTGGACCAGGTGGTGCAGTGATGCTGCTGGTTTA >31152_31152_2_FOXN3-SLC25A21_FOXN3_chr14_89656728_ENST00000261302_SLC25A21_chr14_37344209_ENST00000555449_length(amino acids)=545AA_BP=271 MGPVMPPSKKPESSGISVSSGLSQCYGGSGFSKALQEDDDLDFSLPDIRLEEGAMEDEELTNLNWLHESKNLLKSFGESVLRSVSPVQDL DDDTPPSPAHSDMPYDARQNPNCKPPYSFSCLIFMAIEDSPTKRLPVKDIYNWILEHFPYFANAPTGWKNSVRHNLSLNKCFKKVDKERS QSIGKGSLWCIDPEYRQNLIQALKKTPYHPHPHVFNTPPTCPQAYQSTSGPPIWPGSTFFKRNGALLQDPDIDAASAMMLLNTPPEIQAG CLVEICLMHPLDVVKTRFQIQRCATDPNSYKSLVDSFRMIFQMEGLFGFYKGILPPILAETPKRAVKFFTFEQYKKLLGYVSLSPALTFA IAGLGSGLTEAIVVNPFEVVKVGLQANRNTFAEQPSTVGYARQIIKKEGWGLQGLNKGLTATLGRHGVFNMVYFGFYYNVKNMIPVNKDP ILEFWRKFGIGLLSGTIASVINIPFDVAKSRIQGPQPVPGEIKYRTCFKTMATVYQEEGILALYKGLLPKIMRLGPGGAVMLLVYEYTYS -------------------------------------------------------------- >31152_31152_3_FOXN3-SLC25A21_FOXN3_chr14_89747294_ENST00000261302_SLC25A21_chr14_37344209_ENST00000331299_length(transcript)=2960nt_BP=761nt AGGAGCCTTCACGTAAATGGGTCCAGTCATGCCTCCCAGTAAGAAGCCAGAAAGCTCAGGAATTAGTGTCTCCAGTGGACTGAGTCAGTG TTACGGGGGCAGCGGTTTCTCCAAGGCCCTTCAGGAAGACGATGACCTCGACTTTTCTCTGCCTGACATCCGATTAGAAGAGGGGGCCAT GGAAGATGAAGAGCTGACCAACCTGAACTGGCTGCACGAGAGCAAGAACTTGCTGAAGAGCTTTGGGGAGTCGGTCCTCAGGAGTGTCAG CCCCGTCCAGGACCTGGACGATGACACCCCCCCATCCCCTGCCCACTCTGACATGCCCTACGATGCCAGGCAGAACCCCAACTGCAAACC CCCCTACTCCTTCAGCTGCCTCATATTTATGGCCATCGAGGACTCTCCAACCAAGCGCCTGCCAGTGAAGGATATCTACAACTGGATCTT GGAACATTTTCCGTATTTTGCAAATGCACCTACTGGGTGGAAAAACTCAGTGAGACACAATTTATCATTGAATAAGTGTTTTAAGAAAGT GGACAAAGAGAGGAGTCAGAGTATTGGGAAAGGGTCGTTGTGGTGCATAGACCCAGAGTATAGACAAAATCTAATTCAGGCTTTGAAAAA GACACCTTATCACCCACACCCACACGTGTTCAATACACCTCCCACCTGTCCTCAGGCATATCAAAGCACATCAGGTCCACCCATCTGGCC GGGCAGTACCTTCTTCAAGAGAAATGGAGCCCTTCTCCAAGGTCTTGTAGAAATTTGCCTGATGCACCCCCTAGATGTGGTGAAAACCAG GTTTCAGATTCAGAGATGTGCAACCGATCCAAACAGTTATAAAAGCTTGGTAGACAGCTTTCGAATGATTTTCCAAATGGAAGGGTTATT TGGTTTTTACAAGGGAATTCTGCCACCTATCTTGGCTGAAACCCCAAAAAGAGCAGTGAAGTTTTTCACCTTTGAGCAGTACAAGAAATT