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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:GCNT2-OSM (FusionGDB2 ID:HG2651TG5008) |
Fusion Gene Summary for GCNT2-OSM |
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Fusion gene information | Fusion gene name: GCNT2-OSM | Fusion gene ID: hg2651tg5008 | Hgene | Tgene | Gene symbol | GCNT2 | OSM | Gene ID | 2651 | 5008 |
Gene name | glucosaminyl (N-acetyl) transferase 2 (I blood group) | oncostatin M | |
Synonyms | CCAT|CTRCT13|GCNT2C|GCNT5|IGNT|II|NACGT1|NAGCT1|ULG3|bA360O19.2|bA421M1.1 | - | |
Cytomap | ('GCNT2')('OSM') 6p24.3-p24.2 | 22q12.2 | |
Type of gene | protein-coding | protein-coding | |
Description | N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferaseI beta-1,6-N-acetylglucosaminyltransferaseIi blood groupbeta-1,6-N-acetylglucosaminyltransferase 2glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) | oncostatin-M | |
Modification date | 20200329 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000397423, ENST00000379597, ENST00000495262, ENST00000265012, ENST00000316170, ENST00000410107, | ||
Fusion gene scores | * DoF score | 8 X 7 X 6=336 | 1 X 1 X 1=1 |
# samples | 9 | 1 | |
** MAII score | log2(9/336*10)=-1.90046432644909 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(1/1*10)=3.32192809488736 | |
Context | PubMed: GCNT2 [Title/Abstract] AND OSM [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | GCNT2(10529074)-OSM(30661133), # samples:1 GCNT2(10530069)-OSM(30661133), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | OSM | GO:0008284 | positive regulation of cell proliferation | 8999038 |
Tgene | OSM | GO:0033138 | positive regulation of peptidyl-serine phosphorylation | 7508917 |
Tgene | OSM | GO:0038165 | oncostatin-M-mediated signaling pathway | 8999038 |
Tgene | OSM | GO:0042531 | positive regulation of tyrosine phosphorylation of STAT protein | 21912637 |
Tgene | OSM | GO:0043410 | positive regulation of MAPK cascade | 7508917 |
Tgene | OSM | GO:0045944 | positive regulation of transcription by RNA polymerase II | 7508917 |
Tgene | OSM | GO:0046888 | negative regulation of hormone secretion | 7867561 |
Tgene | OSM | GO:0050729 | positive regulation of inflammatory response | 28972028 |
Tgene | OSM | GO:0050731 | positive regulation of peptidyl-tyrosine phosphorylation | 7508917|8999038 |
Tgene | OSM | GO:1905078 | positive regulation of interleukin-17 secretion | 28972028 |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | LUAD | TCGA-55-6978-01A | GCNT2 | chr6 | 10529074 | + | OSM | chr22 | 30661133 | - |
