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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:CCDC24-ST3GAL3 (FusionGDB2 ID:HG149473TG6487)

Fusion Gene Summary for CCDC24-ST3GAL3

check button Fusion gene summary
Fusion gene informationFusion gene name: CCDC24-ST3GAL3
Fusion gene ID: hg149473tg6487
HgeneTgene
Gene symbol

CCDC24

ST3GAL3

Gene ID

149473

6487

Gene namecoiled-coil domain containing 24ST3 beta-galactoside alpha-2,3-sialyltransferase 3
Synonyms-EIEE15|MRT12|SIAT6|ST3GALII|ST3Gal III|ST3GalIII|ST3N
Cytomap('CCDC24')('ST3GAL3')

1p34.1

1p34.1

Type of geneprotein-codingprotein-coding
Descriptioncoiled-coil domain-containing protein 24CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferaseGal beta-1,3(4)GlcNAc alpha-2,3 sialyltransferasealpha 2,3-ST 3alpha 2,3-sialyltransferase IIIalpha-2,3-sialyltransferase IIsialyltransferase 6 (N-acetyllacosaminide alpha 2,3-si
Modification date2020032020200313
UniProtAcc

Q8N4L8

.
Ensembl transtripts involved in fusion geneENST00000479055, ENST00000372318, 
Fusion gene scores* DoF score1 X 2 X 1=213 X 15 X 10=1950
# samples 115
** MAII scorelog2(1/2*10)=2.32192809488736log2(15/1950*10)=-3.70043971814109
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: CCDC24 [Title/Abstract] AND ST3GAL3 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointCCDC24(44459636)-ST3GAL3(44290403), # samples:1
CCDC24(44457676)-ST3GAL3(44201904), # samples:1
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check buttonFusion gene breakpoints across CCDC24 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure
check buttonFusion gene breakpoints across ST3GAL3 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4CESCTCGA-ZJ-AAXN-01ACCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
ChimerDB4CESCTCGA-ZJ-AAXN-01ACCDC24chr1

44459636

+ST3GAL3chr1

44290403

+


Top

Fusion Gene ORF analysis for CCDC24-ST3GAL3

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
3UTR-3CDSENST00000479055ENST00000262915CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-3CDSENST00000479055ENST00000351035CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-3CDSENST00000479055ENST00000372375CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000330208CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000332628CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000335430CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000347631CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000353126CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000361392CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000361400CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000361746CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000361812CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000372362CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000372365CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000372366CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000372367CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000372368CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000372369CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000372372CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000372374CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000372377CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000461375CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000528371CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000531451CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000531816CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000531993CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000533933CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
3UTR-intronENST00000479055ENST00000545417CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-5UTRENST00000372318ENST00000262915CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-5UTRENST00000372318ENST00000330208CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-5UTRENST00000372318ENST00000335430CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-5UTRENST00000372318ENST00000347631CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-5UTRENST00000372318ENST00000351035CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-5UTRENST00000372318ENST00000353126CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-5UTRENST00000372318ENST00000361392CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-5UTRENST00000372318ENST00000361400CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-5UTRENST00000372318ENST00000372374CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-5UTRENST00000372318ENST00000372375CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-5UTRENST00000372318ENST00000372377CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-5UTRENST00000372318ENST00000545417CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-intronENST00000372318ENST00000330208CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000332628CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-intronENST00000372318ENST00000332628CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000335430CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000347631CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000353126CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000361392CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000361400CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000361746CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-intronENST00000372318ENST00000361746CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000361812CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-intronENST00000372318ENST00000361812CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000372362CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-intronENST00000372318ENST00000372362CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000372365CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-intronENST00000372318ENST00000372365CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000372366CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-intronENST00000372318ENST00000372366CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000372367CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-intronENST00000372318ENST00000372367CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000372368CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-intronENST00000372318ENST00000372368CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000372369CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-intronENST00000372318ENST00000372369CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000372372CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-intronENST00000372318ENST00000372372CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000372374CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000372377CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000461375CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-intronENST00000372318ENST00000461375CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000528371CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-intronENST00000372318ENST00000528371CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000531451CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-intronENST00000372318ENST00000531451CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000531816CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-intronENST00000372318ENST00000531816CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000531993CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-intronENST00000372318ENST00000531993CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000533933CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
5CDS-intronENST00000372318ENST00000533933CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
5CDS-intronENST00000372318ENST00000545417CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
In-frameENST00000372318ENST00000262915CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
In-frameENST00000372318ENST00000351035CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
In-frameENST00000372318ENST00000372375CCDC24chr1

44459636

+ST3GAL3chr1

44290403

+
intron-5UTRENST00000479055ENST00000262915CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-5UTRENST00000479055ENST00000330208CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-5UTRENST00000479055ENST00000335430CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-5UTRENST00000479055ENST00000347631CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-5UTRENST00000479055ENST00000351035CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-5UTRENST00000479055ENST00000353126CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-5UTRENST00000479055ENST00000361392CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-5UTRENST00000479055ENST00000361400CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-5UTRENST00000479055ENST00000372374CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-5UTRENST00000479055ENST00000372375CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-5UTRENST00000479055ENST00000372377CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-5UTRENST00000479055ENST00000545417CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-intronENST00000479055ENST00000332628CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-intronENST00000479055ENST00000361746CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-intronENST00000479055ENST00000361812CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-intronENST00000479055ENST00000372362CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-intronENST00000479055ENST00000372365CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-intronENST00000479055ENST00000372366CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-intronENST00000479055ENST00000372367CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-intronENST00000479055ENST00000372368CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-intronENST00000479055ENST00000372369CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-intronENST00000479055ENST00000372372CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-intronENST00000479055ENST00000461375CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-intronENST00000479055ENST00000528371CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-intronENST00000479055ENST00000531451CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-intronENST00000479055ENST00000531816CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-intronENST00000479055ENST00000531993CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+
intron-intronENST00000479055ENST00000533933CCDC24chr1

44457676

-ST3GAL3chr1

44201904

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000372318CCDC24chr144459636+ENST00000262915ST3GAL3chr144290403+268666891748579
ENST00000372318CCDC24chr144459636+ENST00000372375ST3GAL3chr144290403+268666891748579
ENST00000372318CCDC24chr144459636+ENST00000351035ST3GAL3chr144290403+268666891748579

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000372318ENST00000262915CCDC24chr144459636+ST3GAL3chr144290403+0.0242033270.9757967
ENST00000372318ENST00000372375CCDC24chr144459636+ST3GAL3chr144290403+0.0242033270.9757967
ENST00000372318ENST00000351035CCDC24chr144459636+ST3GAL3chr144290403+0.0242033270.9757967

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Fusion Genomic Features for CCDC24-ST3GAL3


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
CCDC24chr144459636+ST3GAL3chr144290402+5.13E-050.99994874
CCDC24chr144459636+ST3GAL3chr144290402+5.13E-050.99994874

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.
genomic feature of top 1%

Top

Fusion Protein Features for CCDC24-ST3GAL3


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr1:44459636/chr1:44290403)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
CCDC24

Q8N4L8

.
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000330208071_80156.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003302080729_3750156.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003326280101_80345.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST0000033262801029_3750345.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003354300101_80522.3333333333334Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST0000033543001029_3750522.3333333333334Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003476310121_80391.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST0000034763101229_3750391.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003531260101_80278.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST0000035312601029_3750278.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003613920121_80376.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST0000036139201229_3750376.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003614000111_80360.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST0000036140001129_3750360.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000361812061_80171.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003618120629_3750171.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000372362061_80156.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003723620629_3750156.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000372365081_80177.66666666666666Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003723650829_3750177.66666666666666Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000372366071_80161.66666666666666Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003723660729_3750161.66666666666666Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000372367071_80202.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003723670729_3750202.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003723690111_80346.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST0000037236901129_3750346.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003723740111_80345.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST0000037237401129_3750345.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000372377091_80445.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003723770929_3750445.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000528371071_80187.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST000005283710729_3750187.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000531451051_80140.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST000005314510529_3750140.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000531816041_80102.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST000005318160429_3750102.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000531993081_80262.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST000005319930829_3750262.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000533933091_80278.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST000005339330929_3750278.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000545417071_80171.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST000005454170729_3750171.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000330208079_280156.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003326280109_280345.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003354300109_280522.3333333333334TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003476310129_280391.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003531260109_280278.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003613920129_280376.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003614000119_280360.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000361812069_280171.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000372362069_280156.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000372365089_280177.66666666666666TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000372366079_280161.66666666666666TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000372367079_280202.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003723690119_280346.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003723740119_280345.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000372377099_280445.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000528371079_280187.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000531451059_280140.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000531816049_280102.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000531993089_280262.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000533933099_280278.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST00000545417079_280171.0TransmembraneHelical%3B Signal-anchor for type II membrane protein

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneCCDC24chr1:44459636chr1:44290403ENST00000372318+59168_225165308.0Coiled coilOntology_term=ECO:0000255
TgeneST3GAL3chr1:44459636chr1:44290403ENST000002629153131_884445.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST0000026291531329_37584445.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003510352121_853414.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST0000035103521229_37553414.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003617462121_884445.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST0000036174621229_37584445.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003723682121_869430.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST0000037236821229_37569430.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003723721111_853414.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST0000037237211129_37553414.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003723753131_869430.0Topological domainCytoplasmic
TgeneST3GAL3chr1:44459636chr1:44290403ENST0000037237531329_37569430.0Topological domainLumenal
TgeneST3GAL3chr1:44459636chr1:44290403ENST000002629153139_2884445.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003510352129_2853414.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003617462129_2884445.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003723682129_2869430.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003723721119_2853414.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneST3GAL3chr1:44459636chr1:44290403ENST000003723753139_2869430.0TransmembraneHelical%3B Signal-anchor for type II membrane protein


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Fusion Gene Sequence for CCDC24-ST3GAL3


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>13759_13759_1_CCDC24-ST3GAL3_CCDC24_chr1_44459636_ENST00000372318_ST3GAL3_chr1_44290403_ENST00000262915_length(transcript)=2686nt_BP=668nt
GCTAGGGCCCTGGTTCCCACTGCCTGGTTTCTGGGCCCCCGGCATCCGAGTCGGCCAAAAGCCGGGCAGAAGAGAGCGCCAAGGACTGGC
AGTTCCGGAACGGGCAATCCCAGCCGAGGGGACCAGCGGCAGAGCACGGGTCCGAGCCGGGGACGGCGGCGTCGGTGGGTCATGCTCCGG
CACTCCCCCTCGCTGTGGGAGCTGGTGGAGGAGCACGTTCCGCTCCGGGAGCGACGCGAAGTGAAGAGGATTCTGGGGGAGGCGGCGGTG
GACCTGAGCCTGGAGCTGCGGGCGGAGGTGGCGATGTTACGGGCACTGCTCCAAGAGGCTCGATCCTCTCAAGCCCCCAGCTCCCGCCCC
ATCTCTGACCCCTCTTCTCTTCTGGCACCACCGCCTCTCCTAAAGGACCTCTTGCGCCAGGAGCTCCGGCAGTTGCTCCAGGGTCTCCGC
CACAAAGCCATCTGTGAGGGCAGGGACCAGGCCCAAGCTTGGGTCCAGTATAGCCCCAGGGTCCTGCACTTTGCCTTGGAGGAGCCCAGG
TGTGATTTGCCAGAACAGGAGATATTCCAGATGAGAGGTGGTGGGCCCAGCAGCGGTCACAGAGATCTCAGCATCATCAAGGACCAACTG
AACGTGTCCAACATTGACCAGGTGGCCAGACACCTGAGCTCACCGAGGACTCTCTGCACGGTGGTTTTTGGCCTTGACTGCATATTGGAA
TCACCTGGAGAGCCTAAAAAATTACTGATGCCTGCATCCCACCCTCTAGAGATTTTGAAGTCACTGAGCGAGGACACAGCCTTTGCATTA
GGATTTTTAAAGCTGCCCAGGCCTGCTGAATTAGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTTGCAAGCCTGGCTATGCTTCAGCC
TTGATGACGGCCATCTTCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTC
GTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGAC
AGCCTCCGCTGCCGCCGCTGCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATT
GTGGTGAGACTGAATTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGCGCC
ATGCAGCGGCCTGAGCAGTACGAGCGCGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAAGTGGTTGAAATACATCGTC
TACAAGGAGAGAGTGAGTGCATCGGATGGCTTCTGGAAATCTGTGGCCACTCGAGTGCCCAAGGAGCCCCCTGAGATTCGAATCCTCAAC
CCATATTTCATCCAGGAGGCCGCCTTCACCCTCATTGGCCTGCCCTTCAACAATGGCCTCATGGGCCGGGGGAACATCCCTACCCTTGGC
AGTGTGGCAGTGACCATGGCACTACACGGCTGTGACGAGGTGGCAGTCGCAGGATTTGGCTATGACATGAGCACACCCAACGCACCCCTG
CACTACTATGAGACCGTTCGCATGGCAGCCATCAAAGAGTCCTGGACGCACAATATCCAGCGAGAGAAAGAGTTTCTGCGGAAGCTGGTG
AAAGCTCGCGTCATCACTGATCTAAGCAGTGGCATCTGAGTGGGCCCAGCACATGGCCATAGAGGCCCAGGCACCACCAGGAGCAGCAGC
CAGCACCACCTACACAGGAGTCTTCAGACCCAGAGAAGGACGGTGCCAAGGGCCCCAGGGGCAGCAAGGCCTTGGTGGAGCAGCCAGAGC
TGTGCCTGCTCAGCAGCCAGTCTCAGAGACCAGCACTCAGCCTCATTCAGCATGGGTCCTTGATGCCAGAGGGCCAGCAGGCTCCTGGCT
GTGCCCAGCAGGCCCAGCATGCAGGTGGTGGGACACTGGGCAGCAAGGCTGCTGCCGGAATCACTTCTCCAATCAGTGTTTGGTGTATTA
TCATTTTGTGAATTTGGGTAGGGGGGAGGGTAGGGATAATTTATTTTTAAATAAGGTTGGAGATGTCAAGTTGGGTTCACTTGCCATGCA
GGAAGAGGCCCACTAGAGGGCCCATCAGGCAGTGTTACCTGTTAGCTCCCTGTGGGGCAGGAGTGCCAGGACCAGCCTGTACCTTGCTGT
GGGGCTACAGGATGGTGGGCAGGATCTCAAGCCAGCCCCCTCCAGCTCATGACACTGTTTGGCCTTTCTTGGGGAGAAGGCGGGGTATTC
CCACTCACCAGCCCTAGCTGTCCCATGGGGAAACCCTGGAGCCATCCCTTCGGAGCCAACAAGACCGCCCCAGGGCTATAGCAGAAAGAA
CTTTAAAGCTCAGGAGGGTGACGCCCAGCTCCGCCTGCTGGGAAGAGCTCCCCTCCACAGCTGCAGCTGATCCATAGGACTACCGCAGGC
CCGGACTCACCAACTTGCCACATGTTCTAGGTTTCAGCAACAAGACTGCCAGGTGGTTGGGTTCTGCCTTTAGCCTGGACCAAAGGGAAG

>13759_13759_1_CCDC24-ST3GAL3_CCDC24_chr1_44459636_ENST00000372318_ST3GAL3_chr1_44290403_ENST00000262915_length(amino acids)=579AA_BP=219
MVPTAWFLGPRHPSRPKAGQKRAPRTGSSGTGNPSRGDQRQSTGPSRGRRRRWVMLRHSPSLWELVEEHVPLRERREVKRILGEAAVDLS
LELRAEVAMLRALLQEARSSQAPSSRPISDPSSLLAPPPLLKDLLRQELRQLLQGLRHKAICEGRDQAQAWVQYSPRVLHFALEEPRCDL
PEQEIFQMRGGGPSSGHRDLSIIKDQLNVSNIDQVARHLSSPRTLCTVVFGLDCILESPGEPKKLLMPASHPLEILKSLSEDTAFALGFL
KLPRPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARIREFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLR
CRRCIIVGNGGVLANKSLGSRIDDYDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVYKE
RVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYY

--------------------------------------------------------------
>13759_13759_2_CCDC24-ST3GAL3_CCDC24_chr1_44459636_ENST00000372318_ST3GAL3_chr1_44290403_ENST00000351035_length(transcript)=2686nt_BP=668nt
GCTAGGGCCCTGGTTCCCACTGCCTGGTTTCTGGGCCCCCGGCATCCGAGTCGGCCAAAAGCCGGGCAGAAGAGAGCGCCAAGGACTGGC
AGTTCCGGAACGGGCAATCCCAGCCGAGGGGACCAGCGGCAGAGCACGGGTCCGAGCCGGGGACGGCGGCGTCGGTGGGTCATGCTCCGG
CACTCCCCCTCGCTGTGGGAGCTGGTGGAGGAGCACGTTCCGCTCCGGGAGCGACGCGAAGTGAAGAGGATTCTGGGGGAGGCGGCGGTG
GACCTGAGCCTGGAGCTGCGGGCGGAGGTGGCGATGTTACGGGCACTGCTCCAAGAGGCTCGATCCTCTCAAGCCCCCAGCTCCCGCCCC
ATCTCTGACCCCTCTTCTCTTCTGGCACCACCGCCTCTCCTAAAGGACCTCTTGCGCCAGGAGCTCCGGCAGTTGCTCCAGGGTCTCCGC
CACAAAGCCATCTGTGAGGGCAGGGACCAGGCCCAAGCTTGGGTCCAGTATAGCCCCAGGGTCCTGCACTTTGCCTTGGAGGAGCCCAGG
TGTGATTTGCCAGAACAGGAGATATTCCAGATGAGAGGTGGTGGGCCCAGCAGCGGTCACAGAGATCTCAGCATCATCAAGGACCAACTG
AACGTGTCCAACATTGACCAGGTGGCCAGACACCTGAGCTCACCGAGGACTCTCTGCACGGTGGTTTTTGGCCTTGACTGCATATTGGAA
TCACCTGGAGAGCCTAAAAAATTACTGATGCCTGCATCCCACCCTCTAGAGATTTTGAAGTCACTGAGCGAGGACACAGCCTTTGCATTA
GGATTTTTAAAGCTGCCCAGGCCTGCTGAATTAGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTTGCAAGCCTGGCTATGCTTCAGCC
TTGATGACGGCCATCTTCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTC
GTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGAC
AGCCTCCGCTGCCGCCGCTGCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATT
GTGGTGAGACTGAATTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGCGCC
ATGCAGCGGCCTGAGCAGTACGAGCGCGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAAGTGGTTGAAATACATCGTC
TACAAGGAGAGAGTGAGTGCATCGGATGGCTTCTGGAAATCTGTGGCCACTCGAGTGCCCAAGGAGCCCCCTGAGATTCGAATCCTCAAC
CCATATTTCATCCAGGAGGCCGCCTTCACCCTCATTGGCCTGCCCTTCAACAATGGCCTCATGGGCCGGGGGAACATCCCTACCCTTGGC
AGTGTGGCAGTGACCATGGCACTACACGGCTGTGACGAGGTGGCAGTCGCAGGATTTGGCTATGACATGAGCACACCCAACGCACCCCTG
CACTACTATGAGACCGTTCGCATGGCAGCCATCAAAGAGTCCTGGACGCACAATATCCAGCGAGAGAAAGAGTTTCTGCGGAAGCTGGTG
AAAGCTCGCGTCATCACTGATCTAAGCAGTGGCATCTGAGTGGGCCCAGCACATGGCCATAGAGGCCCAGGCACCACCAGGAGCAGCAGC
CAGCACCACCTACACAGGAGTCTTCAGACCCAGAGAAGGACGGTGCCAAGGGCCCCAGGGGCAGCAAGGCCTTGGTGGAGCAGCCAGAGC
TGTGCCTGCTCAGCAGCCAGTCTCAGAGACCAGCACTCAGCCTCATTCAGCATGGGTCCTTGATGCCAGAGGGCCAGCAGGCTCCTGGCT
GTGCCCAGCAGGCCCAGCATGCAGGTGGTGGGACACTGGGCAGCAAGGCTGCTGCCGGAATCACTTCTCCAATCAGTGTTTGGTGTATTA
TCATTTTGTGAATTTGGGTAGGGGGGAGGGTAGGGATAATTTATTTTTAAATAAGGTTGGAGATGTCAAGTTGGGTTCACTTGCCATGCA
GGAAGAGGCCCACTAGAGGGCCCATCAGGCAGTGTTACCTGTTAGCTCCCTGTGGGGCAGGAGTGCCAGGACCAGCCTGTACCTTGCTGT
GGGGCTACAGGATGGTGGGCAGGATCTCAAGCCAGCCCCCTCCAGCTCATGACACTGTTTGGCCTTTCTTGGGGAGAAGGCGGGGTATTC
CCACTCACCAGCCCTAGCTGTCCCATGGGGAAACCCTGGAGCCATCCCTTCGGAGCCAACAAGACCGCCCCAGGGCTATAGCAGAAAGAA
CTTTAAAGCTCAGGAGGGTGACGCCCAGCTCCGCCTGCTGGGAAGAGCTCCCCTCCACAGCTGCAGCTGATCCATAGGACTACCGCAGGC
CCGGACTCACCAACTTGCCACATGTTCTAGGTTTCAGCAACAAGACTGCCAGGTGGTTGGGTTCTGCCTTTAGCCTGGACCAAAGGGAAG

>13759_13759_2_CCDC24-ST3GAL3_CCDC24_chr1_44459636_ENST00000372318_ST3GAL3_chr1_44290403_ENST00000351035_length(amino acids)=579AA_BP=219
MVPTAWFLGPRHPSRPKAGQKRAPRTGSSGTGNPSRGDQRQSTGPSRGRRRRWVMLRHSPSLWELVEEHVPLRERREVKRILGEAAVDLS
LELRAEVAMLRALLQEARSSQAPSSRPISDPSSLLAPPPLLKDLLRQELRQLLQGLRHKAICEGRDQAQAWVQYSPRVLHFALEEPRCDL
PEQEIFQMRGGGPSSGHRDLSIIKDQLNVSNIDQVARHLSSPRTLCTVVFGLDCILESPGEPKKLLMPASHPLEILKSLSEDTAFALGFL
KLPRPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARIREFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLR
CRRCIIVGNGGVLANKSLGSRIDDYDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVYKE
RVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYY

--------------------------------------------------------------
>13759_13759_3_CCDC24-ST3GAL3_CCDC24_chr1_44459636_ENST00000372318_ST3GAL3_chr1_44290403_ENST00000372375_length(transcript)=2686nt_BP=668nt
GCTAGGGCCCTGGTTCCCACTGCCTGGTTTCTGGGCCCCCGGCATCCGAGTCGGCCAAAAGCCGGGCAGAAGAGAGCGCCAAGGACTGGC
AGTTCCGGAACGGGCAATCCCAGCCGAGGGGACCAGCGGCAGAGCACGGGTCCGAGCCGGGGACGGCGGCGTCGGTGGGTCATGCTCCGG
CACTCCCCCTCGCTGTGGGAGCTGGTGGAGGAGCACGTTCCGCTCCGGGAGCGACGCGAAGTGAAGAGGATTCTGGGGGAGGCGGCGGTG
GACCTGAGCCTGGAGCTGCGGGCGGAGGTGGCGATGTTACGGGCACTGCTCCAAGAGGCTCGATCCTCTCAAGCCCCCAGCTCCCGCCCC
ATCTCTGACCCCTCTTCTCTTCTGGCACCACCGCCTCTCCTAAAGGACCTCTTGCGCCAGGAGCTCCGGCAGTTGCTCCAGGGTCTCCGC
CACAAAGCCATCTGTGAGGGCAGGGACCAGGCCCAAGCTTGGGTCCAGTATAGCCCCAGGGTCCTGCACTTTGCCTTGGAGGAGCCCAGG
TGTGATTTGCCAGAACAGGAGATATTCCAGATGAGAGGTGGTGGGCCCAGCAGCGGTCACAGAGATCTCAGCATCATCAAGGACCAACTG
AACGTGTCCAACATTGACCAGGTGGCCAGACACCTGAGCTCACCGAGGACTCTCTGCACGGTGGTTTTTGGCCTTGACTGCATATTGGAA
TCACCTGGAGAGCCTAAAAAATTACTGATGCCTGCATCCCACCCTCTAGAGATTTTGAAGTCACTGAGCGAGGACACAGCCTTTGCATTA
GGATTTTTAAAGCTGCCCAGGCCTGCTGAATTAGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTTGCAAGCCTGGCTATGCTTCAGCC
TTGATGACGGCCATCTTCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTC
GTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGAC
AGCCTCCGCTGCCGCCGCTGCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATT
GTGGTGAGACTGAATTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGCGCC
ATGCAGCGGCCTGAGCAGTACGAGCGCGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAAGTGGTTGAAATACATCGTC
TACAAGGAGAGAGTGAGTGCATCGGATGGCTTCTGGAAATCTGTGGCCACTCGAGTGCCCAAGGAGCCCCCTGAGATTCGAATCCTCAAC
CCATATTTCATCCAGGAGGCCGCCTTCACCCTCATTGGCCTGCCCTTCAACAATGGCCTCATGGGCCGGGGGAACATCCCTACCCTTGGC
AGTGTGGCAGTGACCATGGCACTACACGGCTGTGACGAGGTGGCAGTCGCAGGATTTGGCTATGACATGAGCACACCCAACGCACCCCTG
CACTACTATGAGACCGTTCGCATGGCAGCCATCAAAGAGTCCTGGACGCACAATATCCAGCGAGAGAAAGAGTTTCTGCGGAAGCTGGTG
AAAGCTCGCGTCATCACTGATCTAAGCAGTGGCATCTGAGTGGGCCCAGCACATGGCCATAGAGGCCCAGGCACCACCAGGAGCAGCAGC
CAGCACCACCTACACAGGAGTCTTCAGACCCAGAGAAGGACGGTGCCAAGGGCCCCAGGGGCAGCAAGGCCTTGGTGGAGCAGCCAGAGC
TGTGCCTGCTCAGCAGCCAGTCTCAGAGACCAGCACTCAGCCTCATTCAGCATGGGTCCTTGATGCCAGAGGGCCAGCAGGCTCCTGGCT
GTGCCCAGCAGGCCCAGCATGCAGGTGGTGGGACACTGGGCAGCAAGGCTGCTGCCGGAATCACTTCTCCAATCAGTGTTTGGTGTATTA
TCATTTTGTGAATTTGGGTAGGGGGGAGGGTAGGGATAATTTATTTTTAAATAAGGTTGGAGATGTCAAGTTGGGTTCACTTGCCATGCA
GGAAGAGGCCCACTAGAGGGCCCATCAGGCAGTGTTACCTGTTAGCTCCCTGTGGGGCAGGAGTGCCAGGACCAGCCTGTACCTTGCTGT
GGGGCTACAGGATGGTGGGCAGGATCTCAAGCCAGCCCCCTCCAGCTCATGACACTGTTTGGCCTTTCTTGGGGAGAAGGCGGGGTATTC
CCACTCACCAGCCCTAGCTGTCCCATGGGGAAACCCTGGAGCCATCCCTTCGGAGCCAACAAGACCGCCCCAGGGCTATAGCAGAAAGAA
CTTTAAAGCTCAGGAGGGTGACGCCCAGCTCCGCCTGCTGGGAAGAGCTCCCCTCCACAGCTGCAGCTGATCCATAGGACTACCGCAGGC
CCGGACTCACCAACTTGCCACATGTTCTAGGTTTCAGCAACAAGACTGCCAGGTGGTTGGGTTCTGCCTTTAGCCTGGACCAAAGGGAAG

>13759_13759_3_CCDC24-ST3GAL3_CCDC24_chr1_44459636_ENST00000372318_ST3GAL3_chr1_44290403_ENST00000372375_length(amino acids)=579AA_BP=219
MVPTAWFLGPRHPSRPKAGQKRAPRTGSSGTGNPSRGDQRQSTGPSRGRRRRWVMLRHSPSLWELVEEHVPLRERREVKRILGEAAVDLS
LELRAEVAMLRALLQEARSSQAPSSRPISDPSSLLAPPPLLKDLLRQELRQLLQGLRHKAICEGRDQAQAWVQYSPRVLHFALEEPRCDL
PEQEIFQMRGGGPSSGHRDLSIIKDQLNVSNIDQVARHLSSPRTLCTVVFGLDCILESPGEPKKLLMPASHPLEILKSLSEDTAFALGFL
KLPRPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARIREFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLR
CRRCIIVGNGGVLANKSLGSRIDDYDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVYKE
RVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYY

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Fusion Gene PPI Analysis for CCDC24-ST3GAL3


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for CCDC24-ST3GAL3


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for CCDC24-ST3GAL3


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
TgeneC1970200MENTAL RETARDATION, AUTOSOMAL RECESSIVE 122CTD_human;GENOMICS_ENGLAND;UNIPROT
TgeneC3554316EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 152GENOMICS_ENGLAND;UNIPROT
TgeneC0037769West Syndrome1ORPHANET
TgeneC3714756Intellectual Disability1GENOMICS_ENGLAND