GCTGGGATATGTGTCACTGTCACCAGCATTGACATTCGCCATTGCTGGATTGGGATCTGGACTAACAGAAGCCATTGTAGTTAACCCTTT TGAGGTAGTAAAAGTTGGCTTGCAAGCAAATCGGAACACATTTGCAGAGCAACCATCCACTGTGGGTTATGCAAGACAAATCATTAAGAA GGAAGGCTGGGGACTCCAGGGCCTCAACAAAGGATTAACTGCAACTTTGGGACGACATGGAGTTTTCAACATGGTTTATTTTGGCTTCTA CTACAATGTCAAAAACATGATTCCTGTCAATAAGGATCCAATCTTGGAGTTTTGGAGAAAATTTGGGATTGGTCTTCTCTCGGGGACAAT AGCCTCAGTCATTAACATCCCTTTTGATGTTGCCAAAAGTAGGATTCAAGGGCCTCAACCAGTTCCTGGAGAGATCAAGTACAGAACCTG TTTTAAAACAATGGCAACAGTCTATCAGGAAGAAGGGATTTTAGCTTTGTACAAAGGCCTGCTTCCCAAGATTATGAGACTTGGACCAGG TGGTGCAGTGATGCTGCTGGTTTATGAATACACCTATTCATGGCTTCAAGAGAACTGGTGATTGCCTATGAAGTGTTTTTCCCCCTTGAG ATAATGGATATTTGCTATGCAGCACCATGAAGAAGAGAGACTATCGATCGGCCAGGTGTATAATTATGAAGGAGAAAACTGTTCAAGAAC AAAATCTATTTTAATACTTTAAAAAATGTCTATAGGCAACTTGAGATTATAGTTTTGGCTGTATAAATAAAACTGTGAGAAGAAAAAAAT AATATGAAACAATGAGGTATTTAAAGTGAATATAGAAAAATAGCATAGAAATCATATATTTATTTCATAAAATAAATAGAAACTTTGTCT CCTGTGTTCCTCTTCAATGCTTCACAATGAAAATTCATTGTATTGATCAGCATTTTTCCTAAGAGGTCTAGAAATGCTTAAACTATTGAA AATAAATCAAATTATTCAAAGACTGGATTAAAAAAAAGTTAAGCCAAAATTTAAGCAGTTTTTATAATGAATTAAATTATTCCATAAATA ATATTTAAAGAGCACAAGAAAAATTTTTTAAAGTGCACTAAAATGACCTTTTAAGAATGTTTAATTTTATGAATACTATGTTAAAATGTA AATCTGTTGGTTTTTTTTAGTAACTATGCACATATCAGCTCTATTTTCCTACATCTACTTTATATCTCATATTGCTGTAAGATAATAAAT AGGTATTTTAAAACATTGTTTAAAACAGAATGTTAAAACACTGTTGTTTAAGCATGTTTAAATCAAGGTATTCCAAATCTCTTCTAACAC AAGTAGGAAACATGAAATAAAATTTACTTTCCTCCACATAGTTCTCTTTGAAGATAAGTTTTGTTGATGAGATATTGTCATGTTAAATCA CAAATTGGAAACACCTTTGGACCCATTTGTCAGCCATCAGTATTTGCATCCAAATACCTTTATTCAGCATGCCTACCTGTGCCATTTTTA GGAAGAATGTATAGAACAGAACTGCATTTTCAGGTTATTAGTTTTAAACGACAACTTCAGGTGGGAAGTCAGCTGTCTGCAGTATTAAAA TATGTATGATGAAGGGGAAATGTTCTGAAAAAGAAATACACTTAGCATTTCTAAGGATTACTATACTAACATGTATCAACAAAAATATCT CCTTGGTCTTGATGTAACCAAACTTGATTTTATATCTGCATCCAGAGATGATGCTGATTCAGTAAAGTCAACAAGAATAACTGAAAGTCC ATATGACACCTGTCCTAAGTTACTACCGTGGGCTATTTCTACTACGGGGCTATTTCACTAAAGCATTTTGAAAATAAAAAGTAAAAGATA >31152_31152_3_FOXN3-SLC25A21_FOXN3_chr14_89747294_ENST00000261302_SLC25A21_chr14_37344209_ENST00000331299_length(amino