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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:AKT1-VDAC1 (FusionGDB2 ID:HG207TG7416) |
Fusion Gene Summary for AKT1-VDAC1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: AKT1-VDAC1 | Fusion gene ID: hg207tg7416 | Hgene | Tgene | Gene symbol | AKT1 | VDAC1 | Gene ID | 207 | 7416 |
Gene name | AKT serine/threonine kinase 1 | voltage dependent anion channel 1 | |
Synonyms | AKT|CWS6|PKB|PKB-ALPHA|PRKBA|RAC|RAC-ALPHA | PORIN|VDAC-1 | |
Cytomap | ('AKT1')('VDAC1') 14q32.33 | 5q31.1 | |
Type of gene | protein-coding | protein-coding | |
Description | RAC-alpha serine/threonine-protein kinaseAKT1mPKB alphaRAC-PK-alphaprotein kinase B alphaproto-oncogene c-Aktrac protein kinase alphaserine-threonine protein kinasev-akt murine thymoma viral oncogene homolog 1v-akt murine thymoma viral oncogene-l | voltage-dependent anion-selective channel protein 1outer mitochondrial membrane protein porin 1plasmalemmal porinporin 31HLporin 31HMsperm binding protein 1a | |
Modification date | 20200329 | 20200327 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000349310, ENST00000402615, ENST00000407796, ENST00000554581, ENST00000544168, ENST00000554192, ENST00000554585, ENST00000554848, ENST00000555458, ENST00000555528, | ||
Fusion gene scores | * DoF score | 10 X 6 X 4=240 | 8 X 5 X 6=240 |
# samples | 10 | 9 | |
** MAII score | log2(10/240*10)=-1.26303440583379 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(9/240*10)=-1.41503749927884 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: AKT1 [Title/Abstract] AND VDAC1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | AKT1(105235686)-VDAC1(133387399), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | AKT1 | GO:0001934 | positive regulation of protein phosphorylation | 19057511 |
Hgene | AKT1 | GO:0006468 | protein phosphorylation | 11994271|14749367|23431171 |
Hgene | AKT1 | GO:0007173 | epidermal growth factor receptor signaling pathway | 20878056 |
Hgene | AKT1 | GO:0016310 | phosphorylation | 20333297 |
Hgene | AKT1 | GO:0018105 | peptidyl-serine phosphorylation | 16139227 |
Hgene | AKT1 | GO:0018107 | peptidyl-threonine phosphorylation | 20605787 |
Hgene | AKT1 | GO:0030307 | positive regulation of cell growth | 19203586 |
Hgene | AKT1 | GO:0032079 | positive regulation of endodeoxyribonuclease activity | 20605787 |
Hgene | AKT1 | GO:0033138 | positive regulation of peptidyl-serine phosphorylation | 19667065 |
Hgene | AKT1 | GO:0035556 | intracellular signal transduction | 14749367 |
Hgene | AKT1 | GO:0035655 | interleukin-18-mediated signaling pathway | 21321938 |
Hgene | AKT1 | GO:0043066 | negative regulation of apoptotic process | 19203586 |
Hgene | AKT1 | GO:0043536 | positive regulation of blood vessel endothelial cell migration | 20011604 |
Hgene | AKT1 | GO:0048661 | positive regulation of smooth muscle cell proliferation | 21321938 |
Hgene | AKT1 | GO:0051091 | positive regulation of DNA-binding transcription factor activity | 19057511 |
Hgene | AKT1 | GO:0070141 | response to UV-A | 18483258 |
Tgene | VDAC1 | GO:0006820 | anion transport | 8420959 |
Tgene | VDAC1 | GO:0006915 | apoptotic process | 25296756 |
Fusion gene information * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
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Fusion Gene ORF analysis for AKT1-VDAC1 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
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Fusion Genomic Features for AKT1-VDAC1 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
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Fusion Protein Features for AKT1-VDAC1 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/:105235686/:133387399) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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Fusion Gene Sequence for AKT1-VDAC1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
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Fusion Gene PPI Analysis for AKT1-VDAC1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for AKT1-VDAC1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for AKT1-VDAC1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | AKT1 | C0005586 | Bipolar Disorder | 5 | PSYGENET |
Hgene | AKT1 | C0011570 | Mental Depression | 5 | PSYGENET |
Hgene | AKT1 | C0011581 | Depressive disorder | 5 | PSYGENET |
Hgene | AKT1 | C0036341 | Schizophrenia | 5 | CTD_human;GENOMICS_ENGLAND |
Hgene | AKT1 | C0006142 | Malignant neoplasm of breast | 3 | CGI;CTD_human;GENOMICS_ENGLAND;UNIPROT |
Hgene | AKT1 | C0024121 | Lung Neoplasms | 3 | CTD_human |
Hgene | AKT1 | C0085261 | Proteus Syndrome | 3 | CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT |
Hgene | AKT1 | C0242379 | Malignant neoplasm of lung | 3 | CTD_human |
Hgene | AKT1 | C1140680 | Malignant neoplasm of ovary | 3 | CGI;CTD_human;GENOMICS_ENGLAND |
Hgene | AKT1 | C0021368 | Inflammation | 2 | CTD_human |
Hgene | AKT1 | C0033578 | Prostatic Neoplasms | 2 | CTD_human |
Hgene | AKT1 | C0376358 | Malignant neoplasm of prostate | 2 | CTD_human |
Hgene | AKT1 | C0525045 | Mood Disorders | 2 | PSYGENET |
Hgene | AKT1 | C0919267 | ovarian neoplasm | 2 | CGI;CTD_human |
Hgene | AKT1 | C0006868 | Cannabis Abuse | 1 | CTD_human |
Hgene | AKT1 | C0006870 | Cannabis Dependence | 1 | CTD_human |
Hgene | AKT1 | C0007114 | Malignant neoplasm of skin | 1 | CTD_human |
Hgene | AKT1 | C0007137 | Squamous cell carcinoma | 1 | CTD_human |
Hgene | AKT1 | C0009402 | Colorectal Carcinoma | 1 | CTD_human;GENOMICS_ENGLAND |
Hgene | AKT1 | C0014544 | Epilepsy | 1 | CTD_human |
Hgene | AKT1 | C0016059 | Fibrosis | 1 | CTD_human |
Hgene | AKT1 | C0018553 | Hamartoma Syndrome, Multiple | 1 | ORPHANET |
Hgene | AKT1 | C0018614 | Hashish Abuse | 1 | CTD_human |
Hgene | AKT1 | C0018800 | Cardiomegaly | 1 | CTD_human |
Hgene | AKT1 | C0020507 | Hyperplasia | 1 | CTD_human |
Hgene | AKT1 | C0023487 | Acute Promyelocytic Leukemia | 1 | CTD_human |
Hgene | AKT1 | C0024809 | Marijuana Abuse | 1 | CTD_human |
Hgene | AKT1 | C0025286 | Meningioma | 1 | CGI;CTD_human |
Hgene | AKT1 | C0026846 | Muscular Atrophy | 1 | CTD_human |
Hgene | AKT1 | C0028754 | Obesity | 1 | CTD_human |
Hgene | AKT1 | C0030193 | Pain | 1 | CTD_human |
Hgene | AKT1 | C0032580 | Adenomatous Polyposis Coli | 1 | CTD_human |
Hgene | AKT1 | C0032927 | Precancerous Conditions | 1 | CTD_human |
Hgene | AKT1 | C0033141 | Cardiomyopathies, Primary | 1 | CTD_human |
Hgene | AKT1 | C0033937 | Psychoses, Drug | 1 | CTD_human |
Hgene | AKT1 | C0033941 | Psychoses, Substance-Induced | 1 | CTD_human |
Hgene | AKT1 | C0036529 | Myocardial Diseases, Secondary | 1 | CTD_human |
Hgene | AKT1 | C0037286 | Skin Neoplasms | 1 | CTD_human |
Hgene | AKT1 | C0079772 | T-Cell Lymphoma | 1 | CTD_human |
Hgene | AKT1 | C0086237 | Epilepsy, Cryptogenic | 1 | CTD_human |
Hgene | AKT1 | C0205834 | Meningiomas, Multiple | 1 | CTD_human |
Hgene | AKT1 | C0234230 | Pain, Burning | 1 | CTD_human |
Hgene | AKT1 | C0234238 | Ache | 1 | CTD_human |
Hgene | AKT1 | C0234254 | Radiating pain | 1 | CTD_human |
Hgene | AKT1 | C0236018 | Aura | 1 | CTD_human |
Hgene | AKT1 | C0236733 | Amphetamine-Related Disorders | 1 | CTD_human |
Hgene | AKT1 | C0236735 | Cannabis-Related Disorder | 1 | CTD_human |
Hgene | AKT1 | C0236804 | Amphetamine Addiction | 1 | CTD_human |
Hgene | AKT1 | C0236807 | Amphetamine Abuse | 1 | CTD_human |
Hgene | AKT1 | C0259785 | Malignant Meningioma | 1 | CTD_human |
Hgene | AKT1 | C0270948 | Neurogenic Muscular Atrophy | 1 | CTD_human |
Hgene | AKT1 | C0281784 | Benign Meningioma | 1 | CTD_human |
Hgene | AKT1 | C0282313 | Condition, Preneoplastic | 1 | CTD_human |
Hgene | AKT1 | C0334605 | Meningothelial meningioma | 1 | CTD_human |
Hgene | AKT1 | C0334606 | Fibrous Meningioma | 1 | CTD_human |
Hgene | AKT1 | C0334607 | Psammomatous Meningioma | 1 | CTD_human |
Hgene | AKT1 | C0334608 | Angiomatous Meningioma | 1 | CTD_human |
Hgene | AKT1 | C0334609 | Hemangioblastic Meningioma | 1 | CTD_human |
Hgene | AKT1 | C0334610 | Hemangiopericytic Meningioma | 1 | CTD_human |
Hgene | AKT1 | C0334611 | Transitional Meningioma | 1 | CTD_human |
Hgene | AKT1 | C0347515 | Spinal Meningioma | 1 | CTD_human |
Hgene | AKT1 | C0349604 | Intracranial Meningioma | 1 | CTD_human |
Hgene | AKT1 | C0428791 | Aortic valve calcification | 1 | CTD_human |
Hgene | AKT1 | C0431121 | Clear Cell Meningioma | 1 | CTD_human |
Hgene | AKT1 | C0457190 | Xanthomatous Meningioma | 1 | CTD_human |
Hgene | AKT1 | C0458257 | Pain, Splitting | 1 | CTD_human |
Hgene | AKT1 | C0458259 | Pain, Crushing | 1 | CTD_human |
Hgene | AKT1 | C0678222 | Breast Carcinoma | 1 | CGI;CTD_human |
Hgene | AKT1 | C0751111 | Awakening Epilepsy | 1 | CTD_human |
Hgene | AKT1 | C0751303 | Cerebral Convexity Meningioma | 1 | CTD_human |
Hgene | AKT1 | C0751304 | Parasagittal Meningioma | 1 | CTD_human |
Hgene | AKT1 | C0751407 | Pain, Migratory | 1 | CTD_human |
Hgene | AKT1 | C0751408 | Suffering, Physical | 1 | CTD_human |
Hgene | AKT1 | C0878544 | Cardiomyopathies | 1 | CTD_human |
Hgene | AKT1 | C1168401 | Squamous cell carcinoma of the head and neck | 1 | CTD_human |
Hgene | AKT1 | C1257931 | Mammary Neoplasms, Human | 1 | CTD_human |
Hgene | AKT1 | C1334261 | Intraorbital Meningioma | 1 | CTD_human |
Hgene | AKT1 | C1334271 | Intraventricular Meningioma | 1 | CTD_human |
Hgene | AKT1 | C1335107 | Olfactory Groove Meningioma | 1 | CTD_human |
Hgene | AKT1 | C1383860 | Cardiac Hypertrophy | 1 | CTD_human |
Hgene | AKT1 | C1384406 | Secretory meningioma | 1 | CTD_human |
Hgene | AKT1 | C1384408 | Microcystic meningioma | 1 | CTD_human |
Hgene | AKT1 | C1458155 | Mammary Neoplasms | 1 | CTD_human |
Hgene | AKT1 | C1527197 | Angioblastic Meningioma | 1 | CTD_human |
Hgene | AKT1 | C1565950 | Posterior Fossa Meningioma | 1 | CTD_human |
Hgene | AKT1 | C1565951 | Sphenoid Wing Meningioma | 1 | CTD_human |
Hgene | AKT1 | C1623038 | Cirrhosis | 1 | CTD_human |
Hgene | AKT1 | C2713442 | Polyposis, Adenomatous Intestinal | 1 | CTD_human |
Hgene | AKT1 | C2713443 | Familial Intestinal Polyposis | 1 | CTD_human |
Hgene | AKT1 | C3163622 | Papillary Meningioma | 1 | CTD_human |
Hgene | AKT1 | C3554519 | COWDEN SYNDROME 6 | 1 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Hgene | AKT1 | C4704874 | Mammary Carcinoma, Human | 1 | CTD_human |
Tgene | C0011881 | Diabetic Nephropathy | 1 | CTD_human | |
Tgene | C0014544 | Epilepsy | 1 | CTD_human | |
Tgene | C0017667 | Nodular glomerulosclerosis | 1 | CTD_human | |
Tgene | C0027051 | Myocardial Infarction | 1 | CTD_human | |
Tgene | C0027055 | Myocardial Reperfusion Injury | 1 | CTD_human | |
Tgene | C0033922 | Psychomotor Disorders | 1 | CTD_human | |
Tgene | C0086237 | Epilepsy, Cryptogenic | 1 | CTD_human | |
Tgene | C0162668 | Megaconial Myopathies | 1 | CTD_human | |
Tgene | C0162669 | Pleoconial Myopathies | 1 | CTD_human | |
Tgene | C0162670 | Mitochondrial Myopathies | 1 | CTD_human | |
Tgene | C0236018 | Aura | 1 | CTD_human | |
Tgene | C0242698 | Ventricular Dysfunction, Left | 1 | CTD_human | |
Tgene | C0424230 | Motor retardation | 1 | CTD_human | |
Tgene | C0751111 | Awakening Epilepsy | 1 | CTD_human | |
Tgene | C0751456 | Developmental Psychomotor Disorders | 1 | CTD_human | |
Tgene | C0949496 | Luft Disease | 1 | CTD_human |