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in Kim Lab

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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:C22orf34-HDAC10 (FusionGDB2 ID:HG348645TG83933)

Fusion Gene Summary for C22orf34-HDAC10

check button Fusion gene summary
Fusion gene informationFusion gene name: C22orf34-HDAC10
Fusion gene ID: hg348645tg83933
HgeneTgene
Gene symbol

C22orf34

HDAC10

Gene ID

348645

83933

Gene namechromosome 22 open reading frame 34histone deacetylase 10
Synonyms-HD10
Cytomap('C22orf34')('HDAC10')

22q13.33

22q13.33

Type of geneprotein-codingprotein-coding
Descriptionputative uncharacterized protein C22orf34uncharacterized protein C22orf34polyamine deacetylase HDAC10
Modification date2020031320200313
UniProtAcc

Q6ZV56

Q969S8

Ensembl transtripts involved in fusion geneENST00000405854, ENST00000444628, 
ENST00000400023, ENST00000498829, 
Fusion gene scores* DoF score6 X 3 X 4=723 X 3 X 2=18
# samples 63
** MAII scorelog2(6/72*10)=-0.263034405833794
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(3/18*10)=0.736965594166206
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
Context

PubMed: C22orf34 [Title/Abstract] AND HDAC10 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointC22orf34(50020491)-HDAC10(50689334), # samples:1
Anticipated loss of major functional domain due to fusion event.C22orf34-HDAC10 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
C22orf34-HDAC10 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
C22orf34-HDAC10 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
C22orf34-HDAC10 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgeneHDAC10

GO:0000122

negative regulation of transcription by RNA polymerase II

11726666

TgeneHDAC10

GO:0006355

regulation of transcription, DNA-templated

11861901

TgeneHDAC10

GO:0006476

protein deacetylation

17172643

TgeneHDAC10

GO:0006476

protein deacetylation

28516954

TgeneHDAC10

GO:0016575

histone deacetylation

11861901

TgeneHDAC10

GO:0032425

positive regulation of mismatch repair

26221039

TgeneHDAC10

GO:0034983

peptidyl-lysine deacetylation

26221039

TgeneHDAC10

GO:0045892

negative regulation of transcription, DNA-templated

11726666|11861901

TgeneHDAC10

GO:0106047

polyamine deacetylation

28516954

TgeneHDAC10

GO:0106048

spermidine deacetylation

28516954


check buttonFusion gene breakpoints across C22orf34 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure
check buttonFusion gene breakpoints across HDAC10 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4STADTCGA-BR-4357-01AC22orf34chr22

50020491

-HDAC10chr22

50689334

-


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Fusion Gene ORF analysis for C22orf34-HDAC10

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-5UTRENST00000405854ENST00000349505C22orf34chr22

50020491

-HDAC10chr22

50689334

-
5CDS-5UTRENST00000405854ENST00000498366C22orf34chr22

50020491

-HDAC10chr22

50689334

-
5CDS-5UTRENST00000444628ENST00000349505C22orf34chr22

50020491

-HDAC10chr22

50689334

-
5CDS-5UTRENST00000444628ENST00000498366C22orf34chr22

50020491

-HDAC10chr22

50689334

-
In-frameENST00000405854ENST00000216271C22orf34chr22

50020491

-HDAC10chr22

50689334

-
In-frameENST00000405854ENST00000448072C22orf34chr22

50020491

-HDAC10chr22

50689334

-
In-frameENST00000444628ENST00000216271C22orf34chr22

50020491

-HDAC10chr22

50689334

-
In-frameENST00000444628ENST00000448072C22orf34chr22

50020491

-HDAC10chr22

50689334

-
intron-3CDSENST00000400023ENST00000216271C22orf34chr22

50020491

-HDAC10chr22

50689334

-
intron-3CDSENST00000400023ENST00000448072C22orf34chr22

50020491

-HDAC10chr22

50689334

-
intron-3CDSENST00000498829ENST00000216271C22orf34chr22

50020491

-HDAC10chr22

50689334

-
intron-3CDSENST00000498829ENST00000448072C22orf34chr22

50020491

-HDAC10chr22

50689334

-
intron-5UTRENST00000400023ENST00000349505C22orf34chr22

50020491

-HDAC10chr22

50689334

-
intron-5UTRENST00000400023ENST00000498366C22orf34chr22

50020491

-HDAC10chr22

50689334

-
intron-5UTRENST00000498829ENST00000349505C22orf34chr22

50020491

-HDAC10chr22

50689334

-
intron-5UTRENST00000498829ENST00000498366C22orf34chr22

50020491

-HDAC10chr22

50689334

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000405854C22orf34chr2250020491-ENST00000216271HDAC10chr2250689334-3287101210432962639
ENST00000405854C22orf34chr2250020491-ENST00000448072HDAC10chr2250689334-2878101210432812589
ENST00000444628C22orf34chr2250020491-ENST00000216271HDAC10chr2250689334-3399112411553074639
ENST00000444628C22orf34chr2250020491-ENST00000448072HDAC10chr2250689334-2990112411552924589

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000405854ENST00000216271C22orf34chr2250020491-HDAC10chr2250689334-0.099870970.90012896
ENST00000405854ENST00000448072C22orf34chr2250020491-HDAC10chr2250689334-0.068900050.93109995
ENST00000444628ENST00000216271C22orf34chr2250020491-HDAC10chr2250689334-0.095835050.9041649
ENST00000444628ENST00000448072C22orf34chr2250020491-HDAC10chr2250689334-0.066108290.9338918