acids)=524AA_BP=246 MGPVMPPSKKPESSGISVSSGLSQCYGGSGFSKALQEDDDLDFSLPDIRLEEGAMEDEELTNLNWLHESKNLLKSFGESVLRSVSPVQDL DDDTPPSPAHSDMPYDARQNPNCKPPYSFSCLIFMAIEDSPTKRLPVKDIYNWILEHFPYFANAPTGWKNSVRHNLSLNKCFKKVDKERS QSIGKGSLWCIDPEYRQNLIQALKKTPYHPHPHVFNTPPTCPQAYQSTSGPPIWPGSTFFKRNGALLQGLVEICLMHPLDVVKTRFQIQR CATDPNSYKSLVDSFRMIFQMEGLFGFYKGILPPILAETPKRAVKFFTFEQYKKLLGYVSLSPALTFAIAGLGSGLTEAIVVNPFEVVKV GLQANRNTFAEQPSTVGYARQIIKKEGWGLQGLNKGLTATLGRHGVFNMVYFGFYYNVKNMIPVNKDPILEFWRKFGIGLLSGTIASVIN -------------------------------------------------------------- >31152_31152_4_FOXN3-SLC25A21_FOXN3_chr14_89747294_ENST00000261302_SLC25A21_chr14_37344209_ENST00000555449_length(transcript)=1641nt_BP=761nt AGGAGCCTTCACGTAAATGGGTCCAGTCATGCCTCCCAGTAAGAAGCCAGAAAGCTCAGGAATTAGTGTCTCCAGTGGACTGAGTCAGTG TTACGGGGGCAGCGGTTTCTCCAAGGCCCTTCAGGAAGACGATGACCTCGACTTTTCTCTGCCTGACATCCGATTAGAAGAGGGGGCCAT GGAAGATGAAGAGCTGACCAACCTGAACTGGCTGCACGAGAGCAAGAACTTGCTGAAGAGCTTTGGGGAGTCGGTCCTCAGGAGTGTCAG CCCCGTCCAGGACCTGGACGATGACACCCCCCCATCCCCTGCCCACTCTGACATGCCCTACGATGCCAGGCAGAACCCCAACTGCAAACC CCCCTACTCCTTCAGCTGCCTCATATTTATGGCCATCGAGGACTCTCCAACCAAGCGCCTGCCAGTGAAGGATATCTACAACTGGATCTT GGAACATTTTCCGTATTTTGCAAATGCACCTACTGGGTGGAAAAACTCAGTGAGACACAATTTATCATTGAATAAGTGTTTTAAGAAAGT GGACAAAGAGAGGAGTCAGAGTATTGGGAAAGGGTCGTTGTGGTGCATAGACCCAGAGTATAGACAAAATCTAATTCAGGCTTTGAAAAA GACACCTTATCACCCACACCCACACGTGTTCAATACACCTCCCACCTGTCCTCAGGCATATCAAAGCACATCAGGTCCACCCATCTGGCC GGGCAGTACCTTCTTCAAGAGAAATGGAGCCCTTCTCCAAGGTCTTGTAGAAATTTGCCTGATGCACCCCCTAGATGTGGTGAAAACCAG GTTTCAGATTCAGAGATGTGCAACCGATCCAAACAGTTATAAAAGCTTGGTAGACAGCTTTCGAATGATTTTCCAAATGGAAGGGTTATT TGGTTTTTACAAGGGAATTCTGCCACCTATCTTGGCTGAAACCCCAAAAAGAGCAGTGAAGTTTTTCACCTTTGAGCAGTACAAGAAATT GCTGGGATATGTGTCACTGTCACCAGCATTGACATTCGCCATTGCTGGATTGGGATCTGGACTAACAGAAGCCATTGTAGTTAACCCTTT TGAGGTAGTAAAAGTTGGCTTGCAAGCAAATCGGAACACATTTGCAGAGCAACCATCCACTGTGGGTTATGCAAGACAAATCATTAAGAA GGAAGGCTGGGGACTCCAGGGCCTCAACAAAGGATTAACTGCAACTTTGGGACGACATGGAGTTTTCAACATGGTTTATTTTGGCTTCTA CTACAATGTCAAAAACATGATTCCTGTCAATAAGGATCCAATCTTGGAGTTTTGGAGAAAATTTGGGATTGGTCTTCTCTCGGGGACAAT AGCCTCAGTCATTAACATCCCTTTTGATGTTGCCAAAAGTAGGATTCAAGGGCCTCAACCAGTTCCTGGAGAGATCAAGTACAGAACCTG TTTTAAAACAATGGCAACAGTCTATCAGGAAGAAGGGATTTTAGCTTTGTACAAAGGCCTGCTTCCCAAGATTATGAGACTTGGACCAGG TGGTGCAGTGATGCTGCTGGTTTATGAATACACCTATTCATGGCTTCAAGAGAACTGACTGGGAACTCCAGATGTCAATGGAAGTTTTAC >31152_31152_4_FOXN3-SLC25A21_FOXN3_chr14_89747294_ENST00000261302_SLC25A21_chr14_37344209_ENST00000555449_length(amino acids)=523AA_BP=246 MGPVMPPSKKPESSGISVSSGLSQCYGGSGFSKALQEDDDLDFSLPDIRLEEGAMEDEELTNLNWLHESKNLLKSFGESVLRSVSPVQDL DDDTPPSPAHSDMPYDARQNPNCKPPYSFSCLIFMAIEDSPTKRLPVKDIYNWILEHFPYFANAPTGWKNSVRHNLSLNKCFKKVDKERS QSIGKGSLWCIDPEYRQNLIQALKKTPYHPHPHVFNTPPTCPQAYQSTSGPPIWPGSTFFKRNGALLQGLVEICLMHPLDVVKTRFQIQR CATDPNSYKSLVDSFRMIFQMEGLFGFYKGILPPILAETPKRAVKFFTFEQYKKLLGYVSLSPALTFAIAGLGSGLTEAIVVNPFEVVKV GLQANRNTFAEQPSTVGYARQIIKKEGWGLQGLNKGLTATLGRHGVFNMVYFGFYYNVKNMIPVNKDPILEFWRKFGIGLLSGTIASVIN -------------------------------------------------------------- >31152_31152_5_FOXN3-SLC25A21_FOXN3_chr14_89747294_ENST00000557258_SLC25A21_chr14_37344209_ENST00000331299_length(transcript)=3200nt_BP=1001nt GCGGGAGGACGCGCGGCGCGCCCGGCGGACGCCGCAGGTCCCATGCCGCGCCGCGACCCCCGCGCCCCTGCCGCCCGCGCCCGCGGCCGC CCCCCGCCGCCCGCCGCCCCGGGCTCGCCGCGCCGCGCCCGCGCGTCCTTAGCGGGGCCACCGAGCGATGCCCGCCGGGCGCCCGCGAAA GTTTGTCGGCTCCTGCTGAAGGGCAGCGGCGCCCCCGCACCCCCGTGCCCCGCTCCGGCCAGGAGCCTTCACGTAAATGGGTCCAGTCAT GCCTCCCAGTAAGAAGCCAGAAAGCTCAGGAATTAGTGTCTCCAGTGGACTGAGTCAGTGTTACGGGGGCAGCGGTTTCTCCAAGGCCCT TCAGGAAGACGATGACCTCGACTTTTCTCTGCCTGACATCCGATTAGAAGAGGGGGCCATGGAAGATGAAGAGCTGACCAACCTGAACTG GCTGCACGAGAGCAAGAACTTGCTGAAGAGCTTTGGGGAGTCGGTCCTCAGGAGTGTCAGCCCCGTCCAGGACCTGGACGATGACACCCC CCCATCCCCTGCCCACTCTGACATGCCCTACGATGCCAGGCAGAACCCCAACTGCAAACCCCCCTACTCCTTCAGCTGCCTCATATTTAT GGCCATCGAGGACTCTCCAACCAAGCGCCTGCCAGTGAAGGATATCTACAACTGGATCTTGGAACATTTTCCGTATTTTGCAAATGCACC TACTGGGTGGAAAAACTCAGTGAGACACAATTTATCATTGAATAAGTGTTTTAAGAAAGTGGACAAAGAGAGGAGTCAGAGTATTGGGAA AGGGTCGTTGTGGTGCATAGACCCAGAGTATAGACAAAATCTAATTCAGGCTTTGAAAAAGACACCTTATCACCCACACCCACACGTGTT CAATACACCTCCCACCTGTCCTCAGGCATATCAAAGCACATCAGGTCCACCCATCTGGCCGGGCAGTACCTTCTTCAAGAGAAATGGAGC CCTTCTCCAAGGTCTTGTAGAAATTTGCCTGATGCACCCCCTAGATGTGGTGAAAACCAGGTTTCAGATTCAGAGATGTGCAACCGATCC AAACAGTTATAAAAGCTTGGTAGACAGCTTTCGAATGATTTTCCAAATGGAAGGGTTATTTGGTTTTTACAAGGGAATTCTGCCACCTAT CTTGGCTGAAACCCCAAAAAGAGCAGTGAAGTTTTTCACCTTTGAGCAGTACAAGAAATTGCTGGGATATGTGTCACTGTCACCAGCATT GACATTCGCCATTGCTGGATTGGGATCTGGACTAACAGAAGCCATTGTAGTTAACCCTTTTGAGGTAGTAAAAGTTGGCTTGCAAGCAAA TCGGAACACATTTGCAGAGCAACCATCCACTGTGGGTTATGCAAGACAAATCATTAAGAAGGAAGGCTGGGGACTCCAGGGCCTCAACAA AGGATTAACTGCAACTTTGGGACGACATGGAGTTTTCAACATGGTTTATTTTGGCTTCTACTACAATGTCAAAAACATGATTCCTGTCAA TAAGGATCCAATCTTGGAGTTTTGGAGAAAATTTGGGATTGGTCTTCTCTCGGGGACAATAGCCTCAGTCATTAACATCCCTTTTGATGT TGCCAAAAGTAGGATTCAAGGGCCTCAACCAGTTCCTGGAGAGATCAAGTACAGAACCTGTTTTAAAACAATGGCAACAGTCTATCAGGA AGAAGGGATTTTAGCTTTGTACAAAGGCCTGCTTCCCAAGATTATGAGACTTGGACCAGGTGGTGCAGTGATGCTGCTGGTTTATGAATA CACCTATTCATGGCTTCAAGAGAACTGGTGATTGCCTATGAAGTGTTTTTCCCCCTTGAGATAATGGATATTTGCTATGCAGCACCATGA AGAAGAGAGACTATCGATCGGCCAGGTGTATAATTATGAAGGAGAAAACTGTTCAAGAACAAAATCTATTTTAATACTTTAAAAAATGTC TATAGGCAACTTGAGATTATAGTTTTGGCTGTATAAATAAAACTGTGAGAAGAAAAAAATAATATGAAACAATGAGGTATTTAAAGTGAA TATAGAAAAATAGCATAGAAATCATATATTTATTTCATAAAATAAATAGAAACTTTGTCTCCTGTGTTCCTCTTCAATGCTTCACAATGA AAATTCATTGTATTGATCAGCATTTTTCCTAAGAGGTCTAGAAATGCTTAAACTATTGAAAATAAATCAAATTATTCAAAGACTGGATTA AAAAAAAGTTAAGCCAAAATTTAAGCAGTTTTTATAATGAATTAAATTATTCCATAAATAATATTTAAAGAGCACAAGAAAAATTTTTTA AAGTGCACTAAAATGACCTTTTAAGAATGTTTAATTTTATGAATACTATGTTAAAATGTAAATCTGTTGGTTTTTTTTAGTAACTATGCA CATATCAGCTCTATTTTCCTACATCTACTTTATATCTCATATTGCTGTAAGATAATAAATAGGTATTTTAAAACATTGTTTAAAACAGAA TGTTAAAACACTGTTGTTTAAGCATGTTTAAATCAAGGTATTCCAAATCTCTTCTAACACAAGTAGGAAACATGAAATAAAATTTACTTT CCTCCACATAGTTCTCTTTGAAGATAAGTTTTGTTGATGAGATATTGTCATGTTAAATCACAAATTGGAAACACCTTTGGACCCATTTGT CAGCCATCAGTATTTGCATCCAAATACCTTTATTCAGCATGCCTACCTGTGCCATTTTTAGGAAGAATGTATAGAACAGAACTGCATTTT CAGGTTATTAGTTTTAAACGACAACTTCAGGTGGGAAGTCAGCTGTCTGCAGTATTAAAATATGTATGATGAAGGGGAAATGTTCTGAAA AAGAAATACACTTAGCATTTCTAAGGATTACTATACTAACATGTATCAACAAAAATATCTCCTTGGTCTTGATGTAACCAAACTTGATTT TATATCTGCATCCAGAGATGATGCTGATTCAGTAAAGTCAACAAGAATAACTGAAAGTCCATATGACACCTGTCCTAAGTTACTACCGTG GGCTATTTCTACTACGGGGCTATTTCACTAAAGCATTTTGAAAATAAAAAGTAAAAGATAACATGGTAATTATTACTTTTTATTAATTTA >31152_31152_5_FOXN3-SLC25A21_FOXN3_chr14_89747294_ENST00000557258_SLC25A21_chr14_37344209_ENST00000331299_length(amino acids)=524AA_BP=246 MGPVMPPSKKPESSGISVSSGLSQCYGGSGFSKALQEDDDLDFSLPDIRLEEGAMEDEELTNLNWLHESKNLLKSFGESVLRSVSPVQDL DDDTPPSPAHSDMPYDARQNPNCKPPYSFSCLIFMAIEDSPTKRLPVKDIYNWILEHFPYFANAPTGWKNSVRHNLSLNKCFKKVDKERS QSIGKGSLWCIDPEYRQNLIQALKKTPYHPHPHVFNTPPTCPQAYQSTSGPPIWPGSTFFKRNGALLQGLVEICLMHPLDVVKTRFQIQR CATDPNSYKSLVDSFRMIFQMEGLFGFYKGILPPILAETPKRAVKFFTFEQYKKLLGYVSLSPALTFAIAGLGSGLTEAIVVNPFEVVKV GLQANRNTFAEQPSTVGYARQIIKKEGWGLQGLNKGLTATLGRHGVFNMVYFGFYYNVKNMIPVNKDPILEFWRKFGIGLLSGTIASVIN -------------------------------------------------------------- >31152_31152_6_FOXN3-SLC25A21_FOXN3_chr14_89747294_ENST00000557258_SLC25A21_chr14_37344209_ENST00000555449_length(transcript)=1881nt_BP=1001nt GCGGGAGGACGCGCGGCGCGCCCGGCGGACGCCGCAGGTCCCATGCCGCGCCGCGACCCCCGCGCCCCTGCCGCCCGCGCCCGCGGCCGC CCCCCGCCGCCCGCCGCCCCGGGCTCGCCGCGCCGCGCCCGCGCGTCCTTAGCGGGGCCACCGAGCGATGCCCGCCGGGCGCCCGCGAAA GTTTGTCGGCTCCTGCTGAAGGGCAGCGGCGCCCCCGCACCCCCGTGCCCCGCTCCGGCCAGGAGCCTTCACGTAAATGGGTCCAGTCAT GCCTCCCAGTAAGAAGCCAGAAAGCTCAGGAATTAGTGTCTCCAGTGGACTGAGTCAGTGTTACGGGGGCAGCGGTTTCTCCAAGGCCCT TCAGGAAGACGATGACCTCGACTTTTCTCTGCCTGACATCCGATTAGAAGAGGGGGCCATGGAAGATGAAGAGCTGACCAACCTGAACTG GCTGCACGAGAGCAAGAACTTGCTGAAGAGCTTTGGGGAGTCGGTCCTCAGGAGTGTCAGCCCCGTCCAGGACCTGGACGATGACACCCC CCCATCCCCTGCCCACTCTGACATGCCCTACGATGCCAGGCAGAACCCCAACTGCAAACCCCCCTACTCCTTCAGCTGCCTCATATTTAT GGCCATCGAGGACTCTCCAACCAAGCGCCTGCCAGTGAAGGATATCTACAACTGGATCTTGGAACATTTTCCGTATTTTGCAAATGCACC TACTGGGTGGAAAAACTCAGTGAGACACAATTTATCATTGAATAAGTGTTTTAAGAAAGTGGACAAAGAGAGGAGTCAGAGTATTGGGAA AGGGTCGTTGTGGTGCATAGACCCAGAGTATAGACAAAATCTAATTCAGGCTTTGAAAAAGACACCTTATCACCCACACCCACACGTGTT CAATACACCTCCCACCTGTCCTCAGGCATATCAAAGCACATCAGGTCCACCCATCTGGCCGGGCAGTACCTTCTTCAAGAGAAATGGAGC CCTTCTCCAAGGTCTTGTAGAAATTTGCCTGATGCACCCCCTAGATGTGGTGAAAACCAGGTTTCAGATTCAGAGATGTGCAACCGATCC AAACAGTTATAAAAGCTTGGTAGACAGCTTTCGAATGATTTTCCAAATGGAAGGGTTATTTGGTTTTTACAAGGGAATTCTGCCACCTAT CTTGGCTGAAACCCCAAAAAGAGCAGTGAAGTTTTTCACCTTTGAGCAGTACAAGAAATTGCTGGGATATGTGTCACTGTCACCAGCATT GACATTCGCCATTGCTGGATTGGGATCTGGACTAACAGAAGCCATTGTAGTTAACCCTTTTGAGGTAGTAAAAGTTGGCTTGCAAGCAAA TCGGAACACATTTGCAGAGCAACCATCCACTGTGGGTTATGCAAGACAAATCATTAAGAAGGAAGGCTGGGGACTCCAGGGCCTCAACAA AGGATTAACTGCAACTTTGGGACGACATGGAGTTTTCAACATGGTTTATTTTGGCTTCTACTACAATGTCAAAAACATGATTCCTGTCAA TAAGGATCCAATCTTGGAGTTTTGGAGAAAATTTGGGATTGGTCTTCTCTCGGGGACAATAGCCTCAGTCATTAACATCCCTTTTGATGT TGCCAAAAGTAGGATTCAAGGGCCTCAACCAGTTCCTGGAGAGATCAAGTACAGAACCTGTTTTAAAACAATGGCAACAGTCTATCAGGA AGAAGGGATTTTAGCTTTGTACAAAGGCCTGCTTCCCAAGATTATGAGACTTGGACCAGGTGGTGCAGTGATGCTGCTGGTTTATGAATA >31152_31152_6_FOXN3-SLC25A21_FOXN3_chr14_89747294_ENST00000557258_SLC25A21_chr14_37344209_ENST00000555449_length(amino acids)=523AA_BP=246 MGPVMPPSKKPESSGISVSSGLSQCYGGSGFSKALQEDDDLDFSLPDIRLEEGAMEDEELTNLNWLHESKNLLKSFGESVLRSVSPVQDL DDDTPPSPAHSDMPYDARQNPNCKPPYSFSCLIFMAIEDSPTKRLPVKDIYNWILEHFPYFANAPTGWKNSVRHNLSLNKCFKKVDKERS QSIGKGSLWCIDPEYRQNLIQALKKTPYHPHPHVFNTPPTCPQAYQSTSGPPIWPGSTFFKRNGALLQGLVEICLMHPLDVVKTRFQIQR CATDPNSYKSLVDSFRMIFQMEGLFGFYKGILPPILAETPKRAVKFFTFEQYKKLLGYVSLSPALTFAIAGLGSGLTEAIVVNPFEVVKV GLQANRNTFAEQPSTVGYARQIIKKEGWGLQGLNKGLTATLGRHGVFNMVYFGFYYNVKNMIPVNKDPILEFWRKFGIGLLSGTIASVIN -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for FOXN3-SLC25A21 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for FOXN3-SLC25A21 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for FOXN3-SLC25A21 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |