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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:SOX6-PTPRJ (FusionGDB2 ID:HG55553TG5795)

Fusion Gene Summary for SOX6-PTPRJ

check button Fusion gene summary
Fusion gene informationFusion gene name: SOX6-PTPRJ
Fusion gene ID: hg55553tg5795
HgeneTgene
Gene symbol

SOX6

PTPRJ

Gene ID

55553

5795

Gene nameSRY-box transcription factor 6protein tyrosine phosphatase receptor type J
SynonymsHSSOX6|SOXDCD148|DEP1|HPTPeta|R-PTP-ETA|SCC1
Cytomap('SOX6')('PTPRJ')

11p15.2

11p11.2

Type of geneprotein-codingprotein-coding
Descriptiontranscription factor SOX-6SRY (sex determining region Y)-box 6SRY-box 6SRY-box containing gene 6receptor-type tyrosine-protein phosphatase etaCD148 antigenDEP-1HPTP etaR-PTP-Jdensity-enhanced phosphatase 1human density enhanced phosphatase-1protein tyrosine phosphatase, receptor type, J polypeptideprotein-tyrosine phosphatase etasusceptibil
Modification date2020031320200313
UniProtAcc..
Ensembl transtripts involved in fusion geneENST00000316399, ENST00000352083, 
ENST00000396356, ENST00000527619, 
ENST00000528252, ENST00000528429, 
ENST00000533658, 
Fusion gene scores* DoF score13 X 12 X 8=12485 X 6 X 3=90
# samples 146
** MAII scorelog2(14/1248*10)=-3.15611920191728
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(6/90*10)=-0.584962500721156
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: SOX6 [Title/Abstract] AND PTPRJ [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointSOX6(16362558)-PTPRJ(48134299), # samples:4
Anticipated loss of major functional domain due to fusion event.SOX6-PTPRJ seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
SOX6-PTPRJ seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
SOX6-PTPRJ seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
SOX6-PTPRJ seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
SOX6-PTPRJ seems lost the major protein functional domain in Hgene partner, which is a transcription factor due to the frame-shifted ORF.
SOX6-PTPRJ seems lost the major protein functional domain in Tgene partner, which is a IUPHAR drug target due to the frame-shifted ORF.
SOX6-PTPRJ seems lost the major protein functional domain in Tgene partner, which is a tumor suppressor due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneSOX6

GO:0032332

positive regulation of chondrocyte differentiation

21401405

HgeneSOX6

GO:0061036

positive regulation of cartilage development

21401405

HgeneSOX6

GO:0071560

cellular response to transforming growth factor beta stimulus

21401405

HgeneSOX6

GO:2000741

positive regulation of mesenchymal stem cell differentiation

21401405

TgenePTPRJ

GO:0008285

negative regulation of cell proliferation

14709717|16682945

TgenePTPRJ

GO:0010642

negative regulation of platelet-derived growth factor receptor signaling pathway

14709717

TgenePTPRJ

GO:0030308

negative regulation of cell growth

14709717

TgenePTPRJ

GO:0030336

negative regulation of cell migration

16682945

TgenePTPRJ

GO:0035335

peptidyl-tyrosine dephosphorylation

9531590|10821867|12913111|18348712|18936167|19332538

TgenePTPRJ

GO:0043116

negative regulation of vascular permeability

19332538

TgenePTPRJ

GO:0043407

negative regulation of MAP kinase activity

19494114

TgenePTPRJ

GO:0050860

negative regulation of T cell receptor signaling pathway

12913111

TgenePTPRJ

GO:0050918

positive chemotaxis

14709717


check buttonFusion gene breakpoints across SOX6 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure
check buttonFusion gene breakpoints across PTPRJ (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4LGGTCGA-FG-5963-01ASOX6chr11

16362558

-PTPRJchr11

48134299

+
ChimerDB4LGGTCGA-FG-5963-02ASOX6chr11

16362558

-PTPRJchr11

48134299

+
ChimerDB4LGGTCGA-FG-5963SOX6chr11

16362557

-PTPRJchr11

48134298

+
ChimerDB4LGGTCGA-FG-5963SOX6chr11

16362558

-PTPRJchr11

48134299

+


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Fusion Gene ORF analysis for SOX6-PTPRJ

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-3UTRENST00000316399ENST00000526550SOX6chr11

16362558

-PTPRJchr11

48134299

+
5CDS-3UTRENST00000316399ENST00000526550SOX6chr11

16362557

-PTPRJchr11

48134298

+
5CDS-3UTRENST00000352083ENST00000526550SOX6chr11

16362558

-PTPRJchr11

48134299

+
5CDS-3UTRENST00000352083ENST00000526550SOX6chr11

16362557

-PTPRJchr11

48134298

+
5CDS-3UTRENST00000396356ENST00000526550SOX6chr11

16362558

-PTPRJchr11

48134299

+
5CDS-3UTRENST00000396356ENST00000526550SOX6chr11

16362557

-PTPRJchr11

48134298

+
5CDS-3UTRENST00000527619ENST00000526550SOX6chr11

16362558

-PTPRJchr11

48134299

+
5CDS-3UTRENST00000527619ENST00000526550SOX6chr11

16362557

-PTPRJchr11

48134298

+
5CDS-3UTRENST00000528252ENST00000526550SOX6chr11

16362558

-PTPRJchr11

48134299

+
5CDS-3UTRENST00000528252ENST00000526550SOX6chr11

16362557

-PTPRJchr11

48134298

+
5CDS-3UTRENST00000528429ENST00000526550SOX6chr11

16362558

-PTPRJchr11

48134299

+
5CDS-3UTRENST00000528429ENST00000526550SOX6chr11

16362557

-PTPRJchr11

48134298

+
5UTR-3CDSENST00000533658ENST00000418331SOX6chr11

16362558

-PTPRJchr11

48134299

+
5UTR-3CDSENST00000533658ENST00000418331SOX6chr11

16362557

-PTPRJchr11

48134298

+
5UTR-3CDSENST00000533658ENST00000440289SOX6chr11

16362558

-PTPRJchr11

48134299

+
5UTR-3CDSENST00000533658ENST00000440289SOX6chr11

16362557

-PTPRJchr11

48134298

+
5UTR-3UTRENST00000533658ENST00000526550SOX6chr11

16362558

-PTPRJchr11

48134299

+
5UTR-3UTRENST00000533658ENST00000526550SOX6chr11

16362557

-PTPRJchr11

48134298

+
Frame-shiftENST00000316399ENST00000418331SOX6chr11

16362558

-PTPRJchr11

48134299

+
Frame-shiftENST00000316399ENST00000418331SOX6chr11

16362557

-PTPRJchr11

48134298

+
Frame-shiftENST00000316399ENST00000440289SOX6chr11

16362558

-PTPRJchr11

48134299

+
Frame-shiftENST00000316399ENST00000440289SOX6chr11

16362557

-PTPRJchr11

48134298

+
Frame-shiftENST00000352083ENST00000418331SOX6chr11

16362558

-PTPRJchr11

48134299

+
Frame-shiftENST00000352083ENST00000418331SOX6chr11

16362557

-PTPRJchr11

48134298

+
Frame-shiftENST00000352083ENST00000440289SOX6chr11

16362558

-PTPRJchr11

48134299

+
Frame-shiftENST00000352083ENST00000440289SOX6chr11

16362557

-PTPRJchr11

48134298

+
Frame-shiftENST00000396356ENST00000418331SOX6chr11

16362558

-PTPRJchr11

48134299

+
Frame-shiftENST00000396356ENST00000418331SOX6chr11

16362557

-PTPRJchr11

48134298

+
Frame-shiftENST00000396356ENST00000440289SOX6chr11

16362558

-PTPRJchr11

48134299

+
Frame-shiftENST00000396356ENST00000440289SOX6chr11

16362557

-PTPRJchr11

48134298

+
Frame-shiftENST00000527619ENST00000418331SOX6chr11

16362558

-PTPRJchr11

48134299

+
Frame-shiftENST00000527619ENST00000418331SOX6chr11

16362557

-PTPRJchr11

48134298

+
Frame-shiftENST00000527619ENST00000440289SOX6chr11

16362558

-PTPRJchr11

48134299

+
Frame-shiftENST00000527619ENST00000440289SOX6chr11

16362557

-PTPRJchr11

48134298

+
In-frameENST00000528252ENST00000418331SOX6chr11

16362558

-PTPRJchr11

48134299

+
In-frameENST00000528252ENST00000418331SOX6chr11

16362557

-PTPRJchr11

48134298

+
In-frameENST00000528252ENST00000440289SOX6chr11

16362558

-PTPRJchr11

48134299

+
In-frameENST00000528252ENST00000440289SOX6chr11

16362557

-PTPRJchr11

48134298

+
In-frameENST00000528429ENST00000418331SOX6chr11

16362558

-PTPRJchr11

48134299

+
In-frameENST00000528429ENST00000418331SOX6chr11

16362557

-PTPRJchr11

48134298

+
In-frameENST00000528429ENST00000440289SOX6chr11

16362558

-PTPRJchr11

48134299

+
In-frameENST00000528429ENST00000440289SOX6chr11

16362557

-PTPRJchr11

48134298

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000528252SOX6chr1116362558-ENST00000418331PTPRJchr1148134299+508342839443261310
ENST00000528252SOX6chr1116362558-ENST00000440289PTPRJchr1148134299+31384283941932512
ENST00000528429SOX6chr1116362558-ENST00000418331PTPRJchr1148134299+496030527142031310
ENST00000528429SOX6chr1116362558-ENST00000440289PTPRJchr1148134299+30153052711809512
ENST00000528252SOX6chr1116362557-ENST00000418331PTPRJchr1148134298+508342839443261310
ENST00000528252SOX6chr1116362557-ENST00000440289PTPRJchr1148134298+31384283941932512
ENST00000528429SOX6chr1116362557-ENST00000418331PTPRJchr1148134298+496030527142031310
ENST00000528429SOX6chr1116362557-ENST00000440289PTPRJchr1148134298+30153052711809512

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000528252ENST00000418331SOX6chr1116362558-PTPRJchr1148134299+0.0006718980.99932814
ENST00000528252ENST00000440289SOX6chr1116362558-PTPRJchr1148134299+0.0007945930.9992054
ENST00000528429ENST00000418331SOX6chr1116362558-PTPRJchr1148134299+0.0006255440.99937445
ENST00000528429ENST00000440289SOX6chr1116362558-PTPRJchr1148134299+0.0008111560.99918884
ENST00000528252ENST00000418331SOX6chr1116362557-PTPRJchr1148134298+0.0006718980.99932814
ENST00000528252ENST00000440289SOX6chr1116362557-PTPRJchr1148134298+0.0007945930.9992054
ENST00000528429ENST00000418331SOX6chr1116362557-PTPRJchr1148134298+0.0006255440.99937445
ENST00000528429ENST00000440289SOX6chr1116362557-PTPRJchr1148134298+0.0008111560.99918884

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Fusion Genomic Features for SOX6-PTPRJ


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
SOX6chr1116362557-PTPRJchr1148134298+7.45E-050.9999255
SOX6chr1116362557-PTPRJchr1148134298+7.45E-050.9999255
SOX6chr1116362557-PTPRJchr1148134298+7.45E-050.9999255
SOX6chr1116362557-PTPRJchr1148134298+7.45E-050.9999255
SOX6chr1116362557-PTPRJchr1148134298+7.45E-050.9999255
SOX6chr1116362557-PTPRJchr1148134298+7.45E-050.9999255

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.
genomic feature of top 1%

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Fusion Protein Features for SOX6-PTPRJ


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr11:16362558/chr11:48134299)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
..
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgenePTPRJchr11:16362557chr11:48134298ENST000004183311251041_1298381338.0DomainTyrosine-protein phosphatase
TgenePTPRJchr11:16362557chr11:48134298ENST00000418331125121_209381338.0DomainFibronectin type-III 1
TgenePTPRJchr11:16362557chr11:48134298ENST00000418331125207_291381338.0DomainFibronectin type-III 2
TgenePTPRJchr11:16362557chr11:48134298ENST00000418331125271_364381338.0DomainFibronectin type-III 3
TgenePTPRJchr11:16362557chr11:48134298ENST00000418331125368_456381338.0DomainFibronectin type-III 4
TgenePTPRJchr11:16362557chr11:48134298ENST00000418331125457_541381338.0DomainFibronectin type-III 5
TgenePTPRJchr11:16362557chr11:48134298ENST00000418331125542_623381338.0DomainFibronectin type-III 6
TgenePTPRJchr11:16362557chr11:48134298ENST00000418331125625_720381338.0DomainFibronectin type-III 7
TgenePTPRJchr11:16362557chr11:48134298ENST00000418331125721_817381338.0DomainFibronectin type-III 8
TgenePTPRJchr11:16362557chr11:48134298ENST00000418331125816_902381338.0DomainFibronectin type-III 9
TgenePTPRJchr11:16362557chr11:48134298ENST00000440289191041_129838540.0DomainTyrosine-protein phosphatase
TgenePTPRJchr11:16362557chr11:48134298ENST0000044028919121_20938540.0DomainFibronectin type-III 1
TgenePTPRJchr11:16362557chr11:48134298ENST0000044028919207_29138540.0DomainFibronectin type-III 2
TgenePTPRJchr11:16362557chr11:48134298ENST0000044028919271_36438540.0DomainFibronectin type-III 3
TgenePTPRJchr11:16362557chr11:48134298ENST0000044028919368_45638540.0DomainFibronectin type-III 4
TgenePTPRJchr11:16362557chr11:48134298ENST0000044028919457_54138540.0DomainFibronectin type-III 5
TgenePTPRJchr11:16362557chr11:48134298ENST0000044028919542_62338540.0DomainFibronectin type-III 6
TgenePTPRJchr11:16362557chr11:48134298ENST0000044028919625_72038540.0DomainFibronectin type-III 7
TgenePTPRJchr11:16362557chr11:48134298ENST0000044028919721_81738540.0DomainFibronectin type-III 8
TgenePTPRJchr11:16362557chr11:48134298ENST0000044028919816_90238540.0DomainFibronectin type-III 9
TgenePTPRJchr11:16362558chr11:48134299ENST000004183311251041_1298381338.0DomainTyrosine-protein phosphatase
TgenePTPRJchr11:16362558chr11:48134299ENST00000418331125121_209381338.0DomainFibronectin type-III 1
TgenePTPRJchr11:16362558chr11:48134299ENST00000418331125207_291381338.0DomainFibronectin type-III 2
TgenePTPRJchr11:16362558chr11:48134299ENST00000418331125271_364381338.0DomainFibronectin type-III 3
TgenePTPRJchr11:16362558chr11:48134299ENST00000418331125368_456381338.0DomainFibronectin type-III 4
TgenePTPRJchr11:16362558chr11:48134299ENST00000418331125457_541381338.0DomainFibronectin type-III 5
TgenePTPRJchr11:16362558chr11:48134299ENST00000418331125542_623381338.0DomainFibronectin type-III 6
TgenePTPRJchr11:16362558chr11:48134299ENST00000418331125625_720381338.0DomainFibronectin type-III 7
TgenePTPRJchr11:16362558chr11:48134299ENST00000418331125721_817381338.0DomainFibronectin type-III 8
TgenePTPRJchr11:16362558chr11:48134299ENST00000418331125816_902381338.0DomainFibronectin type-III 9
TgenePTPRJchr11:16362558chr11:48134299ENST00000440289191041_129838540.0DomainTyrosine-protein phosphatase
TgenePTPRJchr11:16362558chr11:48134299ENST0000044028919121_20938540.0DomainFibronectin type-III 1
TgenePTPRJchr11:16362558chr11:48134299ENST0000044028919207_29138540.0DomainFibronectin type-III 2
TgenePTPRJchr11:16362558chr11:48134299ENST0000044028919271_36438540.0DomainFibronectin type-III 3
TgenePTPRJchr11:16362558chr11:48134299ENST0000044028919368_45638540.0DomainFibronectin type-III 4
TgenePTPRJchr11:16362558chr11:48134299ENST0000044028919457_54138540.0DomainFibronectin type-III 5
TgenePTPRJchr11:16362558chr11:48134299ENST0000044028919542_62338540.0DomainFibronectin type-III 6
TgenePTPRJchr11:16362558chr11:48134299ENST0000044028919625_72038540.0DomainFibronectin type-III 7
TgenePTPRJchr11:16362558chr11:48134299ENST0000044028919721_81738540.0DomainFibronectin type-III 8
TgenePTPRJchr11:16362558chr11:48134299ENST0000044028919816_90238540.0DomainFibronectin type-III 9
TgenePTPRJchr11:16362557chr11:48134298ENST000004183311251239_1245381338.0RegionSubstrate binding
TgenePTPRJchr11:16362557chr11:48134298ENST00000440289191239_124538540.0RegionSubstrate binding
TgenePTPRJchr11:16362558chr11:48134299ENST000004183311251239_1245381338.0RegionSubstrate binding
TgenePTPRJchr11:16362558chr11:48134299ENST00000440289191239_124538540.0RegionSubstrate binding
TgenePTPRJchr11:16362557chr11:48134298ENST0000041833112536_975381338.0Topological domainExtracellular
TgenePTPRJchr11:16362557chr11:48134298ENST00000418331125997_1337381338.0Topological domainCytoplasmic
TgenePTPRJchr11:16362557chr11:48134298ENST000004402891936_97538540.0Topological domainExtracellular
TgenePTPRJchr11:16362557chr11:48134298ENST0000044028919997_133738540.0Topological domainCytoplasmic
TgenePTPRJchr11:16362558chr11:48134299ENST0000041833112536_975381338.0Topological domainExtracellular
TgenePTPRJchr11:16362558chr11:48134299ENST00000418331125997_1337381338.0Topological domainCytoplasmic
TgenePTPRJchr11:16362558chr11:48134299ENST000004402891936_97538540.0Topological domainExtracellular
TgenePTPRJchr11:16362558chr11:48134299ENST0000044028919997_133738540.0Topological domainCytoplasmic
TgenePTPRJchr11:16362557chr11:48134298ENST00000418331125976_996381338.0TransmembraneHelical
TgenePTPRJchr11:16362557chr11:48134298ENST0000044028919976_99638540.0TransmembraneHelical
TgenePTPRJchr11:16362558chr11:48134299ENST00000418331125976_996381338.0TransmembraneHelical
TgenePTPRJchr11:16362558chr11:48134299ENST0000044028919976_99638540.0TransmembraneHelical

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSOX6chr11:16362557chr11:48134298ENST00000316399-115184_26279809.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16362557chr11:48134298ENST00000352083-216184_26279829.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16362557chr11:48134298ENST00000396356-216184_26279809.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16362557chr11:48134298ENST00000527619-215184_26282805.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16362557chr11:48134298ENST00000528252-215184_26279802.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16362557chr11:48134298ENST00000528429-216184_26279829.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16362558chr11:48134299ENST00000316399-115184_26279809.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16362558chr11:48134299ENST00000352083-216184_26279829.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16362558chr11:48134299ENST00000396356-216184_26279809.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16362558chr11:48134299ENST00000527619-215184_26282805.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16362558chr11:48134299ENST00000528252-215184_26279802.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16362558chr11:48134299ENST00000528429-216184_26279829.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16362557chr11:48134298ENST00000316399-115219_26179809.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16362557chr11:48134298ENST00000316399-115280_28579809.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362557chr11:48134298ENST00000316399-115313_31779809.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362557chr11:48134298ENST00000352083-216219_26179829.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16362557chr11:48134298ENST00000352083-216280_28579829.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362557chr11:48134298ENST00000352083-216313_31779829.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362557chr11:48134298ENST00000396356-216219_26179809.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16362557chr11:48134298ENST00000396356-216280_28579809.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362557chr11:48134298ENST00000396356-216313_31779809.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362557chr11:48134298ENST00000527619-215219_26182805.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16362557chr11:48134298ENST00000527619-215280_28582805.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362557chr11:48134298ENST00000527619-215313_31782805.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362557chr11:48134298ENST00000528252-215219_26179802.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16362557chr11:48134298ENST00000528252-215280_28579802.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362557chr11:48134298ENST00000528252-215313_31779802.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362557chr11:48134298ENST00000528429-216219_26179829.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16362557chr11:48134298ENST00000528429-216280_28579829.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362557chr11:48134298ENST00000528429-216313_31779829.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362558chr11:48134299ENST00000316399-115219_26179809.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16362558chr11:48134299ENST00000316399-115280_28579809.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362558chr11:48134299ENST00000316399-115313_31779809.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362558chr11:48134299ENST00000352083-216219_26179829.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16362558chr11:48134299ENST00000352083-216280_28579829.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362558chr11:48134299ENST00000352083-216313_31779829.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362558chr11:48134299ENST00000396356-216219_26179809.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16362558chr11:48134299ENST00000396356-216280_28579809.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362558chr11:48134299ENST00000396356-216313_31779809.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362558chr11:48134299ENST00000527619-215219_26182805.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16362558chr11:48134299ENST00000527619-215280_28582805.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362558chr11:48134299ENST00000527619-215313_31782805.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362558chr11:48134299ENST00000528252-215219_26179802.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16362558chr11:48134299ENST00000528252-215280_28579802.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362558chr11:48134299ENST00000528252-215313_31779802.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362558chr11:48134299ENST00000528429-216219_26179829.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16362558chr11:48134299ENST00000528429-216280_28579829.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362558chr11:48134299ENST00000528429-216313_31779829.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16362557chr11:48134298ENST00000316399-115621_68979809.0DNA bindingHMG box
HgeneSOX6chr11:16362557chr11:48134298ENST00000352083-216621_68979829.0DNA bindingHMG box
HgeneSOX6chr11:16362557chr11:48134298ENST00000396356-216621_68979809.0DNA bindingHMG box
HgeneSOX6chr11:16362557chr11:48134298ENST00000527619-215621_68982805.0DNA bindingHMG box
HgeneSOX6chr11:16362557chr11:48134298ENST00000528252-215621_68979802.0DNA bindingHMG box
HgeneSOX6chr11:16362557chr11:48134298ENST00000528429-216621_68979829.0DNA bindingHMG box
HgeneSOX6chr11:16362558chr11:48134299ENST00000316399-115621_68979809.0DNA bindingHMG box
HgeneSOX6chr11:16362558chr11:48134299ENST00000352083-216621_68979829.0DNA bindingHMG box
HgeneSOX6chr11:16362558chr11:48134299ENST00000396356-216621_68979809.0DNA bindingHMG box
HgeneSOX6chr11:16362558chr11:48134299ENST00000527619-215621_68982805.0DNA bindingHMG box
HgeneSOX6chr11:16362558chr11:48134299ENST00000528252-215621_68979802.0DNA bindingHMG box
HgeneSOX6chr11:16362558chr11:48134299ENST00000528429-216621_68979829.0DNA bindingHMG box


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Fusion Gene Sequence for SOX6-PTPRJ


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>85354_85354_1_SOX6-PTPRJ_SOX6_chr11_16362557_ENST00000528252_PTPRJ_chr11_48134298_ENST00000418331_length(transcript)=5083nt_BP=428nt
CCTTGGGGTTAGTTTTAGTCATATTTTTATCTCTATAAAACATCAGGCTGGGAGGTGGTGTGTGCCTGTAGTCTCAACTGCTAGGGAGCC
TGAGGCAGGAAGACTCCTTGAGCACAGGAGTTCAAGGCCAGCCTGTGCAACATAGTGAGACCCTATCACTCTGGAAAAAAAAAAAAAATC
TGCGGAGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAA
GGGAAAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTAC
CAACACTTGTCAGTACCATTCAACAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGCCCCTAGTCCAATTCCTGACCC
TTCAGTAGCAACTGTTGCCACAGGGGAAAATGGCATAACGCAGATCAGCAGTACAGCAGAATCCTTTCATAAACAGAATGGAACTGGAAC
ACCTCAGGTGGAAACAAACACCAGTGAGGATGGTGAAAGCTCTGGAGCCAACGATAGTTTAAGAACACCTGAACAAGGATCTAATGGGAC
TGATGGGGCATCTCAAAAAACTCCCAGTAGCACTGGGCCCAGTCCTGTGTTTGACATTAAAGCTGTTTCCATCAGTCCAACCAATGTGAT
CTTAACTTGGAAAAGTAATGACACAGCTGCTTCTGAGTACAAGTATGTAGTAAAGCATAAGATGGAAAATGAGAAGACAATTACTGTTGT
GCATCAACCATGGTGTAACATCACAGGCTTACGTCCAGCGACTTCATATGTATTCTCCATCACTCCAGGAATAGGCAATGAGACTTGGGG
AGATCCCAGAGTCATAAAAGTCATCACAGAGCCGATCCCAGTTTCTGATCTCCGTGTTGCCCTCACGGGTGTGAGGAAGGCTGCTCTCTC
CTGGAGCAATGGCAATGGCACTGCCTCCTGCCGGGTTCTTCTTGAAAGCATTGGAAGCCATGAGGAGTTGACTCAAGACTCAAGACTTCA
GGTCAATATCTCGGGCCTGAAGCCAGGGGTTCAATACAACATCAACCCGTATCTTCTACAATCAAATAAGACAAAGGGAGACCCCTTGGG
CACAGAAGGTGGCTTGGATGCCAGCAATACAGAGAGAAGCCGGGCAGGGAGCCCCACCGCCCCTGTGCATGATGAGTCCCTCGTGGGACC
TGTGGACCCATCCTCCGGCCAGCAGTCCCGAGACACGGAAGTCCTGCTTGTCGGGTTAGAGCCTGGCACCCGATACAATGCCACCGTTTA
TTCCCAAGCAGCGAATGGCACAGAAGGACAGCCCCAGGCCATAGAGTTCAGGACAAATGCTATTCAGGTTTTTGACGTCACCGCTGTGAA
CATCAGTGCCACAAGCCTGACCCTGATCTGGAAAGTCAGCGATAACGAGTCGTCATCTAACTATACCTACAAGATACATGTGGCGGGGGA
GACAGATTCTTCCAATCTCAACGTCAGTGAGCCTCGCGCTGTCATCCCCGGACTCCGCTCCAGCACCTTCTACAACATCACAGTGTGTCC
TGTCCTAGGTGACATCGAGGGCACGCCGGGCTTCCTCCAAGTGCACACCCCCCCTGTTCCAGTTTCTGACTTCCGAGTGACAGTGGTCAG
CACGACGGAGATCGGCTTAGCATGGAGCAGCCATGATGCAGAATCATTTCAGATGCATATCACACAGGAGGGAGCTGGCAATTCTCGGGT
AGAAATAACCACCAACCAAAGTATTATCATTGGTGGCTTGTTCCCTGGAACCAAGTATTGCTTTGAAATAGTTCCAAAAGGACCAAATGG
GACTGAAGGGGCATCTCGGACAGTTTGCAATAGAACTGTTCCCAGTGCAGTGTTTGACATCCACGTGGTCTACGTCACCACCACGGAGAT
GTGGCTGGACTGGAAGAGCCCTGACGGTGCTTCCGAGTATGTCTACCATTTAGTCATAGAGTCCAAGCATGGCTCTAACCACACAAGCAC
GTATGACAAAGCGATTACTCTCCAGGGCCTGATTCCGGGCACCTTATATAACATCACCATCTCTCCAGAAGTGGACCACGTCTGGGGGGA
CCCCAACTCCACTGCACAGTACACACGGCCCAGCAATGTGTCCAACATTGATGTAAGTACCAACACCACAGCAGCAACTTTAAGTTGGCA
GAACTTTGATGACGCCTCTCCCACGTACTCCTACTGCCTTCTTATTGAGAAGGCTGGAAATTCCAGCAACGCAACACAAGTAGTCACGGA
CATTGGAATTACTGACGCTACAGTCACTGAATTAATACCTGGCTCATCATACACAGTGGAGATCTTTGCACAAGTAGGGGATGGGATCAA
GTCACTGGAACCTGGCCGGAAGTCATTCTGTACAGATCCTGCGTCCATGGCCTCCTTCGACTGCGAAGTGGTCCCCAAAGAGCCAGCCCT
GGTTCTCAAATGGACCTGCCCTCCTGGCGCCAATGCAGGCTTTGAGCTGGAGGTCAGCAGTGGAGCCTGGAACAATGCGACCCACCTGGA
GAGCTGCTCCTCTGAGAATGGCACTGAGTATAGAACGGAAGTCACGTATTTGAATTTTTCTACCTCGTACAACATCAGCATCACCACTGT
GTCCTGTGGAAAGATGGCAGCCCCCACCCGGAACACCTGCACTACTGGCATCACAGATCCCCCTCCTCCAGATGGATCCCCTAATATTAC
ATCTGTCAGTCACAATTCAGTAAAGGTCAAGTTCAGTGGATTTGAAGCCAGCCACGGACCCATCAAAGCCTATGCTGTCATTCTCACCAC
CGGGGAAGCTGGTCACCCTTCTGCAGATGTCCTGAAATACACGTATGAGGATTTCAAAAAGGGAGCCTCAGATACTTATGTGACATACCT
CATAAGAACAGAAGAAAAGGGACGTTCTCAGAGCTTGTCTGAAGTTTTGAAATATGAAATTGACGTTGGGAATGAGTCAACCACACTTGG
TTATTACAATGGGAAGCTGGAACCTCTGGGCTCCTACCGGGCTTGTGTGGCTGGCTTCACCAACATTACCTTCCACCCTCAAAACAAGGG
GCTCATTGATGGGGCTGAGAGCTATGTGTCCTTCAGTCGCTACTCAGATGCTGTTTCCTTGCCCCAGGATCCAGGTGTCATCTGTGGAGC
GGTTTTTGGCTGTATCTTTGGTGCCCTGGTTATTGTGACTGTGGGAGGCTTCATCTTCTGGAGAAAGAAGAGGAAAGATGCAAAGAATAA
TGAAGTGTCCTTTTCTCAAATTAAACCTAAAAAATCTAAGTTAATCAGAGTGGAGAATTTTGAGGCCTACTTCAAGAAGCAGCAAGCTGA
CTCCAACTGTGGGTTCGCAGAGGAATACGAAGATCTGAAGCTTGTTGGAATTAGTCAACCTAAATATGCAGCAGAACTGGCTGAGAATAG
AGGAAAGAATCGCTATAATAATGTTCTGCCCTATGATATTTCCCGTGTCAAACTTTCGGTCCAGACCCATTCAACGGATGACTACATCAA
TGCCAACTACATGCCTGGCTACCACTCCAAGAAAGATTTTATTGCCACACAAGGACCTTTACCGAACACTTTGAAAGATTTTTGGCGTAT
GGTTTGGGAGAAAAATGTATATGCCATCATTATGTTGACTAAATGTGTTGAACAGGGAAGAACCAAATGTGAGGAGTATTGGCCCTCCAA
GCAGGCTCAGGACTATGGAGACATAACTGTGGCAATGACATCAGAAATTGTTCTTCCGGAATGGACCATCAGAGATTTCACAGTGAAAAA
TATCCAGACAAGTGAGAGTCACCCTCTGAGACAGTTCCATTTCACCTCCTGGCCAGACCACGGTGTTCCCGACACCACTGACCTGCTCAT
CAACTTCCGGTACCTCGTTCGTGACTACATGAAGCAGAGTCCTCCCGAATCGCCGATTCTGGTGCATTGCAGTGCTGGGGTCGGAAGGAC
GGGCACTTTCATTGCCATTGATCGTCTCATCTACCAGATAGAGAATGAGAACACCGTGGATGTGTATGGGATTGTGTATGACCTTCGAAT
GCATAGGCCTTTAATGGTGCAGACAGAGGACCAGTATGTTTTCCTCAATCAGTGTGTTTTGGATATTGTCAGATCCCAGAAAGACTCAAA
AGTAGATCTTATCTACCAGAACACAACTGCAATGACAATCTATGAAAACCTTGCGCCCGTGACCACATTTGGAAAGACCAATGGTTACAT
CGCCTAATTCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTA
TATGTCTAATATCTTAATTCTTTGTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGACAAATTGGGGCTG
TCGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTTTTTTTTTTTCCCCCTTGAGG
ATTGTGGAAAACCAGGAAAAGGGAGCTATGATTTTTTTTTCCAAAACAATTTCTTTTTTAAAAAAGACTATTTTATATGATTCACATGCT
AAAGCCAGGATTGTGTTGGGTTGAATATATTTTAAGTATCAGAGGTCTATTTTTACCTACTGTGTCTTGGAATCTAGCCGATGGAAAATA
CCTAATTGTGGATGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATTTGAACATGTGCCTTTTCTGAATTA
TGCTTCCACAGGCAAAACTCAGTAGAGATCTATATTTTTGTACTGAATCTCATAATTGGAATATACGGAATATTTAAACAGTAGCTTAGC
ATCAGAGGTTTGCTTCCTCAGTAACATTTCTGTTCTCATTTGATCAGGGGAGGCCTCTTTGCCCCGACTCCGCTTCCCCTGCCCCCTGTA

>85354_85354_1_SOX6-PTPRJ_SOX6_chr11_16362557_ENST00000528252_PTPRJ_chr11_48134298_ENST00000418331_length(amino acids)=1310AA_BP=11
MGQRSVISAKNAPSPIPDPSVATVATGENGITQISSTAESFHKQNGTGTPQVETNTSEDGESSGANDSLRTPEQGSNGTDGASQKTPSST
GPSPVFDIKAVSISPTNVILTWKSNDTAASEYKYVVKHKMENEKTITVVHQPWCNITGLRPATSYVFSITPGIGNETWGDPRVIKVITEP
IPVSDLRVALTGVRKAALSWSNGNGTASCRVLLESIGSHEELTQDSRLQVNISGLKPGVQYNINPYLLQSNKTKGDPLGTEGGLDASNTE
RSRAGSPTAPVHDESLVGPVDPSSGQQSRDTEVLLVGLEPGTRYNATVYSQAANGTEGQPQAIEFRTNAIQVFDVTAVNISATSLTLIWK
VSDNESSSNYTYKIHVAGETDSSNLNVSEPRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQVHTPPVPVSDFRVTVVSTTEIGLAWSSH
DAESFQMHITQEGAGNSRVEITTNQSIIIGGLFPGTKYCFEIVPKGPNGTEGASRTVCNRTVPSAVFDIHVVYVTTTEMWLDWKSPDGAS
EYVYHLVIESKHGSNHTSTYDKAITLQGLIPGTLYNITISPEVDHVWGDPNSTAQYTRPSNVSNIDVSTNTTAATLSWQNFDDASPTYSY
CLLIEKAGNSSNATQVVTDIGITDATVTELIPGSSYTVEIFAQVGDGIKSLEPGRKSFCTDPASMASFDCEVVPKEPALVLKWTCPPGAN
AGFELEVSSGAWNNATHLESCSSENGTEYRTEVTYLNFSTSYNISITTVSCGKMAAPTRNTCTTGITDPPPPDGSPNITSVSHNSVKVKF
SGFEASHGPIKAYAVILTTGEAGHPSADVLKYTYEDFKKGASDTYVTYLIRTEEKGRSQSLSEVLKYEIDVGNESTTLGYYNGKLEPLGS
YRACVAGFTNITFHPQNKGLIDGAESYVSFSRYSDAVSLPQDPGVICGAVFGCIFGALVIVTVGGFIFWRKKRKDAKNNEVSFSQIKPKK
SKLIRVENFEAYFKKQQADSNCGFAEEYEDLKLVGISQPKYAAELAENRGKNRYNNVLPYDISRVKLSVQTHSTDDYINANYMPGYHSKK
DFIATQGPLPNTLKDFWRMVWEKNVYAIIMLTKCVEQGRTKCEEYWPSKQAQDYGDITVAMTSEIVLPEWTIRDFTVKNIQTSESHPLRQ
FHFTSWPDHGVPDTTDLLINFRYLVRDYMKQSPPESPILVHCSAGVGRTGTFIAIDRLIYQIENENTVDVYGIVYDLRMHRPLMVQTEDQ

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>85354_85354_2_SOX6-PTPRJ_SOX6_chr11_16362557_ENST00000528252_PTPRJ_chr11_48134298_ENST00000440289_length(transcript)=3138nt_BP=428nt
CCTTGGGGTTAGTTTTAGTCATATTTTTATCTCTATAAAACATCAGGCTGGGAGGTGGTGTGTGCCTGTAGTCTCAACTGCTAGGGAGCC
TGAGGCAGGAAGACTCCTTGAGCACAGGAGTTCAAGGCCAGCCTGTGCAACATAGTGAGACCCTATCACTCTGGAAAAAAAAAAAAAATC
TGCGGAGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAA
GGGAAAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTAC
CAACACTTGTCAGTACCATTCAACAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGCCCCTAGTCCAATTCCTGACCC
TTCAGTAGCAACTGTTGCCACAGGGGAAAATGGCATAACGCAGATCAGCAGTACAGCAGAATCCTTTCATAAACAGAATGGAACTGGAAC
ACCTCAGGTGGAAACAAACACCAGTGAGGATGGTGAAAGCTCTGGAGCCAACGATAGTTTAAGAACACCTGAACAAGGATCTAATGGGAC
TGATGGGGCATCTCAAAAAACTCCCAGTAGCACTGGGCCCAGTCCTGTGTTTGACATTAAAGCTGTTTCCATCAGTCCAACCAATGTGAT
CTTAACTTGGAAAAGTAATGACACAGCTGCTTCTGAGTACAAGTATGTAGTAAAGCATAAGATGGAAAATGAGAAGACAATTACTGTTGT
GCATCAACCATGGTGTAACATCACAGGCTTACGTCCAGCGACTTCATATGTATTCTCCATCACTCCAGGAATAGGCAATGAGACTTGGGG
AGATCCCAGAGTCATAAAAGTCATCACAGAGCCGATCCCAGTTTCTGATCTCCGTGTTGCCCTCACGGGTGTGAGGAAGGCTGCTCTCTC
CTGGAGCAATGGCAATGGCACTGCCTCCTGCCGGGTTCTTCTTGAAAGCATTGGAAGCCATGAGGAGTTGACTCAAGACTCAAGACTTCA
GGTCAATATCTCGGGCCTGAAGCCAGGGGTTCAATACAACATCAACCCGTATCTTCTACAATCAAATAAGACAAAGGGAGACCCCTTGGG
CACAGAAGGTGGCTTGGATGCCAGCAATACAGAGAGAAGCCGGGCAGGGAGCCCCACCGCCCCTGTGCATGATGAGTCCCTCGTGGGACC
TGTGGACCCATCCTCCGGCCAGCAGTCCCGAGACACGGAAGTCCTGCTTGTCGGGTTAGAGCCTGGCACCCGATACAATGCCACCGTTTA
TTCCCAAGCAGCGAATGGCACAGAAGGACAGCCCCAGGCCATAGAGTTCAGGACAAATGCTATTCAGGTTTTTGACGTCACCGCTGTGAA
CATCAGTGCCACAAGCCTGACCCTGATCTGGAAAGTCAGCGATAACGAGTCGTCATCTAACTATACCTACAAGATACATGTGGCGGGGGA
GACAGATTCTTCCAATCTCAACGTCAGTGAGCCTCGCGCTGTCATCCCCGGACTCCGCTCCAGCACCTTCTACAACATCACAGTGTGTCC
TGTCCTAGGTGACATCGAGGGCACGCCGGGCTTCCTCCAAGTGCACACCCCCCCTGTTCCAGTTTCTGACTTCCGAGTGACAGTGGTCAG
CACGACGGAGATCGGCTTAGCATGGAGCAGCCATGATGCAGAATCATTTCAGATGCATATCACACAGGAGGGAGCTGGCAATTCTCGGGT
AGAAATAACCACCAACCAAAGTATTATCATTGGTGGCTTGTTCCCTGGAACCAAGTATTGCTTTGAAATAGTTCCAAAAGGACCAAATGG
GACTGAAGGGGCATCTCGGACAGTTTGCAATAGAACTGGATGATTTGAACACCTGCCTGGAATTCCATCATCTGAAACAGAGTTGGCAGA
TAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAAATAAAGTTTTATTGGATCACAGCCATGTTCATTTGCTTATGTA
CTGTCTATGGCTACTTTGGTGCTAGAATTGAGTAGTGGCAGCAGAGAACGTGTGGCTTGTGAAGCCTGAGATATTTATTTTCTGGCCATT
ACAGAGAATGTTTGCTGACCTCTGGGCTAGATCAGTGGTTTTCAAATTGTGGTCCAGGGCTCTCTAGGGATCCCTAGGTTCTTTCAAGGG
GTCTCCAAGGTAGTATTATCATAACAATACTAAAATGTTATTTGGCTTTTTCATTCTCATTCTCTTTTGGAGTTTTCCAACTTTGATCCG
ATATGGGATGACATTGTCTCTCAGGTCTAATGGAATATATGCTGTGGATTCTTACATTTTAAAAATTTCTTCATTTTAAATCCCTGATAT
AGTAAATATTAATAAATATAACCTATGTAAATACAAATTCTCTGAGAGCCTTAATAACTTTTAAGATGGTAAAGAAGTCCTGAGAGCAAA
AAGTTTAAGAACCTCTGGTCAAGATGTGTTAGAAATTAACTACTGTGCTGTGTTGGGCAGGTGGACTGTTCACAGTCTTTCCTAAACAAC
ACTGTGATGAGATACTTTGTTAGTTCTAGAAGGCTAATTGAAATTGATAAAATCATTTTATAGTCAGCTACGGTGGCCTGCACCCATCGT
CCCAGCTACTTGAGAGGCTGCGGCAGGAGGATTGCTTGGCCCAACAGTTGCAGACTAGCACCAGCCTGGGAGACCCTGTCTCAAAAAAAA
ATTTTTTTTTATAGAAACAGTTTAAATTATTAAATTATTTCTAGGCCTACAGGAGAAACTTCTGGGAAATCCTAGAGAGTAATGTTCATT
ATTGTTGTTTTAAAATTTTGAAATAATTGTTTTTTGGAAAGGTTGAAAAACATACAGTCTTCCTTGATCTAAGATTCAAGATAGTTGAAA
TCTTTTATACAGAGGGTAGAATAAAGATATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATAT

>85354_85354_2_SOX6-PTPRJ_SOX6_chr11_16362557_ENST00000528252_PTPRJ_chr11_48134298_ENST00000440289_length(amino acids)=512AA_BP=11
MGQRSVISAKNAPSPIPDPSVATVATGENGITQISSTAESFHKQNGTGTPQVETNTSEDGESSGANDSLRTPEQGSNGTDGASQKTPSST
GPSPVFDIKAVSISPTNVILTWKSNDTAASEYKYVVKHKMENEKTITVVHQPWCNITGLRPATSYVFSITPGIGNETWGDPRVIKVITEP
IPVSDLRVALTGVRKAALSWSNGNGTASCRVLLESIGSHEELTQDSRLQVNISGLKPGVQYNINPYLLQSNKTKGDPLGTEGGLDASNTE
RSRAGSPTAPVHDESLVGPVDPSSGQQSRDTEVLLVGLEPGTRYNATVYSQAANGTEGQPQAIEFRTNAIQVFDVTAVNISATSLTLIWK
VSDNESSSNYTYKIHVAGETDSSNLNVSEPRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQVHTPPVPVSDFRVTVVSTTEIGLAWSSH

--------------------------------------------------------------
>85354_85354_3_SOX6-PTPRJ_SOX6_chr11_16362557_ENST00000528429_PTPRJ_chr11_48134298_ENST00000418331_length(transcript)=4960nt_BP=305nt
GTTAGGAGAGACCATTGGGGATAGGAAAGATGAAAGGTCATGGTGAGCTTCAAGGACATGAAAGAAGAATGTCTTCCAAGCAAGCCACCT
CTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAAGGGAAAAGGAAGAGGGCAGTGATCAACATGTGG
CCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTACCAACACTTGTCAGTACCATTCAACAAGATGCTG
ACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGCCCCTAGTCCAATTCCTGACCCTTCAGTAGCAACTGTTGCCACAGGGGAAAATGG
CATAACGCAGATCAGCAGTACAGCAGAATCCTTTCATAAACAGAATGGAACTGGAACACCTCAGGTGGAAACAAACACCAGTGAGGATGG
TGAAAGCTCTGGAGCCAACGATAGTTTAAGAACACCTGAACAAGGATCTAATGGGACTGATGGGGCATCTCAAAAAACTCCCAGTAGCAC
TGGGCCCAGTCCTGTGTTTGACATTAAAGCTGTTTCCATCAGTCCAACCAATGTGATCTTAACTTGGAAAAGTAATGACACAGCTGCTTC
TGAGTACAAGTATGTAGTAAAGCATAAGATGGAAAATGAGAAGACAATTACTGTTGTGCATCAACCATGGTGTAACATCACAGGCTTACG
TCCAGCGACTTCATATGTATTCTCCATCACTCCAGGAATAGGCAATGAGACTTGGGGAGATCCCAGAGTCATAAAAGTCATCACAGAGCC
GATCCCAGTTTCTGATCTCCGTGTTGCCCTCACGGGTGTGAGGAAGGCTGCTCTCTCCTGGAGCAATGGCAATGGCACTGCCTCCTGCCG
GGTTCTTCTTGAAAGCATTGGAAGCCATGAGGAGTTGACTCAAGACTCAAGACTTCAGGTCAATATCTCGGGCCTGAAGCCAGGGGTTCA
ATACAACATCAACCCGTATCTTCTACAATCAAATAAGACAAAGGGAGACCCCTTGGGCACAGAAGGTGGCTTGGATGCCAGCAATACAGA
GAGAAGCCGGGCAGGGAGCCCCACCGCCCCTGTGCATGATGAGTCCCTCGTGGGACCTGTGGACCCATCCTCCGGCCAGCAGTCCCGAGA
CACGGAAGTCCTGCTTGTCGGGTTAGAGCCTGGCACCCGATACAATGCCACCGTTTATTCCCAAGCAGCGAATGGCACAGAAGGACAGCC
CCAGGCCATAGAGTTCAGGACAAATGCTATTCAGGTTTTTGACGTCACCGCTGTGAACATCAGTGCCACAAGCCTGACCCTGATCTGGAA
AGTCAGCGATAACGAGTCGTCATCTAACTATACCTACAAGATACATGTGGCGGGGGAGACAGATTCTTCCAATCTCAACGTCAGTGAGCC
TCGCGCTGTCATCCCCGGACTCCGCTCCAGCACCTTCTACAACATCACAGTGTGTCCTGTCCTAGGTGACATCGAGGGCACGCCGGGCTT
CCTCCAAGTGCACACCCCCCCTGTTCCAGTTTCTGACTTCCGAGTGACAGTGGTCAGCACGACGGAGATCGGCTTAGCATGGAGCAGCCA
TGATGCAGAATCATTTCAGATGCATATCACACAGGAGGGAGCTGGCAATTCTCGGGTAGAAATAACCACCAACCAAAGTATTATCATTGG
TGGCTTGTTCCCTGGAACCAAGTATTGCTTTGAAATAGTTCCAAAAGGACCAAATGGGACTGAAGGGGCATCTCGGACAGTTTGCAATAG
AACTGTTCCCAGTGCAGTGTTTGACATCCACGTGGTCTACGTCACCACCACGGAGATGTGGCTGGACTGGAAGAGCCCTGACGGTGCTTC
CGAGTATGTCTACCATTTAGTCATAGAGTCCAAGCATGGCTCTAACCACACAAGCACGTATGACAAAGCGATTACTCTCCAGGGCCTGAT
TCCGGGCACCTTATATAACATCACCATCTCTCCAGAAGTGGACCACGTCTGGGGGGACCCCAACTCCACTGCACAGTACACACGGCCCAG
CAATGTGTCCAACATTGATGTAAGTACCAACACCACAGCAGCAACTTTAAGTTGGCAGAACTTTGATGACGCCTCTCCCACGTACTCCTA
CTGCCTTCTTATTGAGAAGGCTGGAAATTCCAGCAACGCAACACAAGTAGTCACGGACATTGGAATTACTGACGCTACAGTCACTGAATT
AATACCTGGCTCATCATACACAGTGGAGATCTTTGCACAAGTAGGGGATGGGATCAAGTCACTGGAACCTGGCCGGAAGTCATTCTGTAC
AGATCCTGCGTCCATGGCCTCCTTCGACTGCGAAGTGGTCCCCAAAGAGCCAGCCCTGGTTCTCAAATGGACCTGCCCTCCTGGCGCCAA
TGCAGGCTTTGAGCTGGAGGTCAGCAGTGGAGCCTGGAACAATGCGACCCACCTGGAGAGCTGCTCCTCTGAGAATGGCACTGAGTATAG
AACGGAAGTCACGTATTTGAATTTTTCTACCTCGTACAACATCAGCATCACCACTGTGTCCTGTGGAAAGATGGCAGCCCCCACCCGGAA
CACCTGCACTACTGGCATCACAGATCCCCCTCCTCCAGATGGATCCCCTAATATTACATCTGTCAGTCACAATTCAGTAAAGGTCAAGTT
CAGTGGATTTGAAGCCAGCCACGGACCCATCAAAGCCTATGCTGTCATTCTCACCACCGGGGAAGCTGGTCACCCTTCTGCAGATGTCCT
GAAATACACGTATGAGGATTTCAAAAAGGGAGCCTCAGATACTTATGTGACATACCTCATAAGAACAGAAGAAAAGGGACGTTCTCAGAG
CTTGTCTGAAGTTTTGAAATATGAAATTGACGTTGGGAATGAGTCAACCACACTTGGTTATTACAATGGGAAGCTGGAACCTCTGGGCTC
CTACCGGGCTTGTGTGGCTGGCTTCACCAACATTACCTTCCACCCTCAAAACAAGGGGCTCATTGATGGGGCTGAGAGCTATGTGTCCTT
CAGTCGCTACTCAGATGCTGTTTCCTTGCCCCAGGATCCAGGTGTCATCTGTGGAGCGGTTTTTGGCTGTATCTTTGGTGCCCTGGTTAT
TGTGACTGTGGGAGGCTTCATCTTCTGGAGAAAGAAGAGGAAAGATGCAAAGAATAATGAAGTGTCCTTTTCTCAAATTAAACCTAAAAA
ATCTAAGTTAATCAGAGTGGAGAATTTTGAGGCCTACTTCAAGAAGCAGCAAGCTGACTCCAACTGTGGGTTCGCAGAGGAATACGAAGA
TCTGAAGCTTGTTGGAATTAGTCAACCTAAATATGCAGCAGAACTGGCTGAGAATAGAGGAAAGAATCGCTATAATAATGTTCTGCCCTA
TGATATTTCCCGTGTCAAACTTTCGGTCCAGACCCATTCAACGGATGACTACATCAATGCCAACTACATGCCTGGCTACCACTCCAAGAA
AGATTTTATTGCCACACAAGGACCTTTACCGAACACTTTGAAAGATTTTTGGCGTATGGTTTGGGAGAAAAATGTATATGCCATCATTAT
GTTGACTAAATGTGTTGAACAGGGAAGAACCAAATGTGAGGAGTATTGGCCCTCCAAGCAGGCTCAGGACTATGGAGACATAACTGTGGC
AATGACATCAGAAATTGTTCTTCCGGAATGGACCATCAGAGATTTCACAGTGAAAAATATCCAGACAAGTGAGAGTCACCCTCTGAGACA
GTTCCATTTCACCTCCTGGCCAGACCACGGTGTTCCCGACACCACTGACCTGCTCATCAACTTCCGGTACCTCGTTCGTGACTACATGAA
GCAGAGTCCTCCCGAATCGCCGATTCTGGTGCATTGCAGTGCTGGGGTCGGAAGGACGGGCACTTTCATTGCCATTGATCGTCTCATCTA
CCAGATAGAGAATGAGAACACCGTGGATGTGTATGGGATTGTGTATGACCTTCGAATGCATAGGCCTTTAATGGTGCAGACAGAGGACCA
GTATGTTTTCCTCAATCAGTGTGTTTTGGATATTGTCAGATCCCAGAAAGACTCAAAAGTAGATCTTATCTACCAGAACACAACTGCAAT
GACAATCTATGAAAACCTTGCGCCCGTGACCACATTTGGAAAGACCAATGGTTACATCGCCTAATTCCAAAGGAATAACCTTTCTGGAGT
GAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGTCTAATATCTTAATTCTTTGTTCTGTTTT
GTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGACAAATTGGGGCTGTCGGGGGCTGTGGATGGGTGGGGAGCAAATCAT
CTGCATTCCTGATGACCAATGGGATGAGGTCACTTTTTTTTTTTTTCCCCCTTGAGGATTGTGGAAAACCAGGAAAAGGGAGCTATGATT
TTTTTTTCCAAAACAATTTCTTTTTTAAAAAAGACTATTTTATATGATTCACATGCTAAAGCCAGGATTGTGTTGGGTTGAATATATTTT
AAGTATCAGAGGTCTATTTTTACCTACTGTGTCTTGGAATCTAGCCGATGGAAAATACCTAATTGTGGATGATGATTGCGCAGGGAGGGG
TACGTGGCACCTCTTCCGAATGGGTTTTCTATTTGAACATGTGCCTTTTCTGAATTATGCTTCCACAGGCAAAACTCAGTAGAGATCTAT
ATTTTTGTACTGAATCTCATAATTGGAATATACGGAATATTTAAACAGTAGCTTAGCATCAGAGGTTTGCTTCCTCAGTAACATTTCTGT
TCTCATTTGATCAGGGGAGGCCTCTTTGCCCCGACTCCGCTTCCCCTGCCCCCTGTACATTTGTGCTCCATTTTTTCTTCCCTTTTCCCT

>85354_85354_3_SOX6-PTPRJ_SOX6_chr11_16362557_ENST00000528429_PTPRJ_chr11_48134298_ENST00000418331_length(amino acids)=1310AA_BP=11
MGQRSVISAKNAPSPIPDPSVATVATGENGITQISSTAESFHKQNGTGTPQVETNTSEDGESSGANDSLRTPEQGSNGTDGASQKTPSST
GPSPVFDIKAVSISPTNVILTWKSNDTAASEYKYVVKHKMENEKTITVVHQPWCNITGLRPATSYVFSITPGIGNETWGDPRVIKVITEP
IPVSDLRVALTGVRKAALSWSNGNGTASCRVLLESIGSHEELTQDSRLQVNISGLKPGVQYNINPYLLQSNKTKGDPLGTEGGLDASNTE
RSRAGSPTAPVHDESLVGPVDPSSGQQSRDTEVLLVGLEPGTRYNATVYSQAANGTEGQPQAIEFRTNAIQVFDVTAVNISATSLTLIWK
VSDNESSSNYTYKIHVAGETDSSNLNVSEPRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQVHTPPVPVSDFRVTVVSTTEIGLAWSSH
DAESFQMHITQEGAGNSRVEITTNQSIIIGGLFPGTKYCFEIVPKGPNGTEGASRTVCNRTVPSAVFDIHVVYVTTTEMWLDWKSPDGAS
EYVYHLVIESKHGSNHTSTYDKAITLQGLIPGTLYNITISPEVDHVWGDPNSTAQYTRPSNVSNIDVSTNTTAATLSWQNFDDASPTYSY
CLLIEKAGNSSNATQVVTDIGITDATVTELIPGSSYTVEIFAQVGDGIKSLEPGRKSFCTDPASMASFDCEVVPKEPALVLKWTCPPGAN
AGFELEVSSGAWNNATHLESCSSENGTEYRTEVTYLNFSTSYNISITTVSCGKMAAPTRNTCTTGITDPPPPDGSPNITSVSHNSVKVKF
SGFEASHGPIKAYAVILTTGEAGHPSADVLKYTYEDFKKGASDTYVTYLIRTEEKGRSQSLSEVLKYEIDVGNESTTLGYYNGKLEPLGS
YRACVAGFTNITFHPQNKGLIDGAESYVSFSRYSDAVSLPQDPGVICGAVFGCIFGALVIVTVGGFIFWRKKRKDAKNNEVSFSQIKPKK
SKLIRVENFEAYFKKQQADSNCGFAEEYEDLKLVGISQPKYAAELAENRGKNRYNNVLPYDISRVKLSVQTHSTDDYINANYMPGYHSKK
DFIATQGPLPNTLKDFWRMVWEKNVYAIIMLTKCVEQGRTKCEEYWPSKQAQDYGDITVAMTSEIVLPEWTIRDFTVKNIQTSESHPLRQ
FHFTSWPDHGVPDTTDLLINFRYLVRDYMKQSPPESPILVHCSAGVGRTGTFIAIDRLIYQIENENTVDVYGIVYDLRMHRPLMVQTEDQ

--------------------------------------------------------------
>85354_85354_4_SOX6-PTPRJ_SOX6_chr11_16362557_ENST00000528429_PTPRJ_chr11_48134298_ENST00000440289_length(transcript)=3015nt_BP=305nt
GTTAGGAGAGACCATTGGGGATAGGAAAGATGAAAGGTCATGGTGAGCTTCAAGGACATGAAAGAAGAATGTCTTCCAAGCAAGCCACCT
CTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAAGGGAAAAGGAAGAGGGCAGTGATCAACATGTGG
CCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTACCAACACTTGTCAGTACCATTCAACAAGATGCTG
ACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGCCCCTAGTCCAATTCCTGACCCTTCAGTAGCAACTGTTGCCACAGGGGAAAATGG
CATAACGCAGATCAGCAGTACAGCAGAATCCTTTCATAAACAGAATGGAACTGGAACACCTCAGGTGGAAACAAACACCAGTGAGGATGG
TGAAAGCTCTGGAGCCAACGATAGTTTAAGAACACCTGAACAAGGATCTAATGGGACTGATGGGGCATCTCAAAAAACTCCCAGTAGCAC
TGGGCCCAGTCCTGTGTTTGACATTAAAGCTGTTTCCATCAGTCCAACCAATGTGATCTTAACTTGGAAAAGTAATGACACAGCTGCTTC
TGAGTACAAGTATGTAGTAAAGCATAAGATGGAAAATGAGAAGACAATTACTGTTGTGCATCAACCATGGTGTAACATCACAGGCTTACG
TCCAGCGACTTCATATGTATTCTCCATCACTCCAGGAATAGGCAATGAGACTTGGGGAGATCCCAGAGTCATAAAAGTCATCACAGAGCC
GATCCCAGTTTCTGATCTCCGTGTTGCCCTCACGGGTGTGAGGAAGGCTGCTCTCTCCTGGAGCAATGGCAATGGCACTGCCTCCTGCCG
GGTTCTTCTTGAAAGCATTGGAAGCCATGAGGAGTTGACTCAAGACTCAAGACTTCAGGTCAATATCTCGGGCCTGAAGCCAGGGGTTCA
ATACAACATCAACCCGTATCTTCTACAATCAAATAAGACAAAGGGAGACCCCTTGGGCACAGAAGGTGGCTTGGATGCCAGCAATACAGA
GAGAAGCCGGGCAGGGAGCCCCACCGCCCCTGTGCATGATGAGTCCCTCGTGGGACCTGTGGACCCATCCTCCGGCCAGCAGTCCCGAGA
CACGGAAGTCCTGCTTGTCGGGTTAGAGCCTGGCACCCGATACAATGCCACCGTTTATTCCCAAGCAGCGAATGGCACAGAAGGACAGCC
CCAGGCCATAGAGTTCAGGACAAATGCTATTCAGGTTTTTGACGTCACCGCTGTGAACATCAGTGCCACAAGCCTGACCCTGATCTGGAA
AGTCAGCGATAACGAGTCGTCATCTAACTATACCTACAAGATACATGTGGCGGGGGAGACAGATTCTTCCAATCTCAACGTCAGTGAGCC
TCGCGCTGTCATCCCCGGACTCCGCTCCAGCACCTTCTACAACATCACAGTGTGTCCTGTCCTAGGTGACATCGAGGGCACGCCGGGCTT
CCTCCAAGTGCACACCCCCCCTGTTCCAGTTTCTGACTTCCGAGTGACAGTGGTCAGCACGACGGAGATCGGCTTAGCATGGAGCAGCCA
TGATGCAGAATCATTTCAGATGCATATCACACAGGAGGGAGCTGGCAATTCTCGGGTAGAAATAACCACCAACCAAAGTATTATCATTGG
TGGCTTGTTCCCTGGAACCAAGTATTGCTTTGAAATAGTTCCAAAAGGACCAAATGGGACTGAAGGGGCATCTCGGACAGTTTGCAATAG
AACTGGATGATTTGAACACCTGCCTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATT
GTCTGTTTTTGTAAATAAAGTTTTATTGGATCACAGCCATGTTCATTTGCTTATGTACTGTCTATGGCTACTTTGGTGCTAGAATTGAGT
AGTGGCAGCAGAGAACGTGTGGCTTGTGAAGCCTGAGATATTTATTTTCTGGCCATTACAGAGAATGTTTGCTGACCTCTGGGCTAGATC
AGTGGTTTTCAAATTGTGGTCCAGGGCTCTCTAGGGATCCCTAGGTTCTTTCAAGGGGTCTCCAAGGTAGTATTATCATAACAATACTAA
AATGTTATTTGGCTTTTTCATTCTCATTCTCTTTTGGAGTTTTCCAACTTTGATCCGATATGGGATGACATTGTCTCTCAGGTCTAATGG
AATATATGCTGTGGATTCTTACATTTTAAAAATTTCTTCATTTTAAATCCCTGATATAGTAAATATTAATAAATATAACCTATGTAAATA
CAAATTCTCTGAGAGCCTTAATAACTTTTAAGATGGTAAAGAAGTCCTGAGAGCAAAAAGTTTAAGAACCTCTGGTCAAGATGTGTTAGA
AATTAACTACTGTGCTGTGTTGGGCAGGTGGACTGTTCACAGTCTTTCCTAAACAACACTGTGATGAGATACTTTGTTAGTTCTAGAAGG
CTAATTGAAATTGATAAAATCATTTTATAGTCAGCTACGGTGGCCTGCACCCATCGTCCCAGCTACTTGAGAGGCTGCGGCAGGAGGATT
GCTTGGCCCAACAGTTGCAGACTAGCACCAGCCTGGGAGACCCTGTCTCAAAAAAAAATTTTTTTTTATAGAAACAGTTTAAATTATTAA
ATTATTTCTAGGCCTACAGGAGAAACTTCTGGGAAATCCTAGAGAGTAATGTTCATTATTGTTGTTTTAAAATTTTGAAATAATTGTTTT
TTGGAAAGGTTGAAAAACATACAGTCTTCCTTGATCTAAGATTCAAGATAGTTGAAATCTTTTATACAGAGGGTAGAATAAAGATATACC
TAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGTAACAAACCTGCACGTTGTGCACATGTACCCT

>85354_85354_4_SOX6-PTPRJ_SOX6_chr11_16362557_ENST00000528429_PTPRJ_chr11_48134298_ENST00000440289_length(amino acids)=512AA_BP=11
MGQRSVISAKNAPSPIPDPSVATVATGENGITQISSTAESFHKQNGTGTPQVETNTSEDGESSGANDSLRTPEQGSNGTDGASQKTPSST
GPSPVFDIKAVSISPTNVILTWKSNDTAASEYKYVVKHKMENEKTITVVHQPWCNITGLRPATSYVFSITPGIGNETWGDPRVIKVITEP
IPVSDLRVALTGVRKAALSWSNGNGTASCRVLLESIGSHEELTQDSRLQVNISGLKPGVQYNINPYLLQSNKTKGDPLGTEGGLDASNTE
RSRAGSPTAPVHDESLVGPVDPSSGQQSRDTEVLLVGLEPGTRYNATVYSQAANGTEGQPQAIEFRTNAIQVFDVTAVNISATSLTLIWK
VSDNESSSNYTYKIHVAGETDSSNLNVSEPRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQVHTPPVPVSDFRVTVVSTTEIGLAWSSH

--------------------------------------------------------------
>85354_85354_5_SOX6-PTPRJ_SOX6_chr11_16362558_ENST00000528252_PTPRJ_chr11_48134299_ENST00000418331_length(transcript)=5083nt_BP=428nt
CCTTGGGGTTAGTTTTAGTCATATTTTTATCTCTATAAAACATCAGGCTGGGAGGTGGTGTGTGCCTGTAGTCTCAACTGCTAGGGAGCC
TGAGGCAGGAAGACTCCTTGAGCACAGGAGTTCAAGGCCAGCCTGTGCAACATAGTGAGACCCTATCACTCTGGAAAAAAAAAAAAAATC
TGCGGAGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAA
GGGAAAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTAC
CAACACTTGTCAGTACCATTCAACAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGCCCCTAGTCCAATTCCTGACCC
TTCAGTAGCAACTGTTGCCACAGGGGAAAATGGCATAACGCAGATCAGCAGTACAGCAGAATCCTTTCATAAACAGAATGGAACTGGAAC
ACCTCAGGTGGAAACAAACACCAGTGAGGATGGTGAAAGCTCTGGAGCCAACGATAGTTTAAGAACACCTGAACAAGGATCTAATGGGAC
TGATGGGGCATCTCAAAAAACTCCCAGTAGCACTGGGCCCAGTCCTGTGTTTGACATTAAAGCTGTTTCCATCAGTCCAACCAATGTGAT
CTTAACTTGGAAAAGTAATGACACAGCTGCTTCTGAGTACAAGTATGTAGTAAAGCATAAGATGGAAAATGAGAAGACAATTACTGTTGT
GCATCAACCATGGTGTAACATCACAGGCTTACGTCCAGCGACTTCATATGTATTCTCCATCACTCCAGGAATAGGCAATGAGACTTGGGG
AGATCCCAGAGTCATAAAAGTCATCACAGAGCCGATCCCAGTTTCTGATCTCCGTGTTGCCCTCACGGGTGTGAGGAAGGCTGCTCTCTC
CTGGAGCAATGGCAATGGCACTGCCTCCTGCCGGGTTCTTCTTGAAAGCATTGGAAGCCATGAGGAGTTGACTCAAGACTCAAGACTTCA
GGTCAATATCTCGGGCCTGAAGCCAGGGGTTCAATACAACATCAACCCGTATCTTCTACAATCAAATAAGACAAAGGGAGACCCCTTGGG
CACAGAAGGTGGCTTGGATGCCAGCAATACAGAGAGAAGCCGGGCAGGGAGCCCCACCGCCCCTGTGCATGATGAGTCCCTCGTGGGACC
TGTGGACCCATCCTCCGGCCAGCAGTCCCGAGACACGGAAGTCCTGCTTGTCGGGTTAGAGCCTGGCACCCGATACAATGCCACCGTTTA
TTCCCAAGCAGCGAATGGCACAGAAGGACAGCCCCAGGCCATAGAGTTCAGGACAAATGCTATTCAGGTTTTTGACGTCACCGCTGTGAA
CATCAGTGCCACAAGCCTGACCCTGATCTGGAAAGTCAGCGATAACGAGTCGTCATCTAACTATACCTACAAGATACATGTGGCGGGGGA
GACAGATTCTTCCAATCTCAACGTCAGTGAGCCTCGCGCTGTCATCCCCGGACTCCGCTCCAGCACCTTCTACAACATCACAGTGTGTCC
TGTCCTAGGTGACATCGAGGGCACGCCGGGCTTCCTCCAAGTGCACACCCCCCCTGTTCCAGTTTCTGACTTCCGAGTGACAGTGGTCAG
CACGACGGAGATCGGCTTAGCATGGAGCAGCCATGATGCAGAATCATTTCAGATGCATATCACACAGGAGGGAGCTGGCAATTCTCGGGT
AGAAATAACCACCAACCAAAGTATTATCATTGGTGGCTTGTTCCCTGGAACCAAGTATTGCTTTGAAATAGTTCCAAAAGGACCAAATGG
GACTGAAGGGGCATCTCGGACAGTTTGCAATAGAACTGTTCCCAGTGCAGTGTTTGACATCCACGTGGTCTACGTCACCACCACGGAGAT
GTGGCTGGACTGGAAGAGCCCTGACGGTGCTTCCGAGTATGTCTACCATTTAGTCATAGAGTCCAAGCATGGCTCTAACCACACAAGCAC
GTATGACAAAGCGATTACTCTCCAGGGCCTGATTCCGGGCACCTTATATAACATCACCATCTCTCCAGAAGTGGACCACGTCTGGGGGGA
CCCCAACTCCACTGCACAGTACACACGGCCCAGCAATGTGTCCAACATTGATGTAAGTACCAACACCACAGCAGCAACTTTAAGTTGGCA
GAACTTTGATGACGCCTCTCCCACGTACTCCTACTGCCTTCTTATTGAGAAGGCTGGAAATTCCAGCAACGCAACACAAGTAGTCACGGA
CATTGGAATTACTGACGCTACAGTCACTGAATTAATACCTGGCTCATCATACACAGTGGAGATCTTTGCACAAGTAGGGGATGGGATCAA
GTCACTGGAACCTGGCCGGAAGTCATTCTGTACAGATCCTGCGTCCATGGCCTCCTTCGACTGCGAAGTGGTCCCCAAAGAGCCAGCCCT
GGTTCTCAAATGGACCTGCCCTCCTGGCGCCAATGCAGGCTTTGAGCTGGAGGTCAGCAGTGGAGCCTGGAACAATGCGACCCACCTGGA
GAGCTGCTCCTCTGAGAATGGCACTGAGTATAGAACGGAAGTCACGTATTTGAATTTTTCTACCTCGTACAACATCAGCATCACCACTGT
GTCCTGTGGAAAGATGGCAGCCCCCACCCGGAACACCTGCACTACTGGCATCACAGATCCCCCTCCTCCAGATGGATCCCCTAATATTAC
ATCTGTCAGTCACAATTCAGTAAAGGTCAAGTTCAGTGGATTTGAAGCCAGCCACGGACCCATCAAAGCCTATGCTGTCATTCTCACCAC
CGGGGAAGCTGGTCACCCTTCTGCAGATGTCCTGAAATACACGTATGAGGATTTCAAAAAGGGAGCCTCAGATACTTATGTGACATACCT
CATAAGAACAGAAGAAAAGGGACGTTCTCAGAGCTTGTCTGAAGTTTTGAAATATGAAATTGACGTTGGGAATGAGTCAACCACACTTGG
TTATTACAATGGGAAGCTGGAACCTCTGGGCTCCTACCGGGCTTGTGTGGCTGGCTTCACCAACATTACCTTCCACCCTCAAAACAAGGG
GCTCATTGATGGGGCTGAGAGCTATGTGTCCTTCAGTCGCTACTCAGATGCTGTTTCCTTGCCCCAGGATCCAGGTGTCATCTGTGGAGC
GGTTTTTGGCTGTATCTTTGGTGCCCTGGTTATTGTGACTGTGGGAGGCTTCATCTTCTGGAGAAAGAAGAGGAAAGATGCAAAGAATAA
TGAAGTGTCCTTTTCTCAAATTAAACCTAAAAAATCTAAGTTAATCAGAGTGGAGAATTTTGAGGCCTACTTCAAGAAGCAGCAAGCTGA
CTCCAACTGTGGGTTCGCAGAGGAATACGAAGATCTGAAGCTTGTTGGAATTAGTCAACCTAAATATGCAGCAGAACTGGCTGAGAATAG
AGGAAAGAATCGCTATAATAATGTTCTGCCCTATGATATTTCCCGTGTCAAACTTTCGGTCCAGACCCATTCAACGGATGACTACATCAA
TGCCAACTACATGCCTGGCTACCACTCCAAGAAAGATTTTATTGCCACACAAGGACCTTTACCGAACACTTTGAAAGATTTTTGGCGTAT
GGTTTGGGAGAAAAATGTATATGCCATCATTATGTTGACTAAATGTGTTGAACAGGGAAGAACCAAATGTGAGGAGTATTGGCCCTCCAA
GCAGGCTCAGGACTATGGAGACATAACTGTGGCAATGACATCAGAAATTGTTCTTCCGGAATGGACCATCAGAGATTTCACAGTGAAAAA
TATCCAGACAAGTGAGAGTCACCCTCTGAGACAGTTCCATTTCACCTCCTGGCCAGACCACGGTGTTCCCGACACCACTGACCTGCTCAT
CAACTTCCGGTACCTCGTTCGTGACTACATGAAGCAGAGTCCTCCCGAATCGCCGATTCTGGTGCATTGCAGTGCTGGGGTCGGAAGGAC
GGGCACTTTCATTGCCATTGATCGTCTCATCTACCAGATAGAGAATGAGAACACCGTGGATGTGTATGGGATTGTGTATGACCTTCGAAT
GCATAGGCCTTTAATGGTGCAGACAGAGGACCAGTATGTTTTCCTCAATCAGTGTGTTTTGGATATTGTCAGATCCCAGAAAGACTCAAA
AGTAGATCTTATCTACCAGAACACAACTGCAATGACAATCTATGAAAACCTTGCGCCCGTGACCACATTTGGAAAGACCAATGGTTACAT
CGCCTAATTCCAAAGGAATAACCTTTCTGGAGTGAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTA
TATGTCTAATATCTTAATTCTTTGTTCTGTTTTGTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGACAAATTGGGGCTG
TCGGGGGCTGTGGATGGGTGGGGAGCAAATCATCTGCATTCCTGATGACCAATGGGATGAGGTCACTTTTTTTTTTTTTCCCCCTTGAGG
ATTGTGGAAAACCAGGAAAAGGGAGCTATGATTTTTTTTTCCAAAACAATTTCTTTTTTAAAAAAGACTATTTTATATGATTCACATGCT
AAAGCCAGGATTGTGTTGGGTTGAATATATTTTAAGTATCAGAGGTCTATTTTTACCTACTGTGTCTTGGAATCTAGCCGATGGAAAATA
CCTAATTGTGGATGATGATTGCGCAGGGAGGGGTACGTGGCACCTCTTCCGAATGGGTTTTCTATTTGAACATGTGCCTTTTCTGAATTA
TGCTTCCACAGGCAAAACTCAGTAGAGATCTATATTTTTGTACTGAATCTCATAATTGGAATATACGGAATATTTAAACAGTAGCTTAGC
ATCAGAGGTTTGCTTCCTCAGTAACATTTCTGTTCTCATTTGATCAGGGGAGGCCTCTTTGCCCCGACTCCGCTTCCCCTGCCCCCTGTA

>85354_85354_5_SOX6-PTPRJ_SOX6_chr11_16362558_ENST00000528252_PTPRJ_chr11_48134299_ENST00000418331_length(amino acids)=1310AA_BP=11
MGQRSVISAKNAPSPIPDPSVATVATGENGITQISSTAESFHKQNGTGTPQVETNTSEDGESSGANDSLRTPEQGSNGTDGASQKTPSST
GPSPVFDIKAVSISPTNVILTWKSNDTAASEYKYVVKHKMENEKTITVVHQPWCNITGLRPATSYVFSITPGIGNETWGDPRVIKVITEP
IPVSDLRVALTGVRKAALSWSNGNGTASCRVLLESIGSHEELTQDSRLQVNISGLKPGVQYNINPYLLQSNKTKGDPLGTEGGLDASNTE
RSRAGSPTAPVHDESLVGPVDPSSGQQSRDTEVLLVGLEPGTRYNATVYSQAANGTEGQPQAIEFRTNAIQVFDVTAVNISATSLTLIWK
VSDNESSSNYTYKIHVAGETDSSNLNVSEPRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQVHTPPVPVSDFRVTVVSTTEIGLAWSSH
DAESFQMHITQEGAGNSRVEITTNQSIIIGGLFPGTKYCFEIVPKGPNGTEGASRTVCNRTVPSAVFDIHVVYVTTTEMWLDWKSPDGAS
EYVYHLVIESKHGSNHTSTYDKAITLQGLIPGTLYNITISPEVDHVWGDPNSTAQYTRPSNVSNIDVSTNTTAATLSWQNFDDASPTYSY
CLLIEKAGNSSNATQVVTDIGITDATVTELIPGSSYTVEIFAQVGDGIKSLEPGRKSFCTDPASMASFDCEVVPKEPALVLKWTCPPGAN
AGFELEVSSGAWNNATHLESCSSENGTEYRTEVTYLNFSTSYNISITTVSCGKMAAPTRNTCTTGITDPPPPDGSPNITSVSHNSVKVKF
SGFEASHGPIKAYAVILTTGEAGHPSADVLKYTYEDFKKGASDTYVTYLIRTEEKGRSQSLSEVLKYEIDVGNESTTLGYYNGKLEPLGS
YRACVAGFTNITFHPQNKGLIDGAESYVSFSRYSDAVSLPQDPGVICGAVFGCIFGALVIVTVGGFIFWRKKRKDAKNNEVSFSQIKPKK
SKLIRVENFEAYFKKQQADSNCGFAEEYEDLKLVGISQPKYAAELAENRGKNRYNNVLPYDISRVKLSVQTHSTDDYINANYMPGYHSKK
DFIATQGPLPNTLKDFWRMVWEKNVYAIIMLTKCVEQGRTKCEEYWPSKQAQDYGDITVAMTSEIVLPEWTIRDFTVKNIQTSESHPLRQ
FHFTSWPDHGVPDTTDLLINFRYLVRDYMKQSPPESPILVHCSAGVGRTGTFIAIDRLIYQIENENTVDVYGIVYDLRMHRPLMVQTEDQ

--------------------------------------------------------------
>85354_85354_6_SOX6-PTPRJ_SOX6_chr11_16362558_ENST00000528252_PTPRJ_chr11_48134299_ENST00000440289_length(transcript)=3138nt_BP=428nt
CCTTGGGGTTAGTTTTAGTCATATTTTTATCTCTATAAAACATCAGGCTGGGAGGTGGTGTGTGCCTGTAGTCTCAACTGCTAGGGAGCC
TGAGGCAGGAAGACTCCTTGAGCACAGGAGTTCAAGGCCAGCCTGTGCAACATAGTGAGACCCTATCACTCTGGAAAAAAAAAAAAAATC
TGCGGAGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAA
GGGAAAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTAC
CAACACTTGTCAGTACCATTCAACAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGCCCCTAGTCCAATTCCTGACCC
TTCAGTAGCAACTGTTGCCACAGGGGAAAATGGCATAACGCAGATCAGCAGTACAGCAGAATCCTTTCATAAACAGAATGGAACTGGAAC
ACCTCAGGTGGAAACAAACACCAGTGAGGATGGTGAAAGCTCTGGAGCCAACGATAGTTTAAGAACACCTGAACAAGGATCTAATGGGAC
TGATGGGGCATCTCAAAAAACTCCCAGTAGCACTGGGCCCAGTCCTGTGTTTGACATTAAAGCTGTTTCCATCAGTCCAACCAATGTGAT
CTTAACTTGGAAAAGTAATGACACAGCTGCTTCTGAGTACAAGTATGTAGTAAAGCATAAGATGGAAAATGAGAAGACAATTACTGTTGT
GCATCAACCATGGTGTAACATCACAGGCTTACGTCCAGCGACTTCATATGTATTCTCCATCACTCCAGGAATAGGCAATGAGACTTGGGG
AGATCCCAGAGTCATAAAAGTCATCACAGAGCCGATCCCAGTTTCTGATCTCCGTGTTGCCCTCACGGGTGTGAGGAAGGCTGCTCTCTC
CTGGAGCAATGGCAATGGCACTGCCTCCTGCCGGGTTCTTCTTGAAAGCATTGGAAGCCATGAGGAGTTGACTCAAGACTCAAGACTTCA
GGTCAATATCTCGGGCCTGAAGCCAGGGGTTCAATACAACATCAACCCGTATCTTCTACAATCAAATAAGACAAAGGGAGACCCCTTGGG
CACAGAAGGTGGCTTGGATGCCAGCAATACAGAGAGAAGCCGGGCAGGGAGCCCCACCGCCCCTGTGCATGATGAGTCCCTCGTGGGACC
TGTGGACCCATCCTCCGGCCAGCAGTCCCGAGACACGGAAGTCCTGCTTGTCGGGTTAGAGCCTGGCACCCGATACAATGCCACCGTTTA
TTCCCAAGCAGCGAATGGCACAGAAGGACAGCCCCAGGCCATAGAGTTCAGGACAAATGCTATTCAGGTTTTTGACGTCACCGCTGTGAA
CATCAGTGCCACAAGCCTGACCCTGATCTGGAAAGTCAGCGATAACGAGTCGTCATCTAACTATACCTACAAGATACATGTGGCGGGGGA
GACAGATTCTTCCAATCTCAACGTCAGTGAGCCTCGCGCTGTCATCCCCGGACTCCGCTCCAGCACCTTCTACAACATCACAGTGTGTCC
TGTCCTAGGTGACATCGAGGGCACGCCGGGCTTCCTCCAAGTGCACACCCCCCCTGTTCCAGTTTCTGACTTCCGAGTGACAGTGGTCAG
CACGACGGAGATCGGCTTAGCATGGAGCAGCCATGATGCAGAATCATTTCAGATGCATATCACACAGGAGGGAGCTGGCAATTCTCGGGT
AGAAATAACCACCAACCAAAGTATTATCATTGGTGGCTTGTTCCCTGGAACCAAGTATTGCTTTGAAATAGTTCCAAAAGGACCAAATGG
GACTGAAGGGGCATCTCGGACAGTTTGCAATAGAACTGGATGATTTGAACACCTGCCTGGAATTCCATCATCTGAAACAGAGTTGGCAGA
TAAGAATGGCCCCTATGCCAAATTTGGCTCATTGTCTGTTTTTGTAAATAAAGTTTTATTGGATCACAGCCATGTTCATTTGCTTATGTA
CTGTCTATGGCTACTTTGGTGCTAGAATTGAGTAGTGGCAGCAGAGAACGTGTGGCTTGTGAAGCCTGAGATATTTATTTTCTGGCCATT
ACAGAGAATGTTTGCTGACCTCTGGGCTAGATCAGTGGTTTTCAAATTGTGGTCCAGGGCTCTCTAGGGATCCCTAGGTTCTTTCAAGGG
GTCTCCAAGGTAGTATTATCATAACAATACTAAAATGTTATTTGGCTTTTTCATTCTCATTCTCTTTTGGAGTTTTCCAACTTTGATCCG
ATATGGGATGACATTGTCTCTCAGGTCTAATGGAATATATGCTGTGGATTCTTACATTTTAAAAATTTCTTCATTTTAAATCCCTGATAT
AGTAAATATTAATAAATATAACCTATGTAAATACAAATTCTCTGAGAGCCTTAATAACTTTTAAGATGGTAAAGAAGTCCTGAGAGCAAA
AAGTTTAAGAACCTCTGGTCAAGATGTGTTAGAAATTAACTACTGTGCTGTGTTGGGCAGGTGGACTGTTCACAGTCTTTCCTAAACAAC
ACTGTGATGAGATACTTTGTTAGTTCTAGAAGGCTAATTGAAATTGATAAAATCATTTTATAGTCAGCTACGGTGGCCTGCACCCATCGT
CCCAGCTACTTGAGAGGCTGCGGCAGGAGGATTGCTTGGCCCAACAGTTGCAGACTAGCACCAGCCTGGGAGACCCTGTCTCAAAAAAAA
ATTTTTTTTTATAGAAACAGTTTAAATTATTAAATTATTTCTAGGCCTACAGGAGAAACTTCTGGGAAATCCTAGAGAGTAATGTTCATT
ATTGTTGTTTTAAAATTTTGAAATAATTGTTTTTTGGAAAGGTTGAAAAACATACAGTCTTCCTTGATCTAAGATTCAAGATAGTTGAAA
TCTTTTATACAGAGGGTAGAATAAAGATATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATAT

>85354_85354_6_SOX6-PTPRJ_SOX6_chr11_16362558_ENST00000528252_PTPRJ_chr11_48134299_ENST00000440289_length(amino acids)=512AA_BP=11
MGQRSVISAKNAPSPIPDPSVATVATGENGITQISSTAESFHKQNGTGTPQVETNTSEDGESSGANDSLRTPEQGSNGTDGASQKTPSST
GPSPVFDIKAVSISPTNVILTWKSNDTAASEYKYVVKHKMENEKTITVVHQPWCNITGLRPATSYVFSITPGIGNETWGDPRVIKVITEP
IPVSDLRVALTGVRKAALSWSNGNGTASCRVLLESIGSHEELTQDSRLQVNISGLKPGVQYNINPYLLQSNKTKGDPLGTEGGLDASNTE
RSRAGSPTAPVHDESLVGPVDPSSGQQSRDTEVLLVGLEPGTRYNATVYSQAANGTEGQPQAIEFRTNAIQVFDVTAVNISATSLTLIWK
VSDNESSSNYTYKIHVAGETDSSNLNVSEPRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQVHTPPVPVSDFRVTVVSTTEIGLAWSSH

--------------------------------------------------------------
>85354_85354_7_SOX6-PTPRJ_SOX6_chr11_16362558_ENST00000528429_PTPRJ_chr11_48134299_ENST00000418331_length(transcript)=4960nt_BP=305nt
GTTAGGAGAGACCATTGGGGATAGGAAAGATGAAAGGTCATGGTGAGCTTCAAGGACATGAAAGAAGAATGTCTTCCAAGCAAGCCACCT
CTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAAGGGAAAAGGAAGAGGGCAGTGATCAACATGTGG
CCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTACCAACACTTGTCAGTACCATTCAACAAGATGCTG
ACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGCCCCTAGTCCAATTCCTGACCCTTCAGTAGCAACTGTTGCCACAGGGGAAAATGG
CATAACGCAGATCAGCAGTACAGCAGAATCCTTTCATAAACAGAATGGAACTGGAACACCTCAGGTGGAAACAAACACCAGTGAGGATGG
TGAAAGCTCTGGAGCCAACGATAGTTTAAGAACACCTGAACAAGGATCTAATGGGACTGATGGGGCATCTCAAAAAACTCCCAGTAGCAC
TGGGCCCAGTCCTGTGTTTGACATTAAAGCTGTTTCCATCAGTCCAACCAATGTGATCTTAACTTGGAAAAGTAATGACACAGCTGCTTC
TGAGTACAAGTATGTAGTAAAGCATAAGATGGAAAATGAGAAGACAATTACTGTTGTGCATCAACCATGGTGTAACATCACAGGCTTACG
TCCAGCGACTTCATATGTATTCTCCATCACTCCAGGAATAGGCAATGAGACTTGGGGAGATCCCAGAGTCATAAAAGTCATCACAGAGCC
GATCCCAGTTTCTGATCTCCGTGTTGCCCTCACGGGTGTGAGGAAGGCTGCTCTCTCCTGGAGCAATGGCAATGGCACTGCCTCCTGCCG
GGTTCTTCTTGAAAGCATTGGAAGCCATGAGGAGTTGACTCAAGACTCAAGACTTCAGGTCAATATCTCGGGCCTGAAGCCAGGGGTTCA
ATACAACATCAACCCGTATCTTCTACAATCAAATAAGACAAAGGGAGACCCCTTGGGCACAGAAGGTGGCTTGGATGCCAGCAATACAGA
GAGAAGCCGGGCAGGGAGCCCCACCGCCCCTGTGCATGATGAGTCCCTCGTGGGACCTGTGGACCCATCCTCCGGCCAGCAGTCCCGAGA
CACGGAAGTCCTGCTTGTCGGGTTAGAGCCTGGCACCCGATACAATGCCACCGTTTATTCCCAAGCAGCGAATGGCACAGAAGGACAGCC
CCAGGCCATAGAGTTCAGGACAAATGCTATTCAGGTTTTTGACGTCACCGCTGTGAACATCAGTGCCACAAGCCTGACCCTGATCTGGAA
AGTCAGCGATAACGAGTCGTCATCTAACTATACCTACAAGATACATGTGGCGGGGGAGACAGATTCTTCCAATCTCAACGTCAGTGAGCC
TCGCGCTGTCATCCCCGGACTCCGCTCCAGCACCTTCTACAACATCACAGTGTGTCCTGTCCTAGGTGACATCGAGGGCACGCCGGGCTT
CCTCCAAGTGCACACCCCCCCTGTTCCAGTTTCTGACTTCCGAGTGACAGTGGTCAGCACGACGGAGATCGGCTTAGCATGGAGCAGCCA
TGATGCAGAATCATTTCAGATGCATATCACACAGGAGGGAGCTGGCAATTCTCGGGTAGAAATAACCACCAACCAAAGTATTATCATTGG
TGGCTTGTTCCCTGGAACCAAGTATTGCTTTGAAATAGTTCCAAAAGGACCAAATGGGACTGAAGGGGCATCTCGGACAGTTTGCAATAG
AACTGTTCCCAGTGCAGTGTTTGACATCCACGTGGTCTACGTCACCACCACGGAGATGTGGCTGGACTGGAAGAGCCCTGACGGTGCTTC
CGAGTATGTCTACCATTTAGTCATAGAGTCCAAGCATGGCTCTAACCACACAAGCACGTATGACAAAGCGATTACTCTCCAGGGCCTGAT
TCCGGGCACCTTATATAACATCACCATCTCTCCAGAAGTGGACCACGTCTGGGGGGACCCCAACTCCACTGCACAGTACACACGGCCCAG
CAATGTGTCCAACATTGATGTAAGTACCAACACCACAGCAGCAACTTTAAGTTGGCAGAACTTTGATGACGCCTCTCCCACGTACTCCTA
CTGCCTTCTTATTGAGAAGGCTGGAAATTCCAGCAACGCAACACAAGTAGTCACGGACATTGGAATTACTGACGCTACAGTCACTGAATT
AATACCTGGCTCATCATACACAGTGGAGATCTTTGCACAAGTAGGGGATGGGATCAAGTCACTGGAACCTGGCCGGAAGTCATTCTGTAC
AGATCCTGCGTCCATGGCCTCCTTCGACTGCGAAGTGGTCCCCAAAGAGCCAGCCCTGGTTCTCAAATGGACCTGCCCTCCTGGCGCCAA
TGCAGGCTTTGAGCTGGAGGTCAGCAGTGGAGCCTGGAACAATGCGACCCACCTGGAGAGCTGCTCCTCTGAGAATGGCACTGAGTATAG
AACGGAAGTCACGTATTTGAATTTTTCTACCTCGTACAACATCAGCATCACCACTGTGTCCTGTGGAAAGATGGCAGCCCCCACCCGGAA
CACCTGCACTACTGGCATCACAGATCCCCCTCCTCCAGATGGATCCCCTAATATTACATCTGTCAGTCACAATTCAGTAAAGGTCAAGTT
CAGTGGATTTGAAGCCAGCCACGGACCCATCAAAGCCTATGCTGTCATTCTCACCACCGGGGAAGCTGGTCACCCTTCTGCAGATGTCCT
GAAATACACGTATGAGGATTTCAAAAAGGGAGCCTCAGATACTTATGTGACATACCTCATAAGAACAGAAGAAAAGGGACGTTCTCAGAG
CTTGTCTGAAGTTTTGAAATATGAAATTGACGTTGGGAATGAGTCAACCACACTTGGTTATTACAATGGGAAGCTGGAACCTCTGGGCTC
CTACCGGGCTTGTGTGGCTGGCTTCACCAACATTACCTTCCACCCTCAAAACAAGGGGCTCATTGATGGGGCTGAGAGCTATGTGTCCTT
CAGTCGCTACTCAGATGCTGTTTCCTTGCCCCAGGATCCAGGTGTCATCTGTGGAGCGGTTTTTGGCTGTATCTTTGGTGCCCTGGTTAT
TGTGACTGTGGGAGGCTTCATCTTCTGGAGAAAGAAGAGGAAAGATGCAAAGAATAATGAAGTGTCCTTTTCTCAAATTAAACCTAAAAA
ATCTAAGTTAATCAGAGTGGAGAATTTTGAGGCCTACTTCAAGAAGCAGCAAGCTGACTCCAACTGTGGGTTCGCAGAGGAATACGAAGA
TCTGAAGCTTGTTGGAATTAGTCAACCTAAATATGCAGCAGAACTGGCTGAGAATAGAGGAAAGAATCGCTATAATAATGTTCTGCCCTA
TGATATTTCCCGTGTCAAACTTTCGGTCCAGACCCATTCAACGGATGACTACATCAATGCCAACTACATGCCTGGCTACCACTCCAAGAA
AGATTTTATTGCCACACAAGGACCTTTACCGAACACTTTGAAAGATTTTTGGCGTATGGTTTGGGAGAAAAATGTATATGCCATCATTAT
GTTGACTAAATGTGTTGAACAGGGAAGAACCAAATGTGAGGAGTATTGGCCCTCCAAGCAGGCTCAGGACTATGGAGACATAACTGTGGC
AATGACATCAGAAATTGTTCTTCCGGAATGGACCATCAGAGATTTCACAGTGAAAAATATCCAGACAAGTGAGAGTCACCCTCTGAGACA
GTTCCATTTCACCTCCTGGCCAGACCACGGTGTTCCCGACACCACTGACCTGCTCATCAACTTCCGGTACCTCGTTCGTGACTACATGAA
GCAGAGTCCTCCCGAATCGCCGATTCTGGTGCATTGCAGTGCTGGGGTCGGAAGGACGGGCACTTTCATTGCCATTGATCGTCTCATCTA
CCAGATAGAGAATGAGAACACCGTGGATGTGTATGGGATTGTGTATGACCTTCGAATGCATAGGCCTTTAATGGTGCAGACAGAGGACCA
GTATGTTTTCCTCAATCAGTGTGTTTTGGATATTGTCAGATCCCAGAAAGACTCAAAAGTAGATCTTATCTACCAGAACACAACTGCAAT
GACAATCTATGAAAACCTTGCGCCCGTGACCACATTTGGAAAGACCAATGGTTACATCGCCTAATTCCAAAGGAATAACCTTTCTGGAGT
GAACCAGACCGTCGCACCCACAGCGAAGGCACATGCCCCGATGTCGACATGTTTTTATATGTCTAATATCTTAATTCTTTGTTCTGTTTT
GTGAGAACTAATTTTGAGGGCATGAAGCTGCATATGATAGATGACAAATTGGGGCTGTCGGGGGCTGTGGATGGGTGGGGAGCAAATCAT
CTGCATTCCTGATGACCAATGGGATGAGGTCACTTTTTTTTTTTTTCCCCCTTGAGGATTGTGGAAAACCAGGAAAAGGGAGCTATGATT
TTTTTTTCCAAAACAATTTCTTTTTTAAAAAAGACTATTTTATATGATTCACATGCTAAAGCCAGGATTGTGTTGGGTTGAATATATTTT
AAGTATCAGAGGTCTATTTTTACCTACTGTGTCTTGGAATCTAGCCGATGGAAAATACCTAATTGTGGATGATGATTGCGCAGGGAGGGG
TACGTGGCACCTCTTCCGAATGGGTTTTCTATTTGAACATGTGCCTTTTCTGAATTATGCTTCCACAGGCAAAACTCAGTAGAGATCTAT
ATTTTTGTACTGAATCTCATAATTGGAATATACGGAATATTTAAACAGTAGCTTAGCATCAGAGGTTTGCTTCCTCAGTAACATTTCTGT
TCTCATTTGATCAGGGGAGGCCTCTTTGCCCCGACTCCGCTTCCCCTGCCCCCTGTACATTTGTGCTCCATTTTTTCTTCCCTTTTCCCT

>85354_85354_7_SOX6-PTPRJ_SOX6_chr11_16362558_ENST00000528429_PTPRJ_chr11_48134299_ENST00000418331_length(amino acids)=1310AA_BP=11
MGQRSVISAKNAPSPIPDPSVATVATGENGITQISSTAESFHKQNGTGTPQVETNTSEDGESSGANDSLRTPEQGSNGTDGASQKTPSST
GPSPVFDIKAVSISPTNVILTWKSNDTAASEYKYVVKHKMENEKTITVVHQPWCNITGLRPATSYVFSITPGIGNETWGDPRVIKVITEP
IPVSDLRVALTGVRKAALSWSNGNGTASCRVLLESIGSHEELTQDSRLQVNISGLKPGVQYNINPYLLQSNKTKGDPLGTEGGLDASNTE
RSRAGSPTAPVHDESLVGPVDPSSGQQSRDTEVLLVGLEPGTRYNATVYSQAANGTEGQPQAIEFRTNAIQVFDVTAVNISATSLTLIWK
VSDNESSSNYTYKIHVAGETDSSNLNVSEPRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQVHTPPVPVSDFRVTVVSTTEIGLAWSSH
DAESFQMHITQEGAGNSRVEITTNQSIIIGGLFPGTKYCFEIVPKGPNGTEGASRTVCNRTVPSAVFDIHVVYVTTTEMWLDWKSPDGAS
EYVYHLVIESKHGSNHTSTYDKAITLQGLIPGTLYNITISPEVDHVWGDPNSTAQYTRPSNVSNIDVSTNTTAATLSWQNFDDASPTYSY
CLLIEKAGNSSNATQVVTDIGITDATVTELIPGSSYTVEIFAQVGDGIKSLEPGRKSFCTDPASMASFDCEVVPKEPALVLKWTCPPGAN
AGFELEVSSGAWNNATHLESCSSENGTEYRTEVTYLNFSTSYNISITTVSCGKMAAPTRNTCTTGITDPPPPDGSPNITSVSHNSVKVKF
SGFEASHGPIKAYAVILTTGEAGHPSADVLKYTYEDFKKGASDTYVTYLIRTEEKGRSQSLSEVLKYEIDVGNESTTLGYYNGKLEPLGS
YRACVAGFTNITFHPQNKGLIDGAESYVSFSRYSDAVSLPQDPGVICGAVFGCIFGALVIVTVGGFIFWRKKRKDAKNNEVSFSQIKPKK
SKLIRVENFEAYFKKQQADSNCGFAEEYEDLKLVGISQPKYAAELAENRGKNRYNNVLPYDISRVKLSVQTHSTDDYINANYMPGYHSKK
DFIATQGPLPNTLKDFWRMVWEKNVYAIIMLTKCVEQGRTKCEEYWPSKQAQDYGDITVAMTSEIVLPEWTIRDFTVKNIQTSESHPLRQ
FHFTSWPDHGVPDTTDLLINFRYLVRDYMKQSPPESPILVHCSAGVGRTGTFIAIDRLIYQIENENTVDVYGIVYDLRMHRPLMVQTEDQ

--------------------------------------------------------------
>85354_85354_8_SOX6-PTPRJ_SOX6_chr11_16362558_ENST00000528429_PTPRJ_chr11_48134299_ENST00000440289_length(transcript)=3015nt_BP=305nt
GTTAGGAGAGACCATTGGGGATAGGAAAGATGAAAGGTCATGGTGAGCTTCAAGGACATGAAAGAAGAATGTCTTCCAAGCAAGCCACCT
CTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAAGGGAAAAGGAAGAGGGCAGTGATCAACATGTGG
CCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTACCAACACTTGTCAGTACCATTCAACAAGATGCTG
ACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGCCCCTAGTCCAATTCCTGACCCTTCAGTAGCAACTGTTGCCACAGGGGAAAATGG
CATAACGCAGATCAGCAGTACAGCAGAATCCTTTCATAAACAGAATGGAACTGGAACACCTCAGGTGGAAACAAACACCAGTGAGGATGG
TGAAAGCTCTGGAGCCAACGATAGTTTAAGAACACCTGAACAAGGATCTAATGGGACTGATGGGGCATCTCAAAAAACTCCCAGTAGCAC
TGGGCCCAGTCCTGTGTTTGACATTAAAGCTGTTTCCATCAGTCCAACCAATGTGATCTTAACTTGGAAAAGTAATGACACAGCTGCTTC
TGAGTACAAGTATGTAGTAAAGCATAAGATGGAAAATGAGAAGACAATTACTGTTGTGCATCAACCATGGTGTAACATCACAGGCTTACG
TCCAGCGACTTCATATGTATTCTCCATCACTCCAGGAATAGGCAATGAGACTTGGGGAGATCCCAGAGTCATAAAAGTCATCACAGAGCC
GATCCCAGTTTCTGATCTCCGTGTTGCCCTCACGGGTGTGAGGAAGGCTGCTCTCTCCTGGAGCAATGGCAATGGCACTGCCTCCTGCCG
GGTTCTTCTTGAAAGCATTGGAAGCCATGAGGAGTTGACTCAAGACTCAAGACTTCAGGTCAATATCTCGGGCCTGAAGCCAGGGGTTCA
ATACAACATCAACCCGTATCTTCTACAATCAAATAAGACAAAGGGAGACCCCTTGGGCACAGAAGGTGGCTTGGATGCCAGCAATACAGA
GAGAAGCCGGGCAGGGAGCCCCACCGCCCCTGTGCATGATGAGTCCCTCGTGGGACCTGTGGACCCATCCTCCGGCCAGCAGTCCCGAGA
CACGGAAGTCCTGCTTGTCGGGTTAGAGCCTGGCACCCGATACAATGCCACCGTTTATTCCCAAGCAGCGAATGGCACAGAAGGACAGCC
CCAGGCCATAGAGTTCAGGACAAATGCTATTCAGGTTTTTGACGTCACCGCTGTGAACATCAGTGCCACAAGCCTGACCCTGATCTGGAA
AGTCAGCGATAACGAGTCGTCATCTAACTATACCTACAAGATACATGTGGCGGGGGAGACAGATTCTTCCAATCTCAACGTCAGTGAGCC
TCGCGCTGTCATCCCCGGACTCCGCTCCAGCACCTTCTACAACATCACAGTGTGTCCTGTCCTAGGTGACATCGAGGGCACGCCGGGCTT
CCTCCAAGTGCACACCCCCCCTGTTCCAGTTTCTGACTTCCGAGTGACAGTGGTCAGCACGACGGAGATCGGCTTAGCATGGAGCAGCCA
TGATGCAGAATCATTTCAGATGCATATCACACAGGAGGGAGCTGGCAATTCTCGGGTAGAAATAACCACCAACCAAAGTATTATCATTGG
TGGCTTGTTCCCTGGAACCAAGTATTGCTTTGAAATAGTTCCAAAAGGACCAAATGGGACTGAAGGGGCATCTCGGACAGTTTGCAATAG
AACTGGATGATTTGAACACCTGCCTGGAATTCCATCATCTGAAACAGAGTTGGCAGATAAGAATGGCCCCTATGCCAAATTTGGCTCATT
GTCTGTTTTTGTAAATAAAGTTTTATTGGATCACAGCCATGTTCATTTGCTTATGTACTGTCTATGGCTACTTTGGTGCTAGAATTGAGT
AGTGGCAGCAGAGAACGTGTGGCTTGTGAAGCCTGAGATATTTATTTTCTGGCCATTACAGAGAATGTTTGCTGACCTCTGGGCTAGATC
AGTGGTTTTCAAATTGTGGTCCAGGGCTCTCTAGGGATCCCTAGGTTCTTTCAAGGGGTCTCCAAGGTAGTATTATCATAACAATACTAA
AATGTTATTTGGCTTTTTCATTCTCATTCTCTTTTGGAGTTTTCCAACTTTGATCCGATATGGGATGACATTGTCTCTCAGGTCTAATGG
AATATATGCTGTGGATTCTTACATTTTAAAAATTTCTTCATTTTAAATCCCTGATATAGTAAATATTAATAAATATAACCTATGTAAATA
CAAATTCTCTGAGAGCCTTAATAACTTTTAAGATGGTAAAGAAGTCCTGAGAGCAAAAAGTTTAAGAACCTCTGGTCAAGATGTGTTAGA
AATTAACTACTGTGCTGTGTTGGGCAGGTGGACTGTTCACAGTCTTTCCTAAACAACACTGTGATGAGATACTTTGTTAGTTCTAGAAGG
CTAATTGAAATTGATAAAATCATTTTATAGTCAGCTACGGTGGCCTGCACCCATCGTCCCAGCTACTTGAGAGGCTGCGGCAGGAGGATT
GCTTGGCCCAACAGTTGCAGACTAGCACCAGCCTGGGAGACCCTGTCTCAAAAAAAAATTTTTTTTTATAGAAACAGTTTAAATTATTAA
ATTATTTCTAGGCCTACAGGAGAAACTTCTGGGAAATCCTAGAGAGTAATGTTCATTATTGTTGTTTTAAAATTTTGAAATAATTGTTTT
TTGGAAAGGTTGAAAAACATACAGTCTTCCTTGATCTAAGATTCAAGATAGTTGAAATCTTTTATACAGAGGGTAGAATAAAGATATACC
TAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGTAACAAACCTGCACGTTGTGCACATGTACCCT

>85354_85354_8_SOX6-PTPRJ_SOX6_chr11_16362558_ENST00000528429_PTPRJ_chr11_48134299_ENST00000440289_length(amino acids)=512AA_BP=11
MGQRSVISAKNAPSPIPDPSVATVATGENGITQISSTAESFHKQNGTGTPQVETNTSEDGESSGANDSLRTPEQGSNGTDGASQKTPSST
GPSPVFDIKAVSISPTNVILTWKSNDTAASEYKYVVKHKMENEKTITVVHQPWCNITGLRPATSYVFSITPGIGNETWGDPRVIKVITEP
IPVSDLRVALTGVRKAALSWSNGNGTASCRVLLESIGSHEELTQDSRLQVNISGLKPGVQYNINPYLLQSNKTKGDPLGTEGGLDASNTE
RSRAGSPTAPVHDESLVGPVDPSSGQQSRDTEVLLVGLEPGTRYNATVYSQAANGTEGQPQAIEFRTNAIQVFDVTAVNISATSLTLIWK
VSDNESSSNYTYKIHVAGETDSSNLNVSEPRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQVHTPPVPVSDFRVTVVSTTEIGLAWSSH

--------------------------------------------------------------

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Fusion Gene PPI Analysis for SOX6-PTPRJ


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for SOX6-PTPRJ


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for SOX6-PTPRJ


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneSOX6C3495676Anorectal Malformations1GENOMICS_ENGLAND
TgeneC0009405Hereditary Nonpolyposis Colorectal Neoplasms1CLINGEN
TgeneC0040034Thrombocytopenia1GENOMICS_ENGLAND
TgeneC1112155Hereditary non-polyposis colorectal cancer syndrome1CLINGEN
TgeneC1333990Hereditary Nonpolyposis Colorectal Cancer1CLINGEN
TgeneC1333991Hereditary Non-Polyposis Colon Cancer Type 21CLINGEN
TgeneC2936783Colorectal cancer, hereditary nonpolyposis, type 11CLINGEN