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Fusion Genomic Features for C22orf34-HDAC10


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

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Fusion Protein Features for C22orf34-HDAC10


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr22:50020491/chr22:50689334)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
C22orf34

Q6ZV56

HDAC10

Q969S8

FUNCTION: Polyamine deacetylase (PDAC), which acts preferentially on N(8)-acetylspermidine, and also on acetylcadaverine and acetylputrescine (PubMed:28516954). Exhibits attenuated catalytic activity toward N(1),N(8)-diacetylspermidine and very low activity, if any, toward N(1)-acetylspermidine (PubMed:28516954). Histone deacetylase activity has been observed in vitro (PubMed:11861901, PubMed:11726666, PubMed:11677242, PubMed:11739383). Has also been shown to be involved in MSH2 deacetylation (PubMed:26221039). The physiological relevance of protein/histone deacetylase activity is unclear and could be very weak (PubMed:28516954). May play a role in the promotion of late stages of autophagy, possibly autophagosome-lysosome fusion and/or lysosomal exocytosis in neuroblastoma cells (PubMed:23801752, PubMed:29968769). May play a role in homologous recombination (PubMed:21247901). May promote DNA mismatch repair (PubMed:26221039). {ECO:0000269|PubMed:11677242, ECO:0000269|PubMed:11726666, ECO:0000269|PubMed:11739383, ECO:0000269|PubMed:11861901, ECO:0000269|PubMed:21247901, ECO:0000269|PubMed:23801752, ECO:0000269|PubMed:26221039, ECO:0000269|PubMed:28516954, ECO:0000269|PubMed:29968769}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneHDAC10chr22:50020491chr22:50689334ENST0000021627102021_2419670.0MotifSubstrate specificity
TgeneHDAC10chr22:50020491chr22:50689334ENST0000034950501921_2419650.0MotifSubstrate specificity

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneC22orf34chr22:50020491chr22:50689334ENST00000400023-1479_980184.0Compositional biasNote=Cys-rich
TgeneHDAC10chr22:50020491chr22:50689334ENST000002162710201_32319670.0RegionNote=Histone deacetylase
TgeneHDAC10chr22:50020491chr22:50689334ENST000003495050191_32319650.0RegionNote=Histone deacetylase


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Fusion Gene Sequence for C22orf34-HDAC10


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>11568_11568_1_C22orf34-HDAC10_C22orf34_chr22_50020491_ENST00000405854_HDAC10_chr22_50689334_ENST00000216271_length(transcript)=3287nt_BP=1012nt
ACGCTTCCTGTACAGCCTGCAGAACTGTGAGTCAACCAAACTTCCTTTTAAAATAAATTACCCAGTCTCAGTTAGGTCTTTCTAGCAGTG
TGAGAACGGACACGTAGAGGGTGTGAGAGCCAGAAGACTTTAAGGAGAGGGACGAGCTGGGGCCTGGATGCCCGGGGAGGTGGACCTGGA
CCAGGACAGGTGTCAGCGGGCAGAGATGGGGCAGAGGTGCGGCTGTCTACCCGCGACCGGGGCCATGCCCTCTCGGGCTCGGTTGAGGAG
CTGCTCTTCCTCCAGAATGCGCTCGGACGGAACGTTAGGAAGGCCCTGGTGAGTGGCCCCGACCTCCTCCCCCAGGACTGGCTTCTCCGG
CCCTCTGCCCTTTCGGGCAGAACAGCTCGTGGCTCTTCCAGGACCTGGGGCTCCATCTTGCAGAACAGCTCGTGGCTCTTCCAGGACCTG
GGGCTCCATCTTGCAGAACAGCTCGTGGCTCTTCCAGGACCTGGGGCTCCATCTTGCTGAGGGGTGCTTTCTTGAGACTCCTTAGGGACG
ATTCTGATTTTCCCTGGAGCTGTACAATGGCGGTTTATCTTTCAAGGTCCCCTGGGCCTGGGCTCCGAGGCAGCCACTTTCCCTGGAGCC
CGTGAAGGAGGTTTGGACGCCAGCTGGGCTGCCTGCCTGTGGCGGGGCAGGAATGAGAGCTGGTGCGGCTGGGGCCCCTGGGTGCCTGGT
CCTGCTCTCATGACGCCCACCCCTTGAACCCTGACATGGGCGCCCAAGGATTCTCCCCGCAGGCTCGCAGACTCACCTGATCACCGGGAG
ATGTTTGAGAAGGAGCCTGTGTCAAAGTGTAGGCATCAGATGAAAATTTACCTTCTTGTTACCTATGTAAATGGGCCGGGCTCCACGAAG
TCCTTGGCTGAGAACGGTGCCACTGACCGACTGAGCTCCCGATCGTTCTGAGAGAGGCTTATGTGCACAGTGGACGTGGAAGGCTTTGAT
GATGTTGGTGAAACTCTCTCTGCCCCGAGTGCGAGATCGAGCGTCCTGAGCGCCTGACCGCAGCCCTGGATCGCCTGCGGCAGCGCGGCC
TGGAACAGAGGTGTCTGCGGTTGTCAGCCCGCGAGGCCTCGGAAGAGGAGCTGGGCCTGGTGCACAGCCCAGAGTATGTATCCCTGGTCA
GGGAGACCCAGGTCCTAGGCAAGGAGGAGCTGCAGGCGCTGTCCGGACAGTTCGACGCCATCTACTTCCACCCGAGTACCTTTCACTGCG
CGCGGCTGGCCGCAGGGGCTGGACTGCAGCTGGTGGACGCTGTGCTCACTGGAGCTGTGCAAAATGGGCTTGCCCTGGTGAGGCCTCCCG
GGCACCATGGCCAGAGGGCGGCTGCCAACGGGTTCTGTGTGTTCAACAACGTGGCCATAGCAGCTGCACATGCCAAGCAGAAACACGGGC
TACACAGGATCCTCGTCGTGGACTGGGATGTGCACCATGGCCAGGGGATCCAGTATCTCTTTGAGGATGACCCCAGCGTCCTTTACTTCT
CCTGGCACCGCTATGAGCATGGGCGCTTCTGGCCTTTCCTGCGAGAGTCAGATGCAGACGCAGTGGGGCGGGGACAGGGCCTCGGCTTCA
CTGTCAACCTGCCCTGGAACCAGGTTGGGATGGGAAACGCTGACTACGTGGCTGCCTTCCTGCACCTGCTGCTCCCACTGGCCTTTGAGT
TTGACCCTGAGCTGGTGCTGGTCTCGGCAGGATTTGACTCAGCCATCGGGGACCCTGAGGGGCAAATGCAGGCCACGCCAGAGTGCTTCG
CCCACCTCACACAGCTGCTGCAGGTGCTGGCCGGCGGCCGGGTCTGTGCCGTGCTGGAGGGCGGCTACCACCTGGAGTCACTGGCGGAGT
CAGTGTGCATGACAGTACAGACGCTGCTGGGTGACCCGGCCCCACCCCTGTCAGGGCCAATGGCGCCATGTCAGAGTGCCCTAGAGTCCA
TCCAGAGTGCCCGTGCTGCCCAGGCCCCGCACTGGAAGAGCCTCCAGCAGCAAGATGTGACCGCTGTGCCGATGAGCCCCAGCAGCCACT
CCCCAGAGGGGAGGCCTCCACCTCTGCTGCCTGGGGGTCCAGTGTGTAAGGCAGCTGCATCTGCACCGAGCTCCCTCCTGGACCAGCCGT
GCCTCTGCCCCGCACCCTCTGTCCGCACCGCTGTTGCCCTGACAACGCCGGATATCACATTGGTTCTGCCCCCTGACGTCATCCAACAGG
AAGCGTCAGCCCTGAGGGAGGAGACAGAAGCCTGGGCCAGGCCACACGAGTCCCTGGCCCGGGAGGAGGCCCTCACTGCACTTGGGAAGC
TCCTGTACCTCTTAGATGGGATGCTGGATGGGCAGGTGAACAGTGGTATAGCAGCCACTCCAGCCTCTGCTGCAGCAGCCACCCTGGATG
TGGCTGTTCGGAGAGGCCTGTCCCACGGAGCCCAGAGGCTGCTGTGCGTGGCCCTGGGACAGCTGGACCGGCCTCCAGACCTCGCCCATG
ACGGGAGGAGTCTGTGGCTGAACATCAGGGGCAAGGAGGCGGCTGCCCTATCCATGTTCCATGTCTCCACGCCACTGCCAGTGATGACCG
GTGGTTTCCTGAGCTGCATCTTGGGCTTGGTGCTGCCCCTGGCCTATGGCTTCCAGCCTGACCTGGTGCTGGTGGCGCTGGGGCCTGGCC
ATGGCCTGCAGGGCCCCCACGCTGCACTCCTGGCTGCAATGCTTCGGGGGCTGGCAGGGGGCCGAGTCCTGGCCCTCCTGGAGGAGAACT
CCACACCCCAGCTAGCAGGGATCCTGGCCCGGGTGCTGAATGGAGAGGCACCTCCTAGCCTAGGCCCTTCCTCTGTGGCCTCCCCAGAGG
ACGTCCAGGCCCTGATGTACCTGAGAGGGCAGCTGGAGCCTCAGTGGAAGATGTTGCAGTGCCATCCTCACCTGGTGGCTTGAAATCGGC
CAAGGTGGGAGCATTTACACCGCAGAAATGACACCGCACGCCAGCGCCCCGCGGCCGCGATCCGGACCCCAAGCCCACGGCTCCCTCGAC
TCTGGGGCACGGAACCCCGCCCACTCCCAATCCCCGCGCCCCGCCCTCTCCCACCCGTGCTTCCCCCGCTCCACCCCTCACCTCACCTCG
CCCCCGCCCCACCCATCGCGCCCCGGCCCGTCCCATCGAGGCCCATGCAACCCACGCTCGGTCCCGTTCCGGCCCCTGCGCCCCGCTGCG