ChimerDB4 | LUAD | TCGA-55-6978-01A | GCNT2 | chr6 | 10530069 | - | OSM | chr22 | 30661133 | - |
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Fusion Gene ORF analysis for GCNT2-OSM |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
3UTR-3CDS | ENST00000397423 | ENST00000215781 | GCNT2 | chr6 | 10529074 | + | OSM | chr22 | 30661133 | - |
3UTR-5UTR | ENST00000397423 | ENST00000403389 | GCNT2 | chr6 | 10529074 | + | OSM | chr22 | 30661133 | - |
3UTR-intron | ENST00000397423 | ENST00000403463 | GCNT2 | chr6 | 10529074 | + | OSM | chr22 | 30661133 | - |
5CDS-5UTR | ENST00000379597 | ENST00000403389 | GCNT2 | chr6 | 10530069 | - | OSM | chr22 | 30661133 | - |
5CDS-5UTR | ENST00000495262 | ENST00000403389 | GCNT2 | chr6 | 10530069 | - | OSM | chr22 | 30661133 | - |
5CDS-intron | ENST00000379597 | ENST00000403463 | GCNT2 | chr6 | 10530069 | - | OSM | chr22 | 30661133 | - |
5CDS-intron | ENST00000495262 | ENST00000403463 | GCNT2 | chr6 | 10530069 | - | OSM | chr22 | 30661133 | - |
5UTR-3CDS | ENST00000379597 | ENST00000215781 | GCNT2 | chr6 | 10529074 | + | OSM | chr22 | 30661133 | - |
5UTR-3CDS | ENST00000495262 | ENST00000215781 | GCNT2 | chr6 | 10529074 | + | OSM | chr22 | 30661133 | - |
5UTR-5UTR | ENST00000379597 | ENST00000403389 | GCNT2 | chr6 | 10529074 | + | OSM | chr22 | 30661133 | - |
5UTR-5UTR | ENST00000495262 | ENST00000403389 | GCNT2 | chr6 | 10529074 | + | OSM | chr22 | 30661133 | - |
5UTR-intron | ENST00000379597 | ENST00000403463 | GCNT2 | chr6 | 10529074 | + | OSM | chr22 | 30661133 | - |
5UTR-intron | ENST00000495262 | ENST00000403463 | GCNT2 | chr6 | 10529074 | + | OSM | chr22 | 30661133 | - |
In-frame | ENST00000379597 | ENST00000215781 | GCNT2 | chr6 | 10530069 | - | OSM | chr22 | 30661133 | - |
In-frame | ENST00000495262 | ENST00000215781 | GCNT2 | chr6 | 10530069 | - | OSM | chr22 | 30661133 | - |
intron-3CDS | ENST00000265012 | ENST00000215781 | GCNT2 | chr6 | 10529074 | + | OSM | chr22 | 30661133 | - |
intron-3CDS | ENST00000265012 | ENST00000215781 | GCNT2 | chr6 | 10530069 | - | OSM | chr22 | 30661133 | - |
intron-3CDS | ENST00000316170 | ENST00000215781 | GCNT2 | chr6 | 10529074 | + | OSM | chr22 | 30661133 | - |
intron-3CDS | ENST00000316170 | ENST00000215781 | GCNT2 | chr6 | 10530069 | - | OSM | chr22 | 30661133 | - |
intron-3CDS | ENST00000397423 | ENST00000215781 | GCNT2 | chr6 | 10530069 | - | OSM | chr22 | 30661133 | - |
intron-3CDS | ENST00000410107 | ENST00000215781 | GCNT2 | chr6 | 10529074 | + | OSM | chr22 | 30661133 | - |
intron-3CDS | ENST00000410107 | ENST00000215781 | GCNT2 | chr6 | 10530069 | - | OSM | chr22 | 30661133 | - |
intron-5UTR | ENST00000265012 | ENST00000403389 | GCNT2 | chr6 | 10529074 | + | OSM | chr22 | 30661133 | - |
intron-5UTR | ENST00000265012 | ENST00000403389 | GCNT2 | chr6 | 10530069 | - | OSM | chr22 | 30661133 | - |
intron-5UTR | ENST00000316170 | ENST00000403389 | GCNT2 | chr6 | 10529074 | + | OSM | chr22 | 30661133 | - |
intron-5UTR | ENST00000316170 | ENST00000403389 | GCNT2 | chr6 | 10530069 | - | OSM | chr22 | 30661133 | - |
intron-5UTR | ENST00000397423 | ENST00000403389 | GCNT2 | chr6 | 10530069 | - | OSM | chr22 | 30661133 | - |
intron-5UTR | ENST00000410107 | ENST00000403389 | GCNT2 | chr6 | 10529074 | + | OSM | chr22 | 30661133 | - |
intron-5UTR | ENST00000410107 | ENST00000403389 | GCNT2 | chr6 | 10530069 | - | OSM | chr22 | 30661133 | - |
intron-intron | ENST00000265012 | ENST00000403463 | GCNT2 | chr6 | 10529074 | + | OSM | chr22 | 30661133 | - |
intron-intron | ENST00000265012 | ENST00000403463 | GCNT2 | chr6 | 10530069 | - | OSM | chr22 | 30661133 | - |
intron-intron | ENST00000316170 | ENST00000403463 | GCNT2 | chr6 | 10529074 | + | OSM | chr22 | 30661133 | - |
intron-intron | ENST00000316170 | ENST00000403463 | GCNT2 | chr6 | 10530069 | - | OSM | chr22 | 30661133 | - |
intron-intron | ENST00000397423 | ENST00000403463 | GCNT2 | chr6 | 10530069 | - | OSM | chr22 | 30661133 | - |
intron-intron | ENST00000410107 | ENST00000403463 | GCNT2 | chr6 | 10529074 | + | OSM | chr22 | 30661133 | - |
intron-intron | ENST00000410107 | ENST00000403463 | GCNT2 | chr6 | 10530069 | - | OSM | chr22 | 30661133 | - |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000495262 | GCNT2 | chr6 | 10530069 | - | ENST00000215781 | OSM | chr22 | 30661133 | - | 3239 | 1460 | 535 | 2184 | 549 |
ENST00000379597 | GCNT2 | chr6 | 10530069 | - | ENST00000215781 | OSM | chr22 | 30661133 | - | 3260 | 1481 | 556 | 2205 | 549 |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000495262 | ENST00000215781 | GCNT2 | chr6 | 10530069 | - | OSM | chr22 | 30661133 | - | 0.006645905 | 0.9933541 |
ENST00000379597 | ENST00000215781 | GCNT2 | chr6 | 10530069 | - | OSM | chr22 | 30661133 | - | 0.007795412 | 0.99220467 |
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Fusion Genomic Features for GCNT2-OSM |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
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Fusion Protein Features for GCNT2-OSM |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr6:10529074/chr22:30661133) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | GCNT2 | chr6:10530069 | chr22:30661133 | ENST00000379597 | - | 1 | 3 | 1_7 | 308 | 403.0 | Topological domain | Cytoplasmic |
Hgene | GCNT2 | chr6:10530069 | chr22:30661133 | ENST00000495262 | - | 3 | 5 | 1_7 | 308 | 403.0 | Topological domain | Cytoplasmic |
Hgene | GCNT2 | chr6:10530069 | chr22:30661133 | ENST00000379597 | - | 1 | 3 | 8_23 | 308 | 403.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
Hgene | GCNT2 | chr6:10530069 | chr22:30661133 | ENST00000495262 | - | 3 | 5 | 8_23 | 308 | 403.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | GCNT2 | chr6:10530069 | chr22:30661133 | ENST00000379597 | - | 1 | 3 | 24_400 | 308 | 403.0 | Topological domain | Lumenal |
Hgene | GCNT2 | chr6:10530069 | chr22:30661133 | ENST00000495262 | - | 3 | 5 | 24_400 | 308 | 403.0 | Topological domain | Lumenal |
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Fusion Gene Sequence for GCNT2-OSM |
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>32793_32793_1_GCNT2-OSM_GCNT2_chr6_10530069_ENST00000379597_OSM_chr22_30661133_ENST00000215781_length(transcript)=3260nt_BP=1481nt ATATCTCTCCAGGCAGTATTCACATGCTTTAAACTGAAGCTCGTAGCTTGGCAGTGCAGTTTAAGCAAATAAACTCAGGCTGTTGAACAC AATGATTAACAGGAAGCAGGGGAGGGGACATAGTTACTAGACTCTGGCCGGGACAAGAGGCTGAGGTTAAGGTCTTAGAGCCGATGACTT GCAGAATGGTCACCTCACCCACTTGTAATTTCATGGTGGGAACAGGTGGACCCCCTGGAATCAGAACCTCTCTGAGGACATCTGTTTTTG TGTAGACACAGGTTGCAGGTTAGCAGGAGAACAGGCAAGCCAAATGCAAAGGAGCCACTTCAGAAATGTGTCACAGAAAAGTGAAAATGC AACCTAGTGGTAAGTGAAGAGGGGAAGAAGAAAGAAAAAGGACCAGAACCGTGAACTGAAGGGACAGGGAACAGCCAGACGAGAGCTTCA GCCATCACGAGGATGATTTCGGAACCTGGAGAAAATGTAAGTTAAATATATCTACACTCTGATCCTATCTCAAGAGAGAGATATTTTACT CATTTCCTGGTTGTGAATGATGGGCTCTTGGAAGCACTGTCTTTTTAGCGCGTCTCTTATCTCTGCCCTGATTTTTGTATTTGTTTACAA TACTGAGTTATGGGAGAATAAACGTTTTCTGAGGGCAGCTCTGTCCAATGCTTCACTGTTAGCAGAAGCCTGTCATCAGATTTTTGAGGG GAAAGTTTTTTACCCAACAGAAAATGCATTGAAAACTACCCTTGATGAAGCTACCTGCTATGAGTACATGGTTCGAAGCCACTATGTAAC AGAAACACTCTCTGAAGAAGAGGCTGGGTTCCCTTTAGCTTACACAGTGACCATCCACAAAGACTTCGGCACTTTTGAGAGGCTCTTCAG GGCGATTTATATGCCCCAAAATGTCTACTGTGTGCACCTGGATCAGAAGGCGACGGATGCCTTTAAAGGTGCAGTGAAACAGTTACTCAG CTGCTTCCCAAATGCTTTTCTGGCTTCCAAGAAGGAGTCGGTTGTCTATGGGGGGATCTCCAGGCTCCAGGCTGACCTGAACTGCCTGGA AGACCTTGTGGCCTCTGAAGTTCCCTGGAAGTATGTCATCAACACCTGCGGGCAAGACTTTCCCCTGAAAACCAACAGGGAAATAGTTCA GTATCTGAAGGGATTTAAAGGGAAAAATATCACCCCCGGAGTGCTGCCTCCTGACCACGCTGTTGGACGGACTAAATACGTCCACCAAGA ACTGTTAAACCACAAAAATTCCTACGTGATTAAAACAACAAAATTAAAAACTCCTCCTCCTCATGACATGGTGATTTACTTTGGCACGGC CTACGTGGCTCTCACAAGGGACTTTGCTAACTTCGTCCTCCAAGACCAGCTCGCACTTGACTTACTCTCCTGGTCCAAGGACACCTACAG CCCCGACGAACATTTCTGGGTGACACTCAACAGGATTCCCGGTCTGGTCCTTGCACTCCTGTTTCCAAGCATGGCGAGCATGGCGGCTAT AGGCAGCTGCTCGAAAGAGTACCGCGTGCTCCTTGGCCAGCTCCAGAAGCAGACAGATCTCATGCAGGACACCAGCAGACTCCTGGACCC CTATATACGTATCCAAGGCCTGGATGTTCCTAAACTGAGAGAGCACTGCAGGGAGCGCCCCGGGGCCTTCCCCAGTGAGGAGACCCTGAG GGGGCTGGGCAGGCGGGGCTTCCTGCAGACCCTCAATGCCACACTGGGCTGCGTCCTGCACAGACTGGCCGACTTAGAGCAGCGCCTCCC CAAGGCCCAGGATTTGGAGAGGTCTGGGCTGAACATCGAGGACTTGGAGAAGCTGCAGATGGCGAGGCCGAACATCCTCGGGCTCAGGAA CAACATCTACTGCATGGCCCAGCTGCTGGACAACTCAGACACGGCTGAGCCCACGAAGGCTGGCCGGGGGGCCTCTCAGCCGCCCACCCC CACCCCTGCCTCGGATGCTTTTCAGCGCAAGCTGGAGGGCTGCAGGTTCCTGCATGGCTACCATCGCTTCATGCACTCAGTGGGGCGGGT CTTCAGCAAGTGGGGGGAGAGCCCGAACCGGAGCCGGAGACACAGCCCCCACCAGGCCCTGAGGAAGGGGGTGCGCAGGACCAGACCCTC CAGGAAAGGCAAGAGACTCATGACCAGGGGACAGCTGCCCCGGTAGCCTCGAGAGCACCCCTTGCCGGTGAAGGATGCGGCAGGTGCTCT GTGGATGAGAGGAACCATCGCAGGATGACAGCTCCCGGGTCCCCAAACCTGTTCCCCTCTGCTACTAGCCACTGAGAAGTGCACTTTAAG AGGTGGGAGCTGGGCAGACCCCTCTACCTCCTCCAGGCTGGGAGACAGAGTCAGGCTGTTGCGCTCCCACCTCAGCCCCAAGTTCCCCAG GCCCAGTGGGGTGGCCGGGCGGGCCACGCGGGACCGACTTTCCATTGATTCAGGGGTCTGATGACACAGGCTGACTCATGGCCGGGCTGA CTGCCCCCCTGCCTTGCTCCCCGAGGCCTGCCGGTCCTTCCCTCTCATGACTTGCAGGGCCGTTGCCCCCAGACTTCCTCCTTTCCGTGT TTCTGAAGGGGAGGTCACAGCCTGAGCTGGCCTCCTATGCCTCATCATGTCCCAAACCAGACACCTGGATGTCTGGGTGACCTCACTTTA GGCAGCTGTAACAGCGGCAGGGTGTCCCAGGAGCCCTGATCCGGGGGTCCAGGGAATGGAGCTCAGGTCCCAGGCCAGCCCCGAAGTCGC CACGTGGCCTGGGGCAGGTCACTTTACCTCTGTGGACCTGTTTTCTCTTTGTGAAGCTAGGGAGTTAGAGGCTGTACAAGGCCCCCACTG CCTGTCGGTTGCTTGGATTCCCTGACGTAAGGTGGATATTAAAAATCTGTAAATCAGGACAGGTGGTGCAAATGGCGCTGGGAGGTGTAC ACGGAGGTCTCTGTAAAAGCAGACCCACCTCCCAGCGCCGGGAAGCCCGTCTTGGGTCCTCGCTGCTGGCTGCTCCCCCTGGTGGTGGAT CCTGGAATTTTCTCACGCAGGAGCCATTGCTCTCCTAGAGGGGGTCTCAGAAACTGCGAGGCCAGTTCCTTGGAGGGACATGACTAATTT ATCGATTTTTATCAATTTTTATCAGTTTTATATTTATAAGCCTTATTTATGATGTATATTTAATGTTAATATTGTGCAAACTTATATTTA AAACTTGCCTGGTTTCTAAA >32793_32793_1_GCNT2-OSM_GCNT2_chr6_10530069_ENST00000379597_OSM_chr22_30661133_ENST00000215781_length(amino acids)=549AA_BP=308 MMGSWKHCLFSASLISALIFVFVYNTELWENKRFLRAALSNASLLAEACHQIFEGKVFYPTENALKTTLDEATCYEYMVRSHYVTETLSE EEAGFPLAYTVTIHKDFGTFERLFRAIYMPQNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGGISRLQADLNCLEDLVAS EVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPPDHAVGRTKYVHQELLNHKNSYVIKTTKLKTPPPHDMVIYFGTAYVALT RDFANFVLQDQLALDLLSWSKDTYSPDEHFWVTLNRIPGLVLALLFPSMASMAAIGSCSKEYRVLLGQLQKQTDLMQDTSRLLDPYIRIQ GLDVPKLREHCRERPGAFPSEETLRGLGRRGFLQTLNATLGCVLHRLADLEQRLPKAQDLERSGLNIEDLEKLQMARPNILGLRNNIYCM AQLLDNSDTAEPTKAGRGASQPPTPTPASDAFQRKLEGCRFLHGYHRFMHSVGRVFSKWGESPNRSRRHSPHQALRKGVRRTRPSRKGKR LMTRGQLPR -------------------------------------------------------------- >32793_32793_2_GCNT2-OSM_GCNT2_chr6_10530069_ENST00000495262_OSM_chr22_30661133_ENST00000215781_length(transcript)=3239nt_BP=1460nt AAACAGGCTTACTGTGTTCACTGCTGGACGCCTCTGGGCAATCTTACCCTCCTGGGAACTGAGAGAGACAATGCTAGGAGCCAGAAACAT GAGGAATACATGAGCTCGGCGCCAATGGAACATGCTTTCACACCGGGTGCAGCTAACCACCACATCATACAAAACTCGTCGCTGACGTTT TAGATGTATAATCTGATTGGCATGGACTCACAGAGGAGGGAGTAAGGGAAGAGTAAGAAGATTTCAAAGGAGAGACACAGGTTGCAGGTT AGCAGGAGAACAGGCAAGCCAAATGCAAAGGAGCCACTTCAGAAATGTGTCACAGAAAAGTGAAAATGCAACCTAGTGGTAAGTGAAGAG GGGAAGAAGAAAGAAAAAGGACCAGAACCGTGAACTGAAGGGACAGGGAACAGCCAGACGAGAGCTTCAGCCATCACGAGGATGATTTCG GAACCTGGAGAAAATGTAAGTTAAATATATCTACACTCTGATCCTATCTCAAGAGAGAGATATTTTACTCATTTCCTGGTTGTGAATGAT GGGCTCTTGGAAGCACTGTCTTTTTAGCGCGTCTCTTATCTCTGCCCTGATTTTTGTATTTGTTTACAATACTGAGTTATGGGAGAATAA ACGTTTTCTGAGGGCAGCTCTGTCCAATGCTTCACTGTTAGCAGAAGCCTGTCATCAGATTTTTGAGGGGAAAGTTTTTTACCCAACAGA AAATGCATTGAAAACTACCCTTGATGAAGCTACCTGCTATGAGTACATGGTTCGAAGCCACTATGTAACAGAAACACTCTCTGAAGAAGA GGCTGGGTTCCCTTTAGCTTACACAGTGACCATCCACAAAGACTTCGGCACTTTTGAGAGGCTCTTCAGGGCGATTTATATGCCCCAAAA TGTCTACTGTGTGCACCTGGATCAGAAGGCGACGGATGCCTTTAAAGGTGCAGTGAAACAGTTACTCAGCTGCTTCCCAAATGCTTTTCT GGCTTCCAAGAAGGAGTCGGTTGTCTATGGGGGGATCTCCAGGCTCCAGGCTGACCTGAACTGCCTGGAAGACCTTGTGGCCTCTGAAGT TCCCTGGAAGTATGTCATCAACACCTGCGGGCAAGACTTTCCCCTGAAAACCAACAGGGAAATAGTTCAGTATCTGAAGGGATTTAAAGG GAAAAATATCACCCCCGGAGTGCTGCCTCCTGACCACGCTGTTGGACGGACTAAATACGTCCACCAAGAACTGTTAAACCACAAAAATTC CTACGTGATTAAAACAACAAAATTAAAAACTCCTCCTCCTCATGACATGGTGATTTACTTTGGCACGGCCTACGTGGCTCTCACAAGGGA CTTTGCTAACTTCGTCCTCCAAGACCAGCTCGCACTTGACTTACTCTCCTGGTCCAAGGACACCTACAGCCCCGACGAACATTTCTGGGT GACACTCAACAGGATTCCCGGTCTGGTCCTTGCACTCCTGTTTCCAAGCATGGCGAGCATGGCGGCTATAGGCAGCTGCTCGAAAGAGTA CCGCGTGCTCCTTGGCCAGCTCCAGAAGCAGACAGATCTCATGCAGGACACCAGCAGACTCCTGGACCCCTATATACGTATCCAAGGCCT GGATGTTCCTAAACTGAGAGAGCACTGCAGGGAGCGCCCCGGGGCCTTCCCCAGTGAGGAGACCCTGAGGGGGCTGGGCAGGCGGGGCTT CCTGCAGACCCTCAATGCCACACTGGGCTGCGTCCTGCACAGACTGGCCGACTTAGAGCAGCGCCTCCCCAAGGCCCAGGATTTGGAGAG GTCTGGGCTGAACATCGAGGACTTGGAGAAGCTGCAGATGGCGAGGCCGAACATCCTCGGGCTCAGGAACAACATCTACTGCATGGCCCA GCTGCTGGACAACTCAGACACGGCTGAGCCCACGAAGGCTGGCCGGGGGGCCTCTCAGCCGCCCACCCCCACCCCTGCCTCGGATGCTTT TCAGCGCAAGCTGGAGGGCTGCAGGTTCCTGCATGGCTACCATCGCTTCATGCACTCAGTGGGGCGGGTCTTCAGCAAGTGGGGGGAGAG CCCGAACCGGAGCCGGAGACACAGCCCCCACCAGGCCCTGAGGAAGGGGGTGCGCAGGACCAGACCCTCCAGGAAAGGCAAGAGACTCAT GACCAGGGGACAGCTGCCCCGGTAGCCTCGAGAGCACCCCTTGCCGGTGAAGGATGCGGCAGGTGCTCTGTGGATGAGAGGAACCATCGC AGGATGACAGCTCCCGGGTCCCCAAACCTGTTCCCCTCTGCTACTAGCCACTGAGAAGTGCACTTTAAGAGGTGGGAGCTGGGCAGACCC CTCTACCTCCTCCAGGCTGGGAGACAGAGTCAGGCTGTTGCGCTCCCACCTCAGCCCCAAGTTCCCCAGGCCCAGTGGGGTGGCCGGGCG GGCCACGCGGGACCGACTTTCCATTGATTCAGGGGTCTGATGACACAGGCTGACTCATGGCCGGGCTGACTGCCCCCCTGCCTTGCTCCC CGAGGCCTGCCGGTCCTTCCCTCTCATGACTTGCAGGGCCGTTGCCCCCAGACTTCCTCCTTTCCGTGTTTCTGAAGGGGAGGTCACAGC CTGAGCTGGCCTCCTATGCCTCATCATGTCCCAAACCAGACACCTGGATGTCTGGGTGACCTCACTTTAGGCAGCTGTAACAGCGGCAGG GTGTCCCAGGAGCCCTGATCCGGGGGTCCAGGGAATGGAGCTCAGGTCCCAGGCCAGCCCCGAAGTCGCCACGTGGCCTGGGGCAGGTCA CTTTACCTCTGTGGACCTGTTTTCTCTTTGTGAAGCTAGGGAGTTAGAGGCTGTACAAGGCCCCCACTGCCTGTCGGTTGCTTGGATTCC CTGACGTAAGGTGGATATTAAAAATCTGTAAATCAGGACAGGTGGTGCAAATGGCGCTGGGAGGTGTACACGGAGGTCTCTGTAAAAGCA GACCCACCTCCCAGCGCCGGGAAGCCCGTCTTGGGTCCTCGCTGCTGGCTGCTCCCCCTGGTGGTGGATCCTGGAATTTTCTCACGCAGG AGCCATTGCTCTCCTAGAGGGGGTCTCAGAAACTGCGAGGCCAGTTCCTTGGAGGGACATGACTAATTTATCGATTTTTATCAATTTTTA TCAGTTTTATATTTATAAGCCTTATTTATGATGTATATTTAATGTTAATATTGTGCAAACTTATATTTAAAACTTGCCTGGTTTCTAAA >32793_32793_2_GCNT2-OSM_GCNT2_chr6_10530069_ENST00000495262_OSM_chr22_30661133_ENST00000215781_length(amino acids)=549AA_BP=308 MMGSWKHCLFSASLISALIFVFVYNTELWENKRFLRAALSNASLLAEACHQIFEGKVFYPTENALKTTLDEATCYEYMVRSHYVTETLSE EEAGFPLAYTVTIHKDFGTFERLFRAIYMPQNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGGISRLQADLNCLEDLVAS EVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPPDHAVGRTKYVHQELLNHKNSYVIKTTKLKTPPPHDMVIYFGTAYVALT RDFANFVLQDQLALDLLSWSKDTYSPDEHFWVTLNRIPGLVLALLFPSMASMAAIGSCSKEYRVLLGQLQKQTDLMQDTSRLLDPYIRIQ GLDVPKLREHCRERPGAFPSEETLRGLGRRGFLQTLNATLGCVLHRLADLEQRLPKAQDLERSGLNIEDLEKLQMARPNILGLRNNIYCM AQLLDNSDTAEPTKAGRGASQPPTPTPASDAFQRKLEGCRFLHGYHRFMHSVGRVFSKWGESPNRSRRHSPHQALRKGVRRTRPSRKGKR LMTRGQLPR -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for GCNT2-OSM |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for GCNT2-OSM |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for GCNT2-OSM |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | GCNT2 | C0266539 | Congenital total cataract | 2 | ORPHANET |
Hgene | GCNT2 | C3805373 | CATARACT 13 WITH ADULT i PHENOTYPE | 1 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Tgene | C0011616 | Contact Dermatitis | 1 | CTD_human | |
Tgene | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human | |
Tgene | C0027627 | Neoplasm Metastasis | 1 | CTD_human | |
Tgene | C0087031 | Juvenile-Onset Still Disease | 1 | CTD_human | |
Tgene | C0162351 | Contact hypersensitivity | 1 | CTD_human | |
Tgene | C0263454 | Chloracne | 1 | CTD_human | |
Tgene | C3495559 | Juvenile arthritis | 1 | CTD_human | |
Tgene | C3714758 | Juvenile psoriatic arthritis | 1 | CTD_human | |
Tgene | C4552091 | Polyarthritis, Juvenile, Rheumatoid Factor Negative | 1 | CTD_human | |
Tgene | C4704862 | Polyarthritis, Juvenile, Rheumatoid Factor Positive | 1 | CTD_human |