![]() |
||||||
|
![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:ARID4B-SOX5 (FusionGDB2 ID:HG51742TG6660) |
Fusion Gene Summary for ARID4B-SOX5 |
![]() |
Fusion gene information | Fusion gene name: ARID4B-SOX5 | Fusion gene ID: hg51742tg6660 | Hgene | Tgene | Gene symbol | ARID4B | SOX5 | Gene ID | 51742 | 6660 |
Gene name | AT-rich interaction domain 4B | SRY-box transcription factor 5 | |
Synonyms | BCAA|BRCAA1|RBBP1L1|RBP1L1|SAP180 | L-SOX5|L-SOX5B|L-SOX5F|LAMSHF | |
Cytomap | ('ARID4B')('SOX5') 1q42.3 | 12p12.1 | |
Type of gene | protein-coding | protein-coding | |
Description | AT-rich interactive domain-containing protein 4B180 kDa Sin3-associated polypeptideARID domain-containing protein 4BAT rich interactive domain 4B (RBP1-like)Rb-binding protein homologSIN3A-associated protein 180breast cancer-associated antigen 1bre | transcription factor SOX-5SRY (sex determining region Y)-box 5SRY-box 5 | |
Modification date | 20200320 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000264183, ENST00000366603, ENST00000349213, ENST00000494543, | ||
Fusion gene scores | * DoF score | 23 X 20 X 9=4140 | 16 X 19 X 9=2736 |
# samples | 29 | 18 | |
** MAII score | log2(29/4140*10)=-3.83550596237175 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(18/2736*10)=-3.92599941855622 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ARID4B [Title/Abstract] AND SOX5 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | ARID4B(235377084)-SOX5(24048958), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. | ARID4B-SOX5 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. ARID4B-SOX5 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. ARID4B-SOX5 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. ARID4B-SOX5 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
![]() |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | SOX5 | GO:0032332 | positive regulation of chondrocyte differentiation | 21401405 |
Tgene | SOX5 | GO:0061036 | positive regulation of cartilage development | 21401405 |
Tgene | SOX5 | GO:0071560 | cellular response to transforming growth factor beta stimulus | 21401405 |
Tgene | SOX5 | GO:2000741 | positive regulation of mesenchymal stem cell differentiation | 21401405 |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
![]() |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
![]() |
![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | LUSC | TCGA-77-A5GH-01A | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
Top |
Fusion Gene ORF analysis for ARID4B-SOX5 |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-5UTR | ENST00000264183 | ENST00000309359 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
5CDS-5UTR | ENST00000264183 | ENST00000381381 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
5CDS-5UTR | ENST00000264183 | ENST00000451604 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
5CDS-5UTR | ENST00000264183 | ENST00000537393 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
5CDS-5UTR | ENST00000264183 | ENST00000541536 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
5CDS-5UTR | ENST00000366603 | ENST00000309359 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
5CDS-5UTR | ENST00000366603 | ENST00000381381 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
5CDS-5UTR | ENST00000366603 | ENST00000451604 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
5CDS-5UTR | ENST00000366603 | ENST00000537393 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
5CDS-5UTR | ENST00000366603 | ENST00000541536 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
5CDS-intron | ENST00000264183 | ENST00000396007 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
5CDS-intron | ENST00000264183 | ENST00000441133 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
5CDS-intron | ENST00000264183 | ENST00000536850 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
5CDS-intron | ENST00000264183 | ENST00000541847 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
5CDS-intron | ENST00000264183 | ENST00000545921 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
5CDS-intron | ENST00000366603 | ENST00000396007 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
5CDS-intron | ENST00000366603 | ENST00000441133 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
5CDS-intron | ENST00000366603 | ENST00000536850 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
5CDS-intron | ENST00000366603 | ENST00000541847 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
5CDS-intron | ENST00000366603 | ENST00000545921 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
In-frame | ENST00000264183 | ENST00000546136 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
In-frame | ENST00000366603 | ENST00000546136 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-3CDS | ENST00000349213 | ENST00000546136 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-3CDS | ENST00000494543 | ENST00000546136 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-5UTR | ENST00000349213 | ENST00000309359 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-5UTR | ENST00000349213 | ENST00000381381 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-5UTR | ENST00000349213 | ENST00000451604 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-5UTR | ENST00000349213 | ENST00000537393 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-5UTR | ENST00000349213 | ENST00000541536 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-5UTR | ENST00000494543 | ENST00000309359 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-5UTR | ENST00000494543 | ENST00000381381 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-5UTR | ENST00000494543 | ENST00000451604 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-5UTR | ENST00000494543 | ENST00000537393 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-5UTR | ENST00000494543 | ENST00000541536 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-intron | ENST00000349213 | ENST00000396007 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-intron | ENST00000349213 | ENST00000441133 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-intron | ENST00000349213 | ENST00000536850 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-intron | ENST00000349213 | ENST00000541847 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-intron | ENST00000349213 | ENST00000545921 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-intron | ENST00000494543 | ENST00000396007 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-intron | ENST00000494543 | ENST00000441133 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-intron | ENST00000494543 | ENST00000536850 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-intron | ENST00000494543 | ENST00000541847 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
intron-intron | ENST00000494543 | ENST00000545921 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - |
![]() |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000366603 | ARID4B | chr1 | 235377084 | - | ENST00000546136 | SOX5 | chr12 | 24048958 | - | 9187 | 2218 | 2200 | 4473 | 757 |
ENST00000264183 | ARID4B | chr1 | 235377084 | - | ENST00000546136 | SOX5 | chr12 | 24048958 | - | 9308 | 2339 | 2321 | 4594 | 757 |
![]() |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000366603 | ENST00000546136 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - | 0.000356448 | 0.99964356 |
ENST00000264183 | ENST00000546136 | ARID4B | chr1 | 235377084 | - | SOX5 | chr12 | 24048958 | - | 0.000442414 | 0.99955755 |
Top |
Fusion Genomic Features for ARID4B-SOX5 |
![]() |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
![]() |
![]() |
Top |
Fusion Protein Features for ARID4B-SOX5 |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr1:235377084/chr12:24048958) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
![]() |
![]() |
Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000264183 | - | 17 | 24 | 154_159 | 613 | 1313.0 | Compositional bias | Note=Poly-Ser |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000264183 | - | 17 | 24 | 268_567 | 613 | 1313.0 | Compositional bias | Note=Glu-rich |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000366603 | - | 17 | 24 | 154_159 | 613 | 1313.0 | Compositional bias | Note=Poly-Ser |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000366603 | - | 17 | 24 | 268_567 | 613 | 1313.0 | Compositional bias | Note=Glu-rich |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000264183 | - | 17 | 24 | 306_398 | 613 | 1313.0 | Domain | ARID |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000366603 | - | 17 | 24 | 306_398 | 613 | 1313.0 | Domain | ARID |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000264183 | - | 17 | 24 | 465_473 | 613 | 1313.0 | Region | Note=Antigenic epitope |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000366603 | - | 17 | 24 | 465_473 | 613 | 1313.0 | Region | Note=Antigenic epitope |
Tgene | SOX5 | chr1:235377084 | chr12:24048958 | ENST00000309359 | 0 | 15 | 193_274 | 0 | 751.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | SOX5 | chr1:235377084 | chr12:24048958 | ENST00000309359 | 0 | 15 | 448_515 | 0 | 751.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | SOX5 | chr1:235377084 | chr12:24048958 | ENST00000381381 | 0 | 13 | 193_274 | 0 | 643.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | SOX5 | chr1:235377084 | chr12:24048958 | ENST00000381381 | 0 | 13 | 448_515 | 0 | 643.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | SOX5 | chr1:235377084 | chr12:24048958 | ENST00000396007 | 0 | 7 | 193_274 | 0 | 378.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | SOX5 | chr1:235377084 | chr12:24048958 | ENST00000396007 | 0 | 7 | 448_515 | 0 | 378.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | SOX5 | chr1:235377084 | chr12:24048958 | ENST00000451604 | 0 | 15 | 193_274 | 12 | 764.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | SOX5 | chr1:235377084 | chr12:24048958 | ENST00000451604 | 0 | 15 | 448_515 | 12 | 764.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | SOX5 | chr1:235377084 | chr12:24048958 | ENST00000541536 | -1 | 12 | 193_274 | 77 | 643.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | SOX5 | chr1:235377084 | chr12:24048958 | ENST00000541536 | -1 | 12 | 448_515 | 77 | 643.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | SOX5 | chr1:235377084 | chr12:24048958 | ENST00000545921 | 0 | 15 | 193_274 | 2 | 754.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | SOX5 | chr1:235377084 | chr12:24048958 | ENST00000545921 | 0 | 15 | 448_515 | 2 | 754.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | SOX5 | chr1:235377084 | chr12:24048958 | ENST00000546136 | -1 | 14 | 193_274 | 77 | 751.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | SOX5 | chr1:235377084 | chr12:24048958 | ENST00000546136 | -1 | 14 | 448_515 | 77 | 751.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | SOX5 | chr1:235377084 | chr12:24048958 | ENST00000309359 | 0 | 15 | 556_624 | 0 | 751.0 | DNA binding | HMG box | |
Tgene | SOX5 | chr1:235377084 | chr12:24048958 | ENST00000381381 | 0 | 13 | 556_624 | 0 | 643.0 | DNA binding | HMG box | |
Tgene | SOX5 | chr1:235377084 | chr12:24048958 | ENST00000396007 | 0 | 7 | 556_624 | 0 | 378.0 | DNA binding | HMG box | |
Tgene | SOX5 | chr1:235377084 | chr12:24048958 | ENST00000451604 | 0 | 15 | 556_624 | 12 | 764.0 | DNA binding | HMG box | |
Tgene | SOX5 | chr1:235377084 | chr12:24048958 | ENST00000541536 | -1 | 12 | 556_624 | 77 | 643.0 | DNA binding | HMG box | |
Tgene | SOX5 | chr1:235377084 | chr12:24048958 | ENST00000545921 | 0 | 15 | 556_624 | 2 | 754.0 | DNA binding | HMG box | |
Tgene | SOX5 | chr1:235377084 | chr12:24048958 | ENST00000546136 | -1 | 14 | 556_624 | 77 | 751.0 | DNA binding | HMG box |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000264183 | - | 17 | 24 | 1231_1270 | 613 | 1313.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000264183 | - | 17 | 24 | 728_754 | 613 | 1313.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000349213 | - | 1 | 23 | 1231_1270 | 0 | 1227.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000349213 | - | 1 | 23 | 728_754 | 0 | 1227.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000366603 | - | 17 | 24 | 1231_1270 | 613 | 1313.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000366603 | - | 17 | 24 | 728_754 | 613 | 1313.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000264183 | - | 17 | 24 | 1095_1101 | 613 | 1313.0 | Compositional bias | Note=Poly-Ser |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000264183 | - | 17 | 24 | 1271_1303 | 613 | 1313.0 | Compositional bias | Note=Ser-rich |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000349213 | - | 1 | 23 | 1095_1101 | 0 | 1227.0 | Compositional bias | Note=Poly-Ser |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000349213 | - | 1 | 23 | 1271_1303 | 0 | 1227.0 | Compositional bias | Note=Ser-rich |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000349213 | - | 1 | 23 | 154_159 | 0 | 1227.0 | Compositional bias | Note=Poly-Ser |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000349213 | - | 1 | 23 | 268_567 | 0 | 1227.0 | Compositional bias | Note=Glu-rich |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000366603 | - | 17 | 24 | 1095_1101 | 613 | 1313.0 | Compositional bias | Note=Poly-Ser |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000366603 | - | 17 | 24 | 1271_1303 | 613 | 1313.0 | Compositional bias | Note=Ser-rich |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000349213 | - | 1 | 23 | 306_398 | 0 | 1227.0 | Domain | ARID |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000264183 | - | 17 | 24 | 1130_1137 | 613 | 1313.0 | Region | Note=Antigenic epitope |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000349213 | - | 1 | 23 | 1130_1137 | 0 | 1227.0 | Region | Note=Antigenic epitope |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000349213 | - | 1 | 23 | 465_473 | 0 | 1227.0 | Region | Note=Antigenic epitope |
Hgene | ARID4B | chr1:235377084 | chr12:24048958 | ENST00000366603 | - | 17 | 24 | 1130_1137 | 613 | 1313.0 | Region | Note=Antigenic epitope |
Top |
Fusion Gene Sequence for ARID4B-SOX5 |
![]() |
>6488_6488_1_ARID4B-SOX5_ARID4B_chr1_235377084_ENST00000264183_SOX5_chr12_24048958_ENST00000546136_length(transcript)=9308nt_BP=2339nt AAAGGGGGGGAACCTAGAGTCGGTGGGGGGGAAGCGATGTTTGCCCGTCAGTCGAGTCCGGAGTGAGGAGCTCGGTCGCCGAAGCGGAGG GAGACTCTTGAGCTTCATCTTGCCGCCGCCACGGCCACCGCCTGGACCTTTGCCCGGAGGGAGCTGCAGAGGGTCCATCGCCGCCGTCCT CTGGAGGGCAGCGCGATTGGGGGCCCGGACCTCCAGTCCGGGGGGGATTTTTCGTCGTCCCCCTCCCCCCAACCAGGGAGCCCGAGCGGC CGCCAAACAAAGGTACCAGTCGCCGCCGCGGGAGGAGGAGGAGCCGGAGCCTCTGCCTCAGCAGCCGCTGGACCCGCCGCCCTTCTTCCC CATCTCTCCCCCGGGCCTGCTGGTTTTGGGGGGGAGAAGGAGAGAGGGGACTCTGGACGTGCCAGGGTCAGATCTCGCCTCCGAGGAAGG TGCAGCTGAACCTGGTGTTTTAGAGGATACCTTGGTCCCAGAGTCATCATGAAGGCCCTTGATGAGCCTCCCTATTTGACAGTGGGCACT GATGTGAGTGCTAAATACAGAGGAGCCTTTTGTGAAGCCAAGATCAAGACAGCAAAAAGACTTGTCAAAGTCAAGGTGACATTTAGACAT GATTCTTCAACAGTGGAAGTTCAGGATGACCACATAAAGGGCCCACTAAAGGTAGGAGCTATTGTGGAAGTGAAGAATCTTGATGGTGCA TATCAGGAAGCTGTTATCAATAAACTAACAGATGCGAGTTGGTACACTGTAGTTTTTGATGACGGAGATGAGAAGACACTGAGACGATCT TCACTGTGCCTGAAAGGAGAGAGGCATTTTGCTGAAAGTGAAACATTAGACCAGCTCCCACTCACCAACCCTGAGCATTTTGGCACTCCA GTCATAGGAAAGAAAACAAATAGAGGAAGAAGATCTAATCATATACCAGAGGAAGAGTCTTCATCATCCTCCAGTGATGAAGATGAGGAT GATAGGAAACAGATTGATGAGCTACTAGGCAAAGTTGTATGTGTAGATTACATTAGTTTGGATAAAAAGAAAGCACTGTGGTTTCCTGCA TTGGTGGTTTGTCCTGATTGTAGTGATGAGATTGCTGTAAAAAAGGACAATATTCTTGTTCGATCTTTCAAAGATGGAAAATTTACTTCA GTTCCAAGAAAAGATGTCCATGAAATTACTAGTGACACTGCACCAAAGCCTGATGCTGTTTTAAAGCAAGCCTTTGAACAGGCACTTGAA TTTCACAAAAGTAGAACTATTCCTGCTAACTGGAAGACTGAATTGAAAGAAGATAGCTCTAGCAGTGAAGCAGAGGAAGAAGAGGAGGAG GAAGATGATGAAAAAGAAAAGGAGGATAATAGCAGTGAAGAAGAAGAAGAAATAGAACCATTTCCAGAAGAAAGGGAGAACTTTCTTCAG CAATTGTACAAATTTATGGAAGATAGAGGTACACCTATTAACAAACGACCTGTACTTGGATATCGAAATTTGAATCTCTTTAAGTTATTC AGACTTGTACACAAACTTGGAGGATTTGATAATATTGAAAGTGGAGCTGTTTGGAAACAAGTCTACCAAGATCTTGGAATCCCTGTCTTA AATTCAGCTGCAGGATACAATGTTAAATGTGCTTATAAAAAATACTTATATGGTTTTGAGGAGTACTGTAGATCAGCCAACATTGAATTT CAGATGGCATTGCCAGAGAAAGTTGTTAACAAGCAATGTAAGGAGTGTGAAAATGTAAAAGAAATAAAAGTTAAGGAGGAAAATGAAACA GAGATCAAAGAAATAAAGATGGAGGAGGAGAGGAATATAATACCAAGAGAAGAAAAGCCTATTGAGGATGAAATTGAAAGAAAAGAAAAT ATTAAGCCCTCTCTGGGAAGTAAAAAGAATTTATTAGAATCTATACCTACACATTCTGATCAGGAAAAAGAAGTTAACATTAAAAAACCA GAAGACAATGAAAATCTGGATGACAAAGATGATGACACAACTAGGGTAGATGAATCCCTCAACATAAAGGTAGAAGCTGAGGAAGAAAAA GCAAAATCTGGAGATGAAACGAATAAAGAAGAAGATGAAGATGATGAAGAAGCAGAAGAGGAGGAGGAGGAGGAAGAAGAAGAAGAGGAT GAAGATGATGATGACAACAATGAGGAAGAGGAGTTTGAGTGCTATCCACCAGGCATGAAAGTCCAAGTGCGGTATGGACGAGGGAAAAAT CAAAAAATGTATGAAGCTAGTATTAAAGATTCTGATGTCGAAGGTGGAGAGGTCCTTTACTTGGTGCATTACTGCGGATGGAATGTGAGA GGATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAAGAGG AGAGTGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTTTCTCTGC TGACGCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCACAATACAATGGAAGTTGATGGCAATAAAGTTATGTCTTCATTTGCCC CACACAACTCATCTACCTCACCTCAGAAGGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCTG AACGGCGCAAGGGCAGTTTAGCTGATGTTGTTGACACCTTGAAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAAACCC CCAGTATTGAAAAACTACTCTCAAAGGACTGGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGGCGAAATAAAAGGGACTCCCG AGAGCTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGCCCACGATGAGC AGAAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCGTCAGCAAATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGCAAGACAGCAGC AGCAGCTTCTACAGCAACAACACAAAATCAATTTGCTCCAGCAACAGATCCAGGTTCAAGGTCAGCTGCCGCCATTAATGATTCCCGTAT TCCCTCCTGATCAACGGACACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCTCCCTCCAGGCTTCAGCTATAAGGCTGGATGTAGTGACC CTTACCCTGTTCAGCTGATCCCAACTACCATGGCAGCTGCTGCCGCAGCAACACCAGGCTTAGGCCCACTCCAACTGCAGCAGTTATATG CTGCCCAGCTAGCTGCAATGCAGGTATCTCCAGGAGGGAAGCTGCCAGGCATACCCCAAGGCAACCTTGGTGCTGCTGTATCTCCTACCA GCATTCACACAGACAAGAGCACAAACAGCCCACCACCCAAAAGCAAGGATGAAGTGGCACAGCCACTGAACCTATCAGCTAAACCCAAGA CCTCTGATGGCAAATCACCCACATCACCCACCTCTCCCCATATGCCAGCTCTGAGAATAAACAGTGGGGCAGGCCCCCTCAAAGCCTCTG TCCCAGCAGCGTTAGCTAGTCCTTCAGCCAGAGTTAGCACAATAGGTTACTTAAATGACCATGATGCTGTCACCAAGGCAATCCAAGAAG CTCGGCAAATGAAGGAGCAACTCCGACGGGAACAACAGGTGCTTGATGGGAAGGTGGCTGTTGTGAATAGTCTGGGTCTCAATAACTGCC GAACAGAAAAGGAAAAAACAACACTGGAGAGTCTGACTCAGCAACTGGCAGTTAAACAGAATGAAGAAGGAAAATTTAGCCATGCAATGA TGGATTTCAATCTGAGTGGAGATTCTGATGGAAGTGCTGGAGTCTCAGAGTCAAGAATTTATAGGGAATCCCGAGGGCGTGGTAGCAATG AACCCCACATAAAGCGTCCAATGAATGCCTTCATGGTGTGGGCTAAAGATGAACGGAGAAAGATCCTTCAAGCCTTTCCTGACATGCACA ACTCCAACATCAGCAAGATATTGGGATCTCGCTGGAAAGCTATGACAAACCTAGAGAAACAGCCATATTATGAGGAGCAAGCCCGTCTCA GCAAGCAGCACCTGGAGAAGTACCCTGACTATAAGTACAAGCCCAGGCCAAAGCGCACCTGCCTGGTGGATGGCAAAAAGCTGCGCATTG GTGAATACAAGGCAATCATGCGCAACAGGCGGCAGGAAATGCGGCAGTACTTCAATGTTGGGCAACAAGCACAGATCCCCATTGCCACTG CTGGTGTTGTGTACCCTGGAGCCATCGCCATGGCTGGGATGCCCTCCCCTCACCTGCCCTCGGAGCACTCAAGCGTGTCTAGCAGCCCAG AGCCTGGGATGCCTGTTATCCAGAGCACTTACGGTGTGAAAGGAGAGGAGCCACATATCAAAGAAGAGATACAGGCCGAGGACATCAATG GAGAAATTTATGATGAGTACGACGAGGAAGAGGATGATCCAGATGTAGATTATGGGAGTGACAGTGAAAACCATATTGCAGGACAAGCCA ACTGATAAGGGTCAAAAGATTGTTGTGACCTTAGGACTTAAAGAAGCCCTAACTGGTTCATCCTTACCAGTGGCCAAGCACATTAACTTT CTCATACACTGACTGTTACTTTAACTGTTAGTCTTAAATAGTTGGGACATCAGCTGACTAATAGACCTCAGCCTCAAAAGGCTTGGAAAG AAAAAACAAATACAACAAGCAAACAACAATATCAACAACAAGAGATTGAAATAAGCTATGGGTAAAATAATGCCAGTAATTCAGCTGCTA CATCCAAGCACTGAAGTCTTACCCGTCAACTTTTTTTTTTTTTTAAATAAACTTTATGGCTGTTTGTTCTACAATGTTCTAGAAATTCTC ACTCAGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATTTTTAAAAAGAAAAAAGTTTTGTTTTGTT TTTTGGGGTTTCTGGGTTTTTTCCTTTTCTTTTTCTTTCCTTTCATTTTTTTTCTTTGTAATGCACCTGACAGAAAAAAAAGAAAAATGA ATTTCTCTTTACTTCTCTCCACCTTCTCCATCTCTCTACTTTAAAGATGGAAGTCTGTGCATGAGGGGAAAGAGGGAAAAAGAGCCTGTT TTTAACTTCCTTGCTATCCACCACAAAATAAGCAATTATTTTCTTTAGAGGACTTTATCTATTGCACACCACACTACATCTTTGAGCAAG TGCCAAATTTGTACTGAAGTGTTGACCAAGTTCATTTTTTCTCTTTACTTTTTCCTTTTCCTTCTTAAGTTAGGACAGTGTTAAATCTTA GACAATCCCTTGAAAAACCTGAAATACCAGCAGCTGGTGAGATTTGACTTTTTTTTTTAATGGAAACTGTAGGTGCTGTTCTCAGGTGAA AAGAGAGAGAGAGAGAGAGACATAAGAAATTTAGAGAAAAATATTTTCTGATCTTGGATTTTTGTGTGTATGTATGTATGTGATTATGGT ACTAATAATAGGAATAACGTTGGACCATTGTGAGTTAAACCCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAA TAATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTCAGAAATTATATTTTTAAATGTCTGATTATTATTGG ATGGATCAGGTGGCCCTGTGTAATAGAGGTGTGCATGTATAACATGGAAGCTACTAGCAAACTGCTCCCAGATGTCCTTTCTCCCTGGTC AGTTGGTTCCATTAACGTTTGCTACTTAGTGATTTTTGTTTTTCCTGTTGATATTTTGAGCAAAACAATCATTGTTTTCATTGAATATAT TTGGCCATTTTTTCAGACAAATAGAATTAGCTTATTTCTTCAACATTCCATCCTTTCCCGATCAGGAAATGAAACTGATGATTTTATAAG GTATTTTTCACCCCTCCATGAAGTGAGGTGGAGGCCTTTAGCATTTCAGAAGTGTGGGCCATATGTAGTTCATGCCATAAAAAGTAGGAT TTAATTAAAAGTCATTGCAGCCCAATAAAATGGAGCCTGGCTGCACCCAGGGATCCTTGCCACTGCTCTTCCCTTGCTGTCAGATTAATC CACTGAAGTCCAACTTTGGTTCAAGCAGAGTATTTGCAAAGAGCAACAACTGAATGTGATGGGACTGCTTATGTAGATTTTGCCAGCCAA ATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATGCAAAATCATTTCAAGTCAATTGCCATTATTTGTATTGAAGTATCAGATAGATAG TAAATACTGCAACTAGTAGCTTGATGTGCTATAGTTTTCACTCCAGTCATCATTTTCCTATCTCACCCCCCGAAACACCACCCTAAAGTT GGATTTTTACATATAAATAAAAAAAGAATCCCTTTTATTTTTCTCTCTCTCAGAAGACTTGCTCTGGGGTTTTGCTTGGAGGAGCTGATC ATATCCTGCATGTCAGAGATTTCATTTTGTTTGTTTTTCTGTTTGTTTGTTTTTGATGACTTTATTTACATTTGAACTGCCTCTTTTTGC TAGTGTTGTAATGATGATGATGATAAAATAATAATAATAATAGTAATAATAATAATAATGGTCAGCTGTTCCCAGATTAGTAAGTTATGT ATAATTTATTTTATTTCTCCCTTTCTATTTTATTCTGCTCTGATTTGGAAGTGCAGCCAATAAGCTGTTAGATATTTAAAACAAATTTCC ATCTCCAACTCATATATGTATGTATATGTATATATATATATACATATATATACACACATATACACACACACACACACATTTACCCACAAT TTTACTTCTCTTTCCGTAAGTTTTCTCTTTTTTAAGAATTTTGGCCCCAACAATATCAGTTCTGATGTTTAAAACAAAGGAGTGAATTAA TAGGAGGGTCGTGTTCAATCTTAATTAACTTATGCTCTCATCACTCATTTTAGTTATTTAATTGCCACAGTCATCTAGAGCCAATTTTTT TTTGTTTTTGTTTGTTTTGTTTTTAAGCACTCTGGATAAGGAAAAAATAGACACTTGTTTTTATATCATTTTTATGTACAATGTGAAAAC AGATTTTTAAAAAATTTGTTCTCTGTCTTTGTTAACAAATTCCTTCCGATTTATGTGGGTTCACCTCTCACGTTTGCTGGATACTTACTT TACACCATGTTATGAAAGATGCTTTGTTTTCATTTCATGAGTTTGGGCTACAAGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAA GGCATTCATGGCTGAAATCAATTCTAACACACTTACCGATGAATTGACAACACTTTGGTGTTTGGTCTTTTTTTTGTTATATTTTGTTTT ATTTGAAGGGGAAAACAAAATTGTTAATGGTGACTTTTAACTGCTGAAATTCAAAATTTGATTTTAGTTAGGTTTATGTCCGAGACTAAA CTGTGCATGAACCGAAACAAAAAGCAAGTTCATACCGCTGCATTCTGTTCTCTTGTTCTGACGGTTAATTCACTGGACATCAAATTTTCT TTGCCCTAGTTTTCCCCAAAAGAAAACAAAAGCAAAAATAGTTATATTAATGTTGAAAGTGCTTTGAAGTCACTTGATAAAAGGTGCTAT GAATAGCAACTTACTGTGTTACTACATTGCCTTTTTGGCATTGGTTGATTTATAATTTTGGTAAAGGATCCTAAAACCCTGTATTCTTTT TCTGTGCCCCATAATGACCAAAAAAGATAAAGAAAATGAGAGTAAGATCAAAAGATCAAACTAAAACATAAACAGTCTCCTTCCTGTCTG CTTTCTTACCTATCTGTTCACACTTTATCTCTTTCCCTTTCTCTCTCTCTCTCACATGCGCGCGCGCGCGCGCGCACACACACACACACA CACACTTGCCCCAACACTGAGAAATAATCTTGCCAGAATTCTGGTTTTTATAGTTGTTGTAGTCCGTTTCTCTAAAAATAGTCCTGTTTT CATATGAATCTAAGAGAACATTACCGGAGAAAATAAAGTTACTCATTTATAGTTACTAATAATAAGTTAGTGATTAACTTACCACAATTG GATAAAATATAAAACTATTCTTCAGCACATTTATACCTAAATTAGTGAAGTCCATTTGTGAAGTTCATTTGGCATCTGCAGTTAAGAGTT AACCATGTATAAAATCCCTCCCAAAGAACATAATCATCGTTAGAACCAAATCCTCTTATAAAGAACAAATATAAAAAAGTTTTCTGTGGT GAAGCTATTTTATAGATTTGATTTCCGGAGTAGAATTTTACCTTAATTCACTTAAAGAAAATTAACCATTTTTTGGTCCAACTTCAGATA TTTTCTTAATCCAGAAGCTGTGACTGTTCCCAGAAGAAACCTCTTATATCACATTTAAAACATAAAAAATAATTACACTTTCACTCATTC TAATGGGTAAATTGTTGAATTGTAATAAACAACTGTATATTTACAAACAGGTTTATAAGGTATTTGTCTATCAAATTAATAATAAAATAA AACTTACGGGGTCTGCAAGGAAAACTATGAAGGCCACTTAAAGTGGTTCAGGTATCCCTTTGTCTTGTAGGGCATAGCTGTTGGTTTAGC CAGGCTTTTACAGTATTTAATTTTAAAGTATCCTATAACTATCAACTTCCCAGGTTGAAGACGATGTGTTGAGTTTCCTACTGATTGATT GATTCCTGTCCTCCCCAGTGTTTCCGTCACTGGTTCACTAAAACAGTATTTATATAGCTCCACTGGCTCTAAAGCTCTTAGTCCTTCTAA TATTTTGGATTTTACAAGTAAAAATGGAAAAAAAATAGAAAAGAGACAATCAAATGCCTGGAGCTTAAAACAAAGTATGTGCAACCTACC ATCTCACTTGAAATTTAATAAAATAATAAGTAATTATGTAAATATAACATAGAGTTATAGATTTATATTTTGTTCATAACACATAGTGTA ATATAAGTTGTATATTTTCATGTTTTTGGTTTTATGTTATCATTCATGCCACAATAAAAATAAAACAGGAGTTTATGTGCTCTTAAAAAA AAGATGTGGGTTGCCACCAACCTGTTTTTCGTTTTTGTTTTTTGTTTATTTTATTTTATTTTTTTGCATTCTCCTTTTTCAGTATTACTG >6488_6488_1_ARID4B-SOX5_ARID4B_chr1_235377084_ENST00000264183_SOX5_chr12_24048958_ENST00000546136_length(amino acids)=757AA_BP=6 MRMECERMSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQPVSLLTQETCGHRTPTSQHNTMEVDGNK VMSSFAPHNSSTSPQKAEEGGRQSGESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFG EIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLP PLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKLPGIPQGNLG AAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPAALASPSARVSTIGYLNDHDAV TKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRES RGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVD GKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEPHIKEEI -------------------------------------------------------------- >6488_6488_2_ARID4B-SOX5_ARID4B_chr1_235377084_ENST00000366603_SOX5_chr12_24048958_ENST00000546136_length(transcript)=9187nt_BP=2218nt GGCGGGGCCAGATGTTGATCTCGCTCCCACTTGTCGGGTCTGAGCCCGGAACGGGACGTGGGCAGGGGCTCTGTGGCGGGCCGGTCCTGC CCGCGGCCCACAGGCCCTCCTGGCCCCTCGGTGGCCCCCGGCCGGCCTCTCGCTCGGACGCGGCGCGTGGGGGCGCGGATTCGCTCGGCC GGGCGCCGAGGCCCTAGGGGAGAGCGGCCGGCCCTGCGCCGGACGCCGGGCTTGTTGTGAGTTTCTTCTCTGACAGAAATGGCGTCATTG TCGTAGACGGGAAACTCCGTCGGGTCTCGACAATGGGGACGGGAAGCTGCCGAGCTGTGTGCAGCTGAACCTGGTGTTTTAGAGGATACC TTGGTCCCAGAGTCATCATGAAGGCCCTTGATGAGCCTCCCTATTTGACAGTGGGCACTGATGTGAGTGCTAAATACAGAGGAGCCTTTT GTGAAGCCAAGATCAAGACAGCAAAAAGACTTGTCAAAGTCAAGGTGACATTTAGACATGATTCTTCAACAGTGGAAGTTCAGGATGACC ACATAAAGGGCCCACTAAAGGTAGGAGCTATTGTGGAAGTGAAGAATCTTGATGGTGCATATCAGGAAGCTGTTATCAATAAACTAACAG ATGCGAGTTGGTACACTGTAGTTTTTGATGACGGAGATGAGAAGACACTGAGACGATCTTCACTGTGCCTGAAAGGAGAGAGGCATTTTG CTGAAAGTGAAACATTAGACCAGCTCCCACTCACCAACCCTGAGCATTTTGGCACTCCAGTCATAGGAAAGAAAACAAATAGAGGAAGAA GATCTAATCATATACCAGAGGAAGAGTCTTCATCATCCTCCAGTGATGAAGATGAGGATGATAGGAAACAGATTGATGAGCTACTAGGCA AAGTTGTATGTGTAGATTACATTAGTTTGGATAAAAAGAAAGCACTGTGGTTTCCTGCATTGGTGGTTTGTCCTGATTGTAGTGATGAGA TTGCTGTAAAAAAGGACAATATTCTTGTTCGATCTTTCAAAGATGGAAAATTTACTTCAGTTCCAAGAAAAGATGTCCATGAAATTACTA GTGACACTGCACCAAAGCCTGATGCTGTTTTAAAGCAAGCCTTTGAACAGGCACTTGAATTTCACAAAAGTAGAACTATTCCTGCTAACT GGAAGACTGAATTGAAAGAAGATAGCTCTAGCAGTGAAGCAGAGGAAGAAGAGGAGGAGGAAGATGATGAAAAAGAAAAGGAGGATAATA GCAGTGAAGAAGAAGAAGAAATAGAACCATTTCCAGAAGAAAGGGAGAACTTTCTTCAGCAATTGTACAAATTTATGGAAGATAGAGGTA CACCTATTAACAAACGACCTGTACTTGGATATCGAAATTTGAATCTCTTTAAGTTATTCAGACTTGTACACAAACTTGGAGGATTTGATA ATATTGAAAGTGGAGCTGTTTGGAAACAAGTCTACCAAGATCTTGGAATCCCTGTCTTAAATTCAGCTGCAGGATACAATGTTAAATGTG CTTATAAAAAATACTTATATGGTTTTGAGGAGTACTGTAGATCAGCCAACATTGAATTTCAGATGGCATTGCCAGAGAAAGTTGTTAACA AGCAATGTAAGGAGTGTGAAAATGTAAAAGAAATAAAAGTTAAGGAGGAAAATGAAACAGAGATCAAAGAAATAAAGATGGAGGAGGAGA GGAATATAATACCAAGAGAAGAAAAGCCTATTGAGGATGAAATTGAAAGAAAAGAAAATATTAAGCCCTCTCTGGGAAGTAAAAAGAATT TATTAGAATCTATACCTACACATTCTGATCAGGAAAAAGAAGTTAACATTAAAAAACCAGAAGACAATGAAAATCTGGATGACAAAGATG ATGACACAACTAGGGTAGATGAATCCCTCAACATAAAGGTAGAAGCTGAGGAAGAAAAAGCAAAATCTGGAGATGAAACGAATAAAGAAG AAGATGAAGATGATGAAGAAGCAGAAGAGGAGGAGGAGGAGGAAGAAGAAGAAGAGGATGAAGATGATGATGACAACAATGAGGAAGAGG AGTTTGAGTGCTATCCACCAGGCATGAAAGTCCAAGTGCGGTATGGACGAGGGAAAAATCAAAAAATGTATGAAGCTAGTATTAAAGATT CTGATGTCGAAGGTGGAGAGGTCCTTTACTTGGTGCATTACTGCGGATGGAATGTGAGAGGATGTCTTCCAAGCGACCAGCCTCTCCGTA TGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAAGAGGAGAGTGACGGGCTCCCAGCCTTTCACCTTCC CTTGCATGTGAGTTTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACGCAAGAGACTTGTGGCCATAGGACTCC CACTTCTCAGCACAATACAATGGAAGTTGATGGCAATAAAGTTATGTCTTCATTTGCCCCACACAACTCATCTACCTCACCTCAGAAGGC AGAAGAAGGTGGGCGACAGAGTGGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCTGAACGGCGCAAGGGCAGTTTAGCTGATGTTGT TGACACCTTGAAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAAACCCCCAGTATTGAAAAACTACTCTCAAAGGACTG GAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGGCGAAATAAAAGGGACTCCCGAGAGCTTAGCTGAGAAAGAAAGGCAACTCAT GGGTATGATCAACCAGCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGCCCACGATGAGCAGAAGAAACTAGCTGCCTCTCAGATTGAGAA ACAGCGTCAGCAAATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGCAAGACAGCAGCAGCAGCTTCTACAGCAACAACACAAAATCAA TTTGCTCCAGCAACAGATCCAGGTTCAAGGTCAGCTGCCGCCATTAATGATTCCCGTATTCCCTCCTGATCAACGGACACTGGCTGCAGC TGCCCAGCAAGGATTCCTCCTCCCTCCAGGCTTCAGCTATAAGGCTGGATGTAGTGACCCTTACCCTGTTCAGCTGATCCCAACTACCAT GGCAGCTGCTGCCGCAGCAACACCAGGCTTAGGCCCACTCCAACTGCAGCAGTTATATGCTGCCCAGCTAGCTGCAATGCAGGTATCTCC AGGAGGGAAGCTGCCAGGCATACCCCAAGGCAACCTTGGTGCTGCTGTATCTCCTACCAGCATTCACACAGACAAGAGCACAAACAGCCC ACCACCCAAAAGCAAGGATGAAGTGGCACAGCCACTGAACCTATCAGCTAAACCCAAGACCTCTGATGGCAAATCACCCACATCACCCAC CTCTCCCCATATGCCAGCTCTGAGAATAAACAGTGGGGCAGGCCCCCTCAAAGCCTCTGTCCCAGCAGCGTTAGCTAGTCCTTCAGCCAG AGTTAGCACAATAGGTTACTTAAATGACCATGATGCTGTCACCAAGGCAATCCAAGAAGCTCGGCAAATGAAGGAGCAACTCCGACGGGA ACAACAGGTGCTTGATGGGAAGGTGGCTGTTGTGAATAGTCTGGGTCTCAATAACTGCCGAACAGAAAAGGAAAAAACAACACTGGAGAG TCTGACTCAGCAACTGGCAGTTAAACAGAATGAAGAAGGAAAATTTAGCCATGCAATGATGGATTTCAATCTGAGTGGAGATTCTGATGG AAGTGCTGGAGTCTCAGAGTCAAGAATTTATAGGGAATCCCGAGGGCGTGGTAGCAATGAACCCCACATAAAGCGTCCAATGAATGCCTT CATGGTGTGGGCTAAAGATGAACGGAGAAAGATCCTTCAAGCCTTTCCTGACATGCACAACTCCAACATCAGCAAGATATTGGGATCTCG CTGGAAAGCTATGACAAACCTAGAGAAACAGCCATATTATGAGGAGCAAGCCCGTCTCAGCAAGCAGCACCTGGAGAAGTACCCTGACTA TAAGTACAAGCCCAGGCCAAAGCGCACCTGCCTGGTGGATGGCAAAAAGCTGCGCATTGGTGAATACAAGGCAATCATGCGCAACAGGCG GCAGGAAATGCGGCAGTACTTCAATGTTGGGCAACAAGCACAGATCCCCATTGCCACTGCTGGTGTTGTGTACCCTGGAGCCATCGCCAT GGCTGGGATGCCCTCCCCTCACCTGCCCTCGGAGCACTCAAGCGTGTCTAGCAGCCCAGAGCCTGGGATGCCTGTTATCCAGAGCACTTA CGGTGTGAAAGGAGAGGAGCCACATATCAAAGAAGAGATACAGGCCGAGGACATCAATGGAGAAATTTATGATGAGTACGACGAGGAAGA GGATGATCCAGATGTAGATTATGGGAGTGACAGTGAAAACCATATTGCAGGACAAGCCAACTGATAAGGGTCAAAAGATTGTTGTGACCT TAGGACTTAAAGAAGCCCTAACTGGTTCATCCTTACCAGTGGCCAAGCACATTAACTTTCTCATACACTGACTGTTACTTTAACTGTTAG TCTTAAATAGTTGGGACATCAGCTGACTAATAGACCTCAGCCTCAAAAGGCTTGGAAAGAAAAAACAAATACAACAAGCAAACAACAATA TCAACAACAAGAGATTGAAATAAGCTATGGGTAAAATAATGCCAGTAATTCAGCTGCTACATCCAAGCACTGAAGTCTTACCCGTCAACT TTTTTTTTTTTTTAAATAAACTTTATGGCTGTTTGTTCTACAATGTTCTAGAAATTCTCACTCAGGTACACAGTGCCAACAAGTGGCTTG TGAATGTGTTTTGTTGTTTTGTGCTACAATTTTTAAAAAGAAAAAAGTTTTGTTTTGTTTTTTGGGGTTTCTGGGTTTTTTCCTTTTCTT TTTCTTTCCTTTCATTTTTTTTCTTTGTAATGCACCTGACAGAAAAAAAAGAAAAATGAATTTCTCTTTACTTCTCTCCACCTTCTCCAT CTCTCTACTTTAAAGATGGAAGTCTGTGCATGAGGGGAAAGAGGGAAAAAGAGCCTGTTTTTAACTTCCTTGCTATCCACCACAAAATAA GCAATTATTTTCTTTAGAGGACTTTATCTATTGCACACCACACTACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGTGTTGACCAAGT TCATTTTTTCTCTTTACTTTTTCCTTTTCCTTCTTAAGTTAGGACAGTGTTAAATCTTAGACAATCCCTTGAAAAACCTGAAATACCAGC AGCTGGTGAGATTTGACTTTTTTTTTTAATGGAAACTGTAGGTGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAGACATAAGAAATT TAGAGAAAAATATTTTCTGATCTTGGATTTTTGTGTGTATGTATGTATGTGATTATGGTACTAATAATAGGAATAACGTTGGACCATTGT GAGTTAAACCCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAATAATCTTGACCTTGACTTTGCACTTCAAATG ACAACTTAACCAAGTATAGGGCTCAGAAATTATATTTTTAAATGTCTGATTATTATTGGATGGATCAGGTGGCCCTGTGTAATAGAGGTG TGCATGTATAACATGGAAGCTACTAGCAAACTGCTCCCAGATGTCCTTTCTCCCTGGTCAGTTGGTTCCATTAACGTTTGCTACTTAGTG ATTTTTGTTTTTCCTGTTGATATTTTGAGCAAAACAATCATTGTTTTCATTGAATATATTTGGCCATTTTTTCAGACAAATAGAATTAGC TTATTTCTTCAACATTCCATCCTTTCCCGATCAGGAAATGAAACTGATGATTTTATAAGGTATTTTTCACCCCTCCATGAAGTGAGGTGG AGGCCTTTAGCATTTCAGAAGTGTGGGCCATATGTAGTTCATGCCATAAAAAGTAGGATTTAATTAAAAGTCATTGCAGCCCAATAAAAT GGAGCCTGGCTGCACCCAGGGATCCTTGCCACTGCTCTTCCCTTGCTGTCAGATTAATCCACTGAAGTCCAACTTTGGTTCAAGCAGAGT ATTTGCAAAGAGCAACAACTGAATGTGATGGGACTGCTTATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAAT AAATGCAAAATCATTTCAAGTCAATTGCCATTATTTGTATTGAAGTATCAGATAGATAGTAAATACTGCAACTAGTAGCTTGATGTGCTA TAGTTTTCACTCCAGTCATCATTTTCCTATCTCACCCCCCGAAACACCACCCTAAAGTTGGATTTTTACATATAAATAAAAAAAGAATCC CTTTTATTTTTCTCTCTCTCAGAAGACTTGCTCTGGGGTTTTGCTTGGAGGAGCTGATCATATCCTGCATGTCAGAGATTTCATTTTGTT TGTTTTTCTGTTTGTTTGTTTTTGATGACTTTATTTACATTTGAACTGCCTCTTTTTGCTAGTGTTGTAATGATGATGATGATAAAATAA TAATAATAATAGTAATAATAATAATAATGGTCAGCTGTTCCCAGATTAGTAAGTTATGTATAATTTATTTTATTTCTCCCTTTCTATTTT ATTCTGCTCTGATTTGGAAGTGCAGCCAATAAGCTGTTAGATATTTAAAACAAATTTCCATCTCCAACTCATATATGTATGTATATGTAT ATATATATATACATATATATACACACATATACACACACACACACACATTTACCCACAATTTTACTTCTCTTTCCGTAAGTTTTCTCTTTT TTAAGAATTTTGGCCCCAACAATATCAGTTCTGATGTTTAAAACAAAGGAGTGAATTAATAGGAGGGTCGTGTTCAATCTTAATTAACTT ATGCTCTCATCACTCATTTTAGTTATTTAATTGCCACAGTCATCTAGAGCCAATTTTTTTTTGTTTTTGTTTGTTTTGTTTTTAAGCACT CTGGATAAGGAAAAAATAGACACTTGTTTTTATATCATTTTTATGTACAATGTGAAAACAGATTTTTAAAAAATTTGTTCTCTGTCTTTG TTAACAAATTCCTTCCGATTTATGTGGGTTCACCTCTCACGTTTGCTGGATACTTACTTTACACCATGTTATGAAAGATGCTTTGTTTTC ATTTCATGAGTTTGGGCTACAAGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAAGGCATTCATGGCTGAAATCAATTCTAACACA CTTACCGATGAATTGACAACACTTTGGTGTTTGGTCTTTTTTTTGTTATATTTTGTTTTATTTGAAGGGGAAAACAAAATTGTTAATGGT GACTTTTAACTGCTGAAATTCAAAATTTGATTTTAGTTAGGTTTATGTCCGAGACTAAACTGTGCATGAACCGAAACAAAAAGCAAGTTC ATACCGCTGCATTCTGTTCTCTTGTTCTGACGGTTAATTCACTGGACATCAAATTTTCTTTGCCCTAGTTTTCCCCAAAAGAAAACAAAA GCAAAAATAGTTATATTAATGTTGAAAGTGCTTTGAAGTCACTTGATAAAAGGTGCTATGAATAGCAACTTACTGTGTTACTACATTGCC TTTTTGGCATTGGTTGATTTATAATTTTGGTAAAGGATCCTAAAACCCTGTATTCTTTTTCTGTGCCCCATAATGACCAAAAAAGATAAA GAAAATGAGAGTAAGATCAAAAGATCAAACTAAAACATAAACAGTCTCCTTCCTGTCTGCTTTCTTACCTATCTGTTCACACTTTATCTC TTTCCCTTTCTCTCTCTCTCTCACATGCGCGCGCGCGCGCGCGCACACACACACACACACACACTTGCCCCAACACTGAGAAATAATCTT GCCAGAATTCTGGTTTTTATAGTTGTTGTAGTCCGTTTCTCTAAAAATAGTCCTGTTTTCATATGAATCTAAGAGAACATTACCGGAGAA AATAAAGTTACTCATTTATAGTTACTAATAATAAGTTAGTGATTAACTTACCACAATTGGATAAAATATAAAACTATTCTTCAGCACATT TATACCTAAATTAGTGAAGTCCATTTGTGAAGTTCATTTGGCATCTGCAGTTAAGAGTTAACCATGTATAAAATCCCTCCCAAAGAACAT AATCATCGTTAGAACCAAATCCTCTTATAAAGAACAAATATAAAAAAGTTTTCTGTGGTGAAGCTATTTTATAGATTTGATTTCCGGAGT AGAATTTTACCTTAATTCACTTAAAGAAAATTAACCATTTTTTGGTCCAACTTCAGATATTTTCTTAATCCAGAAGCTGTGACTGTTCCC AGAAGAAACCTCTTATATCACATTTAAAACATAAAAAATAATTACACTTTCACTCATTCTAATGGGTAAATTGTTGAATTGTAATAAACA ACTGTATATTTACAAACAGGTTTATAAGGTATTTGTCTATCAAATTAATAATAAAATAAAACTTACGGGGTCTGCAAGGAAAACTATGAA GGCCACTTAAAGTGGTTCAGGTATCCCTTTGTCTTGTAGGGCATAGCTGTTGGTTTAGCCAGGCTTTTACAGTATTTAATTTTAAAGTAT CCTATAACTATCAACTTCCCAGGTTGAAGACGATGTGTTGAGTTTCCTACTGATTGATTGATTCCTGTCCTCCCCAGTGTTTCCGTCACT GGTTCACTAAAACAGTATTTATATAGCTCCACTGGCTCTAAAGCTCTTAGTCCTTCTAATATTTTGGATTTTACAAGTAAAAATGGAAAA AAAATAGAAAAGAGACAATCAAATGCCTGGAGCTTAAAACAAAGTATGTGCAACCTACCATCTCACTTGAAATTTAATAAAATAATAAGT AATTATGTAAATATAACATAGAGTTATAGATTTATATTTTGTTCATAACACATAGTGTAATATAAGTTGTATATTTTCATGTTTTTGGTT TTATGTTATCATTCATGCCACAATAAAAATAAAACAGGAGTTTATGTGCTCTTAAAAAAAAGATGTGGGTTGCCACCAACCTGTTTTTCG TTTTTGTTTTTTGTTTATTTTATTTTATTTTTTTGCATTCTCCTTTTTCAGTATTACTGCCATGCAAGGCACCAATAAAAACAGCAAATG >6488_6488_2_ARID4B-SOX5_ARID4B_chr1_235377084_ENST00000366603_SOX5_chr12_24048958_ENST00000546136_length(amino acids)=757AA_BP=6 MRMECERMSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQPVSLLTQETCGHRTPTSQHNTMEVDGNK VMSSFAPHNSSTSPQKAEEGGRQSGESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFG EIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLP PLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKLPGIPQGNLG AAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPAALASPSARVSTIGYLNDHDAV TKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRES RGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVD GKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEPHIKEEI -------------------------------------------------------------- |
Top |
Fusion Gene PPI Analysis for ARID4B-SOX5 |
![]() |
![]() |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs for ARID4B-SOX5 |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
Related Diseases for ARID4B-SOX5 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | ARID4B | C0010606 | Adenoid Cystic Carcinoma | 1 | CTD_human |
Tgene | C0004238 | Atrial Fibrillation | 1 | CTD_human | |
Tgene | C0036341 | Schizophrenia | 1 | PSYGENET | |
Tgene | C0235480 | Paroxysmal atrial fibrillation | 1 | CTD_human | |
Tgene | C1510586 | Autism Spectrum Disorders | 1 | CTD_human | |
Tgene | C2585653 | Persistent atrial fibrillation | 1 | CTD_human | |
Tgene | C3468561 | familial atrial fibrillation | 1 | CTD_human | |
Tgene | C4749915 | Developmental and speech delay due to SOX5 deficiency | 1 | ORPHANET | |
Tgene | C4755260 | 12p12.1 microdeletion syndrome | 1 | ORPHANET |