>11568_11568_1_C22orf34-HDAC10_C22orf34_chr22_50020491_ENST00000405854_HDAC10_chr22_50689334_ENST00000216271_length(amino acids)=639AA_BP=
MTAALDRLRQRGLEQRCLRLSAREASEEELGLVHSPEYVSLVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTG
AVQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESD
ADAVGRGQGLGFTVNLPWNQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVCAV
LEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQSALESIQSARAAQAPHWKSLQQQDVTAVPMSPSSHSPEGRPPPLLPGGPVCKA
AASAPSSLLDQPCLCPAPSVRTAVALTTPDITLVLPPDVIQQEASALREETEAWARPHESLAREEALTALGKLLYLLDGMLDGQVNSGIA
ATPASAAAATLDVAVRRGLSHGAQRLLCVALGQLDRPPDLAHDGRSLWLNIRGKEAAALSMFHVSTPLPVMTGGFLSCILGLVLPLAYGF
QPDLVLVALGPGHGLQGPHAALLAAMLRGLAGGRVLALLEENSTPQLAGILARVLNGEAPPSLGPSSVASPEDVQALMYLRGQLEPQWKM

--------------------------------------------------------------
>11568_11568_2_C22orf34-HDAC10_C22orf34_chr22_50020491_ENST00000405854_HDAC10_chr22_50689334_ENST00000448072_length(transcript)=2878nt_BP=1012nt
ACGCTTCCTGTACAGCCTGCAGAACTGTGAGTCAACCAAACTTCCTTTTAAAATAAATTACCCAGTCTCAGTTAGGTCTTTCTAGCAGTG
TGAGAACGGACACGTAGAGGGTGTGAGAGCCAGAAGACTTTAAGGAGAGGGACGAGCTGGGGCCTGGATGCCCGGGGAGGTGGACCTGGA
CCAGGACAGGTGTCAGCGGGCAGAGATGGGGCAGAGGTGCGGCTGTCTACCCGCGACCGGGGCCATGCCCTCTCGGGCTCGGTTGAGGAG
CTGCTCTTCCTCCAGAATGCGCTCGGACGGAACGTTAGGAAGGCCCTGGTGAGTGGCCCCGACCTCCTCCCCCAGGACTGGCTTCTCCGG
CCCTCTGCCCTTTCGGGCAGAACAGCTCGTGGCTCTTCCAGGACCTGGGGCTCCATCTTGCAGAACAGCTCGTGGCTCTTCCAGGACCTG
GGGCTCCATCTTGCAGAACAGCTCGTGGCTCTTCCAGGACCTGGGGCTCCATCTTGCTGAGGGGTGCTTTCTTGAGACTCCTTAGGGACG
ATTCTGATTTTCCCTGGAGCTGTACAATGGCGGTTTATCTTTCAAGGTCCCCTGGGCCTGGGCTCCGAGGCAGCCACTTTCCCTGGAGCC
CGTGAAGGAGGTTTGGACGCCAGCTGGGCTGCCTGCCTGTGGCGGGGCAGGAATGAGAGCTGGTGCGGCTGGGGCCCCTGGGTGCCTGGT
CCTGCTCTCATGACGCCCACCCCTTGAACCCTGACATGGGCGCCCAAGGATTCTCCCCGCAGGCTCGCAGACTCACCTGATCACCGGGAG
ATGTTTGAGAAGGAGCCTGTGTCAAAGTGTAGGCATCAGATGAAAATTTACCTTCTTGTTACCTATGTAAATGGGCCGGGCTCCACGAAG
TCCTTGGCTGAGAACGGTGCCACTGACCGACTGAGCTCCCGATCGTTCTGAGAGAGGCTTATGTGCACAGTGGACGTGGAAGGCTTTGAT
GATGTTGGTGAAACTCTCTCTGCCCCGAGTGCGAGATCGAGCGTCCTGAGCGCCTGACCGCAGCCCTGGATCGCCTGCGGCAGCGCGGCC
TGGAACAGAGGTGTCTGCGGTTGTCAGCCCGCGAGGCCTCGGAAGAGGAGCTGGGCCTGGTGCACAGCCCAGAGTATGTATCCCTGGTCA
GGGAGACCCAGGTCCTAGGCAAGGAGGAGCTGCAGGCGCTGTCCGGACAGTTCGACGCCATCTACTTCCACCCGAGTACCTTTCACTGCG
CGCGGCTGGCCGCAGGGGCTGGACTGCAGCTGGTGGACGCTGTGCTCACTGGAGCTGTGCAAAATGGGCTTGCCCTGGTGAGGCCTCCCG
GGCACCATGGCCAGAGGGCGGCTGCCAACGGGTTCTGTGTGTTCAACAACGTGGCCATAGCAGCTGCACATGCCAAGCAGAAACACGGGC
TACACAGGATCCTCGTCGTGGACTGGGATGTGCACCATGGCCAGGGGATCCAGTATCTCTTTGAGGATGACCCCAGCGTCCTTTACTTCT
CCTGGCACCGCTATGAGCATGGGCGCTTCTGGCCTTTCCTGCGAGAGTCAGATGCAGACGCAGTGGGGCGGGGACAGGGCCTCGGCTTCA
CTGTCAACCTGCCCTGGAACCAGGTTGGGATGGGAAACGCTGACTACGTGGCTGCCTTCCTGCACCTGCTGCTCCCACTGGCCTTTGAGG
GCGGCTACCACCTGGAGTCACTGGCGGAGTCAGTGTGCATGACAGTACAGACGCTGCTGGGTGACCCGGCCCCACCCCTGTCAGGGCCAA
TGGCGCCATGTCAGAGTGCCCTAGAGTCCATCCAGAGTGCCCGTGCTGCCCAGGCCCCGCACTGGAAGAGCCTCCAGCAGCAAGATGTGA
CCGCTGTGCCGATGAGCCCCAGCAGCCACTCCCCAGAGGGGAGGCCTCCACCTCTGCTGCCTGGGGGTCCAGTGTGTAAGGCAGCTGCAT
CTGCACCGAGCTCCCTCCTGGACCAGCCGTGCCTCTGCCCCGCACCCTCTGTCCGCACCGCTGTTGCCCTGACAACGCCGGATATCACAT
TGGTTCTGCCCCCTGACGTCATCCAACAGGAAGCGTCAGCCCTGAGGGAGGAGACAGAAGCCTGGGCCAGGCCACACGAGTCCCTGGCCC
GGGAGGAGGCCCTCACTGCACTTGGGAAGCTCCTGTACCTCTTAGATGGGATGCTGGATGGGCAGGTGAACAGTGGTATAGCAGCCACTC
CAGCCTCTGCTGCAGCAGCCACCCTGGATGTGGCTGTTCGGAGAGGCCTGTCCCACGGAGCCCAGAGGCTGCTGTGCGTGGCCCTGGGAC
AGCTGGACCGGCCTCCAGACCTCGCCCATGACGGGAGGAGTCTGTGGCTGAACATCAGGGGCAAGGAGGCGGCTGCCCTATCCATGTTCC
ATGTCTCCACGCCACTGCCAGTGATGACCGGTGGTTTCCTGAGCTGCATCTTGGGCTTGGTGCTGCCCCTGGCCTATGGCTTCCAGCCTG
ACCTGGTGCTGGTGGCGCTGGGGCCTGGCCATGGCCTGCAGGGCCCCCACGCTGCACTCCTGGCTGCAATGCTTCGGGGGCTGGCAGGGG
GCCGAGTCCTGGCCCTCCTGGAGGAGAACTCCACACCCCAGCTAGCAGGGATCCTGGCCCGGGTGCTGAATGGAGAGGCACCTCCTAGCC
TAGGCCCTTCCTCTGTGGCCTCCCCAGAGGACGTCCAGGCCCTGATGTACCTGAGAGGGCAGCTGGAGCCTCAGTGGAAGATGTTGCAGT

>11568_11568_2_C22orf34-HDAC10_C22orf34_chr22_50020491_ENST00000405854_HDAC10_chr22_50689334_ENST00000448072_length(amino acids)=589AA_BP=
MTAALDRLRQRGLEQRCLRLSAREASEEELGLVHSPEYVSLVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTG
AVQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESD
ADAVGRGQGLGFTVNLPWNQVGMGNADYVAAFLHLLLPLAFEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQSALESIQSARAAQ
APHWKSLQQQDVTAVPMSPSSHSPEGRPPPLLPGGPVCKAAASAPSSLLDQPCLCPAPSVRTAVALTTPDITLVLPPDVIQQEASALREE
TEAWARPHESLAREEALTALGKLLYLLDGMLDGQVNSGIAATPASAAAATLDVAVRRGLSHGAQRLLCVALGQLDRPPDLAHDGRSLWLN
IRGKEAAALSMFHVSTPLPVMTGGFLSCILGLVLPLAYGFQPDLVLVALGPGHGLQGPHAALLAAMLRGLAGGRVLALLEENSTPQLAGI

--------------------------------------------------------------
>11568_11568_3_C22orf34-HDAC10_C22orf34_chr22_50020491_ENST00000444628_HDAC10_chr22_50689334_ENST00000216271_length(transcript)=3399nt_BP=1124nt
CGTGTGCGGTCCCTCCCCCTCACGTTCTCTCTTCCTCTGCTCCGCCATGATGAGAAGCGCCTGCTTCCCCTTCCCCTTCCGCCATGATTG
TGTTTCCTGAGACCTCCCAGCCACGCTTCCTGTACAGCCTGCAGAACTGTGAGTCAACCAAACTTCCTTTTAAAATAAATTACCCAGTCT
CAGTTAGGTCTTTCTAGCAGTGTGAGAACGGACACGTAGAGGGTGTGAGAGCCAGAAGACTTTAAGGAGAGGGACGAGCTGGGGCCTGGA
TGCCCGGGGAGGTGGACCTGGACCAGGACAGGTGTCAGCGGGCAGAGATGGGGCAGAGGTGCGGCTGTCTACCCGCGACCGGGGCCATGC
CCTCTCGGGCTCGGTTGAGGAGCTGCTCTTCCTCCAGAATGCGCTCGGACGGAACGTTAGGAAGGCCCTGGTGAGTGGCCCCGACCTCCT
CCCCCAGGACTGGCTTCTCCGGCCCTCTGCCCTTTCGGGCAGAACAGCTCGTGGCTCTTCCAGGACCTGGGGCTCCATCTTGCAGAACAG
CTCGTGGCTCTTCCAGGACCTGGGGCTCCATCTTGCAGAACAGCTCGTGGCTCTTCCAGGACCTGGGGCTCCATCTTGCTGAGGGGTGCT
TTCTTGAGACTCCTTAGGGACGATTCTGATTTTCCCTGGAGCTGTACAATGGCGGTTTATCTTTCAAGGTCCCCTGGGCCTGGGCTCCGA
GGCAGCCACTTTCCCTGGAGCCCGTGAAGGAGGTTTGGACGCCAGCTGGGCTGCCTGCCTGTGGCGGGGCAGGAATGAGAGCTGGTGCGG
CTGGGGCCCCTGGGTGCCTGGTCCTGCTCTCATGACGCCCACCCCTTGAACCCTGACATGGGCGCCCAAGGATTCTCCCCGCAGGCTCGC
AGACTCACCTGATCACCGGGAGATGTTTGAGAAGGAGCCTGTGTCAAAGTGTAGGCATCAGATGAAAATTTACCTTCTTGTTACCTATGT
AAATGGGCCGGGCTCCACGAAGTCCTTGGCTGAGAACGGTGCCACTGACCGACTGAGCTCCCGATCGTTCTGAGAGAGGCTTATGTGCAC
AGTGGACGTGGAAGGCTTTGATGATGTTGGTGAAACTCTCTCTGCCCCGAGTGCGAGATCGAGCGTCCTGAGCGCCTGACCGCAGCCCTG
GATCGCCTGCGGCAGCGCGGCCTGGAACAGAGGTGTCTGCGGTTGTCAGCCCGCGAGGCCTCGGAAGAGGAGCTGGGCCTGGTGCACAGC
CCAGAGTATGTATCCCTGGTCAGGGAGACCCAGGTCCTAGGCAAGGAGGAGCTGCAGGCGCTGTCCGGACAGTTCGACGCCATCTACTTC
CACCCGAGTACCTTTCACTGCGCGCGGCTGGCCGCAGGGGCTGGACTGCAGCTGGTGGACGCTGTGCTCACTGGAGCTGTGCAAAATGGG
CTTGCCCTGGTGAGGCCTCCCGGGCACCATGGCCAGAGGGCGGCTGCCAACGGGTTCTGTGTGTTCAACAACGTGGCCATAGCAGCTGCA
CATGCCAAGCAGAAACACGGGCTACACAGGATCCTCGTCGTGGACTGGGATGTGCACCATGGCCAGGGGATCCAGTATCTCTTTGAGGAT
GACCCCAGCGTCCTTTACTTCTCCTGGCACCGCTATGAGCATGGGCGCTTCTGGCCTTTCCTGCGAGAGTCAGATGCAGACGCAGTGGGG
CGGGGACAGGGCCTCGGCTTCACTGTCAACCTGCCCTGGAACCAGGTTGGGATGGGAAACGCTGACTACGTGGCTGCCTTCCTGCACCTG
CTGCTCCCACTGGCCTTTGAGTTTGACCCTGAGCTGGTGCTGGTCTCGGCAGGATTTGACTCAGCCATCGGGGACCCTGAGGGGCAAATG
CAGGCCACGCCAGAGTGCTTCGCCCACCTCACACAGCTGCTGCAGGTGCTGGCCGGCGGCCGGGTCTGTGCCGTGCTGGAGGGCGGCTAC
CACCTGGAGTCACTGGCGGAGTCAGTGTGCATGACAGTACAGACGCTGCTGGGTGACCCGGCCCCACCCCTGTCAGGGCCAATGGCGCCA
TGTCAGAGTGCCCTAGAGTCCATCCAGAGTGCCCGTGCTGCCCAGGCCCCGCACTGGAAGAGCCTCCAGCAGCAAGATGTGACCGCTGTG
CCGATGAGCCCCAGCAGCCACTCCCCAGAGGGGAGGCCTCCACCTCTGCTGCCTGGGGGTCCAGTGTGTAAGGCAGCTGCATCTGCACCG
AGCTCCCTCCTGGACCAGCCGTGCCTCTGCCCCGCACCCTCTGTCCGCACCGCTGTTGCCCTGACAACGCCGGATATCACATTGGTTCTG
CCCCCTGACGTCATCCAACAGGAAGCGTCAGCCCTGAGGGAGGAGACAGAAGCCTGGGCCAGGCCACACGAGTCCCTGGCCCGGGAGGAG
GCCCTCACTGCACTTGGGAAGCTCCTGTACCTCTTAGATGGGATGCTGGATGGGCAGGTGAACAGTGGTATAGCAGCCACTCCAGCCTCT
GCTGCAGCAGCCACCCTGGATGTGGCTGTTCGGAGAGGCCTGTCCCACGGAGCCCAGAGGCTGCTGTGCGTGGCCCTGGGACAGCTGGAC
CGGCCTCCAGACCTCGCCCATGACGGGAGGAGTCTGTGGCTGAACATCAGGGGCAAGGAGGCGGCTGCCCTATCCATGTTCCATGTCTCC
ACGCCACTGCCAGTGATGACCGGTGGTTTCCTGAGCTGCATCTTGGGCTTGGTGCTGCCCCTGGCCTATGGCTTCCAGCCTGACCTGGTG
CTGGTGGCGCTGGGGCCTGGCCATGGCCTGCAGGGCCCCCACGCTGCACTCCTGGCTGCAATGCTTCGGGGGCTGGCAGGGGGCCGAGTC
CTGGCCCTCCTGGAGGAGAACTCCACACCCCAGCTAGCAGGGATCCTGGCCCGGGTGCTGAATGGAGAGGCACCTCCTAGCCTAGGCCCT
TCCTCTGTGGCCTCCCCAGAGGACGTCCAGGCCCTGATGTACCTGAGAGGGCAGCTGGAGCCTCAGTGGAAGATGTTGCAGTGCCATCCT
CACCTGGTGGCTTGAAATCGGCCAAGGTGGGAGCATTTACACCGCAGAAATGACACCGCACGCCAGCGCCCCGCGGCCGCGATCCGGACC
CCAAGCCCACGGCTCCCTCGACTCTGGGGCACGGAACCCCGCCCACTCCCAATCCCCGCGCCCCGCCCTCTCCCACCCGTGCTTCCCCCG
CTCCACCCCTCACCTCACCTCGCCCCCGCCCCACCCATCGCGCCCCGGCCCGTCCCATCGAGGCCCATGCAACCCACGCTCGGTCCCGTT

>11568_11568_3_C22orf34-HDAC10_C22orf34_chr22_50020491_ENST00000444628_HDAC10_chr22_50689334_ENST00000216271_length(amino acids)=639AA_BP=
MTAALDRLRQRGLEQRCLRLSAREASEEELGLVHSPEYVSLVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTG
AVQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESD
ADAVGRGQGLGFTVNLPWNQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVCAV
LEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQSALESIQSARAAQAPHWKSLQQQDVTAVPMSPSSHSPEGRPPPLLPGGPVCKA
AASAPSSLLDQPCLCPAPSVRTAVALTTPDITLVLPPDVIQQEASALREETEAWARPHESLAREEALTALGKLLYLLDGMLDGQVNSGIA
ATPASAAAATLDVAVRRGLSHGAQRLLCVALGQLDRPPDLAHDGRSLWLNIRGKEAAALSMFHVSTPLPVMTGGFLSCILGLVLPLAYGF
QPDLVLVALGPGHGLQGPHAALLAAMLRGLAGGRVLALLEENSTPQLAGILARVLNGEAPPSLGPSSVASPEDVQALMYLRGQLEPQWKM

--------------------------------------------------------------
>11568_11568_4_C22orf34-HDAC10_C22orf34_chr22_50020491_ENST00000444628_HDAC10_chr22_50689334_ENST00000448072_length(transcript)=2990nt_BP=1124nt
CGTGTGCGGTCCCTCCCCCTCACGTTCTCTCTTCCTCTGCTCCGCCATGATGAGAAGCGCCTGCTTCCCCTTCCCCTTCCGCCATGATTG
TGTTTCCTGAGACCTCCCAGCCACGCTTCCTGTACAGCCTGCAGAACTGTGAGTCAACCAAACTTCCTTTTAAAATAAATTACCCAGTCT
CAGTTAGGTCTTTCTAGCAGTGTGAGAACGGACACGTAGAGGGTGTGAGAGCCAGAAGACTTTAAGGAGAGGGACGAGCTGGGGCCTGGA
TGCCCGGGGAGGTGGACCTGGACCAGGACAGGTGTCAGCGGGCAGAGATGGGGCAGAGGTGCGGCTGTCTACCCGCGACCGGGGCCATGC
CCTCTCGGGCTCGGTTGAGGAGCTGCTCTTCCTCCAGAATGCGCTCGGACGGAACGTTAGGAAGGCCCTGGTGAGTGGCCCCGACCTCCT
CCCCCAGGACTGGCTTCTCCGGCCCTCTGCCCTTTCGGGCAGAACAGCTCGTGGCTCTTCCAGGACCTGGGGCTCCATCTTGCAGAACAG
CTCGTGGCTCTTCCAGGACCTGGGGCTCCATCTTGCAGAACAGCTCGTGGCTCTTCCAGGACCTGGGGCTCCATCTTGCTGAGGGGTGCT
TTCTTGAGACTCCTTAGGGACGATTCTGATTTTCCCTGGAGCTGTACAATGGCGGTTTATCTTTCAAGGTCCCCTGGGCCTGGGCTCCGA
GGCAGCCACTTTCCCTGGAGCCCGTGAAGGAGGTTTGGACGCCAGCTGGGCTGCCTGCCTGTGGCGGGGCAGGAATGAGAGCTGGTGCGG
CTGGGGCCCCTGGGTGCCTGGTCCTGCTCTCATGACGCCCACCCCTTGAACCCTGACATGGGCGCCCAAGGATTCTCCCCGCAGGCTCGC
AGACTCACCTGATCACCGGGAGATGTTTGAGAAGGAGCCTGTGTCAAAGTGTAGGCATCAGATGAAAATTTACCTTCTTGTTACCTATGT
AAATGGGCCGGGCTCCACGAAGTCCTTGGCTGAGAACGGTGCCACTGACCGACTGAGCTCCCGATCGTTCTGAGAGAGGCTTATGTGCAC
AGTGGACGTGGAAGGCTTTGATGATGTTGGTGAAACTCTCTCTGCCCCGAGTGCGAGATCGAGCGTCCTGAGCGCCTGACCGCAGCCCTG
GATCGCCTGCGGCAGCGCGGCCTGGAACAGAGGTGTCTGCGGTTGTCAGCCCGCGAGGCCTCGGAAGAGGAGCTGGGCCTGGTGCACAGC
CCAGAGTATGTATCCCTGGTCAGGGAGACCCAGGTCCTAGGCAAGGAGGAGCTGCAGGCGCTGTCCGGACAGTTCGACGCCATCTACTTC
CACCCGAGTACCTTTCACTGCGCGCGGCTGGCCGCAGGGGCTGGACTGCAGCTGGTGGACGCTGTGCTCACTGGAGCTGTGCAAAATGGG
CTTGCCCTGGTGAGGCCTCCCGGGCACCATGGCCAGAGGGCGGCTGCCAACGGGTTCTGTGTGTTCAACAACGTGGCCATAGCAGCTGCA
CATGCCAAGCAGAAACACGGGCTACACAGGATCCTCGTCGTGGACTGGGATGTGCACCATGGCCAGGGGATCCAGTATCTCTTTGAGGAT
GACCCCAGCGTCCTTTACTTCTCCTGGCACCGCTATGAGCATGGGCGCTTCTGGCCTTTCCTGCGAGAGTCAGATGCAGACGCAGTGGGG
CGGGGACAGGGCCTCGGCTTCACTGTCAACCTGCCCTGGAACCAGGTTGGGATGGGAAACGCTGACTACGTGGCTGCCTTCCTGCACCTG
CTGCTCCCACTGGCCTTTGAGGGCGGCTACCACCTGGAGTCACTGGCGGAGTCAGTGTGCATGACAGTACAGACGCTGCTGGGTGACCCG
GCCCCACCCCTGTCAGGGCCAATGGCGCCATGTCAGAGTGCCCTAGAGTCCATCCAGAGTGCCCGTGCTGCCCAGGCCCCGCACTGGAAG
AGCCTCCAGCAGCAAGATGTGACCGCTGTGCCGATGAGCCCCAGCAGCCACTCCCCAGAGGGGAGGCCTCCACCTCTGCTGCCTGGGGGT
CCAGTGTGTAAGGCAGCTGCATCTGCACCGAGCTCCCTCCTGGACCAGCCGTGCCTCTGCCCCGCACCCTCTGTCCGCACCGCTGTTGCC
CTGACAACGCCGGATATCACATTGGTTCTGCCCCCTGACGTCATCCAACAGGAAGCGTCAGCCCTGAGGGAGGAGACAGAAGCCTGGGCC
AGGCCACACGAGTCCCTGGCCCGGGAGGAGGCCCTCACTGCACTTGGGAAGCTCCTGTACCTCTTAGATGGGATGCTGGATGGGCAGGTG
AACAGTGGTATAGCAGCCACTCCAGCCTCTGCTGCAGCAGCCACCCTGGATGTGGCTGTTCGGAGAGGCCTGTCCCACGGAGCCCAGAGG
CTGCTGTGCGTGGCCCTGGGACAGCTGGACCGGCCTCCAGACCTCGCCCATGACGGGAGGAGTCTGTGGCTGAACATCAGGGGCAAGGAG
GCGGCTGCCCTATCCATGTTCCATGTCTCCACGCCACTGCCAGTGATGACCGGTGGTTTCCTGAGCTGCATCTTGGGCTTGGTGCTGCCC
CTGGCCTATGGCTTCCAGCCTGACCTGGTGCTGGTGGCGCTGGGGCCTGGCCATGGCCTGCAGGGCCCCCACGCTGCACTCCTGGCTGCA
ATGCTTCGGGGGCTGGCAGGGGGCCGAGTCCTGGCCCTCCTGGAGGAGAACTCCACACCCCAGCTAGCAGGGATCCTGGCCCGGGTGCTG
AATGGAGAGGCACCTCCTAGCCTAGGCCCTTCCTCTGTGGCCTCCCCAGAGGACGTCCAGGCCCTGATGTACCTGAGAGGGCAGCTGGAG
CCTCAGTGGAAGATGTTGCAGTGCCATCCTCACCTGGTGGCTTGAAATCGGCCAAGGTGGGAGCATTTACACCGCAGAAATGACACCGCA

>11568_11568_4_C22orf34-HDAC10_C22orf34_chr22_50020491_ENST00000444628_HDAC10_chr22_50689334_ENST00000448072_length(amino acids)=589AA_BP=
MTAALDRLRQRGLEQRCLRLSAREASEEELGLVHSPEYVSLVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTG
AVQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESD
ADAVGRGQGLGFTVNLPWNQVGMGNADYVAAFLHLLLPLAFEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQSALESIQSARAAQ
APHWKSLQQQDVTAVPMSPSSHSPEGRPPPLLPGGPVCKAAASAPSSLLDQPCLCPAPSVRTAVALTTPDITLVLPPDVIQQEASALREE
TEAWARPHESLAREEALTALGKLLYLLDGMLDGQVNSGIAATPASAAAATLDVAVRRGLSHGAQRLLCVALGQLDRPPDLAHDGRSLWLN
IRGKEAAALSMFHVSTPLPVMTGGFLSCILGLVLPLAYGFQPDLVLVALGPGHGLQGPHAALLAAMLRGLAGGRVLALLEENSTPQLAGI

--------------------------------------------------------------

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Fusion Gene PPI Analysis for C22orf34-HDAC10


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for C22orf34-HDAC10


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status
TgeneHDAC10Q969S8DB13346BufexamacInhibitorSmall moleculeApproved|Withdrawn

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Related Diseases for C22orf34-HDAC10


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource