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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:EVA1C-CBR3 (FusionGDB2 ID:HG59271TG874) |
Fusion Gene Summary for EVA1C-CBR3 |
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Fusion gene information | Fusion gene name: EVA1C-CBR3 | Fusion gene ID: hg59271tg874 | Hgene | Tgene | Gene symbol | EVA1C | CBR3 | Gene ID | 59271 | 874 |
Gene name | eva-1 homolog C | carbonyl reductase 3 | |
Synonyms | B18|B19|C21orf63|C21orf64|FAM176C|PRED34|SUE21 | HEL-S-25|SDR21C2|hCBR3 | |
Cytomap | ('C21orf63','EVA1C')('CBR3','CBR3') 21q22.11 | 21q22.12 | |
Type of gene | protein-coding | protein-coding | |
Description | protein eva-1 homolog Cfamily with sequence similarity 176, member Cprotein FAM176C | carbonyl reductase [NADPH] 3NADPH-dependent carbonyl reductase 3carbonyl reductase (NADPH) 3epididymis secretory protein Li 25short chain dehydrogenase/reductase family 21C member 2 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000300255, ENST00000382699, ENST00000401402, ENST00000485488, | ||
Fusion gene scores | * DoF score | 12 X 7 X 8=672 | 3 X 3 X 4=36 |
# samples | 13 | 5 | |
** MAII score | log2(13/672*10)=-2.36994960975031 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/36*10)=0.473931188332412 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: EVA1C [Title/Abstract] AND CBR3 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | EVA1C(33825816)-CBR3(37518374), # samples:2 C21orf63(33825816)-CBR3(37518374), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | EVA1C-CBR3 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. EVA1C-CBR3 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. EVA1C-CBR3 seems lost the major protein functional domain in Tgene partner, which is a cell metabolism gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | PRAD | TCGA-KK-A6E1-01A | C21orf63 | chr21 | 33825816 | - | CBR3 | chr21 | 37518374 | + |
ChimerDB4 | PRAD | TCGA-KK-A6E1-01A | EVA1C | chr21 | 33825816 | + | CBR3 | chr21 | 37518374 | + |
ChimerDB4 | PRAD | TCGA-KK-A6E1 | EVA1C | chr21 | 33785321 | + | CBR3 | chr21 | 37518374 | + |
ChimerDB4 | PRAD | TCGA-KK-A6E1 | EVA1C | chr21 | 33825816 | + | CBR3 | chr21 | 37518374 | + |
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Fusion Gene ORF analysis for EVA1C-CBR3 |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000300255 | ENST00000290354 | EVA1C | chr21 | 33785321 | + | CBR3 | chr21 | 37518374 | + |
Frame-shift | ENST00000382699 | ENST00000290354 | EVA1C | chr21 | 33785321 | + | CBR3 | chr21 | 37518374 | + |
Frame-shift | ENST00000401402 | ENST00000290354 | EVA1C | chr21 | 33785321 | + | CBR3 | chr21 | 37518374 | + |
In-frame | ENST00000300255 | ENST00000290354 | EVA1C | chr21 | 33825816 | + | CBR3 | chr21 | 37518374 | + |
In-frame | ENST00000382699 | ENST00000290354 | EVA1C | chr21 | 33825816 | + | CBR3 | chr21 | 37518374 | + |
In-frame | ENST00000401402 | ENST00000290354 | EVA1C | chr21 | 33825816 | + | CBR3 | chr21 | 37518374 | + |
intron-3CDS | ENST00000485488 | ENST00000290354 | EVA1C | chr21 | 33825816 | + | CBR3 | chr21 | 37518374 | + |
intron-3CDS | ENST00000485488 | ENST00000290354 | EVA1C | chr21 | 33785321 | + | CBR3 | chr21 | 37518374 | + |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000300255 | EVA1C | chr21 | 33825816 | + | ENST00000290354 | CBR3 | chr21 | 37518374 | + | 1321 | 830 | 614 | 96 | 172 |
ENST00000401402 | EVA1C | chr21 | 33825816 | + | ENST00000290354 | CBR3 | chr21 | 37518374 | + | 1017 | 526 | 501 | 962 | 153 |
ENST00000382699 | EVA1C | chr21 | 33825816 | + | ENST00000290354 | CBR3 | chr21 | 37518374 | + | 1000 | 509 | 484 | 945 | 153 |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000300255 | ENST00000290354 | EVA1C | chr21 | 33825816 | + | CBR3 | chr21 | 37518374 | + | 0.26007894 | 0.7399211 |
ENST00000401402 | ENST00000290354 | EVA1C | chr21 | 33825816 | + | CBR3 | chr21 | 37518374 | + | 0.24309617 | 0.7569038 |
ENST00000382699 | ENST00000290354 | EVA1C | chr21 | 33825816 | + | CBR3 | chr21 | 37518374 | + | 0.15871021 | 0.84128976 |
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Fusion Genomic Features for EVA1C-CBR3 |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
EVA1C | chr21 | 33825816 | + | CBR3 | chr21 | 37518373 | + | 4.91E-06 | 0.9999951 |
EVA1C | chr21 | 33825816 | + | CBR3 | chr21 | 37518373 | + | 4.91E-06 | 0.9999951 |
EVA1C | chr21 | 33785321 | + | CBR3 | chr21 | 37518373 | + | 8.02E-08 | 0.9999999 |
EVA1C | chr21 | 33825816 | + | CBR3 | chr21 | 37518373 | + | 4.91E-06 | 0.9999951 |
EVA1C | chr21 | 33825816 | + | CBR3 | chr21 | 37518373 | + | 4.91E-06 | 0.9999951 |
EVA1C | chr21 | 33785321 | + | CBR3 | chr21 | 37518373 | + | 8.02E-08 | 0.9999999 |
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Fusion Protein Features for EVA1C-CBR3 |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr21:33825816/chr21:37518374) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | CBR3 | chr21:33825816 | chr21:37518374 | ENST00000290354 | 1 | 3 | 194_198 | 132 | 278.0 | Nucleotide binding | NADP |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | EVA1C | chr21:33825816 | chr21:37518374 | ENST00000300255 | + | 2 | 8 | 373_379 | 119 | 442.0 | Compositional bias | Note=Poly-Glu |
Hgene | EVA1C | chr21:33825816 | chr21:37518374 | ENST00000300255 | + | 2 | 8 | 168_260 | 119 | 442.0 | Domain | SUEL-type lectin 2 |
Hgene | EVA1C | chr21:33825816 | chr21:37518374 | ENST00000300255 | + | 2 | 8 | 67_159 | 119 | 442.0 | Domain | SUEL-type lectin 1 |
Hgene | EVA1C | chr21:33825816 | chr21:37518374 | ENST00000300255 | + | 2 | 8 | 344_441 | 119 | 442.0 | Topological domain | Cytoplasmic |
Hgene | EVA1C | chr21:33825816 | chr21:37518374 | ENST00000300255 | + | 2 | 8 | 49_322 | 119 | 442.0 | Topological domain | Extracellular |
Hgene | EVA1C | chr21:33825816 | chr21:37518374 | ENST00000300255 | + | 2 | 8 | 323_343 | 119 | 442.0 | Transmembrane | Helical |
Tgene | CBR3 | chr21:33825816 | chr21:37518374 | ENST00000290354 | 1 | 3 | 10_34 | 132 | 278.0 | Nucleotide binding | NADP | |
Tgene | CBR3 | chr21:33825816 | chr21:37518374 | ENST00000290354 | 1 | 3 | 38_42 | 132 | 278.0 | Nucleotide binding | NADP | |
Tgene | CBR3 | chr21:33825816 | chr21:37518374 | ENST00000290354 | 1 | 3 | 63_64 | 132 | 278.0 | Nucleotide binding | NADP |
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Fusion Gene Sequence for EVA1C-CBR3 |
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>27757_27757_1_EVA1C-CBR3_EVA1C_chr21_33825816_ENST00000300255_CBR3_chr21_37518374_ENST00000290354_length(transcript)=1321nt_BP=830nt GGGCGAGGCTGGCACCCGGCCAGCGCGGGCAGGGCCACGGGTGCCCGGCTGTTTCCCGGGTGTGGAAGGCGCTCAAGGTGCGCGGCCCGG GGCGCGCTACTGGGGGCGCCCTCCGCGGTGGGCAGCGCGCCAGGGATCGGCCTGGGCAGCCGCGGGGCGCGCGAAGGCTGCGCTTTCCCT ACGGCCCCCCTCGCTTCCTCCGGCACGGCGGCAACGGAGATTTCCTCTCGGGGAAACTACGCGGATCCTTTTCGGGGATCCTCGCCCCGC CCCAGTTCTCCGCCCCCTCCCCTTTGCTGGGGCGCCTGGGCTGGCCCGCGCAGGGGAGGAGGCTCTGGCAGCCTGGGCAGGGAGGCGGCG GGGGGCCGCGGAGCCGCTGGCCATCGATTCTCCCCGCCATGTGACGCCGTCCTTAGCCCTGCGACCCCCAGCGCGTCCCGGGCCTGCGCC TCCGCCCCGCCGCGCAGCGCACGATGCTTCTGCCGGGACGCGCACGCCAACCGCCGACGCCCCAGCCCGTGCAGCATCCCGGCCTCCGCC GGCAGGTAGAGCCGCCGGGGCAGCTCCTGCGCCTCTTCTACTGCACTGTCCTGGTCTGCTCCAAAGAGATCTCAGCGCTCACCGACTTCT CTGGTTACCTAACCAAACTCCTGCAAAACCACACCACCTATGCCTGTGATGGGGACTATTTGAATCTACAGTGCCCTCGGCATTCTACGA TAAGTGTCCAATCGGCATTTTATGGGCAAGATTACCAAATGTGTAGTTCCCAGAAGCCTGCCTCCCAGAGGGAAGACAGCTTAACCTGTG TGGCAGCCACCACCTTCCAGGGAGAGTGGTGAATATCAGTAGTTTGCAGTGTTTAAGGGCTTTTGAAAACTGCAGTGAAGATCTGCAGGA AAGGTTCCACAGTGAGACACTCACAGAAGGAGACCTGGTGGATCTCATGAAAAAGTTTGTGGAGGACACAAAAAATGAGGTGCATGAGAG GGAAGGCTGGCCCAACTCACCTTATGGGGTGTCCAAGTTGGGGGTCACGGTCTTATCGAGGATCCTGGCCAGGCGTCTGGATGAGAAGAG GAAAGCTGACAGGATTCTGGTGAATGCGTGCTGCCCAGGACCAGTGAAGACAGACATGGATGGGAAAGACAGCATCAGGACTGTGGAGGA GGGGGCTGAGACCCCTGTCTACTTGGCCCTCTTGCCTCCAGATGCCACTGAGCCACAAGGCCAGTTGGTCCATGACAAAGTTGTGCAAAA CTGGTAAACGTCTGCTTCGGAGCTTGCTGCTTAATAAATGTTGGTGGAATGAATGAATGAA >27757_27757_1_EVA1C-CBR3_EVA1C_chr21_33825816_ENST00000300255_CBR3_chr21_37518374_ENST00000290354_length(amino acids)=172AA_BP= MRSLWSRPGQCSRRGAGAAPAALPAGGGRDAARAGASAVGVRVPAEASCAARRGGGAGPGRAGGRRAKDGVTWRGESMASGSAAPRRLPA QAARASSPARASPGAPAKGRGRRTGAGRGSPKRIRVVSPRGNLRCRRAGGSEGGRRESAAFARPAAAQADPWRAAHRGGRPQ -------------------------------------------------------------- >27757_27757_2_EVA1C-CBR3_EVA1C_chr21_33825816_ENST00000382699_CBR3_chr21_37518374_ENST00000290354_length(transcript)=1000nt_BP=509nt AGGGGAGGAGGCTCTGGCAGCCTGGGCAGGGAGGCGGCGGGGGGCCGCGGAGCCGCTGGCCATCGATTCTCCCCGCCATGTGACGCCGTC CTTAGCCCTGCGACCCCCAGCGCGTCCCGGGCCTGCGCCTCCGCCCCGCCGCGCAGCGCACGATGCTTCTGCCGGGACGCGCACGCCAAC CGCCGACGCCCCAGCCCGTGCAGCATCCCGGCCTCCGCCGGCAGGTAGAGCCGCCGGGGCAGCTCCTGCGCCTCTTCTACTGCACTGTCC TGGTCTGCTCCAAAGAGATCTCAGCGCTCACCGACTTCTCTGGTTACCTAACCAAACTCCTGCAAAACCACACCACCTATGCCTGTGATG GGGACTATTTGAATCTACAGTGCCCTCGGCATTCTACGATAAGTGTCCAATCGGCATTTTATGGGCAAGATTACCAAATGTGTAGTTCCC AGAAGCCTGCCTCCCAGAGGGAAGACAGCTTAACCTGTGTGGCAGCCACCACCTTCCAGGGAGAGTGGTGAATATCAGTAGTTTGCAGTG TTTAAGGGCTTTTGAAAACTGCAGTGAAGATCTGCAGGAAAGGTTCCACAGTGAGACACTCACAGAAGGAGACCTGGTGGATCTCATGAA AAAGTTTGTGGAGGACACAAAAAATGAGGTGCATGAGAGGGAAGGCTGGCCCAACTCACCTTATGGGGTGTCCAAGTTGGGGGTCACGGT CTTATCGAGGATCCTGGCCAGGCGTCTGGATGAGAAGAGGAAAGCTGACAGGATTCTGGTGAATGCGTGCTGCCCAGGACCAGTGAAGAC AGACATGGATGGGAAAGACAGCATCAGGACTGTGGAGGAGGGGGCTGAGACCCCTGTCTACTTGGCCCTCTTGCCTCCAGATGCCACTGA GCCACAAGGCCAGTTGGTCCATGACAAAGTTGTGCAAAACTGGTAAACGTCTGCTTCGGAGCTTGCTGCTTAATAAATGTTGGTGGAATG AATGAATGAA >27757_27757_2_EVA1C-CBR3_EVA1C_chr21_33825816_ENST00000382699_CBR3_chr21_37518374_ENST00000290354_length(amino acids)=153AA_BP=8 MCGSHHLPGRVVNISSLQCLRAFENCSEDLQERFHSETLTEGDLVDLMKKFVEDTKNEVHEREGWPNSPYGVSKLGVTVLSRILARRLDE KRKADRILVNACCPGPVKTDMDGKDSIRTVEEGAETPVYLALLPPDATEPQGQLVHDKVVQNW -------------------------------------------------------------- >27757_27757_3_EVA1C-CBR3_EVA1C_chr21_33825816_ENST00000401402_CBR3_chr21_37518374_ENST00000290354_length(transcript)=1017nt_BP=526nt CCTGGGCTGGCCCGCGCAGGGGAGGAGGCTCTGGCAGCCTGGGCAGGGAGGCGGCGGGGGGCCGCGGAGCCGCTGGCCATCGATTCTCCC CGCCATGTGACGCCGTCCTTAGCCCTGCGACCCCCAGCGCGTCCCGGGCCTGCGCCTCCGCCCCGCCGCGCAGCGCACGATGCTTCTGCC GGGACGCGCACGCCAACCGCCGACGCCCCAGCCCGTGCAGCATCCCGGCCTCCGCCGGCAGGTAGAGCCGCCGGGGCAGCTCCTGCGCCT CTTCTACTGCACTGTCCTGGTCTGCTCCAAAGAGATCTCAGCGCTCACCGACTTCTCTGGTTACCTAACCAAACTCCTGCAAAACCACAC CACCTATGCCTGTGATGGGGACTATTTGAATCTACAGTGCCCTCGGCATTCTACGATAAGTGTCCAATCGGCATTTTATGGGCAAGATTA CCAAATGTGTAGTTCCCAGAAGCCTGCCTCCCAGAGGGAAGACAGCTTAACCTGTGTGGCAGCCACCACCTTCCAGGGAGAGTGGTGAAT ATCAGTAGTTTGCAGTGTTTAAGGGCTTTTGAAAACTGCAGTGAAGATCTGCAGGAAAGGTTCCACAGTGAGACACTCACAGAAGGAGAC CTGGTGGATCTCATGAAAAAGTTTGTGGAGGACACAAAAAATGAGGTGCATGAGAGGGAAGGCTGGCCCAACTCACCTTATGGGGTGTCC AAGTTGGGGGTCACGGTCTTATCGAGGATCCTGGCCAGGCGTCTGGATGAGAAGAGGAAAGCTGACAGGATTCTGGTGAATGCGTGCTGC CCAGGACCAGTGAAGACAGACATGGATGGGAAAGACAGCATCAGGACTGTGGAGGAGGGGGCTGAGACCCCTGTCTACTTGGCCCTCTTG CCTCCAGATGCCACTGAGCCACAAGGCCAGTTGGTCCATGACAAAGTTGTGCAAAACTGGTAAACGTCTGCTTCGGAGCTTGCTGCTTAA TAAATGTTGGTGGAATGAATGAATGAA >27757_27757_3_EVA1C-CBR3_EVA1C_chr21_33825816_ENST00000401402_CBR3_chr21_37518374_ENST00000290354_length(amino acids)=153AA_BP=8 MCGSHHLPGRVVNISSLQCLRAFENCSEDLQERFHSETLTEGDLVDLMKKFVEDTKNEVHEREGWPNSPYGVSKLGVTVLSRILARRLDE KRKADRILVNACCPGPVKTDMDGKDSIRTVEEGAETPVYLALLPPDATEPQGQLVHDKVVQNW -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for EVA1C-CBR3 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for EVA1C-CBR3 |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for EVA1C-CBR3 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |