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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:CSPG4-SON (FusionGDB2 ID:HG1464TG6651) |
Fusion Gene Summary for CSPG4-SON |
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Fusion gene information | Fusion gene name: CSPG4-SON | Fusion gene ID: hg1464tg6651 | Hgene | Tgene | Gene symbol | CSPG4 | SON | Gene ID | 1464 | 6651 |
Gene name | chondroitin sulfate proteoglycan 4 | SON DNA and RNA binding protein | |
Synonyms | HMW-MAA|MCSP|MCSPG|MEL-CSPG|MSK16|NG2 | BASS1|C21orf50|DBP-5|NREBP|SON3|TOKIMS | |
Cytomap | ('CSPG4')('SON') 15q24.2 | 21q22.11 | |
Type of gene | protein-coding | protein-coding | |
Description | chondroitin sulfate proteoglycan 4chondroitin sulfate proteoglycan 4 (melanoma-associated)chondroitin sulfate proteoglycan NG2melanoma chondroitin sulfate proteoglycanmelanoma-associated chondroitin sulfate proteoglycan | protein SONBax antagonist selected in Saccharomyces 1NRE-binding proteinSON DNA binding proteinnegative regulatory element-binding protein | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000308508, | ||
Fusion gene scores | * DoF score | 5 X 4 X 3=60 | 16 X 15 X 5=1200 |
# samples | 5 | 16 | |
** MAII score | log2(5/60*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(16/1200*10)=-2.90689059560852 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: CSPG4 [Title/Abstract] AND SON [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | CSPG4(75977076)-SON(34945612), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | CSPG4-SON seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. CSPG4-SON seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. CSPG4-SON seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. CSPG4-SON seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | CSPG4 | GO:0035556 | intracellular signal transduction | 10587647 |
Hgene | CSPG4 | GO:0050731 | positive regulation of peptidyl-tyrosine phosphorylation | 10587647 |
Tgene | SON | GO:0006397 | mRNA processing | 21504830 |
Tgene | SON | GO:0043066 | negative regulation of apoptotic process | 10509013 |
Tgene | SON | GO:0048024 | regulation of mRNA splicing, via spliceosome | 21504830 |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
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Fusion Gene ORF analysis for CSPG4-SON |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000308508 | ENST00000356577 | CSPG4 | chr15 | 75977076 | - | SON | chr21 | 34945612 | + | 0.00126061 | 0.9987394 |
ENST00000308508 | ENST00000290239 | CSPG4 | chr15 | 75977076 | - | SON | chr21 | 34945612 | + | 0.001214538 | 0.99878544 |
ENST00000308508 | ENST00000381692 | CSPG4 | chr15 | 75977076 | - | SON | chr21 | 34945612 | + | 0.00126061 | 0.9987394 |
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Fusion Genomic Features for CSPG4-SON |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
CSPG4 | chr15 | 75977076 | - | SON | chr21 | 34945613 | + | 0.011987235 | 0.9880128 |
CSPG4 | chr15 | 75977076 | - | SON | chr21 | 34945613 | + | 0.011987235 | 0.9880128 |
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Fusion Protein Features for CSPG4-SON |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr15:75977076/chr21:34945612) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 202_380 | 1483 | 2323.0 | Domain | Laminin G-like 2 |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 30_192 | 1483 | 2323.0 | Domain | Laminin G-like 1 |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 30_639 | 1483 | 2323.0 | Region | Neurite growth inhibition |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 1018_1110 | 1483 | 2323.0 | Repeat | CSPG 6 |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 1126_1216 | 1483 | 2323.0 | Repeat | CSPG 7 |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 1238_1337 | 1483 | 2323.0 | Repeat | CSPG 8 |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 1356_1449 | 1483 | 2323.0 | Repeat | CSPG 9 |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 428_523 | 1483 | 2323.0 | Repeat | CSPG 1 |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 553_645 | 1483 | 2323.0 | Repeat | CSPG 2 |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 662_764 | 1483 | 2323.0 | Repeat | CSPG 3 |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 783_878 | 1483 | 2323.0 | Repeat | CSPG 4 |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 898_989 | 1483 | 2323.0 | Repeat | CSPG 5 |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 2371_2426 | 2321 | 699.6666666666666 | Domain | DRBM | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 2305_2351 | 0 | 2304.0 | Domain | G-patch | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 2371_2426 | 0 | 2304.0 | Domain | DRBM | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 2305_2351 | 2295 | 2427.0 | Domain | G-patch | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 2371_2426 | 2295 | 2427.0 | Domain | DRBM | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 2305_2351 | 0 | 2109.0 | Domain | G-patch | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 2371_2426 | 0 | 2109.0 | Domain | DRBM | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1006_1126 | 0 | 2304.0 | Region | Note=14 X 6 AA repeats of [ED]-R-S-M-M-S | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1147_1179 | 0 | 2304.0 | Region | Note=3 X 11 AA tandem repats of P-P-L-P-P-E-E-P-P-[TME]-[MTG] | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1359_1390 | 0 | 2304.0 | Region | Note=4 X 8 AA tandem repeats of V-L-E-SS-[AVT]-VT | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1925_1994 | 0 | 2304.0 | Region | Note=7 X 7 AA repeats of P-S-R-R-S-R-[TS] | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1934_2013 | 0 | 2304.0 | Region | Note=2 X 19 AA repeats of P-S-R-R-R-R-S-R-S-V-V-R-R-R-S-F-S-I-S | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 2013_2039 | 0 | 2304.0 | Region | Note=3 X tandem repeats of [ST]-P-[VLI]-R-[RL]-[RK]-[RF]-S-R | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 726_895 | 0 | 2304.0 | Region | Note=17 X 10 AA tandem repeats of L-A-[ST]-[NSG]-[TS]-MDSQM | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 912_988 | 0 | 2304.0 | Region | Note=11 X 7 AA tandem repeats of [DR]-P-Y-R-[LI][AG][QHP] | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1006_1126 | 0 | 2109.0 | Region | Note=14 X 6 AA repeats of [ED]-R-S-M-M-S | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1147_1179 | 0 | 2109.0 | Region | Note=3 X 11 AA tandem repats of P-P-L-P-P-E-E-P-P-[TME]-[MTG] | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1359_1390 | 0 | 2109.0 | Region | Note=4 X 8 AA tandem repeats of V-L-E-SS-[AVT]-VT | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1925_1994 | 0 | 2109.0 | Region | Note=7 X 7 AA repeats of P-S-R-R-S-R-[TS] | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1934_2013 | 0 | 2109.0 | Region | Note=2 X 19 AA repeats of P-S-R-R-R-R-S-R-S-V-V-R-R-R-S-F-S-I-S | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 2013_2039 | 0 | 2109.0 | Region | Note=3 X tandem repeats of [ST]-P-[VLI]-R-[RL]-[RK]-[RF]-S-R | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 726_895 | 0 | 2109.0 | Region | Note=17 X 10 AA tandem repeats of L-A-[ST]-[NSG]-[TS]-MDSQM | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 912_988 | 0 | 2109.0 | Region | Note=11 X 7 AA tandem repeats of [DR]-P-Y-R-[LI][AG][QHP] | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1006_1011 | 0 | 2304.0 | Repeat | Note=1-1 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1014_1019 | 0 | 2304.0 | Repeat | Note=1-2 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1021_1026 | 0 | 2304.0 | Repeat | Note=1-3 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1030_1035 | 0 | 2304.0 | Repeat | Note=1-4 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1038_1043 | 0 | 2304.0 | Repeat | Note=1-5 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1046_1051 | 0 | 2304.0 | Repeat | Note=1-6 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1055_1060 | 0 | 2304.0 | Repeat | Note=1-7 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1063_1068 | 0 | 2304.0 | Repeat | Note=1-8 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1071_1076 | 0 | 2304.0 | Repeat | Note=1-9 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1080_1085 | 0 | 2304.0 | Repeat | Note=1-10 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1089_1094 | 0 | 2304.0 | Repeat | Note=1-11 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1100_1105 | 0 | 2304.0 | Repeat | Note=1-12 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1111_1116 | 0 | 2304.0 | Repeat | Note=1-13 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1121_1126 | 0 | 2304.0 | Repeat | Note=1-14 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1925_1931 | 0 | 2304.0 | Repeat | Note=2-1 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1934_1952 | 0 | 2304.0 | Repeat | Note=3-1 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1953_1959 | 0 | 2304.0 | Repeat | Note=2-2 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1960_1966 | 0 | 2304.0 | Repeat | Note=2-3 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1967_1973 | 0 | 2304.0 | Repeat | Note=2-4 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1974_1980 | 0 | 2304.0 | Repeat | Note=2-5 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1981_1987 | 0 | 2304.0 | Repeat | Note=2-6 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1988_1994 | 0 | 2304.0 | Repeat | Note=2-7 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000300278 | 0 | 7 | 1995_2013 | 0 | 2304.0 | Repeat | Note=3-2 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1006_1011 | 0 | 2109.0 | Repeat | Note=1-1 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1014_1019 | 0 | 2109.0 | Repeat | Note=1-2 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1021_1026 | 0 | 2109.0 | Repeat | Note=1-3 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1030_1035 | 0 | 2109.0 | Repeat | Note=1-4 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1038_1043 | 0 | 2109.0 | Repeat | Note=1-5 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1046_1051 | 0 | 2109.0 | Repeat | Note=1-6 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1055_1060 | 0 | 2109.0 | Repeat | Note=1-7 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1063_1068 | 0 | 2109.0 | Repeat | Note=1-8 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1071_1076 | 0 | 2109.0 | Repeat | Note=1-9 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1080_1085 | 0 | 2109.0 | Repeat | Note=1-10 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1089_1094 | 0 | 2109.0 | Repeat | Note=1-11 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1100_1105 | 0 | 2109.0 | Repeat | Note=1-12 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1111_1116 | 0 | 2109.0 | Repeat | Note=1-13 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1121_1126 | 0 | 2109.0 | Repeat | Note=1-14 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1925_1931 | 0 | 2109.0 | Repeat | Note=2-1 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1934_1952 | 0 | 2109.0 | Repeat | Note=3-1 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1953_1959 | 0 | 2109.0 | Repeat | Note=2-2 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1960_1966 | 0 | 2109.0 | Repeat | Note=2-3 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1967_1973 | 0 | 2109.0 | Repeat | Note=2-4 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1974_1980 | 0 | 2109.0 | Repeat | Note=2-5 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1981_1987 | 0 | 2109.0 | Repeat | Note=2-6 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1988_1994 | 0 | 2109.0 | Repeat | Note=2-7 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000381679 | 0 | 5 | 1995_2013 | 0 | 2109.0 | Repeat | Note=3-2 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 639_1586 | 1483 | 2323.0 | Compositional bias | Note=Gly/Ser-rich (glycosaminoglycan attachment domain) |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 2320_2322 | 1483 | 2323.0 | Motif | Note=PDZ-binding |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 1586_2221 | 1483 | 2323.0 | Region | Neurite growth inhibition |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 1587_2221 | 1483 | 2323.0 | Region | Note=Cysteine-containing |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 1473_1563 | 1483 | 2323.0 | Repeat | CSPG 10 |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 1581_1679 | 1483 | 2323.0 | Repeat | CSPG 11 |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 1704_1803 | 1483 | 2323.0 | Repeat | CSPG 12 |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 1832_1924 | 1483 | 2323.0 | Repeat | CSPG 13 |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 1941_2029 | 1483 | 2323.0 | Repeat | CSPG 14 |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 2038_2147 | 1483 | 2323.0 | Repeat | CSPG 15 |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 2246_2322 | 1483 | 2323.0 | Topological domain | Cytoplasmic |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 30_2224 | 1483 | 2323.0 | Topological domain | Extracellular |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 2225_2245 | 1483 | 2323.0 | Transmembrane | Helical |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 2305_2351 | 2321 | 699.6666666666666 | Domain | G-patch | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1006_1126 | 2321 | 699.6666666666666 | Region | Note=14 X 6 AA repeats of [ED]-R-S-M-M-S | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1147_1179 | 2321 | 699.6666666666666 | Region | Note=3 X 11 AA tandem repats of P-P-L-P-P-E-E-P-P-[TME]-[MTG] | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1359_1390 | 2321 | 699.6666666666666 | Region | Note=4 X 8 AA tandem repeats of V-L-E-SS-[AVT]-VT | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1925_1994 | 2321 | 699.6666666666666 | Region | Note=7 X 7 AA repeats of P-S-R-R-S-R-[TS] | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1934_2013 | 2321 | 699.6666666666666 | Region | Note=2 X 19 AA repeats of P-S-R-R-R-R-S-R-S-V-V-R-R-R-S-F-S-I-S | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 2013_2039 | 2321 | 699.6666666666666 | Region | Note=3 X tandem repeats of [ST]-P-[VLI]-R-[RL]-[RK]-[RF]-S-R | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 726_895 | 2321 | 699.6666666666666 | Region | Note=17 X 10 AA tandem repeats of L-A-[ST]-[NSG]-[TS]-MDSQM | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 912_988 | 2321 | 699.6666666666666 | Region | Note=11 X 7 AA tandem repeats of [DR]-P-Y-R-[LI][AG][QHP] | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1006_1126 | 2295 | 2427.0 | Region | Note=14 X 6 AA repeats of [ED]-R-S-M-M-S | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1147_1179 | 2295 | 2427.0 | Region | Note=3 X 11 AA tandem repats of P-P-L-P-P-E-E-P-P-[TME]-[MTG] | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1359_1390 | 2295 | 2427.0 | Region | Note=4 X 8 AA tandem repeats of V-L-E-SS-[AVT]-VT | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1925_1994 | 2295 | 2427.0 | Region | Note=7 X 7 AA repeats of P-S-R-R-S-R-[TS] | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1934_2013 | 2295 | 2427.0 | Region | Note=2 X 19 AA repeats of P-S-R-R-R-R-S-R-S-V-V-R-R-R-S-F-S-I-S | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 2013_2039 | 2295 | 2427.0 | Region | Note=3 X tandem repeats of [ST]-P-[VLI]-R-[RL]-[RK]-[RF]-S-R | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 726_895 | 2295 | 2427.0 | Region | Note=17 X 10 AA tandem repeats of L-A-[ST]-[NSG]-[TS]-MDSQM | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 912_988 | 2295 | 2427.0 | Region | Note=11 X 7 AA tandem repeats of [DR]-P-Y-R-[LI][AG][QHP] | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1006_1011 | 2321 | 699.6666666666666 | Repeat | Note=1-1 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1014_1019 | 2321 | 699.6666666666666 | Repeat | Note=1-2 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1021_1026 | 2321 | 699.6666666666666 | Repeat | Note=1-3 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1030_1035 | 2321 | 699.6666666666666 | Repeat | Note=1-4 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1038_1043 | 2321 | 699.6666666666666 | Repeat | Note=1-5 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1046_1051 | 2321 | 699.6666666666666 | Repeat | Note=1-6 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1055_1060 | 2321 | 699.6666666666666 | Repeat | Note=1-7 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1063_1068 | 2321 | 699.6666666666666 | Repeat | Note=1-8 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1071_1076 | 2321 | 699.6666666666666 | Repeat | Note=1-9 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1080_1085 | 2321 | 699.6666666666666 | Repeat | Note=1-10 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1089_1094 | 2321 | 699.6666666666666 | Repeat | Note=1-11 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1100_1105 | 2321 | 699.6666666666666 | Repeat | Note=1-12 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1111_1116 | 2321 | 699.6666666666666 | Repeat | Note=1-13 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1121_1126 | 2321 | 699.6666666666666 | Repeat | Note=1-14 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1925_1931 | 2321 | 699.6666666666666 | Repeat | Note=2-1 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1934_1952 | 2321 | 699.6666666666666 | Repeat | Note=3-1 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1953_1959 | 2321 | 699.6666666666666 | Repeat | Note=2-2 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1960_1966 | 2321 | 699.6666666666666 | Repeat | Note=2-3 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1967_1973 | 2321 | 699.6666666666666 | Repeat | Note=2-4 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1974_1980 | 2321 | 699.6666666666666 | Repeat | Note=2-5 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1981_1987 | 2321 | 699.6666666666666 | Repeat | Note=2-6 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1988_1994 | 2321 | 699.6666666666666 | Repeat | Note=2-7 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000290239 | 8 | 13 | 1995_2013 | 2321 | 699.6666666666666 | Repeat | Note=3-2 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1006_1011 | 2295 | 2427.0 | Repeat | Note=1-1 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1014_1019 | 2295 | 2427.0 | Repeat | Note=1-2 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1021_1026 | 2295 | 2427.0 | Repeat | Note=1-3 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1030_1035 | 2295 | 2427.0 | Repeat | Note=1-4 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1038_1043 | 2295 | 2427.0 | Repeat | Note=1-5 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1046_1051 | 2295 | 2427.0 | Repeat | Note=1-6 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1055_1060 | 2295 | 2427.0 | Repeat | Note=1-7 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1063_1068 | 2295 | 2427.0 | Repeat | Note=1-8 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1071_1076 | 2295 | 2427.0 | Repeat | Note=1-9 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1080_1085 | 2295 | 2427.0 | Repeat | Note=1-10 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1089_1094 | 2295 | 2427.0 | Repeat | Note=1-11 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1100_1105 | 2295 | 2427.0 | Repeat | Note=1-12 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1111_1116 | 2295 | 2427.0 | Repeat | Note=1-13 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1121_1126 | 2295 | 2427.0 | Repeat | Note=1-14 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1925_1931 | 2295 | 2427.0 | Repeat | Note=2-1 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1934_1952 | 2295 | 2427.0 | Repeat | Note=3-1 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1953_1959 | 2295 | 2427.0 | Repeat | Note=2-2 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1960_1966 | 2295 | 2427.0 | Repeat | Note=2-3 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1967_1973 | 2295 | 2427.0 | Repeat | Note=2-4 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1974_1980 | 2295 | 2427.0 | Repeat | Note=2-5 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1981_1987 | 2295 | 2427.0 | Repeat | Note=2-6 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1988_1994 | 2295 | 2427.0 | Repeat | Note=2-7 | |
Tgene | SON | chr15:75977076 | chr21:34945612 | ENST00000356577 | 7 | 12 | 1995_2013 | 2295 | 2427.0 | Repeat | Note=3-2 |
Top |
Fusion Gene Sequence for CSPG4-SON |
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>19903_19903_1_CSPG4-SON_CSPG4_chr15_75977076_ENST00000308508_SON_chr21_34945612_ENST00000290239_length(transcript)=6020nt_BP=4542nt GCGCCCAGGAGCAGAGCCGCGCTCGCTCCACTCAGCTCCCAGCTCCCAGGACTCCGCTGGCTCCTCGCAAGTCCTGCCGCCCAGCCCGCC GGGATGCAGTCCGGGCCGCGGCCCCCACTTCCAGCCCCCGGCCTGGCCTTGGCTTTGACCCTGACTATGTTGGCCAGACTTGCATCCGCG GCTTCCTTCTTCGGTGAGAACCACCTGGAGGTGCCTGTGGCCACGGCTCTGACCGACATAGACCTGCAGCTGCAGTTCTCCACGTCCCAG CCCGAAGCCCTCCTTCTCCTGGCAGCAGGCCCAGCTGACCACCTCCTGCTGCAGCTCTACTCTGGACGCCTGCAGGTCAGACTTGTTCTG GGCCAGGAGGAGCTGAGGCTGCAGACTCCAGCAGAGACGCTGCTGAGTGACTCCATCCCCCACACTGTGGTGCTGACTGTCGTAGAGGGC TGGGCCACGTTGTCAGTCGATGGGTTTCTGAACGCCTCCTCAGCAGTCCCAGGAGCCCCCCTAGAGGTCCCCTATGGGCTCTTTGTTGGG GGCACTGGGACCCTTGGCCTGCCCTACCTGAGGGGAACCAGCCGACCCCTGAGGGGTTGCCTCCATGCAGCCACCCTCAATGGCCGCAGC CTCCTCCGGCCTCTGACCCCCGATGTGCATGAGGGCTGTGCTGAAGAGTTTTCTGCCAGTGATGATGTGGCCCTGGGCTTCTCTGGGCCC CACTCTCTGGCTGCCTTCCCTGCCTGGGGCACTCAGGACGAAGGAACCCTAGAGTTTACACTCACCACACAGAGCCGGCAGGCACCCTTG GCCTTCCAGGCAGGGGGCCGGCGTGGGGACTTCATCTATGTGGACATATTTGAGGGCCACCTGCGGGCCGTGGTGGAGAAGGGCCAGGGT ACCGTATTGCTCCACAACAGTGTGCCTGTGGCCGATGGGCAGCCCCATGAGGTCAGTGTCCACATCAATGCTCACCGGCTGGAAATCTCC GTGGACCAGTACCCTACGCATACTTCGAACCGAGGAGTCCTCAGCTACCTGGAGCCACGGGGCAGTCTCCTTCTCGGGGGGCTGGATGCA GAGGCCTCTCGTCACCTCCAGGAACACCGCCTGGGCCTGACACCAGAGGCCACCAATGCCTCCCTGCTGGGCTGCATGGAAGACCTCAGT GTCAATGGCCAGAGGCGGGGGCTGCGGGAAGCTTTGCTGACGCGCAACATGGCAGCCGGCTGCAGGCTGGAGGAGGAGGAGTATGAGGAC GATGCCTATGGACATTATGAAGCTTTCTCCACCCTGGCCCCTGAGGCTTGGCCAGCCATGGAGCTGCCTGAGCCATGCGTGCCTGAGCCA GGGCTGCCTCCTGTCTTTGCCAATTTCACCCAGCTGCTGACTATCAGCCCACTGGTGGTGGCCGAGGGGGGCACAGCCTGGCTTGAGTGG AGGCATGTGCAGCCCACGCTGGACCTGATGGAGGCTGAGCTGCGCAAATCCCAGGTGCTGTTCAGCGTGACCCGAGGGGCACGCCATGGC GAGCTCGAGCTGGACATCCCGGGAGCCCAGGCACGAAAAATGTTCACCCTCCTGGACGTGGTGAACCGCAAGGCCCGCTTCATCCACGAT GGCTCTGAGGACACCTCCGACCAGCTGGTGCTGGAGGTGTCGGTGACGGCTCGGGTGCCCATGCCCTCATGCCTTCGGAGGGGCCAAACA TACCTCCTGCCCATCCAGGTCAACCCTGTCAATGACCCACCCCACATCATCTTCCCACATGGCAGCCTCATGGTGATCCTGGAACACACG CAGAAGCCGCTGGGGCCTGAGGTTTTCCAGGCCTATGACCCGGACTCTGCCTGTGAGGGCCTCACCTTCCAGGTCCTTGGCACCTCCTCT GGCCTCCCCGTGGAGCGCCGAGACCAGCCTGGGGAGCCGGCGACCGAGTTCTCCTGCCGGGAGTTGGAGGCCGGCAGCCTAGTCTATGTC CACCGCGGTGGTCCTGCACAGGACTTGACGTTCCGGGTCAGCGATGGACTGCAGGCCAGCCCCCCGGCCACGCTGAAGGTGGTGGCCATC CGGCCGGCCATACAGATCCACCGCAGCACAGGGTTGCGACTGGCCCAAGGCTCTGCCATGCCCATCTTGCCCGCCAACCTGTCGGTGGAG ACCAATGCCGTGGGGCAGGATGTGAGCGTGCTGTTCCGCGTCACTGGGGCCCTGCAGTTTGGGGAGCTGCAGAAGCAGGGGGCAGGTGGG GTGGAGGGTGCTGAGTGGTGGGCCACACAGGCGTTCCACCAGCGGGATGTGGAGCAGGGCCGCGTGAGGTACCTGAGCACTGACCCACAG CACCACGCTTACGACACCGTGGAGAACCTGGCCCTGGAGGTGCAGGTGGGCCAGGAGATCCTGAGCAATCTGTCCTTCCCAGTGACCATC CAGAGAGCCACTGTGTGGATGCTGCGGCTGGAGCCACTGCACACTCAGAACACCCAGCAGGAGACCCTCACCACAGCCCACCTGGAGGCC ACCCTGGAGGAGGCAGGCCCAAGCCCCCCAACCTTCCATTATGAGGTGGTTCAGGCTCCCAGGAAAGGCAACCTTCAACTACAGGGCACA AGGCTGTCAGATGGCCAGGGCTTCACCCAGGATGACATACAGGCTGGCCGGGTGACCTATGGGGCCACAGCACGTGCCTCAGAGGCAGTC GAGGACACCTTCCGTTTCCGTGTCACAGCTCCACCATATTTCTCCCCACTCTATACCTTCCCCATCCACATTGGTGGTGACCCAGATGCG CCTGTCCTCACCAATGTCCTCCTCGTGGTGCCTGAGGGTGGTGAGGGTGTCCTCTCTGCTGACCACCTCTTTGTCAAGAGTCTCAACAGT GCCAGCTACCTCTATGAGGTCATGGAGCGGCCCCGCCATGGGAGGTTGGCTTGGCGTGGGACACAGGACAAGACCACTATGGTGACATCC TTCACCAATGAAGACCTGTTGCGTGGCCGGCTGGTCTACCAGCATGATGACTCCGAGACCACAGAAGATGATATCCCATTTGTTGCTACC CGCCAGGGCGAGAGCAGTGGTGACATGGCCTGGGAGGAGGTACGGGGTGTCTTCCGAGTGGCCATCCAGCCCGTGAATGACCACGCCCCT GTGCAGACCATCAGCCGGATCTTCCATGTGGCCCGGGGTGGGCGGCGGCTGCTGACTACAGACGACGTGGCCTTCAGCGATGCTGACTCG GGCTTTGCTGACGCCCAGCTGGTGCTTACCCGCAAGGACCTCCTCTTTGGCAGTATCGTGGCCGTAGATGAGCCCACGCGGCCCATCTAC CGCTTCACCCAGGAGGACCTCAGGAAGAGGCGAGTACTGTTCGTGCACTCAGGGGCTGACCGTGGCTGGATCCAGCTGCAGGTGTCCGAC GGGCAACACCAGGCCACTGCGCTGCTGGAGGTGCAGGCCTCGGAACCCTACCTCCGTGTGGCCAACGGCTCCAGCCTTGTGGTCCCTCAA GGAGGCCAGGGCACCATCGACACGGCCGTGCTCCACCTGGACACCAACCTCGACATCCGCAGTGGGGATGAGGTCCACTACCACGTCACA GCTGGCCCTCGCTGGGGACAGCTAGTCCGGGCTGGTCAGCCAGCCACAGCCTTCTCCCAGCAGGACCTGCTGGATGGGGCCGTTCTCTAT AGCCACAATGGCAGCCTCAGCCCCCGCGACACCATGGCCTTCTCCGTGGAAGCAGGGCCAGTGCACACGGATGCCACCCTACAAGTGACC ATTGCCCTAGAGGGCCCACTGGCCCCACTGAAGCTGGTCCGGCACAAGAAGATCTACGTCTTCCAGGGAGAGGCAGCTGAGATCAGAAGG GACCAGCTGGAGGCAGCCCAGGAGGCAGTGCCACCTGCAGACATCGTATTCTCAGTGAAGAGCCCACCGAGTGCCGGCTACCTGGTGATG GTGTCGCGTGGCGCCTTGGCAGATGAGCCACCCAGCCTGGACCCTGTGCAGAGCTTCTCCCAGGAGGCAGTGGACACAGGCAGGGTCCTG TACCTGCACTCCCGCCCTGAGGCCTGGAGCGATGCCTTCTCGCTGGATGTGGCCTCAGGCCTGGGTGCTCCCCTCGAGGGCGTCCTTGTG GAGCTGGAGGTGCTGCCCGCTGCCATCCCACTAGAGGCGCAAAACTTCAGCGTCCCTGAGGGTGGCAGCCTCACCCTGGCCCCTCCACTG CTCCGTGTCTCCGGGCCCTACTTCCCCACTCTCCTGGGCCTCAGCCTGCAGGTGCTGGAGCCACCCCAGCATGGAGCCCTGCAGAAGGAG GACGGACCTCAAGCCAGGACCCTCAGCGCCTTCTCCTGGAGAATGGTGGAAGAGCAGCTGATCCGCTACGTGCATGACGGGAGCGAGACA CTGACAGACAGTTTTGTCCTGATGGCTAATGCCTCCGAGATGGATCGCCAGAGCCATCCTGTGGCCTTCACTGTCACTGTCCTGCCTGTC AATGACCAACCCCCCATCCTCACTACAAACACAGGCCTGCAGGATCAGTTCTTAAGAGCAGCCCCGGTAACTGGAGGAATGGGAGCCGTT TTGATGAGAAAAATGGGCTGGAGAGAAGGAGAAGGATTAGGAAAAAACAAAGAAGGCAATAAGGAACCCATCCTAGTTGATTTTAAGACA GACCGAAAAGGTCTTGTTGCAGTAGGAGAAAGAGCACAAAAGAGGTCTGGGAACTTCTCTGCTGCAATGAAAGATCTGTCAGGCAAACAT CCTGTGTCTGCTTTGATGGAGATCTGTAATAAAAGAAGGTGGCAACCACCTGAATTTCTATTGGTCCATGATAGTGGCCCTGATCATCGC AAACATTTTCTCTTTAGGGTATTGAGAAATGGAGCCCTTACCAGACCCAATTGTATGTTTTTCTTGAATAGGTATTGATAAATGGAAGCG CTTACCAGCCCAGCTTTGCCAGCCCTAATAAGAAGCATGCTAAAGCCACAGCAGCTACTGTGGTTCTTCAAGCAATGGGCCTTGTACCAA AGGACCTCATGGCTAATGCCACTTGCTTCAGGAGTGCCTCACGTAGATAGATTGAGGTTTTATAATAATCATTTCAGAATTTTACTCTGC ATCACAATGTATTTCCTCTTTAATGTTGTAAATATTTGGCAATTTAAGACATTGTGTAAAAAGCAATCTGTAAAAACATCTCCAGGCTTT GATTTTTGTACCATGGAAATTGTATTTAACCATACAGGGTTTTGGTATGTTTATATTGTTTACCTTAGTGATGTATTTGTTTAAGTGGCT AACATCCAAACGACTGTTTGAAGGCATCAGAGTAATCTTCAGTGTGGAATGTTAAATAACGCTTTTATACTGTATTTTGTACTATGATGT AACTCCCCTTCCTTATGGCTAGGCTACTGTAACACTTGCCTGTAATCAGTGAAGGGCTGTGCACCTTGTACTATTTCACAATGGGTTCTG CTGGACAGATAATGGGCCAGTGTTATTGAGGTGATCAAGATCTGTTCCACAGGGCTAATGCCACCATCTCCCCTCAAAATTTTGTAGAGG TTCTAAAAAGAAAGTGGTATGTTGTGTGATGATCAGCACTAAGTCCTGCATTCCTGTTAAAGCCACTTGGGTCATAAGAAGGGAGTAAAA AATGAAGTCTGACTAGAATTCTATTGCAGAGGCCAGTACATTTAGTATGGCATTGAGTTGTGATATAGTTTTACTTTGATGTGCATTTTG AATTTCAGCTACACCTAGATAGACGTAAAATGATAATTAAAATGCTGTAACCAACTTATCTAATAAAATTGGCAACCAGCCACTATTTTG TTGACTATGAGAAAGTTAAAAGTTTATGTTAATTTTTAGGGTCTGATAGAATATTTCATGTGTATTACAGTGGTATTCATATGCTATGTC >19903_19903_1_CSPG4-SON_CSPG4_chr15_75977076_ENST00000308508_SON_chr21_34945612_ENST00000290239_length(amino acids)=1614AA_BP=1483 MQSGPRPPLPAPGLALALTLTMLARLASAASFFGENHLEVPVATALTDIDLQLQFSTSQPEALLLLAAGPADHLLLQLYSGRLQVRLVLG QEELRLQTPAETLLSDSIPHTVVLTVVEGWATLSVDGFLNASSAVPGAPLEVPYGLFVGGTGTLGLPYLRGTSRPLRGCLHAATLNGRSL LRPLTPDVHEGCAEEFSASDDVALGFSGPHSLAAFPAWGTQDEGTLEFTLTTQSRQAPLAFQAGGRRGDFIYVDIFEGHLRAVVEKGQGT VLLHNSVPVADGQPHEVSVHINAHRLEISVDQYPTHTSNRGVLSYLEPRGSLLLGGLDAEASRHLQEHRLGLTPEATNASLLGCMEDLSV NGQRRGLREALLTRNMAAGCRLEEEEYEDDAYGHYEAFSTLAPEAWPAMELPEPCVPEPGLPPVFANFTQLLTISPLVVAEGGTAWLEWR HVQPTLDLMEAELRKSQVLFSVTRGARHGELELDIPGAQARKMFTLLDVVNRKARFIHDGSEDTSDQLVLEVSVTARVPMPSCLRRGQTY LLPIQVNPVNDPPHIIFPHGSLMVILEHTQKPLGPEVFQAYDPDSACEGLTFQVLGTSSGLPVERRDQPGEPATEFSCRELEAGSLVYVH RGGPAQDLTFRVSDGLQASPPATLKVVAIRPAIQIHRSTGLRLAQGSAMPILPANLSVETNAVGQDVSVLFRVTGALQFGELQKQGAGGV EGAEWWATQAFHQRDVEQGRVRYLSTDPQHHAYDTVENLALEVQVGQEILSNLSFPVTIQRATVWMLRLEPLHTQNTQQETLTTAHLEAT LEEAGPSPPTFHYEVVQAPRKGNLQLQGTRLSDGQGFTQDDIQAGRVTYGATARASEAVEDTFRFRVTAPPYFSPLYTFPIHIGGDPDAP VLTNVLLVVPEGGEGVLSADHLFVKSLNSASYLYEVMERPRHGRLAWRGTQDKTTMVTSFTNEDLLRGRLVYQHDDSETTEDDIPFVATR QGESSGDMAWEEVRGVFRVAIQPVNDHAPVQTISRIFHVARGGRRLLTTDDVAFSDADSGFADAQLVLTRKDLLFGSIVAVDEPTRPIYR FTQEDLRKRRVLFVHSGADRGWIQLQVSDGQHQATALLEVQASEPYLRVANGSSLVVPQGGQGTIDTAVLHLDTNLDIRSGDEVHYHVTA GPRWGQLVRAGQPATAFSQQDLLDGAVLYSHNGSLSPRDTMAFSVEAGPVHTDATLQVTIALEGPLAPLKLVRHKKIYVFQGEAAEIRRD QLEAAQEAVPPADIVFSVKSPPSAGYLVMVSRGALADEPPSLDPVQSFSQEAVDTGRVLYLHSRPEAWSDAFSLDVASGLGAPLEGVLVE LEVLPAAIPLEAQNFSVPEGGSLTLAPPLLRVSGPYFPTLLGLSLQVLEPPQHGALQKEDGPQARTLSAFSWRMVEEQLIRYVHDGSETL TDSFVLMANASEMDRQSHPVAFTVTVLPVNDQPPILTTNTGLQDQFLRAAPVTGGMGAVLMRKMGWREGEGLGKNKEGNKEPILVDFKTD -------------------------------------------------------------- >19903_19903_2_CSPG4-SON_CSPG4_chr15_75977076_ENST00000308508_SON_chr21_34945612_ENST00000356577_length(transcript)=5995nt_BP=4542nt GCGCCCAGGAGCAGAGCCGCGCTCGCTCCACTCAGCTCCCAGCTCCCAGGACTCCGCTGGCTCCTCGCAAGTCCTGCCGCCCAGCCCGCC GGGATGCAGTCCGGGCCGCGGCCCCCACTTCCAGCCCCCGGCCTGGCCTTGGCTTTGACCCTGACTATGTTGGCCAGACTTGCATCCGCG GCTTCCTTCTTCGGTGAGAACCACCTGGAGGTGCCTGTGGCCACGGCTCTGACCGACATAGACCTGCAGCTGCAGTTCTCCACGTCCCAG CCCGAAGCCCTCCTTCTCCTGGCAGCAGGCCCAGCTGACCACCTCCTGCTGCAGCTCTACTCTGGACGCCTGCAGGTCAGACTTGTTCTG GGCCAGGAGGAGCTGAGGCTGCAGACTCCAGCAGAGACGCTGCTGAGTGACTCCATCCCCCACACTGTGGTGCTGACTGTCGTAGAGGGC TGGGCCACGTTGTCAGTCGATGGGTTTCTGAACGCCTCCTCAGCAGTCCCAGGAGCCCCCCTAGAGGTCCCCTATGGGCTCTTTGTTGGG GGCACTGGGACCCTTGGCCTGCCCTACCTGAGGGGAACCAGCCGACCCCTGAGGGGTTGCCTCCATGCAGCCACCCTCAATGGCCGCAGC CTCCTCCGGCCTCTGACCCCCGATGTGCATGAGGGCTGTGCTGAAGAGTTTTCTGCCAGTGATGATGTGGCCCTGGGCTTCTCTGGGCCC CACTCTCTGGCTGCCTTCCCTGCCTGGGGCACTCAGGACGAAGGAACCCTAGAGTTTACACTCACCACACAGAGCCGGCAGGCACCCTTG GCCTTCCAGGCAGGGGGCCGGCGTGGGGACTTCATCTATGTGGACATATTTGAGGGCCACCTGCGGGCCGTGGTGGAGAAGGGCCAGGGT ACCGTATTGCTCCACAACAGTGTGCCTGTGGCCGATGGGCAGCCCCATGAGGTCAGTGTCCACATCAATGCTCACCGGCTGGAAATCTCC GTGGACCAGTACCCTACGCATACTTCGAACCGAGGAGTCCTCAGCTACCTGGAGCCACGGGGCAGTCTCCTTCTCGGGGGGCTGGATGCA GAGGCCTCTCGTCACCTCCAGGAACACCGCCTGGGCCTGACACCAGAGGCCACCAATGCCTCCCTGCTGGGCTGCATGGAAGACCTCAGT GTCAATGGCCAGAGGCGGGGGCTGCGGGAAGCTTTGCTGACGCGCAACATGGCAGCCGGCTGCAGGCTGGAGGAGGAGGAGTATGAGGAC GATGCCTATGGACATTATGAAGCTTTCTCCACCCTGGCCCCTGAGGCTTGGCCAGCCATGGAGCTGCCTGAGCCATGCGTGCCTGAGCCA GGGCTGCCTCCTGTCTTTGCCAATTTCACCCAGCTGCTGACTATCAGCCCACTGGTGGTGGCCGAGGGGGGCACAGCCTGGCTTGAGTGG AGGCATGTGCAGCCCACGCTGGACCTGATGGAGGCTGAGCTGCGCAAATCCCAGGTGCTGTTCAGCGTGACCCGAGGGGCACGCCATGGC GAGCTCGAGCTGGACATCCCGGGAGCCCAGGCACGAAAAATGTTCACCCTCCTGGACGTGGTGAACCGCAAGGCCCGCTTCATCCACGAT GGCTCTGAGGACACCTCCGACCAGCTGGTGCTGGAGGTGTCGGTGACGGCTCGGGTGCCCATGCCCTCATGCCTTCGGAGGGGCCAAACA TACCTCCTGCCCATCCAGGTCAACCCTGTCAATGACCCACCCCACATCATCTTCCCACATGGCAGCCTCATGGTGATCCTGGAACACACG CAGAAGCCGCTGGGGCCTGAGGTTTTCCAGGCCTATGACCCGGACTCTGCCTGTGAGGGCCTCACCTTCCAGGTCCTTGGCACCTCCTCT GGCCTCCCCGTGGAGCGCCGAGACCAGCCTGGGGAGCCGGCGACCGAGTTCTCCTGCCGGGAGTTGGAGGCCGGCAGCCTAGTCTATGTC CACCGCGGTGGTCCTGCACAGGACTTGACGTTCCGGGTCAGCGATGGACTGCAGGCCAGCCCCCCGGCCACGCTGAAGGTGGTGGCCATC CGGCCGGCCATACAGATCCACCGCAGCACAGGGTTGCGACTGGCCCAAGGCTCTGCCATGCCCATCTTGCCCGCCAACCTGTCGGTGGAG ACCAATGCCGTGGGGCAGGATGTGAGCGTGCTGTTCCGCGTCACTGGGGCCCTGCAGTTTGGGGAGCTGCAGAAGCAGGGGGCAGGTGGG GTGGAGGGTGCTGAGTGGTGGGCCACACAGGCGTTCCACCAGCGGGATGTGGAGCAGGGCCGCGTGAGGTACCTGAGCACTGACCCACAG CACCACGCTTACGACACCGTGGAGAACCTGGCCCTGGAGGTGCAGGTGGGCCAGGAGATCCTGAGCAATCTGTCCTTCCCAGTGACCATC CAGAGAGCCACTGTGTGGATGCTGCGGCTGGAGCCACTGCACACTCAGAACACCCAGCAGGAGACCCTCACCACAGCCCACCTGGAGGCC ACCCTGGAGGAGGCAGGCCCAAGCCCCCCAACCTTCCATTATGAGGTGGTTCAGGCTCCCAGGAAAGGCAACCTTCAACTACAGGGCACA AGGCTGTCAGATGGCCAGGGCTTCACCCAGGATGACATACAGGCTGGCCGGGTGACCTATGGGGCCACAGCACGTGCCTCAGAGGCAGTC GAGGACACCTTCCGTTTCCGTGTCACAGCTCCACCATATTTCTCCCCACTCTATACCTTCCCCATCCACATTGGTGGTGACCCAGATGCG CCTGTCCTCACCAATGTCCTCCTCGTGGTGCCTGAGGGTGGTGAGGGTGTCCTCTCTGCTGACCACCTCTTTGTCAAGAGTCTCAACAGT GCCAGCTACCTCTATGAGGTCATGGAGCGGCCCCGCCATGGGAGGTTGGCTTGGCGTGGGACACAGGACAAGACCACTATGGTGACATCC TTCACCAATGAAGACCTGTTGCGTGGCCGGCTGGTCTACCAGCATGATGACTCCGAGACCACAGAAGATGATATCCCATTTGTTGCTACC CGCCAGGGCGAGAGCAGTGGTGACATGGCCTGGGAGGAGGTACGGGGTGTCTTCCGAGTGGCCATCCAGCCCGTGAATGACCACGCCCCT GTGCAGACCATCAGCCGGATCTTCCATGTGGCCCGGGGTGGGCGGCGGCTGCTGACTACAGACGACGTGGCCTTCAGCGATGCTGACTCG GGCTTTGCTGACGCCCAGCTGGTGCTTACCCGCAAGGACCTCCTCTTTGGCAGTATCGTGGCCGTAGATGAGCCCACGCGGCCCATCTAC CGCTTCACCCAGGAGGACCTCAGGAAGAGGCGAGTACTGTTCGTGCACTCAGGGGCTGACCGTGGCTGGATCCAGCTGCAGGTGTCCGAC GGGCAACACCAGGCCACTGCGCTGCTGGAGGTGCAGGCCTCGGAACCCTACCTCCGTGTGGCCAACGGCTCCAGCCTTGTGGTCCCTCAA GGAGGCCAGGGCACCATCGACACGGCCGTGCTCCACCTGGACACCAACCTCGACATCCGCAGTGGGGATGAGGTCCACTACCACGTCACA GCTGGCCCTCGCTGGGGACAGCTAGTCCGGGCTGGTCAGCCAGCCACAGCCTTCTCCCAGCAGGACCTGCTGGATGGGGCCGTTCTCTAT AGCCACAATGGCAGCCTCAGCCCCCGCGACACCATGGCCTTCTCCGTGGAAGCAGGGCCAGTGCACACGGATGCCACCCTACAAGTGACC ATTGCCCTAGAGGGCCCACTGGCCCCACTGAAGCTGGTCCGGCACAAGAAGATCTACGTCTTCCAGGGAGAGGCAGCTGAGATCAGAAGG GACCAGCTGGAGGCAGCCCAGGAGGCAGTGCCACCTGCAGACATCGTATTCTCAGTGAAGAGCCCACCGAGTGCCGGCTACCTGGTGATG GTGTCGCGTGGCGCCTTGGCAGATGAGCCACCCAGCCTGGACCCTGTGCAGAGCTTCTCCCAGGAGGCAGTGGACACAGGCAGGGTCCTG TACCTGCACTCCCGCCCTGAGGCCTGGAGCGATGCCTTCTCGCTGGATGTGGCCTCAGGCCTGGGTGCTCCCCTCGAGGGCGTCCTTGTG GAGCTGGAGGTGCTGCCCGCTGCCATCCCACTAGAGGCGCAAAACTTCAGCGTCCCTGAGGGTGGCAGCCTCACCCTGGCCCCTCCACTG CTCCGTGTCTCCGGGCCCTACTTCCCCACTCTCCTGGGCCTCAGCCTGCAGGTGCTGGAGCCACCCCAGCATGGAGCCCTGCAGAAGGAG GACGGACCTCAAGCCAGGACCCTCAGCGCCTTCTCCTGGAGAATGGTGGAAGAGCAGCTGATCCGCTACGTGCATGACGGGAGCGAGACA CTGACAGACAGTTTTGTCCTGATGGCTAATGCCTCCGAGATGGATCGCCAGAGCCATCCTGTGGCCTTCACTGTCACTGTCCTGCCTGTC AATGACCAACCCCCCATCCTCACTACAAACACAGGCCTGCAGGATCAGTTCTTAAGAGCAGCCCCGGTAACTGGAGGAATGGGAGCCGTT TTGATGAGAAAAATGGGCTGGAGAGAAGGAGAAGGATTAGGAAAAAACAAAGAAGGCAATAAGGAACCCATCCTAGTTGATTTTAAGACA GACCGAAAAGGTCTTGTTGCAGTAGGAGAAAGAGCACAAAAGAGGTCTGGGAACTTCTCTGCTGCAATGAAAGATCTGTCAGGCAAACAT CCTGTGTCTGCTTTGATGGAGATCTGTAATAAAAGAAGGTGGCAACCACCTGAATTTCTATTGGTCCATGATAGTGGCCCTGATCATCGC AAACATTTTCTCTTTAGGGTATTGAGAAATGGAGCCCTTACCAGACCCAATTGTATGTTTTTCTTGAATAGGTATTGATAAATGGAAGCG CTTACCAGCCCAGCTTTGCCAGCCCTAATAAGAAGCATGCTAAAGCCACAGCAGCTACTGTGGTTCTTCAAGCAATGGGCCTTGTACCAA AGGACCTCATGGCTAATGCCACTTGCTTCAGGAGTGCCTCACGTAGATAGATTGAGGTTTTATAATAATCATTTCAGAATTTTACTCTGC ATCACAATGTATTTCCTCTTTAATGTTGTAAATATTTGGCAATTTAAGACATTGTGTAAAAAGCAATCTGTAAAAACATCTCCAGGCTTT GATTTTTGTACCATGGAAATTGTATTTAACCATACAGGGTTTTGGTATGTTTATATTGTTTACCTTAGTGATGTATTTGTTTAAGTGGCT AACATCCAAACGACTGTTTGAAGGCATCAGAGTAATCTTCAGTGTGGAATGTTAAATAACGCTTTTATACTGTATTTTGTACTATGATGT AACTCCCCTTCCTTATGGCTAGGCTACTGTAACACTTGCCTGTAATCAGTGAAGGGCTGTGCACCTTGTACTATTTCACAATGGGTTCTG CTGGACAGATAATGGGCCAGTGTTATTGAGGTGATCAAGATCTGTTCCACAGGGCTAATGCCACCATCTCCCCTCAAAATTTTGTAGAGG TTCTAAAAAGAAAGTGGTATGTTGTGTGATGATCAGCACTAAGTCCTGCATTCCTGTTAAAGCCACTTGGGTCATAAGAAGGGAGTAAAA AATGAAGTCTGACTAGAATTCTATTGCAGAGGCCAGTACATTTAGTATGGCATTGAGTTGTGATATAGTTTTACTTTGATGTGCATTTTG AATTTCAGCTACACCTAGATAGACGTAAAATGATAATTAAAATGCTGTAACCAACTTATCTAATAAAATTGGCAACCAGCCACTATTTTG TTGACTATGAGAAAGTTAAAAGTTTATGTTAATTTTTAGGGTCTGATAGAATATTTCATGTGTATTACAGTGGTATTCATATGCTATGTC >19903_19903_2_CSPG4-SON_CSPG4_chr15_75977076_ENST00000308508_SON_chr21_34945612_ENST00000356577_length(amino acids)=1614AA_BP=1483 MQSGPRPPLPAPGLALALTLTMLARLASAASFFGENHLEVPVATALTDIDLQLQFSTSQPEALLLLAAGPADHLLLQLYSGRLQVRLVLG QEELRLQTPAETLLSDSIPHTVVLTVVEGWATLSVDGFLNASSAVPGAPLEVPYGLFVGGTGTLGLPYLRGTSRPLRGCLHAATLNGRSL LRPLTPDVHEGCAEEFSASDDVALGFSGPHSLAAFPAWGTQDEGTLEFTLTTQSRQAPLAFQAGGRRGDFIYVDIFEGHLRAVVEKGQGT VLLHNSVPVADGQPHEVSVHINAHRLEISVDQYPTHTSNRGVLSYLEPRGSLLLGGLDAEASRHLQEHRLGLTPEATNASLLGCMEDLSV NGQRRGLREALLTRNMAAGCRLEEEEYEDDAYGHYEAFSTLAPEAWPAMELPEPCVPEPGLPPVFANFTQLLTISPLVVAEGGTAWLEWR HVQPTLDLMEAELRKSQVLFSVTRGARHGELELDIPGAQARKMFTLLDVVNRKARFIHDGSEDTSDQLVLEVSVTARVPMPSCLRRGQTY LLPIQVNPVNDPPHIIFPHGSLMVILEHTQKPLGPEVFQAYDPDSACEGLTFQVLGTSSGLPVERRDQPGEPATEFSCRELEAGSLVYVH RGGPAQDLTFRVSDGLQASPPATLKVVAIRPAIQIHRSTGLRLAQGSAMPILPANLSVETNAVGQDVSVLFRVTGALQFGELQKQGAGGV EGAEWWATQAFHQRDVEQGRVRYLSTDPQHHAYDTVENLALEVQVGQEILSNLSFPVTIQRATVWMLRLEPLHTQNTQQETLTTAHLEAT LEEAGPSPPTFHYEVVQAPRKGNLQLQGTRLSDGQGFTQDDIQAGRVTYGATARASEAVEDTFRFRVTAPPYFSPLYTFPIHIGGDPDAP VLTNVLLVVPEGGEGVLSADHLFVKSLNSASYLYEVMERPRHGRLAWRGTQDKTTMVTSFTNEDLLRGRLVYQHDDSETTEDDIPFVATR QGESSGDMAWEEVRGVFRVAIQPVNDHAPVQTISRIFHVARGGRRLLTTDDVAFSDADSGFADAQLVLTRKDLLFGSIVAVDEPTRPIYR FTQEDLRKRRVLFVHSGADRGWIQLQVSDGQHQATALLEVQASEPYLRVANGSSLVVPQGGQGTIDTAVLHLDTNLDIRSGDEVHYHVTA GPRWGQLVRAGQPATAFSQQDLLDGAVLYSHNGSLSPRDTMAFSVEAGPVHTDATLQVTIALEGPLAPLKLVRHKKIYVFQGEAAEIRRD QLEAAQEAVPPADIVFSVKSPPSAGYLVMVSRGALADEPPSLDPVQSFSQEAVDTGRVLYLHSRPEAWSDAFSLDVASGLGAPLEGVLVE LEVLPAAIPLEAQNFSVPEGGSLTLAPPLLRVSGPYFPTLLGLSLQVLEPPQHGALQKEDGPQARTLSAFSWRMVEEQLIRYVHDGSETL TDSFVLMANASEMDRQSHPVAFTVTVLPVNDQPPILTTNTGLQDQFLRAAPVTGGMGAVLMRKMGWREGEGLGKNKEGNKEPILVDFKTD -------------------------------------------------------------- >19903_19903_3_CSPG4-SON_CSPG4_chr15_75977076_ENST00000308508_SON_chr21_34945612_ENST00000381692_length(transcript)=5995nt_BP=4542nt GCGCCCAGGAGCAGAGCCGCGCTCGCTCCACTCAGCTCCCAGCTCCCAGGACTCCGCTGGCTCCTCGCAAGTCCTGCCGCCCAGCCCGCC GGGATGCAGTCCGGGCCGCGGCCCCCACTTCCAGCCCCCGGCCTGGCCTTGGCTTTGACCCTGACTATGTTGGCCAGACTTGCATCCGCG GCTTCCTTCTTCGGTGAGAACCACCTGGAGGTGCCTGTGGCCACGGCTCTGACCGACATAGACCTGCAGCTGCAGTTCTCCACGTCCCAG CCCGAAGCCCTCCTTCTCCTGGCAGCAGGCCCAGCTGACCACCTCCTGCTGCAGCTCTACTCTGGACGCCTGCAGGTCAGACTTGTTCTG GGCCAGGAGGAGCTGAGGCTGCAGACTCCAGCAGAGACGCTGCTGAGTGACTCCATCCCCCACACTGTGGTGCTGACTGTCGTAGAGGGC TGGGCCACGTTGTCAGTCGATGGGTTTCTGAACGCCTCCTCAGCAGTCCCAGGAGCCCCCCTAGAGGTCCCCTATGGGCTCTTTGTTGGG GGCACTGGGACCCTTGGCCTGCCCTACCTGAGGGGAACCAGCCGACCCCTGAGGGGTTGCCTCCATGCAGCCACCCTCAATGGCCGCAGC CTCCTCCGGCCTCTGACCCCCGATGTGCATGAGGGCTGTGCTGAAGAGTTTTCTGCCAGTGATGATGTGGCCCTGGGCTTCTCTGGGCCC CACTCTCTGGCTGCCTTCCCTGCCTGGGGCACTCAGGACGAAGGAACCCTAGAGTTTACACTCACCACACAGAGCCGGCAGGCACCCTTG GCCTTCCAGGCAGGGGGCCGGCGTGGGGACTTCATCTATGTGGACATATTTGAGGGCCACCTGCGGGCCGTGGTGGAGAAGGGCCAGGGT ACCGTATTGCTCCACAACAGTGTGCCTGTGGCCGATGGGCAGCCCCATGAGGTCAGTGTCCACATCAATGCTCACCGGCTGGAAATCTCC GTGGACCAGTACCCTACGCATACTTCGAACCGAGGAGTCCTCAGCTACCTGGAGCCACGGGGCAGTCTCCTTCTCGGGGGGCTGGATGCA GAGGCCTCTCGTCACCTCCAGGAACACCGCCTGGGCCTGACACCAGAGGCCACCAATGCCTCCCTGCTGGGCTGCATGGAAGACCTCAGT GTCAATGGCCAGAGGCGGGGGCTGCGGGAAGCTTTGCTGACGCGCAACATGGCAGCCGGCTGCAGGCTGGAGGAGGAGGAGTATGAGGAC GATGCCTATGGACATTATGAAGCTTTCTCCACCCTGGCCCCTGAGGCTTGGCCAGCCATGGAGCTGCCTGAGCCATGCGTGCCTGAGCCA GGGCTGCCTCCTGTCTTTGCCAATTTCACCCAGCTGCTGACTATCAGCCCACTGGTGGTGGCCGAGGGGGGCACAGCCTGGCTTGAGTGG AGGCATGTGCAGCCCACGCTGGACCTGATGGAGGCTGAGCTGCGCAAATCCCAGGTGCTGTTCAGCGTGACCCGAGGGGCACGCCATGGC GAGCTCGAGCTGGACATCCCGGGAGCCCAGGCACGAAAAATGTTCACCCTCCTGGACGTGGTGAACCGCAAGGCCCGCTTCATCCACGAT GGCTCTGAGGACACCTCCGACCAGCTGGTGCTGGAGGTGTCGGTGACGGCTCGGGTGCCCATGCCCTCATGCCTTCGGAGGGGCCAAACA TACCTCCTGCCCATCCAGGTCAACCCTGTCAATGACCCACCCCACATCATCTTCCCACATGGCAGCCTCATGGTGATCCTGGAACACACG CAGAAGCCGCTGGGGCCTGAGGTTTTCCAGGCCTATGACCCGGACTCTGCCTGTGAGGGCCTCACCTTCCAGGTCCTTGGCACCTCCTCT GGCCTCCCCGTGGAGCGCCGAGACCAGCCTGGGGAGCCGGCGACCGAGTTCTCCTGCCGGGAGTTGGAGGCCGGCAGCCTAGTCTATGTC CACCGCGGTGGTCCTGCACAGGACTTGACGTTCCGGGTCAGCGATGGACTGCAGGCCAGCCCCCCGGCCACGCTGAAGGTGGTGGCCATC CGGCCGGCCATACAGATCCACCGCAGCACAGGGTTGCGACTGGCCCAAGGCTCTGCCATGCCCATCTTGCCCGCCAACCTGTCGGTGGAG ACCAATGCCGTGGGGCAGGATGTGAGCGTGCTGTTCCGCGTCACTGGGGCCCTGCAGTTTGGGGAGCTGCAGAAGCAGGGGGCAGGTGGG GTGGAGGGTGCTGAGTGGTGGGCCACACAGGCGTTCCACCAGCGGGATGTGGAGCAGGGCCGCGTGAGGTACCTGAGCACTGACCCACAG CACCACGCTTACGACACCGTGGAGAACCTGGCCCTGGAGGTGCAGGTGGGCCAGGAGATCCTGAGCAATCTGTCCTTCCCAGTGACCATC CAGAGAGCCACTGTGTGGATGCTGCGGCTGGAGCCACTGCACACTCAGAACACCCAGCAGGAGACCCTCACCACAGCCCACCTGGAGGCC ACCCTGGAGGAGGCAGGCCCAAGCCCCCCAACCTTCCATTATGAGGTGGTTCAGGCTCCCAGGAAAGGCAACCTTCAACTACAGGGCACA AGGCTGTCAGATGGCCAGGGCTTCACCCAGGATGACATACAGGCTGGCCGGGTGACCTATGGGGCCACAGCACGTGCCTCAGAGGCAGTC GAGGACACCTTCCGTTTCCGTGTCACAGCTCCACCATATTTCTCCCCACTCTATACCTTCCCCATCCACATTGGTGGTGACCCAGATGCG CCTGTCCTCACCAATGTCCTCCTCGTGGTGCCTGAGGGTGGTGAGGGTGTCCTCTCTGCTGACCACCTCTTTGTCAAGAGTCTCAACAGT GCCAGCTACCTCTATGAGGTCATGGAGCGGCCCCGCCATGGGAGGTTGGCTTGGCGTGGGACACAGGACAAGACCACTATGGTGACATCC TTCACCAATGAAGACCTGTTGCGTGGCCGGCTGGTCTACCAGCATGATGACTCCGAGACCACAGAAGATGATATCCCATTTGTTGCTACC CGCCAGGGCGAGAGCAGTGGTGACATGGCCTGGGAGGAGGTACGGGGTGTCTTCCGAGTGGCCATCCAGCCCGTGAATGACCACGCCCCT GTGCAGACCATCAGCCGGATCTTCCATGTGGCCCGGGGTGGGCGGCGGCTGCTGACTACAGACGACGTGGCCTTCAGCGATGCTGACTCG GGCTTTGCTGACGCCCAGCTGGTGCTTACCCGCAAGGACCTCCTCTTTGGCAGTATCGTGGCCGTAGATGAGCCCACGCGGCCCATCTAC CGCTTCACCCAGGAGGACCTCAGGAAGAGGCGAGTACTGTTCGTGCACTCAGGGGCTGACCGTGGCTGGATCCAGCTGCAGGTGTCCGAC GGGCAACACCAGGCCACTGCGCTGCTGGAGGTGCAGGCCTCGGAACCCTACCTCCGTGTGGCCAACGGCTCCAGCCTTGTGGTCCCTCAA GGAGGCCAGGGCACCATCGACACGGCCGTGCTCCACCTGGACACCAACCTCGACATCCGCAGTGGGGATGAGGTCCACTACCACGTCACA GCTGGCCCTCGCTGGGGACAGCTAGTCCGGGCTGGTCAGCCAGCCACAGCCTTCTCCCAGCAGGACCTGCTGGATGGGGCCGTTCTCTAT AGCCACAATGGCAGCCTCAGCCCCCGCGACACCATGGCCTTCTCCGTGGAAGCAGGGCCAGTGCACACGGATGCCACCCTACAAGTGACC ATTGCCCTAGAGGGCCCACTGGCCCCACTGAAGCTGGTCCGGCACAAGAAGATCTACGTCTTCCAGGGAGAGGCAGCTGAGATCAGAAGG GACCAGCTGGAGGCAGCCCAGGAGGCAGTGCCACCTGCAGACATCGTATTCTCAGTGAAGAGCCCACCGAGTGCCGGCTACCTGGTGATG GTGTCGCGTGGCGCCTTGGCAGATGAGCCACCCAGCCTGGACCCTGTGCAGAGCTTCTCCCAGGAGGCAGTGGACACAGGCAGGGTCCTG TACCTGCACTCCCGCCCTGAGGCCTGGAGCGATGCCTTCTCGCTGGATGTGGCCTCAGGCCTGGGTGCTCCCCTCGAGGGCGTCCTTGTG GAGCTGGAGGTGCTGCCCGCTGCCATCCCACTAGAGGCGCAAAACTTCAGCGTCCCTGAGGGTGGCAGCCTCACCCTGGCCCCTCCACTG CTCCGTGTCTCCGGGCCCTACTTCCCCACTCTCCTGGGCCTCAGCCTGCAGGTGCTGGAGCCACCCCAGCATGGAGCCCTGCAGAAGGAG GACGGACCTCAAGCCAGGACCCTCAGCGCCTTCTCCTGGAGAATGGTGGAAGAGCAGCTGATCCGCTACGTGCATGACGGGAGCGAGACA CTGACAGACAGTTTTGTCCTGATGGCTAATGCCTCCGAGATGGATCGCCAGAGCCATCCTGTGGCCTTCACTGTCACTGTCCTGCCTGTC AATGACCAACCCCCCATCCTCACTACAAACACAGGCCTGCAGGATCAGTTCTTAAGAGCAGCCCCGGTAACTGGAGGAATGGGAGCCGTT TTGATGAGAAAAATGGGCTGGAGAGAAGGAGAAGGATTAGGAAAAAACAAAGAAGGCAATAAGGAACCCATCCTAGTTGATTTTAAGACA GACCGAAAAGGTCTTGTTGCAGTAGGAGAAAGAGCACAAAAGAGGTCTGGGAACTTCTCTGCTGCAATGAAAGATCTGTCAGGCAAACAT CCTGTGTCTGCTTTGATGGAGATCTGTAATAAAAGAAGGTGGCAACCACCTGAATTTCTATTGGTCCATGATAGTGGCCCTGATCATCGC AAACATTTTCTCTTTAGGGTATTGAGAAATGGAGCCCTTACCAGACCCAATTGTATGTTTTTCTTGAATAGGTATTGATAAATGGAAGCG CTTACCAGCCCAGCTTTGCCAGCCCTAATAAGAAGCATGCTAAAGCCACAGCAGCTACTGTGGTTCTTCAAGCAATGGGCCTTGTACCAA AGGACCTCATGGCTAATGCCACTTGCTTCAGGAGTGCCTCACGTAGATAGATTGAGGTTTTATAATAATCATTTCAGAATTTTACTCTGC ATCACAATGTATTTCCTCTTTAATGTTGTAAATATTTGGCAATTTAAGACATTGTGTAAAAAGCAATCTGTAAAAACATCTCCAGGCTTT GATTTTTGTACCATGGAAATTGTATTTAACCATACAGGGTTTTGGTATGTTTATATTGTTTACCTTAGTGATGTATTTGTTTAAGTGGCT AACATCCAAACGACTGTTTGAAGGCATCAGAGTAATCTTCAGTGTGGAATGTTAAATAACGCTTTTATACTGTATTTTGTACTATGATGT AACTCCCCTTCCTTATGGCTAGGCTACTGTAACACTTGCCTGTAATCAGTGAAGGGCTGTGCACCTTGTACTATTTCACAATGGGTTCTG CTGGACAGATAATGGGCCAGTGTTATTGAGGTGATCAAGATCTGTTCCACAGGGCTAATGCCACCATCTCCCCTCAAAATTTTGTAGAGG TTCTAAAAAGAAAGTGGTATGTTGTGTGATGATCAGCACTAAGTCCTGCATTCCTGTTAAAGCCACTTGGGTCATAAGAAGGGAGTAAAA AATGAAGTCTGACTAGAATTCTATTGCAGAGGCCAGTACATTTAGTATGGCATTGAGTTGTGATATAGTTTTACTTTGATGTGCATTTTG AATTTCAGCTACACCTAGATAGACGTAAAATGATAATTAAAATGCTGTAACCAACTTATCTAATAAAATTGGCAACCAGCCACTATTTTG TTGACTATGAGAAAGTTAAAAGTTTATGTTAATTTTTAGGGTCTGATAGAATATTTCATGTGTATTACAGTGGTATTCATATGCTATGTC >19903_19903_3_CSPG4-SON_CSPG4_chr15_75977076_ENST00000308508_SON_chr21_34945612_ENST00000381692_length(amino acids)=1614AA_BP=1483 MQSGPRPPLPAPGLALALTLTMLARLASAASFFGENHLEVPVATALTDIDLQLQFSTSQPEALLLLAAGPADHLLLQLYSGRLQVRLVLG QEELRLQTPAETLLSDSIPHTVVLTVVEGWATLSVDGFLNASSAVPGAPLEVPYGLFVGGTGTLGLPYLRGTSRPLRGCLHAATLNGRSL LRPLTPDVHEGCAEEFSASDDVALGFSGPHSLAAFPAWGTQDEGTLEFTLTTQSRQAPLAFQAGGRRGDFIYVDIFEGHLRAVVEKGQGT VLLHNSVPVADGQPHEVSVHINAHRLEISVDQYPTHTSNRGVLSYLEPRGSLLLGGLDAEASRHLQEHRLGLTPEATNASLLGCMEDLSV NGQRRGLREALLTRNMAAGCRLEEEEYEDDAYGHYEAFSTLAPEAWPAMELPEPCVPEPGLPPVFANFTQLLTISPLVVAEGGTAWLEWR HVQPTLDLMEAELRKSQVLFSVTRGARHGELELDIPGAQARKMFTLLDVVNRKARFIHDGSEDTSDQLVLEVSVTARVPMPSCLRRGQTY LLPIQVNPVNDPPHIIFPHGSLMVILEHTQKPLGPEVFQAYDPDSACEGLTFQVLGTSSGLPVERRDQPGEPATEFSCRELEAGSLVYVH RGGPAQDLTFRVSDGLQASPPATLKVVAIRPAIQIHRSTGLRLAQGSAMPILPANLSVETNAVGQDVSVLFRVTGALQFGELQKQGAGGV EGAEWWATQAFHQRDVEQGRVRYLSTDPQHHAYDTVENLALEVQVGQEILSNLSFPVTIQRATVWMLRLEPLHTQNTQQETLTTAHLEAT LEEAGPSPPTFHYEVVQAPRKGNLQLQGTRLSDGQGFTQDDIQAGRVTYGATARASEAVEDTFRFRVTAPPYFSPLYTFPIHIGGDPDAP VLTNVLLVVPEGGEGVLSADHLFVKSLNSASYLYEVMERPRHGRLAWRGTQDKTTMVTSFTNEDLLRGRLVYQHDDSETTEDDIPFVATR QGESSGDMAWEEVRGVFRVAIQPVNDHAPVQTISRIFHVARGGRRLLTTDDVAFSDADSGFADAQLVLTRKDLLFGSIVAVDEPTRPIYR FTQEDLRKRRVLFVHSGADRGWIQLQVSDGQHQATALLEVQASEPYLRVANGSSLVVPQGGQGTIDTAVLHLDTNLDIRSGDEVHYHVTA GPRWGQLVRAGQPATAFSQQDLLDGAVLYSHNGSLSPRDTMAFSVEAGPVHTDATLQVTIALEGPLAPLKLVRHKKIYVFQGEAAEIRRD QLEAAQEAVPPADIVFSVKSPPSAGYLVMVSRGALADEPPSLDPVQSFSQEAVDTGRVLYLHSRPEAWSDAFSLDVASGLGAPLEGVLVE LEVLPAAIPLEAQNFSVPEGGSLTLAPPLLRVSGPYFPTLLGLSLQVLEPPQHGALQKEDGPQARTLSAFSWRMVEEQLIRYVHDGSETL TDSFVLMANASEMDRQSHPVAFTVTVLPVNDQPPILTTNTGLQDQFLRAAPVTGGMGAVLMRKMGWREGEGLGKNKEGNKEPILVDFKTD -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for CSPG4-SON |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 631_1446 | 1483.0 | 2323.0 | COL5A1 |
Hgene | CSPG4 | chr15:75977076 | chr21:34945612 | ENST00000308508 | - | 5 | 10 | 574_1040 | 1483.0 | 2323.0 | COL6A2 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for CSPG4-SON |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for CSPG4-SON |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | CSPG4 | C2239176 | Liver carcinoma | 1 | CTD_human |
Tgene | C4310696 | Zhu-Tokita-Takenouchi-Kim syndrome | 4 | CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT | |
Tgene | C0010606 | Adenoid Cystic Carcinoma | 1 | CTD_human | |
Tgene | C0036095 | Salivary Gland Neoplasms | 1 | CTD_human | |
Tgene | C0220636 | Malignant neoplasm of salivary gland | 1 | CTD_human |